Multiple sequence alignment - TraesCS6B01G241200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G241200 chr6B 100.000 2765 0 0 1 2765 422971042 422968278 0.000000e+00 5107
1 TraesCS6B01G241200 chr6B 93.121 2166 100 16 1 2131 501069981 501067830 0.000000e+00 3129
2 TraesCS6B01G241200 chr6B 95.622 1462 44 13 1 1443 35800703 35802163 0.000000e+00 2327
3 TraesCS6B01G241200 chr3B 95.382 2144 82 14 1 2129 785309412 785311553 0.000000e+00 3395
4 TraesCS6B01G241200 chr3B 93.155 1461 79 12 1 1443 739877614 739876157 0.000000e+00 2124
5 TraesCS6B01G241200 chrUn 92.904 2142 131 14 1 2129 36266535 36264402 0.000000e+00 3094
6 TraesCS6B01G241200 chrUn 92.354 1661 109 12 482 2129 34746636 34744981 0.000000e+00 2348
7 TraesCS6B01G241200 chr1B 92.269 2160 105 21 1 2127 51964609 51962479 0.000000e+00 3007
8 TraesCS6B01G241200 chr1B 96.610 177 6 0 2126 2302 355408016 355408192 7.490000e-76 294
9 TraesCS6B01G241200 chr3A 92.526 1940 93 25 1 1899 81659865 81661793 0.000000e+00 2732
10 TraesCS6B01G241200 chr3A 98.256 172 3 0 2131 2302 308688698 308688527 4.480000e-78 302
11 TraesCS6B01G241200 chr4B 97.122 1494 39 2 1 1490 532792458 532790965 0.000000e+00 2518
12 TraesCS6B01G241200 chr4B 96.802 813 23 2 1320 2129 17031018 17031830 0.000000e+00 1354
13 TraesCS6B01G241200 chr7B 96.252 1494 46 7 1 1490 67831739 67833226 0.000000e+00 2440
14 TraesCS6B01G241200 chr7B 94.792 864 36 5 1273 2127 67833063 67833926 0.000000e+00 1338
15 TraesCS6B01G241200 chr7B 85.849 106 12 1 2298 2403 114688093 114688195 2.910000e-20 110
16 TraesCS6B01G241200 chr4A 91.716 1509 104 11 1 1494 659244934 659246436 0.000000e+00 2074
17 TraesCS6B01G241200 chr2B 94.342 813 42 4 1318 2127 63807239 63808050 0.000000e+00 1243
18 TraesCS6B01G241200 chr5B 93.529 819 48 3 1317 2131 9055600 9054783 0.000000e+00 1214
19 TraesCS6B01G241200 chr5D 97.674 172 4 0 2131 2302 152758070 152758241 2.080000e-76 296
20 TraesCS6B01G241200 chr5D 95.135 185 8 1 2118 2302 67584593 67584776 9.690000e-75 291
21 TraesCS6B01G241200 chr2D 97.143 175 5 0 2131 2305 180879577 180879403 2.080000e-76 296
22 TraesCS6B01G241200 chr2A 97.674 172 4 0 2131 2302 177014304 177014475 2.080000e-76 296
23 TraesCS6B01G241200 chr2A 97.674 172 4 0 2131 2302 196122777 196122948 2.080000e-76 296
24 TraesCS6B01G241200 chr2A 96.610 177 5 1 2126 2302 132871580 132871755 2.690000e-75 292
25 TraesCS6B01G241200 chr3D 96.610 177 6 0 2126 2302 275109347 275109523 7.490000e-76 294


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G241200 chr6B 422968278 422971042 2764 True 5107 5107 100.000 1 2765 1 chr6B.!!$R1 2764
1 TraesCS6B01G241200 chr6B 501067830 501069981 2151 True 3129 3129 93.121 1 2131 1 chr6B.!!$R2 2130
2 TraesCS6B01G241200 chr6B 35800703 35802163 1460 False 2327 2327 95.622 1 1443 1 chr6B.!!$F1 1442
3 TraesCS6B01G241200 chr3B 785309412 785311553 2141 False 3395 3395 95.382 1 2129 1 chr3B.!!$F1 2128
4 TraesCS6B01G241200 chr3B 739876157 739877614 1457 True 2124 2124 93.155 1 1443 1 chr3B.!!$R1 1442
5 TraesCS6B01G241200 chrUn 36264402 36266535 2133 True 3094 3094 92.904 1 2129 1 chrUn.!!$R2 2128
6 TraesCS6B01G241200 chrUn 34744981 34746636 1655 True 2348 2348 92.354 482 2129 1 chrUn.!!$R1 1647
7 TraesCS6B01G241200 chr1B 51962479 51964609 2130 True 3007 3007 92.269 1 2127 1 chr1B.!!$R1 2126
8 TraesCS6B01G241200 chr3A 81659865 81661793 1928 False 2732 2732 92.526 1 1899 1 chr3A.!!$F1 1898
9 TraesCS6B01G241200 chr4B 532790965 532792458 1493 True 2518 2518 97.122 1 1490 1 chr4B.!!$R1 1489
10 TraesCS6B01G241200 chr4B 17031018 17031830 812 False 1354 1354 96.802 1320 2129 1 chr4B.!!$F1 809
11 TraesCS6B01G241200 chr7B 67831739 67833926 2187 False 1889 2440 95.522 1 2127 2 chr7B.!!$F2 2126
12 TraesCS6B01G241200 chr4A 659244934 659246436 1502 False 2074 2074 91.716 1 1494 1 chr4A.!!$F1 1493
13 TraesCS6B01G241200 chr2B 63807239 63808050 811 False 1243 1243 94.342 1318 2127 1 chr2B.!!$F1 809
14 TraesCS6B01G241200 chr5B 9054783 9055600 817 True 1214 1214 93.529 1317 2131 1 chr5B.!!$R1 814

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
431 435 1.272425 TGGGGGCGAATGAAAGAACAT 60.272 47.619 0.0 0.0 0.0 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2202 2659 0.103208 GGATCTCGCGACCAACTCAT 59.897 55.0 3.71 0.0 0.0 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
431 435 1.272425 TGGGGGCGAATGAAAGAACAT 60.272 47.619 0.00 0.00 0.00 2.71
998 1014 4.888239 AGGAGATGATGAGCTCAAAAATGG 59.112 41.667 22.50 0.00 36.24 3.16
1052 1068 2.504367 CAACGAGGTGAGGAAAATGGT 58.496 47.619 0.00 0.00 0.00 3.55
1073 1131 2.746277 GAACCAAGATGCCGCGGT 60.746 61.111 28.70 7.71 0.00 5.68
1090 1148 0.612453 GGTCGAGGAGAGAAGGGTGT 60.612 60.000 0.00 0.00 0.00 4.16
1275 1334 1.033746 AAAGAGCCATGGTCCGCATG 61.034 55.000 14.67 0.00 0.00 4.06
1276 1335 1.913951 AAGAGCCATGGTCCGCATGA 61.914 55.000 14.67 0.00 32.09 3.07
1631 2051 3.760151 CACACACATTCCCATGAAGATGT 59.240 43.478 0.00 0.00 34.50 3.06
1901 2347 5.175308 TGTCAAATTTCACATGTTCATTGCG 59.825 36.000 0.00 0.00 0.00 4.85
2131 2588 2.744494 GCTGTTGGAGATGCTCTAAGGG 60.744 54.545 0.00 0.00 31.92 3.95
2132 2589 2.768527 CTGTTGGAGATGCTCTAAGGGA 59.231 50.000 0.00 0.00 31.92 4.20
2133 2590 3.387962 TGTTGGAGATGCTCTAAGGGAT 58.612 45.455 0.00 0.00 31.92 3.85
2134 2591 3.782523 TGTTGGAGATGCTCTAAGGGATT 59.217 43.478 0.00 0.00 31.92 3.01
2135 2592 4.133078 GTTGGAGATGCTCTAAGGGATTG 58.867 47.826 0.00 0.00 31.92 2.67
2136 2593 2.707791 TGGAGATGCTCTAAGGGATTGG 59.292 50.000 0.00 0.00 0.00 3.16
2137 2594 2.975489 GGAGATGCTCTAAGGGATTGGA 59.025 50.000 0.00 0.00 0.00 3.53
2138 2595 3.007831 GGAGATGCTCTAAGGGATTGGAG 59.992 52.174 0.00 0.00 0.00 3.86
2139 2596 3.645687 GAGATGCTCTAAGGGATTGGAGT 59.354 47.826 3.75 0.00 0.00 3.85
2140 2597 4.820775 AGATGCTCTAAGGGATTGGAGTA 58.179 43.478 3.75 0.00 0.00 2.59
2141 2598 5.410602 AGATGCTCTAAGGGATTGGAGTAT 58.589 41.667 4.99 4.99 34.75 2.12
2142 2599 5.483583 AGATGCTCTAAGGGATTGGAGTATC 59.516 44.000 18.15 18.15 43.30 2.24
2143 2600 4.556697 TGCTCTAAGGGATTGGAGTATCA 58.443 43.478 3.75 0.00 36.25 2.15
2144 2601 4.345257 TGCTCTAAGGGATTGGAGTATCAC 59.655 45.833 3.75 0.00 36.25 3.06
2145 2602 4.262678 GCTCTAAGGGATTGGAGTATCACC 60.263 50.000 3.75 0.00 36.25 4.02
2146 2603 4.890988 TCTAAGGGATTGGAGTATCACCA 58.109 43.478 0.00 0.00 36.25 4.17
2156 2613 5.086104 TGGAGTATCACCAAAGAACTAGC 57.914 43.478 0.00 0.00 36.25 3.42
2157 2614 4.530553 TGGAGTATCACCAAAGAACTAGCA 59.469 41.667 0.00 0.00 36.25 3.49
2158 2615 5.012664 TGGAGTATCACCAAAGAACTAGCAA 59.987 40.000 0.00 0.00 36.25 3.91
2159 2616 6.116126 GGAGTATCACCAAAGAACTAGCAAT 58.884 40.000 0.00 0.00 36.25 3.56
2160 2617 6.037610 GGAGTATCACCAAAGAACTAGCAATG 59.962 42.308 0.00 0.00 36.25 2.82
2161 2618 5.882557 AGTATCACCAAAGAACTAGCAATGG 59.117 40.000 0.00 0.00 0.00 3.16
2162 2619 4.365514 TCACCAAAGAACTAGCAATGGA 57.634 40.909 7.41 0.00 0.00 3.41
2163 2620 4.072131 TCACCAAAGAACTAGCAATGGAC 58.928 43.478 7.41 0.00 0.00 4.02
2164 2621 3.820467 CACCAAAGAACTAGCAATGGACA 59.180 43.478 7.41 0.00 0.00 4.02
2165 2622 4.074970 ACCAAAGAACTAGCAATGGACAG 58.925 43.478 7.41 0.00 0.00 3.51
2166 2623 3.441572 CCAAAGAACTAGCAATGGACAGG 59.558 47.826 0.00 0.00 0.00 4.00
2167 2624 3.356529 AAGAACTAGCAATGGACAGGG 57.643 47.619 0.00 0.00 0.00 4.45
2168 2625 1.561542 AGAACTAGCAATGGACAGGGG 59.438 52.381 0.00 0.00 0.00 4.79
2169 2626 1.282157 GAACTAGCAATGGACAGGGGT 59.718 52.381 0.00 0.00 0.00 4.95
2170 2627 0.620556 ACTAGCAATGGACAGGGGTG 59.379 55.000 0.00 0.00 0.00 4.61
2171 2628 0.749454 CTAGCAATGGACAGGGGTGC 60.749 60.000 0.00 0.00 35.66 5.01
2172 2629 2.535485 TAGCAATGGACAGGGGTGCG 62.535 60.000 0.00 0.00 40.17 5.34
2173 2630 2.034066 CAATGGACAGGGGTGCGT 59.966 61.111 0.00 0.00 38.35 5.24
2174 2631 2.034066 AATGGACAGGGGTGCGTG 59.966 61.111 0.00 0.00 38.35 5.34
2175 2632 3.567579 AATGGACAGGGGTGCGTGG 62.568 63.158 0.00 0.00 38.35 4.94
2177 2634 3.948719 GGACAGGGGTGCGTGGAA 61.949 66.667 0.00 0.00 0.00 3.53
2178 2635 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
2179 2636 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
2180 2637 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
2181 2638 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
2182 2639 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
2183 2640 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
2184 2641 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
2185 2642 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
2186 2643 1.026718 GGTGCGTGGAAGCTTGCTAT 61.027 55.000 19.34 0.00 38.13 2.97
2187 2644 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
2188 2645 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
2189 2646 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
2190 2647 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
2191 2648 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
2192 2649 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
2193 2650 2.357009 GTGGAAGCTTGCTATCCATGTG 59.643 50.000 19.34 0.00 44.55 3.21
2194 2651 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
2195 2652 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
2196 2653 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
2197 2654 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
2198 2655 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
2199 2656 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
2200 2657 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
2201 2658 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
2202 2659 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
2203 2660 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
2204 2661 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
2205 2662 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
2206 2663 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
2207 2664 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
2208 2665 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
2209 2666 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
2217 2674 3.786101 CCATGAGTTGGTCGCGAG 58.214 61.111 10.24 0.00 40.99 5.03
2218 2675 1.215382 CCATGAGTTGGTCGCGAGA 59.785 57.895 10.24 0.00 40.99 4.04
2219 2676 0.179100 CCATGAGTTGGTCGCGAGAT 60.179 55.000 10.24 0.00 45.19 2.75
2220 2677 1.203928 CATGAGTTGGTCGCGAGATC 58.796 55.000 10.24 2.63 45.19 2.75
2221 2678 0.103208 ATGAGTTGGTCGCGAGATCC 59.897 55.000 10.24 8.44 41.73 3.36
2222 2679 0.965866 TGAGTTGGTCGCGAGATCCT 60.966 55.000 10.24 3.07 41.73 3.24
2223 2680 1.022735 GAGTTGGTCGCGAGATCCTA 58.977 55.000 10.24 0.75 41.73 2.94
2224 2681 1.609555 GAGTTGGTCGCGAGATCCTAT 59.390 52.381 10.24 0.00 41.73 2.57
2225 2682 1.338337 AGTTGGTCGCGAGATCCTATG 59.662 52.381 10.24 0.00 41.73 2.23
2226 2683 0.673985 TTGGTCGCGAGATCCTATGG 59.326 55.000 10.24 0.00 41.73 2.74
2227 2684 1.179174 TGGTCGCGAGATCCTATGGG 61.179 60.000 10.24 0.00 41.73 4.00
2228 2685 1.179814 GGTCGCGAGATCCTATGGGT 61.180 60.000 10.24 0.00 45.19 4.51
2229 2686 0.674534 GTCGCGAGATCCTATGGGTT 59.325 55.000 10.24 0.00 45.19 4.11
2230 2687 1.068741 GTCGCGAGATCCTATGGGTTT 59.931 52.381 10.24 0.00 45.19 3.27
2231 2688 1.340248 TCGCGAGATCCTATGGGTTTC 59.660 52.381 3.71 0.00 33.31 2.78
2232 2689 1.068588 CGCGAGATCCTATGGGTTTCA 59.931 52.381 0.00 0.00 0.00 2.69
2233 2690 2.484889 GCGAGATCCTATGGGTTTCAC 58.515 52.381 0.00 0.00 0.00 3.18
2234 2691 2.807108 GCGAGATCCTATGGGTTTCACC 60.807 54.545 0.00 0.00 37.60 4.02
2235 2692 2.700897 CGAGATCCTATGGGTTTCACCT 59.299 50.000 0.00 0.00 38.64 4.00
2236 2693 3.243907 CGAGATCCTATGGGTTTCACCTC 60.244 52.174 0.00 0.00 38.64 3.85
2237 2694 3.970640 GAGATCCTATGGGTTTCACCTCT 59.029 47.826 0.00 0.00 38.64 3.69
2238 2695 5.148502 GAGATCCTATGGGTTTCACCTCTA 58.851 45.833 0.00 0.00 38.64 2.43
2239 2696 5.151454 AGATCCTATGGGTTTCACCTCTAG 58.849 45.833 0.00 0.00 38.64 2.43
2240 2697 3.039011 TCCTATGGGTTTCACCTCTAGC 58.961 50.000 0.00 0.00 38.64 3.42
2241 2698 2.104963 CCTATGGGTTTCACCTCTAGCC 59.895 54.545 0.00 0.00 38.64 3.93
2242 2699 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
2243 2700 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
2244 2701 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
2245 2702 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
2246 2703 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
2247 2704 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
2248 2705 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
2249 2706 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
2250 2707 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
2251 2708 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
2252 2709 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
2253 2710 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
2254 2711 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
2255 2712 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
2256 2713 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
2257 2714 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
2269 2726 5.592104 CAACTTGTTTGGGACTAAAGGTT 57.408 39.130 0.00 0.00 0.00 3.50
2270 2727 5.972935 CAACTTGTTTGGGACTAAAGGTTT 58.027 37.500 0.00 0.00 0.00 3.27
2271 2728 6.403049 CAACTTGTTTGGGACTAAAGGTTTT 58.597 36.000 0.00 0.00 0.00 2.43
2272 2729 5.972935 ACTTGTTTGGGACTAAAGGTTTTG 58.027 37.500 0.00 0.00 0.00 2.44
2273 2730 5.482526 ACTTGTTTGGGACTAAAGGTTTTGT 59.517 36.000 0.00 0.00 0.00 2.83
2274 2731 6.014070 ACTTGTTTGGGACTAAAGGTTTTGTT 60.014 34.615 0.00 0.00 0.00 2.83
2275 2732 5.725362 TGTTTGGGACTAAAGGTTTTGTTG 58.275 37.500 0.00 0.00 0.00 3.33
2276 2733 5.246429 TGTTTGGGACTAAAGGTTTTGTTGT 59.754 36.000 0.00 0.00 0.00 3.32
2277 2734 6.167685 GTTTGGGACTAAAGGTTTTGTTGTT 58.832 36.000 0.00 0.00 0.00 2.83
2278 2735 5.331876 TGGGACTAAAGGTTTTGTTGTTG 57.668 39.130 0.00 0.00 0.00 3.33
2279 2736 4.773149 TGGGACTAAAGGTTTTGTTGTTGT 59.227 37.500 0.00 0.00 0.00 3.32
2280 2737 5.246429 TGGGACTAAAGGTTTTGTTGTTGTT 59.754 36.000 0.00 0.00 0.00 2.83
2281 2738 5.579119 GGGACTAAAGGTTTTGTTGTTGTTG 59.421 40.000 0.00 0.00 0.00 3.33
2282 2739 6.160684 GGACTAAAGGTTTTGTTGTTGTTGT 58.839 36.000 0.00 0.00 0.00 3.32
2283 2740 6.647481 GGACTAAAGGTTTTGTTGTTGTTGTT 59.353 34.615 0.00 0.00 0.00 2.83
2284 2741 7.359681 GGACTAAAGGTTTTGTTGTTGTTGTTG 60.360 37.037 0.00 0.00 0.00 3.33
2285 2742 6.987404 ACTAAAGGTTTTGTTGTTGTTGTTGT 59.013 30.769 0.00 0.00 0.00 3.32
2286 2743 6.685527 AAAGGTTTTGTTGTTGTTGTTGTT 57.314 29.167 0.00 0.00 0.00 2.83
2287 2744 5.665381 AGGTTTTGTTGTTGTTGTTGTTG 57.335 34.783 0.00 0.00 0.00 3.33
2288 2745 5.119694 AGGTTTTGTTGTTGTTGTTGTTGT 58.880 33.333 0.00 0.00 0.00 3.32
2289 2746 5.586643 AGGTTTTGTTGTTGTTGTTGTTGTT 59.413 32.000 0.00 0.00 0.00 2.83
2290 2747 5.678919 GGTTTTGTTGTTGTTGTTGTTGTTG 59.321 36.000 0.00 0.00 0.00 3.33
2291 2748 6.251549 GTTTTGTTGTTGTTGTTGTTGTTGT 58.748 32.000 0.00 0.00 0.00 3.32
2292 2749 6.422776 TTTGTTGTTGTTGTTGTTGTTGTT 57.577 29.167 0.00 0.00 0.00 2.83
2293 2750 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2294 2751 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2295 2752 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2296 2753 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2297 2754 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2298 2755 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2299 2756 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2300 2757 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2301 2758 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2302 2759 6.533723 TGTTGTTGTTGTTGTTGTTGTTGTTA 59.466 30.769 0.00 0.00 0.00 2.41
2303 2760 7.224753 TGTTGTTGTTGTTGTTGTTGTTGTTAT 59.775 29.630 0.00 0.00 0.00 1.89
2304 2761 7.339732 TGTTGTTGTTGTTGTTGTTGTTATC 57.660 32.000 0.00 0.00 0.00 1.75
2305 2762 6.366332 TGTTGTTGTTGTTGTTGTTGTTATCC 59.634 34.615 0.00 0.00 0.00 2.59
2306 2763 5.096169 TGTTGTTGTTGTTGTTGTTATCCG 58.904 37.500 0.00 0.00 0.00 4.18
2307 2764 5.106277 TGTTGTTGTTGTTGTTGTTATCCGA 60.106 36.000 0.00 0.00 0.00 4.55
2308 2765 5.562506 TGTTGTTGTTGTTGTTATCCGAA 57.437 34.783 0.00 0.00 0.00 4.30
2309 2766 5.333513 TGTTGTTGTTGTTGTTATCCGAAC 58.666 37.500 0.00 0.00 0.00 3.95
2310 2767 4.555348 TGTTGTTGTTGTTATCCGAACC 57.445 40.909 0.00 0.00 0.00 3.62
2311 2768 3.945921 TGTTGTTGTTGTTATCCGAACCA 59.054 39.130 0.00 0.00 0.00 3.67
2312 2769 4.035792 TGTTGTTGTTGTTATCCGAACCAG 59.964 41.667 0.00 0.00 0.00 4.00
2313 2770 4.074627 TGTTGTTGTTATCCGAACCAGA 57.925 40.909 0.00 0.00 0.00 3.86
2314 2771 4.062293 TGTTGTTGTTATCCGAACCAGAG 58.938 43.478 0.00 0.00 0.00 3.35
2315 2772 4.062991 GTTGTTGTTATCCGAACCAGAGT 58.937 43.478 0.00 0.00 0.00 3.24
2316 2773 4.345859 TGTTGTTATCCGAACCAGAGTT 57.654 40.909 0.00 0.00 39.54 3.01
2317 2774 5.471556 TGTTGTTATCCGAACCAGAGTTA 57.528 39.130 0.00 0.00 35.94 2.24
2318 2775 5.475719 TGTTGTTATCCGAACCAGAGTTAG 58.524 41.667 0.00 0.00 35.94 2.34
2319 2776 5.011329 TGTTGTTATCCGAACCAGAGTTAGT 59.989 40.000 0.00 0.00 35.94 2.24
2320 2777 5.068234 TGTTATCCGAACCAGAGTTAGTG 57.932 43.478 0.00 0.00 35.94 2.74
2321 2778 4.081862 TGTTATCCGAACCAGAGTTAGTGG 60.082 45.833 0.00 0.00 41.30 4.00
2322 2779 2.297698 TCCGAACCAGAGTTAGTGGA 57.702 50.000 0.00 0.00 38.57 4.02
2323 2780 2.168496 TCCGAACCAGAGTTAGTGGAG 58.832 52.381 0.00 0.00 38.57 3.86
2324 2781 1.893801 CCGAACCAGAGTTAGTGGAGT 59.106 52.381 0.00 0.00 38.57 3.85
2325 2782 3.087031 CCGAACCAGAGTTAGTGGAGTA 58.913 50.000 0.00 0.00 38.57 2.59
2326 2783 3.128938 CCGAACCAGAGTTAGTGGAGTAG 59.871 52.174 0.00 0.00 38.57 2.57
2327 2784 3.128938 CGAACCAGAGTTAGTGGAGTAGG 59.871 52.174 0.00 0.00 38.57 3.18
2328 2785 3.829728 ACCAGAGTTAGTGGAGTAGGT 57.170 47.619 0.00 0.00 38.57 3.08
2329 2786 4.129317 ACCAGAGTTAGTGGAGTAGGTT 57.871 45.455 0.00 0.00 38.57 3.50
2330 2787 4.490706 ACCAGAGTTAGTGGAGTAGGTTT 58.509 43.478 0.00 0.00 38.57 3.27
2331 2788 4.527427 ACCAGAGTTAGTGGAGTAGGTTTC 59.473 45.833 0.00 0.00 38.57 2.78
2332 2789 4.773149 CCAGAGTTAGTGGAGTAGGTTTCT 59.227 45.833 0.00 0.00 37.23 2.52
2333 2790 5.336849 CCAGAGTTAGTGGAGTAGGTTTCTG 60.337 48.000 0.00 0.00 37.23 3.02
2334 2791 4.773149 AGAGTTAGTGGAGTAGGTTTCTGG 59.227 45.833 0.00 0.00 0.00 3.86
2335 2792 3.838903 AGTTAGTGGAGTAGGTTTCTGGG 59.161 47.826 0.00 0.00 0.00 4.45
2336 2793 1.657804 AGTGGAGTAGGTTTCTGGGG 58.342 55.000 0.00 0.00 0.00 4.96
2337 2794 1.132495 AGTGGAGTAGGTTTCTGGGGT 60.132 52.381 0.00 0.00 0.00 4.95
2338 2795 1.703513 GTGGAGTAGGTTTCTGGGGTT 59.296 52.381 0.00 0.00 0.00 4.11
2339 2796 2.107726 GTGGAGTAGGTTTCTGGGGTTT 59.892 50.000 0.00 0.00 0.00 3.27
2340 2797 2.787035 TGGAGTAGGTTTCTGGGGTTTT 59.213 45.455 0.00 0.00 0.00 2.43
2341 2798 3.181437 TGGAGTAGGTTTCTGGGGTTTTC 60.181 47.826 0.00 0.00 0.00 2.29
2342 2799 3.181437 GGAGTAGGTTTCTGGGGTTTTCA 60.181 47.826 0.00 0.00 0.00 2.69
2343 2800 4.466827 GAGTAGGTTTCTGGGGTTTTCAA 58.533 43.478 0.00 0.00 0.00 2.69
2344 2801 4.470602 AGTAGGTTTCTGGGGTTTTCAAG 58.529 43.478 0.00 0.00 0.00 3.02
2345 2802 3.680777 AGGTTTCTGGGGTTTTCAAGA 57.319 42.857 0.00 0.00 0.00 3.02
2346 2803 4.199002 AGGTTTCTGGGGTTTTCAAGAT 57.801 40.909 0.00 0.00 0.00 2.40
2347 2804 4.556697 AGGTTTCTGGGGTTTTCAAGATT 58.443 39.130 0.00 0.00 0.00 2.40
2348 2805 5.711698 AGGTTTCTGGGGTTTTCAAGATTA 58.288 37.500 0.00 0.00 0.00 1.75
2349 2806 6.322931 AGGTTTCTGGGGTTTTCAAGATTAT 58.677 36.000 0.00 0.00 0.00 1.28
2350 2807 6.211384 AGGTTTCTGGGGTTTTCAAGATTATG 59.789 38.462 0.00 0.00 0.00 1.90
2351 2808 6.014584 GGTTTCTGGGGTTTTCAAGATTATGT 60.015 38.462 0.00 0.00 0.00 2.29
2352 2809 7.177744 GGTTTCTGGGGTTTTCAAGATTATGTA 59.822 37.037 0.00 0.00 0.00 2.29
2353 2810 8.749354 GTTTCTGGGGTTTTCAAGATTATGTAT 58.251 33.333 0.00 0.00 0.00 2.29
2354 2811 7.880160 TCTGGGGTTTTCAAGATTATGTATG 57.120 36.000 0.00 0.00 0.00 2.39
2355 2812 6.833416 TCTGGGGTTTTCAAGATTATGTATGG 59.167 38.462 0.00 0.00 0.00 2.74
2356 2813 6.498538 TGGGGTTTTCAAGATTATGTATGGT 58.501 36.000 0.00 0.00 0.00 3.55
2357 2814 6.957020 TGGGGTTTTCAAGATTATGTATGGTT 59.043 34.615 0.00 0.00 0.00 3.67
2358 2815 7.456269 TGGGGTTTTCAAGATTATGTATGGTTT 59.544 33.333 0.00 0.00 0.00 3.27
2359 2816 8.318412 GGGGTTTTCAAGATTATGTATGGTTTT 58.682 33.333 0.00 0.00 0.00 2.43
2360 2817 9.150348 GGGTTTTCAAGATTATGTATGGTTTTG 57.850 33.333 0.00 0.00 0.00 2.44
2361 2818 9.705290 GGTTTTCAAGATTATGTATGGTTTTGT 57.295 29.630 0.00 0.00 0.00 2.83
2369 2826 9.574516 AGATTATGTATGGTTTTGTTATCTCCC 57.425 33.333 0.00 0.00 0.00 4.30
2370 2827 9.574516 GATTATGTATGGTTTTGTTATCTCCCT 57.425 33.333 0.00 0.00 0.00 4.20
2371 2828 8.746052 TTATGTATGGTTTTGTTATCTCCCTG 57.254 34.615 0.00 0.00 0.00 4.45
2372 2829 4.947388 TGTATGGTTTTGTTATCTCCCTGC 59.053 41.667 0.00 0.00 0.00 4.85
2373 2830 3.517296 TGGTTTTGTTATCTCCCTGCA 57.483 42.857 0.00 0.00 0.00 4.41
2374 2831 3.838565 TGGTTTTGTTATCTCCCTGCAA 58.161 40.909 0.00 0.00 0.00 4.08
2375 2832 3.826157 TGGTTTTGTTATCTCCCTGCAAG 59.174 43.478 0.00 0.00 0.00 4.01
2376 2833 3.826729 GGTTTTGTTATCTCCCTGCAAGT 59.173 43.478 0.00 0.00 0.00 3.16
2377 2834 4.280929 GGTTTTGTTATCTCCCTGCAAGTT 59.719 41.667 0.00 0.00 0.00 2.66
2378 2835 5.221441 GGTTTTGTTATCTCCCTGCAAGTTT 60.221 40.000 0.00 0.00 0.00 2.66
2379 2836 6.015772 GGTTTTGTTATCTCCCTGCAAGTTTA 60.016 38.462 0.00 0.00 0.00 2.01
2380 2837 7.309805 GGTTTTGTTATCTCCCTGCAAGTTTAT 60.310 37.037 0.00 0.00 0.00 1.40
2381 2838 6.757897 TTGTTATCTCCCTGCAAGTTTATG 57.242 37.500 0.00 0.00 0.00 1.90
2382 2839 5.815581 TGTTATCTCCCTGCAAGTTTATGT 58.184 37.500 0.00 0.00 0.00 2.29
2383 2840 6.953101 TGTTATCTCCCTGCAAGTTTATGTA 58.047 36.000 0.00 0.00 0.00 2.29
2384 2841 6.821665 TGTTATCTCCCTGCAAGTTTATGTAC 59.178 38.462 0.00 0.00 0.00 2.90
2385 2842 5.700402 ATCTCCCTGCAAGTTTATGTACT 57.300 39.130 0.00 0.00 0.00 2.73
2386 2843 4.832248 TCTCCCTGCAAGTTTATGTACTG 58.168 43.478 0.00 0.00 0.00 2.74
2387 2844 3.343617 TCCCTGCAAGTTTATGTACTGC 58.656 45.455 0.00 0.00 0.00 4.40
2388 2845 2.095853 CCCTGCAAGTTTATGTACTGCG 59.904 50.000 0.00 0.00 0.00 5.18
2389 2846 2.095853 CCTGCAAGTTTATGTACTGCGG 59.904 50.000 3.49 3.49 32.83 5.69
2390 2847 3.000041 CTGCAAGTTTATGTACTGCGGA 59.000 45.455 0.00 0.00 33.87 5.54
2391 2848 3.605634 TGCAAGTTTATGTACTGCGGAT 58.394 40.909 0.00 0.00 0.00 4.18
2392 2849 3.373748 TGCAAGTTTATGTACTGCGGATG 59.626 43.478 0.00 0.00 0.00 3.51
2393 2850 3.374058 GCAAGTTTATGTACTGCGGATGT 59.626 43.478 0.00 0.00 0.00 3.06
2394 2851 4.569162 GCAAGTTTATGTACTGCGGATGTA 59.431 41.667 0.00 0.00 0.00 2.29
2395 2852 5.064198 GCAAGTTTATGTACTGCGGATGTAA 59.936 40.000 0.00 0.00 0.00 2.41
2396 2853 6.238374 GCAAGTTTATGTACTGCGGATGTAAT 60.238 38.462 0.00 0.00 0.00 1.89
2397 2854 7.678690 GCAAGTTTATGTACTGCGGATGTAATT 60.679 37.037 0.00 0.00 0.00 1.40
2398 2855 8.822855 CAAGTTTATGTACTGCGGATGTAATTA 58.177 33.333 0.00 0.00 0.00 1.40
2399 2856 8.951787 AGTTTATGTACTGCGGATGTAATTAA 57.048 30.769 0.00 0.00 0.00 1.40
2400 2857 8.823818 AGTTTATGTACTGCGGATGTAATTAAC 58.176 33.333 0.00 0.00 0.00 2.01
2401 2858 8.823818 GTTTATGTACTGCGGATGTAATTAACT 58.176 33.333 0.00 0.00 0.00 2.24
2402 2859 8.583810 TTATGTACTGCGGATGTAATTAACTC 57.416 34.615 0.00 0.00 0.00 3.01
2403 2860 5.968254 TGTACTGCGGATGTAATTAACTCA 58.032 37.500 0.00 0.00 0.00 3.41
2404 2861 6.399743 TGTACTGCGGATGTAATTAACTCAA 58.600 36.000 0.00 0.00 0.00 3.02
2405 2862 6.874664 TGTACTGCGGATGTAATTAACTCAAA 59.125 34.615 0.00 0.00 0.00 2.69
2406 2863 6.811253 ACTGCGGATGTAATTAACTCAAAA 57.189 33.333 0.00 0.00 0.00 2.44
2407 2864 7.209471 ACTGCGGATGTAATTAACTCAAAAA 57.791 32.000 0.00 0.00 0.00 1.94
2408 2865 7.826690 ACTGCGGATGTAATTAACTCAAAAAT 58.173 30.769 0.00 0.00 0.00 1.82
2409 2866 7.754924 ACTGCGGATGTAATTAACTCAAAAATG 59.245 33.333 0.00 0.00 0.00 2.32
2410 2867 7.598278 TGCGGATGTAATTAACTCAAAAATGT 58.402 30.769 0.00 0.00 0.00 2.71
2411 2868 8.085296 TGCGGATGTAATTAACTCAAAAATGTT 58.915 29.630 0.00 0.00 0.00 2.71
2412 2869 8.921670 GCGGATGTAATTAACTCAAAAATGTTT 58.078 29.630 0.00 0.00 0.00 2.83
2416 2873 9.777297 ATGTAATTAACTCAAAAATGTTTGGCT 57.223 25.926 8.51 0.00 43.70 4.75
2417 2874 9.039870 TGTAATTAACTCAAAAATGTTTGGCTG 57.960 29.630 8.51 2.66 43.70 4.85
2418 2875 9.040939 GTAATTAACTCAAAAATGTTTGGCTGT 57.959 29.630 8.51 3.23 43.70 4.40
2419 2876 6.900568 TTAACTCAAAAATGTTTGGCTGTG 57.099 33.333 8.51 0.00 43.70 3.66
2420 2877 3.795877 ACTCAAAAATGTTTGGCTGTGG 58.204 40.909 8.51 0.00 43.70 4.17
2421 2878 3.197549 ACTCAAAAATGTTTGGCTGTGGT 59.802 39.130 8.51 0.00 43.70 4.16
2422 2879 4.190772 CTCAAAAATGTTTGGCTGTGGTT 58.809 39.130 8.51 0.00 43.70 3.67
2423 2880 4.187694 TCAAAAATGTTTGGCTGTGGTTC 58.812 39.130 8.51 0.00 43.70 3.62
2424 2881 3.902881 AAAATGTTTGGCTGTGGTTCA 57.097 38.095 0.00 0.00 0.00 3.18
2425 2882 4.420522 AAAATGTTTGGCTGTGGTTCAT 57.579 36.364 0.00 0.00 0.00 2.57
2426 2883 3.389925 AATGTTTGGCTGTGGTTCATG 57.610 42.857 0.00 0.00 0.00 3.07
2427 2884 0.388659 TGTTTGGCTGTGGTTCATGC 59.611 50.000 0.00 0.00 0.00 4.06
2428 2885 0.675633 GTTTGGCTGTGGTTCATGCT 59.324 50.000 0.00 0.00 0.00 3.79
2429 2886 1.885887 GTTTGGCTGTGGTTCATGCTA 59.114 47.619 0.00 0.00 0.00 3.49
2430 2887 1.825090 TTGGCTGTGGTTCATGCTAG 58.175 50.000 0.00 0.00 0.00 3.42
2431 2888 0.692476 TGGCTGTGGTTCATGCTAGT 59.308 50.000 0.00 0.00 0.00 2.57
2432 2889 1.339055 TGGCTGTGGTTCATGCTAGTC 60.339 52.381 0.00 0.00 0.00 2.59
2433 2890 1.065854 GGCTGTGGTTCATGCTAGTCT 60.066 52.381 0.00 0.00 0.00 3.24
2434 2891 2.168521 GGCTGTGGTTCATGCTAGTCTA 59.831 50.000 0.00 0.00 0.00 2.59
2435 2892 3.452474 GCTGTGGTTCATGCTAGTCTAG 58.548 50.000 2.18 2.18 0.00 2.43
2436 2893 3.118956 GCTGTGGTTCATGCTAGTCTAGT 60.119 47.826 8.68 0.00 0.00 2.57
2437 2894 4.098044 GCTGTGGTTCATGCTAGTCTAGTA 59.902 45.833 8.68 4.40 0.00 1.82
2438 2895 5.734786 GCTGTGGTTCATGCTAGTCTAGTAG 60.735 48.000 8.68 0.00 0.00 2.57
2439 2896 5.506708 TGTGGTTCATGCTAGTCTAGTAGA 58.493 41.667 8.68 0.00 0.00 2.59
2440 2897 6.129874 TGTGGTTCATGCTAGTCTAGTAGAT 58.870 40.000 2.51 0.00 0.00 1.98
2441 2898 7.287810 TGTGGTTCATGCTAGTCTAGTAGATA 58.712 38.462 2.51 0.00 0.00 1.98
2442 2899 7.778382 TGTGGTTCATGCTAGTCTAGTAGATAA 59.222 37.037 2.51 0.00 0.00 1.75
2443 2900 8.630917 GTGGTTCATGCTAGTCTAGTAGATAAA 58.369 37.037 2.51 0.00 0.00 1.40
2444 2901 9.368416 TGGTTCATGCTAGTCTAGTAGATAAAT 57.632 33.333 2.51 0.00 0.00 1.40
2449 2906 9.352784 CATGCTAGTCTAGTAGATAAATTCAGC 57.647 37.037 2.51 5.62 0.00 4.26
2450 2907 8.465273 TGCTAGTCTAGTAGATAAATTCAGCA 57.535 34.615 2.51 7.84 0.00 4.41
2451 2908 9.083422 TGCTAGTCTAGTAGATAAATTCAGCAT 57.917 33.333 2.51 0.00 0.00 3.79
2452 2909 9.352784 GCTAGTCTAGTAGATAAATTCAGCATG 57.647 37.037 2.51 0.00 37.54 4.06
2453 2910 9.853555 CTAGTCTAGTAGATAAATTCAGCATGG 57.146 37.037 2.51 0.00 36.16 3.66
2454 2911 8.484214 AGTCTAGTAGATAAATTCAGCATGGA 57.516 34.615 2.51 0.00 36.16 3.41
2455 2912 9.099071 AGTCTAGTAGATAAATTCAGCATGGAT 57.901 33.333 2.51 0.00 34.00 3.41
2459 2916 8.558973 AGTAGATAAATTCAGCATGGATTAGC 57.441 34.615 0.00 0.00 45.58 3.09
2460 2917 8.159447 AGTAGATAAATTCAGCATGGATTAGCA 58.841 33.333 0.00 0.00 45.58 3.49
2461 2918 7.450124 AGATAAATTCAGCATGGATTAGCAG 57.550 36.000 0.00 0.00 45.58 4.24
2462 2919 7.229308 AGATAAATTCAGCATGGATTAGCAGA 58.771 34.615 0.00 0.00 45.58 4.26
2463 2920 7.722728 AGATAAATTCAGCATGGATTAGCAGAA 59.277 33.333 0.00 0.00 45.58 3.02
2464 2921 6.534475 AAATTCAGCATGGATTAGCAGAAA 57.466 33.333 0.00 0.00 45.58 2.52
2465 2922 6.534475 AATTCAGCATGGATTAGCAGAAAA 57.466 33.333 0.00 0.00 44.14 2.29
2466 2923 6.726490 ATTCAGCATGGATTAGCAGAAAAT 57.274 33.333 0.00 0.00 39.22 1.82
2467 2924 6.534475 TTCAGCATGGATTAGCAGAAAATT 57.466 33.333 0.00 0.00 34.08 1.82
2468 2925 6.534475 TCAGCATGGATTAGCAGAAAATTT 57.466 33.333 0.00 0.00 36.16 1.82
2469 2926 6.938507 TCAGCATGGATTAGCAGAAAATTTT 58.061 32.000 2.28 2.28 36.16 1.82
2470 2927 8.065473 TCAGCATGGATTAGCAGAAAATTTTA 57.935 30.769 2.75 0.00 36.16 1.52
2471 2928 8.192774 TCAGCATGGATTAGCAGAAAATTTTAG 58.807 33.333 2.75 1.02 36.16 1.85
2472 2929 7.977853 CAGCATGGATTAGCAGAAAATTTTAGT 59.022 33.333 2.75 0.00 0.00 2.24
2473 2930 8.534496 AGCATGGATTAGCAGAAAATTTTAGTT 58.466 29.630 2.75 0.78 0.00 2.24
2474 2931 8.811378 GCATGGATTAGCAGAAAATTTTAGTTC 58.189 33.333 2.75 0.00 0.00 3.01
2481 2938 9.528018 TTAGCAGAAAATTTTAGTTCTTTGGTG 57.472 29.630 2.75 0.00 31.66 4.17
2482 2939 7.781056 AGCAGAAAATTTTAGTTCTTTGGTGA 58.219 30.769 2.75 0.00 31.66 4.02
2483 2940 7.706607 AGCAGAAAATTTTAGTTCTTTGGTGAC 59.293 33.333 2.75 0.00 31.66 3.67
2484 2941 7.706607 GCAGAAAATTTTAGTTCTTTGGTGACT 59.293 33.333 2.75 0.00 31.66 3.41
2485 2942 9.586435 CAGAAAATTTTAGTTCTTTGGTGACTT 57.414 29.630 2.75 0.00 31.66 3.01
2523 2980 6.583912 TGTAGCAAGCTTAAATAACTAGCG 57.416 37.500 0.00 0.00 39.82 4.26
2524 2981 4.537936 AGCAAGCTTAAATAACTAGCGC 57.462 40.909 0.00 0.00 39.82 5.92
2525 2982 3.938963 AGCAAGCTTAAATAACTAGCGCA 59.061 39.130 11.47 0.00 39.82 6.09
2526 2983 4.394920 AGCAAGCTTAAATAACTAGCGCAA 59.605 37.500 11.47 0.00 39.82 4.85
2527 2984 4.730521 GCAAGCTTAAATAACTAGCGCAAG 59.269 41.667 11.47 1.55 39.82 4.01
2528 2985 5.447279 GCAAGCTTAAATAACTAGCGCAAGA 60.447 40.000 11.47 0.00 39.82 3.02
2529 2986 6.542852 CAAGCTTAAATAACTAGCGCAAGAA 58.457 36.000 11.47 0.00 39.82 2.52
2530 2987 6.927294 AGCTTAAATAACTAGCGCAAGAAT 57.073 33.333 11.47 0.00 39.82 2.40
2531 2988 7.321745 AGCTTAAATAACTAGCGCAAGAATT 57.678 32.000 11.47 0.00 39.82 2.17
2532 2989 8.433421 AGCTTAAATAACTAGCGCAAGAATTA 57.567 30.769 11.47 0.84 39.82 1.40
2533 2990 9.057089 AGCTTAAATAACTAGCGCAAGAATTAT 57.943 29.630 11.47 3.41 39.82 1.28
2537 2994 8.671384 AAATAACTAGCGCAAGAATTATACCA 57.329 30.769 11.47 0.00 43.02 3.25
2538 2995 8.671384 AATAACTAGCGCAAGAATTATACCAA 57.329 30.769 11.47 0.00 43.02 3.67
2539 2996 5.986004 ACTAGCGCAAGAATTATACCAAC 57.014 39.130 11.47 0.00 43.02 3.77
2540 2997 5.671493 ACTAGCGCAAGAATTATACCAACT 58.329 37.500 11.47 0.00 43.02 3.16
2541 2998 6.113411 ACTAGCGCAAGAATTATACCAACTT 58.887 36.000 11.47 0.00 43.02 2.66
2542 2999 5.485662 AGCGCAAGAATTATACCAACTTC 57.514 39.130 11.47 0.00 43.02 3.01
2543 3000 4.335594 AGCGCAAGAATTATACCAACTTCC 59.664 41.667 11.47 0.00 43.02 3.46
2544 3001 4.335594 GCGCAAGAATTATACCAACTTCCT 59.664 41.667 0.30 0.00 43.02 3.36
2545 3002 5.163652 GCGCAAGAATTATACCAACTTCCTT 60.164 40.000 0.30 0.00 43.02 3.36
2546 3003 6.625081 GCGCAAGAATTATACCAACTTCCTTT 60.625 38.462 0.30 0.00 43.02 3.11
2547 3004 6.747280 CGCAAGAATTATACCAACTTCCTTTG 59.253 38.462 0.00 0.00 43.02 2.77
2548 3005 8.101779 CGCAAGAATTATACCAACTTCCTTTGG 61.102 40.741 0.19 0.19 46.59 3.28
2553 3010 3.131850 CCAACTTCCTTTGGTGGCT 57.868 52.632 0.00 0.00 41.18 4.75
2554 3011 1.413118 CCAACTTCCTTTGGTGGCTT 58.587 50.000 0.00 0.00 41.18 4.35
2555 3012 1.341209 CCAACTTCCTTTGGTGGCTTC 59.659 52.381 0.00 0.00 41.18 3.86
2556 3013 2.031120 CAACTTCCTTTGGTGGCTTCA 58.969 47.619 0.00 0.00 0.00 3.02
2557 3014 1.986882 ACTTCCTTTGGTGGCTTCAG 58.013 50.000 0.00 0.00 0.00 3.02
2558 3015 0.600057 CTTCCTTTGGTGGCTTCAGC 59.400 55.000 0.00 0.00 39.19 4.26
2559 3016 0.106268 TTCCTTTGGTGGCTTCAGCA 60.106 50.000 0.30 0.00 45.78 4.41
2560 3017 0.112995 TCCTTTGGTGGCTTCAGCAT 59.887 50.000 0.30 0.00 46.52 3.79
2561 3018 1.354031 TCCTTTGGTGGCTTCAGCATA 59.646 47.619 0.30 0.00 46.52 3.14
2562 3019 2.170166 CCTTTGGTGGCTTCAGCATAA 58.830 47.619 0.30 0.00 46.52 1.90
2563 3020 2.562298 CCTTTGGTGGCTTCAGCATAAA 59.438 45.455 0.30 0.00 46.52 1.40
2564 3021 3.367703 CCTTTGGTGGCTTCAGCATAAAG 60.368 47.826 0.30 5.51 46.52 1.85
2565 3022 2.877097 TGGTGGCTTCAGCATAAAGA 57.123 45.000 0.30 0.00 43.06 2.52
2566 3023 2.436417 TGGTGGCTTCAGCATAAAGAC 58.564 47.619 0.30 0.00 43.06 3.01
2567 3024 2.224744 TGGTGGCTTCAGCATAAAGACA 60.225 45.455 0.30 0.00 43.06 3.41
2568 3025 3.019564 GGTGGCTTCAGCATAAAGACAT 58.980 45.455 4.81 0.00 43.40 3.06
2569 3026 3.065925 GGTGGCTTCAGCATAAAGACATC 59.934 47.826 4.81 1.02 43.40 3.06
2570 3027 3.065925 GTGGCTTCAGCATAAAGACATCC 59.934 47.826 4.81 0.00 43.40 3.51
2571 3028 2.289002 GGCTTCAGCATAAAGACATCCG 59.711 50.000 0.30 0.00 44.36 4.18
2572 3029 3.198068 GCTTCAGCATAAAGACATCCGA 58.802 45.455 0.00 0.00 41.59 4.55
2573 3030 3.623060 GCTTCAGCATAAAGACATCCGAA 59.377 43.478 0.00 0.00 41.59 4.30
2574 3031 4.274459 GCTTCAGCATAAAGACATCCGAAT 59.726 41.667 0.00 0.00 41.59 3.34
2575 3032 5.220931 GCTTCAGCATAAAGACATCCGAATT 60.221 40.000 0.00 0.00 41.59 2.17
2576 3033 6.017934 GCTTCAGCATAAAGACATCCGAATTA 60.018 38.462 0.00 0.00 41.59 1.40
2577 3034 6.844696 TCAGCATAAAGACATCCGAATTAC 57.155 37.500 0.00 0.00 0.00 1.89
2578 3035 6.582636 TCAGCATAAAGACATCCGAATTACT 58.417 36.000 0.00 0.00 0.00 2.24
2579 3036 6.479990 TCAGCATAAAGACATCCGAATTACTG 59.520 38.462 0.00 0.00 0.00 2.74
2580 3037 5.760253 AGCATAAAGACATCCGAATTACTGG 59.240 40.000 0.00 0.00 0.00 4.00
2581 3038 5.560953 GCATAAAGACATCCGAATTACTGGC 60.561 44.000 0.00 0.00 0.00 4.85
2582 3039 3.914426 AAGACATCCGAATTACTGGCT 57.086 42.857 0.00 0.00 0.00 4.75
2583 3040 5.353394 AAAGACATCCGAATTACTGGCTA 57.647 39.130 0.00 0.00 0.00 3.93
2584 3041 4.592485 AGACATCCGAATTACTGGCTAG 57.408 45.455 0.00 0.00 0.00 3.42
2585 3042 4.215908 AGACATCCGAATTACTGGCTAGA 58.784 43.478 3.17 0.00 0.00 2.43
2586 3043 4.835615 AGACATCCGAATTACTGGCTAGAT 59.164 41.667 3.17 0.00 0.00 1.98
2587 3044 5.047660 AGACATCCGAATTACTGGCTAGATC 60.048 44.000 3.17 0.00 0.00 2.75
2588 3045 4.835615 ACATCCGAATTACTGGCTAGATCT 59.164 41.667 3.17 0.00 0.00 2.75
2589 3046 6.010850 ACATCCGAATTACTGGCTAGATCTA 58.989 40.000 3.17 1.69 0.00 1.98
2590 3047 6.493802 ACATCCGAATTACTGGCTAGATCTAA 59.506 38.462 3.17 0.00 0.00 2.10
2591 3048 7.179338 ACATCCGAATTACTGGCTAGATCTAAT 59.821 37.037 3.17 0.00 0.00 1.73
2592 3049 8.687242 CATCCGAATTACTGGCTAGATCTAATA 58.313 37.037 3.17 0.00 0.00 0.98
2593 3050 8.645814 TCCGAATTACTGGCTAGATCTAATAA 57.354 34.615 3.17 0.00 0.00 1.40
2594 3051 9.085645 TCCGAATTACTGGCTAGATCTAATAAA 57.914 33.333 3.17 0.00 0.00 1.40
2595 3052 9.141400 CCGAATTACTGGCTAGATCTAATAAAC 57.859 37.037 3.17 0.00 0.00 2.01
2596 3053 9.692749 CGAATTACTGGCTAGATCTAATAAACA 57.307 33.333 3.17 0.00 0.00 2.83
2599 3056 9.988815 ATTACTGGCTAGATCTAATAAACACAG 57.011 33.333 3.17 7.03 0.00 3.66
2600 3057 7.661536 ACTGGCTAGATCTAATAAACACAGA 57.338 36.000 3.17 0.00 0.00 3.41
2601 3058 8.079211 ACTGGCTAGATCTAATAAACACAGAA 57.921 34.615 3.17 0.00 0.00 3.02
2602 3059 8.200792 ACTGGCTAGATCTAATAAACACAGAAG 58.799 37.037 3.17 0.00 0.00 2.85
2603 3060 8.079211 TGGCTAGATCTAATAAACACAGAAGT 57.921 34.615 3.57 0.00 0.00 3.01
2604 3061 8.540388 TGGCTAGATCTAATAAACACAGAAGTT 58.460 33.333 3.57 0.00 0.00 2.66
2683 3140 9.696917 AAAACAATATACCTTCAAGCTCAAAAG 57.303 29.630 0.00 0.00 0.00 2.27
2684 3141 8.635765 AACAATATACCTTCAAGCTCAAAAGA 57.364 30.769 0.00 0.00 0.00 2.52
2685 3142 8.814038 ACAATATACCTTCAAGCTCAAAAGAT 57.186 30.769 0.00 0.00 0.00 2.40
2686 3143 8.680903 ACAATATACCTTCAAGCTCAAAAGATG 58.319 33.333 0.00 0.00 0.00 2.90
2687 3144 8.680903 CAATATACCTTCAAGCTCAAAAGATGT 58.319 33.333 0.00 0.00 0.00 3.06
2688 3145 9.905713 AATATACCTTCAAGCTCAAAAGATGTA 57.094 29.630 0.00 0.00 0.00 2.29
2689 3146 9.905713 ATATACCTTCAAGCTCAAAAGATGTAA 57.094 29.630 0.00 0.00 0.00 2.41
2690 3147 6.959639 ACCTTCAAGCTCAAAAGATGTAAA 57.040 33.333 0.00 0.00 0.00 2.01
2691 3148 6.739112 ACCTTCAAGCTCAAAAGATGTAAAC 58.261 36.000 0.00 0.00 0.00 2.01
2692 3149 6.321181 ACCTTCAAGCTCAAAAGATGTAAACA 59.679 34.615 0.00 0.00 0.00 2.83
2693 3150 7.147915 ACCTTCAAGCTCAAAAGATGTAAACAA 60.148 33.333 0.00 0.00 0.00 2.83
2694 3151 7.706179 CCTTCAAGCTCAAAAGATGTAAACAAA 59.294 33.333 0.00 0.00 0.00 2.83
2695 3152 7.985634 TCAAGCTCAAAAGATGTAAACAAAC 57.014 32.000 0.00 0.00 0.00 2.93
2696 3153 7.771183 TCAAGCTCAAAAGATGTAAACAAACT 58.229 30.769 0.00 0.00 0.00 2.66
2697 3154 7.701924 TCAAGCTCAAAAGATGTAAACAAACTG 59.298 33.333 0.00 0.00 0.00 3.16
2698 3155 7.100458 AGCTCAAAAGATGTAAACAAACTGT 57.900 32.000 0.00 0.00 0.00 3.55
2699 3156 8.220755 AGCTCAAAAGATGTAAACAAACTGTA 57.779 30.769 0.00 0.00 0.00 2.74
2700 3157 8.682710 AGCTCAAAAGATGTAAACAAACTGTAA 58.317 29.630 0.00 0.00 0.00 2.41
2701 3158 8.958043 GCTCAAAAGATGTAAACAAACTGTAAG 58.042 33.333 0.00 0.00 42.29 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
166 170 3.560896 TGACATGTATGCATCATCGTTGG 59.439 43.478 0.19 0.00 31.99 3.77
540 544 4.220602 GCCACTTGGGTTAATCTTGTCAAT 59.779 41.667 0.00 0.00 39.65 2.57
998 1014 3.171277 GCGTTGACAATTGCTTCCATAC 58.829 45.455 5.05 0.00 0.00 2.39
1052 1068 0.742990 CGCGGCATCTTGGTTCCTTA 60.743 55.000 0.00 0.00 0.00 2.69
1073 1131 0.677098 CGACACCCTTCTCTCCTCGA 60.677 60.000 0.00 0.00 0.00 4.04
1090 1148 2.440430 CTTCCTCTCCTCGGCCGA 60.440 66.667 29.03 29.03 0.00 5.54
1631 2051 2.548057 GTGTTGGCAAGATCTTCAACGA 59.452 45.455 24.08 15.66 41.45 3.85
1740 2172 2.433436 TCATCTTCCTCGTCTTCGTCA 58.567 47.619 0.00 0.00 38.33 4.35
2131 2588 6.258947 GCTAGTTCTTTGGTGATACTCCAATC 59.741 42.308 6.20 0.00 43.25 2.67
2132 2589 6.116126 GCTAGTTCTTTGGTGATACTCCAAT 58.884 40.000 6.20 0.00 43.25 3.16
2133 2590 5.012664 TGCTAGTTCTTTGGTGATACTCCAA 59.987 40.000 0.00 0.00 42.29 3.53
2134 2591 4.530553 TGCTAGTTCTTTGGTGATACTCCA 59.469 41.667 0.00 0.00 0.00 3.86
2135 2592 5.086104 TGCTAGTTCTTTGGTGATACTCC 57.914 43.478 0.00 0.00 0.00 3.85
2136 2593 6.037610 CCATTGCTAGTTCTTTGGTGATACTC 59.962 42.308 0.00 0.00 0.00 2.59
2137 2594 5.882557 CCATTGCTAGTTCTTTGGTGATACT 59.117 40.000 0.00 0.00 0.00 2.12
2138 2595 5.880332 TCCATTGCTAGTTCTTTGGTGATAC 59.120 40.000 0.00 0.00 0.00 2.24
2139 2596 5.880332 GTCCATTGCTAGTTCTTTGGTGATA 59.120 40.000 0.00 0.00 0.00 2.15
2140 2597 4.702131 GTCCATTGCTAGTTCTTTGGTGAT 59.298 41.667 0.00 0.00 0.00 3.06
2141 2598 4.072131 GTCCATTGCTAGTTCTTTGGTGA 58.928 43.478 0.00 0.00 0.00 4.02
2142 2599 3.820467 TGTCCATTGCTAGTTCTTTGGTG 59.180 43.478 0.00 0.00 0.00 4.17
2143 2600 4.074970 CTGTCCATTGCTAGTTCTTTGGT 58.925 43.478 0.00 0.00 0.00 3.67
2144 2601 3.441572 CCTGTCCATTGCTAGTTCTTTGG 59.558 47.826 0.00 0.00 0.00 3.28
2145 2602 3.441572 CCCTGTCCATTGCTAGTTCTTTG 59.558 47.826 0.00 0.00 0.00 2.77
2146 2603 3.562176 CCCCTGTCCATTGCTAGTTCTTT 60.562 47.826 0.00 0.00 0.00 2.52
2147 2604 2.025887 CCCCTGTCCATTGCTAGTTCTT 60.026 50.000 0.00 0.00 0.00 2.52
2148 2605 1.561542 CCCCTGTCCATTGCTAGTTCT 59.438 52.381 0.00 0.00 0.00 3.01
2149 2606 1.282157 ACCCCTGTCCATTGCTAGTTC 59.718 52.381 0.00 0.00 0.00 3.01
2150 2607 1.004745 CACCCCTGTCCATTGCTAGTT 59.995 52.381 0.00 0.00 0.00 2.24
2151 2608 0.620556 CACCCCTGTCCATTGCTAGT 59.379 55.000 0.00 0.00 0.00 2.57
2152 2609 0.749454 GCACCCCTGTCCATTGCTAG 60.749 60.000 0.00 0.00 0.00 3.42
2153 2610 1.302949 GCACCCCTGTCCATTGCTA 59.697 57.895 0.00 0.00 0.00 3.49
2154 2611 2.036256 GCACCCCTGTCCATTGCT 59.964 61.111 0.00 0.00 0.00 3.91
2155 2612 3.443045 CGCACCCCTGTCCATTGC 61.443 66.667 0.00 0.00 0.00 3.56
2156 2613 2.034066 ACGCACCCCTGTCCATTG 59.966 61.111 0.00 0.00 0.00 2.82
2157 2614 2.034066 CACGCACCCCTGTCCATT 59.966 61.111 0.00 0.00 0.00 3.16
2158 2615 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
2160 2617 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
2161 2618 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
2162 2619 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
2163 2620 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
2164 2621 3.570212 AAGCTTCCACGCACCCCT 61.570 61.111 0.00 0.00 0.00 4.79
2165 2622 3.365265 CAAGCTTCCACGCACCCC 61.365 66.667 0.00 0.00 0.00 4.95
2166 2623 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
2167 2624 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
2168 2625 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
2169 2626 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
2170 2627 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
2171 2628 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
2172 2629 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
2173 2630 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
2174 2631 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
2175 2632 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
2176 2633 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
2177 2634 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
2178 2635 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
2179 2636 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
2180 2637 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
2181 2638 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
2182 2639 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
2183 2640 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
2184 2641 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
2185 2642 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
2186 2643 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
2187 2644 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
2188 2645 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
2189 2646 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
2190 2647 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
2191 2648 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
2192 2649 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
2193 2650 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
2201 2658 1.203928 GATCTCGCGACCAACTCATG 58.796 55.000 3.71 0.00 0.00 3.07
2202 2659 0.103208 GGATCTCGCGACCAACTCAT 59.897 55.000 3.71 0.00 0.00 2.90
2203 2660 0.965866 AGGATCTCGCGACCAACTCA 60.966 55.000 15.70 0.00 0.00 3.41
2204 2661 1.022735 TAGGATCTCGCGACCAACTC 58.977 55.000 15.70 4.01 0.00 3.01
2205 2662 1.338337 CATAGGATCTCGCGACCAACT 59.662 52.381 15.70 9.82 0.00 3.16
2206 2663 1.603172 CCATAGGATCTCGCGACCAAC 60.603 57.143 15.70 2.85 0.00 3.77
2207 2664 0.673985 CCATAGGATCTCGCGACCAA 59.326 55.000 15.70 0.43 0.00 3.67
2208 2665 1.179174 CCCATAGGATCTCGCGACCA 61.179 60.000 15.70 1.19 33.47 4.02
2209 2666 1.179814 ACCCATAGGATCTCGCGACC 61.180 60.000 3.71 5.18 36.73 4.79
2210 2667 0.674534 AACCCATAGGATCTCGCGAC 59.325 55.000 3.71 0.00 36.73 5.19
2211 2668 1.340248 GAAACCCATAGGATCTCGCGA 59.660 52.381 9.26 9.26 36.73 5.87
2212 2669 1.068588 TGAAACCCATAGGATCTCGCG 59.931 52.381 0.00 0.00 36.73 5.87
2213 2670 2.484889 GTGAAACCCATAGGATCTCGC 58.515 52.381 0.00 0.00 36.73 5.03
2227 2684 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
2228 2685 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
2229 2686 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
2230 2687 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
2231 2688 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
2232 2689 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
2233 2690 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
2234 2691 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
2235 2692 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2236 2693 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
2237 2694 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
2238 2695 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
2247 2704 5.592104 AACCTTTAGTCCCAAACAAGTTG 57.408 39.130 0.00 0.00 36.94 3.16
2248 2705 6.014070 ACAAAACCTTTAGTCCCAAACAAGTT 60.014 34.615 0.00 0.00 0.00 2.66
2249 2706 5.482526 ACAAAACCTTTAGTCCCAAACAAGT 59.517 36.000 0.00 0.00 0.00 3.16
2250 2707 5.972935 ACAAAACCTTTAGTCCCAAACAAG 58.027 37.500 0.00 0.00 0.00 3.16
2251 2708 6.166982 CAACAAAACCTTTAGTCCCAAACAA 58.833 36.000 0.00 0.00 0.00 2.83
2252 2709 5.246429 ACAACAAAACCTTTAGTCCCAAACA 59.754 36.000 0.00 0.00 0.00 2.83
2253 2710 5.726397 ACAACAAAACCTTTAGTCCCAAAC 58.274 37.500 0.00 0.00 0.00 2.93
2254 2711 6.166982 CAACAACAAAACCTTTAGTCCCAAA 58.833 36.000 0.00 0.00 0.00 3.28
2255 2712 5.246429 ACAACAACAAAACCTTTAGTCCCAA 59.754 36.000 0.00 0.00 0.00 4.12
2256 2713 4.773149 ACAACAACAAAACCTTTAGTCCCA 59.227 37.500 0.00 0.00 0.00 4.37
2257 2714 5.333299 ACAACAACAAAACCTTTAGTCCC 57.667 39.130 0.00 0.00 0.00 4.46
2258 2715 6.160684 ACAACAACAACAAAACCTTTAGTCC 58.839 36.000 0.00 0.00 0.00 3.85
2259 2716 7.170151 ACAACAACAACAACAAAACCTTTAGTC 59.830 33.333 0.00 0.00 0.00 2.59
2260 2717 6.987404 ACAACAACAACAACAAAACCTTTAGT 59.013 30.769 0.00 0.00 0.00 2.24
2261 2718 7.414814 ACAACAACAACAACAAAACCTTTAG 57.585 32.000 0.00 0.00 0.00 1.85
2262 2719 7.280205 ACAACAACAACAACAACAAAACCTTTA 59.720 29.630 0.00 0.00 0.00 1.85
2263 2720 6.094186 ACAACAACAACAACAACAAAACCTTT 59.906 30.769 0.00 0.00 0.00 3.11
2264 2721 5.586643 ACAACAACAACAACAACAAAACCTT 59.413 32.000 0.00 0.00 0.00 3.50
2265 2722 5.119694 ACAACAACAACAACAACAAAACCT 58.880 33.333 0.00 0.00 0.00 3.50
2266 2723 5.411083 ACAACAACAACAACAACAAAACC 57.589 34.783 0.00 0.00 0.00 3.27
2267 2724 6.251549 ACAACAACAACAACAACAACAAAAC 58.748 32.000 0.00 0.00 0.00 2.43
2268 2725 6.422776 ACAACAACAACAACAACAACAAAA 57.577 29.167 0.00 0.00 0.00 2.44
2269 2726 6.128282 ACAACAACAACAACAACAACAACAAA 60.128 30.769 0.00 0.00 0.00 2.83
2270 2727 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2271 2728 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2272 2729 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2273 2730 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2274 2731 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2275 2732 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2276 2733 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2277 2734 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2278 2735 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2279 2736 7.095607 GGATAACAACAACAACAACAACAACAA 60.096 33.333 0.00 0.00 0.00 2.83
2280 2737 6.366332 GGATAACAACAACAACAACAACAACA 59.634 34.615 0.00 0.00 0.00 3.33
2281 2738 6.453134 CGGATAACAACAACAACAACAACAAC 60.453 38.462 0.00 0.00 0.00 3.32
2282 2739 5.573282 CGGATAACAACAACAACAACAACAA 59.427 36.000 0.00 0.00 0.00 2.83
2283 2740 5.096169 CGGATAACAACAACAACAACAACA 58.904 37.500 0.00 0.00 0.00 3.33
2284 2741 5.333513 TCGGATAACAACAACAACAACAAC 58.666 37.500 0.00 0.00 0.00 3.32
2285 2742 5.562506 TCGGATAACAACAACAACAACAA 57.437 34.783 0.00 0.00 0.00 2.83
2286 2743 5.333513 GTTCGGATAACAACAACAACAACA 58.666 37.500 0.00 0.00 0.00 3.33
2287 2744 4.736307 GGTTCGGATAACAACAACAACAAC 59.264 41.667 0.00 0.00 0.00 3.32
2288 2745 4.398358 TGGTTCGGATAACAACAACAACAA 59.602 37.500 0.00 0.00 0.00 2.83
2289 2746 3.945921 TGGTTCGGATAACAACAACAACA 59.054 39.130 0.00 0.00 0.00 3.33
2290 2747 4.273969 TCTGGTTCGGATAACAACAACAAC 59.726 41.667 0.00 0.00 0.00 3.32
2291 2748 4.452825 TCTGGTTCGGATAACAACAACAA 58.547 39.130 0.00 0.00 0.00 2.83
2292 2749 4.062293 CTCTGGTTCGGATAACAACAACA 58.938 43.478 0.00 0.00 0.00 3.33
2293 2750 4.062991 ACTCTGGTTCGGATAACAACAAC 58.937 43.478 0.00 0.00 0.00 3.32
2294 2751 4.345859 ACTCTGGTTCGGATAACAACAA 57.654 40.909 0.00 0.00 0.00 2.83
2295 2752 4.345859 AACTCTGGTTCGGATAACAACA 57.654 40.909 0.00 0.00 0.00 3.33
2296 2753 5.347907 CACTAACTCTGGTTCGGATAACAAC 59.652 44.000 0.00 0.00 36.92 3.32
2297 2754 5.475719 CACTAACTCTGGTTCGGATAACAA 58.524 41.667 0.00 0.00 36.92 2.83
2298 2755 4.081862 CCACTAACTCTGGTTCGGATAACA 60.082 45.833 0.00 0.00 36.92 2.41
2299 2756 4.159135 TCCACTAACTCTGGTTCGGATAAC 59.841 45.833 0.00 0.00 36.92 1.89
2300 2757 4.346730 TCCACTAACTCTGGTTCGGATAA 58.653 43.478 0.00 0.00 36.92 1.75
2301 2758 3.952323 CTCCACTAACTCTGGTTCGGATA 59.048 47.826 0.00 0.00 36.92 2.59
2302 2759 2.761208 CTCCACTAACTCTGGTTCGGAT 59.239 50.000 0.00 0.00 36.92 4.18
2303 2760 2.168496 CTCCACTAACTCTGGTTCGGA 58.832 52.381 0.00 0.00 36.92 4.55
2304 2761 1.893801 ACTCCACTAACTCTGGTTCGG 59.106 52.381 0.00 0.00 36.92 4.30
2305 2762 3.128938 CCTACTCCACTAACTCTGGTTCG 59.871 52.174 0.00 0.00 36.92 3.95
2306 2763 4.087907 ACCTACTCCACTAACTCTGGTTC 58.912 47.826 0.00 0.00 36.92 3.62
2307 2764 4.129317 ACCTACTCCACTAACTCTGGTT 57.871 45.455 0.00 0.00 39.26 3.67
2308 2765 3.829728 ACCTACTCCACTAACTCTGGT 57.170 47.619 0.00 0.00 0.00 4.00
2309 2766 4.773149 AGAAACCTACTCCACTAACTCTGG 59.227 45.833 0.00 0.00 0.00 3.86
2310 2767 5.336849 CCAGAAACCTACTCCACTAACTCTG 60.337 48.000 0.00 0.00 0.00 3.35
2311 2768 4.773149 CCAGAAACCTACTCCACTAACTCT 59.227 45.833 0.00 0.00 0.00 3.24
2312 2769 4.081586 CCCAGAAACCTACTCCACTAACTC 60.082 50.000 0.00 0.00 0.00 3.01
2313 2770 3.838903 CCCAGAAACCTACTCCACTAACT 59.161 47.826 0.00 0.00 0.00 2.24
2314 2771 3.055312 CCCCAGAAACCTACTCCACTAAC 60.055 52.174 0.00 0.00 0.00 2.34
2315 2772 3.178865 CCCCAGAAACCTACTCCACTAA 58.821 50.000 0.00 0.00 0.00 2.24
2316 2773 2.113052 ACCCCAGAAACCTACTCCACTA 59.887 50.000 0.00 0.00 0.00 2.74
2317 2774 1.132495 ACCCCAGAAACCTACTCCACT 60.132 52.381 0.00 0.00 0.00 4.00
2318 2775 1.359168 ACCCCAGAAACCTACTCCAC 58.641 55.000 0.00 0.00 0.00 4.02
2319 2776 2.127651 AACCCCAGAAACCTACTCCA 57.872 50.000 0.00 0.00 0.00 3.86
2320 2777 3.181437 TGAAAACCCCAGAAACCTACTCC 60.181 47.826 0.00 0.00 0.00 3.85
2321 2778 4.094830 TGAAAACCCCAGAAACCTACTC 57.905 45.455 0.00 0.00 0.00 2.59
2322 2779 4.167307 TCTTGAAAACCCCAGAAACCTACT 59.833 41.667 0.00 0.00 0.00 2.57
2323 2780 4.466827 TCTTGAAAACCCCAGAAACCTAC 58.533 43.478 0.00 0.00 0.00 3.18
2324 2781 4.799715 TCTTGAAAACCCCAGAAACCTA 57.200 40.909 0.00 0.00 0.00 3.08
2325 2782 3.680777 TCTTGAAAACCCCAGAAACCT 57.319 42.857 0.00 0.00 0.00 3.50
2326 2783 4.955811 AATCTTGAAAACCCCAGAAACC 57.044 40.909 0.00 0.00 0.00 3.27
2327 2784 6.993079 ACATAATCTTGAAAACCCCAGAAAC 58.007 36.000 0.00 0.00 0.00 2.78
2328 2785 8.748412 CATACATAATCTTGAAAACCCCAGAAA 58.252 33.333 0.00 0.00 0.00 2.52
2329 2786 7.341769 CCATACATAATCTTGAAAACCCCAGAA 59.658 37.037 0.00 0.00 0.00 3.02
2330 2787 6.833416 CCATACATAATCTTGAAAACCCCAGA 59.167 38.462 0.00 0.00 0.00 3.86
2331 2788 6.607198 ACCATACATAATCTTGAAAACCCCAG 59.393 38.462 0.00 0.00 0.00 4.45
2332 2789 6.498538 ACCATACATAATCTTGAAAACCCCA 58.501 36.000 0.00 0.00 0.00 4.96
2333 2790 7.418337 AACCATACATAATCTTGAAAACCCC 57.582 36.000 0.00 0.00 0.00 4.95
2334 2791 9.150348 CAAAACCATACATAATCTTGAAAACCC 57.850 33.333 0.00 0.00 0.00 4.11
2335 2792 9.705290 ACAAAACCATACATAATCTTGAAAACC 57.295 29.630 0.00 0.00 0.00 3.27
2343 2800 9.574516 GGGAGATAACAAAACCATACATAATCT 57.425 33.333 0.00 0.00 0.00 2.40
2344 2801 9.574516 AGGGAGATAACAAAACCATACATAATC 57.425 33.333 0.00 0.00 0.00 1.75
2345 2802 9.354673 CAGGGAGATAACAAAACCATACATAAT 57.645 33.333 0.00 0.00 0.00 1.28
2346 2803 7.284489 GCAGGGAGATAACAAAACCATACATAA 59.716 37.037 0.00 0.00 0.00 1.90
2347 2804 6.770785 GCAGGGAGATAACAAAACCATACATA 59.229 38.462 0.00 0.00 0.00 2.29
2348 2805 5.594317 GCAGGGAGATAACAAAACCATACAT 59.406 40.000 0.00 0.00 0.00 2.29
2349 2806 4.947388 GCAGGGAGATAACAAAACCATACA 59.053 41.667 0.00 0.00 0.00 2.29
2350 2807 4.947388 TGCAGGGAGATAACAAAACCATAC 59.053 41.667 0.00 0.00 0.00 2.39
2351 2808 5.186256 TGCAGGGAGATAACAAAACCATA 57.814 39.130 0.00 0.00 0.00 2.74
2352 2809 4.046286 TGCAGGGAGATAACAAAACCAT 57.954 40.909 0.00 0.00 0.00 3.55
2353 2810 3.517296 TGCAGGGAGATAACAAAACCA 57.483 42.857 0.00 0.00 0.00 3.67
2354 2811 3.826729 ACTTGCAGGGAGATAACAAAACC 59.173 43.478 0.00 0.00 0.00 3.27
2355 2812 5.453567 AACTTGCAGGGAGATAACAAAAC 57.546 39.130 0.00 0.00 0.00 2.43
2356 2813 7.232534 ACATAAACTTGCAGGGAGATAACAAAA 59.767 33.333 0.00 0.00 0.00 2.44
2357 2814 6.719370 ACATAAACTTGCAGGGAGATAACAAA 59.281 34.615 0.00 0.00 0.00 2.83
2358 2815 6.245408 ACATAAACTTGCAGGGAGATAACAA 58.755 36.000 0.00 0.00 0.00 2.83
2359 2816 5.815581 ACATAAACTTGCAGGGAGATAACA 58.184 37.500 0.00 0.00 0.00 2.41
2360 2817 7.011482 CAGTACATAAACTTGCAGGGAGATAAC 59.989 40.741 0.00 0.00 0.00 1.89
2361 2818 7.047891 CAGTACATAAACTTGCAGGGAGATAA 58.952 38.462 0.00 0.00 0.00 1.75
2362 2819 6.582636 CAGTACATAAACTTGCAGGGAGATA 58.417 40.000 0.00 0.00 0.00 1.98
2363 2820 5.431765 CAGTACATAAACTTGCAGGGAGAT 58.568 41.667 0.00 0.00 0.00 2.75
2364 2821 4.832248 CAGTACATAAACTTGCAGGGAGA 58.168 43.478 0.00 0.00 0.00 3.71
2365 2822 3.375299 GCAGTACATAAACTTGCAGGGAG 59.625 47.826 0.00 0.00 0.00 4.30
2366 2823 3.343617 GCAGTACATAAACTTGCAGGGA 58.656 45.455 0.00 0.00 0.00 4.20
2367 2824 2.095853 CGCAGTACATAAACTTGCAGGG 59.904 50.000 0.00 0.00 0.00 4.45
2368 2825 2.095853 CCGCAGTACATAAACTTGCAGG 59.904 50.000 0.00 0.00 0.00 4.85
2369 2826 3.000041 TCCGCAGTACATAAACTTGCAG 59.000 45.455 0.00 0.00 0.00 4.41
2370 2827 3.046968 TCCGCAGTACATAAACTTGCA 57.953 42.857 0.00 0.00 0.00 4.08
2371 2828 3.374058 ACATCCGCAGTACATAAACTTGC 59.626 43.478 0.00 0.00 0.00 4.01
2372 2829 6.656314 TTACATCCGCAGTACATAAACTTG 57.344 37.500 0.00 0.00 0.00 3.16
2373 2830 7.859325 AATTACATCCGCAGTACATAAACTT 57.141 32.000 0.00 0.00 0.00 2.66
2374 2831 8.823818 GTTAATTACATCCGCAGTACATAAACT 58.176 33.333 0.00 0.00 0.00 2.66
2375 2832 8.823818 AGTTAATTACATCCGCAGTACATAAAC 58.176 33.333 0.00 0.00 0.00 2.01
2376 2833 8.951787 AGTTAATTACATCCGCAGTACATAAA 57.048 30.769 0.00 0.00 0.00 1.40
2377 2834 8.198778 TGAGTTAATTACATCCGCAGTACATAA 58.801 33.333 0.00 0.00 0.00 1.90
2378 2835 7.718525 TGAGTTAATTACATCCGCAGTACATA 58.281 34.615 0.00 0.00 0.00 2.29
2379 2836 6.578944 TGAGTTAATTACATCCGCAGTACAT 58.421 36.000 0.00 0.00 0.00 2.29
2380 2837 5.968254 TGAGTTAATTACATCCGCAGTACA 58.032 37.500 0.00 0.00 0.00 2.90
2381 2838 6.897259 TTGAGTTAATTACATCCGCAGTAC 57.103 37.500 0.00 0.00 0.00 2.73
2382 2839 7.908827 TTTTGAGTTAATTACATCCGCAGTA 57.091 32.000 0.00 0.00 0.00 2.74
2383 2840 6.811253 TTTTGAGTTAATTACATCCGCAGT 57.189 33.333 0.00 0.00 0.00 4.40
2384 2841 7.754924 ACATTTTTGAGTTAATTACATCCGCAG 59.245 33.333 0.00 0.00 0.00 5.18
2385 2842 7.598278 ACATTTTTGAGTTAATTACATCCGCA 58.402 30.769 0.00 0.00 0.00 5.69
2386 2843 8.460831 AACATTTTTGAGTTAATTACATCCGC 57.539 30.769 0.00 0.00 0.00 5.54
2390 2847 9.777297 AGCCAAACATTTTTGAGTTAATTACAT 57.223 25.926 5.90 0.00 44.38 2.29
2391 2848 9.039870 CAGCCAAACATTTTTGAGTTAATTACA 57.960 29.630 5.90 0.00 44.38 2.41
2392 2849 9.040939 ACAGCCAAACATTTTTGAGTTAATTAC 57.959 29.630 5.90 0.00 44.38 1.89
2393 2850 9.039870 CACAGCCAAACATTTTTGAGTTAATTA 57.960 29.630 5.90 0.00 44.38 1.40
2394 2851 7.012232 CCACAGCCAAACATTTTTGAGTTAATT 59.988 33.333 5.90 0.00 44.38 1.40
2395 2852 6.482973 CCACAGCCAAACATTTTTGAGTTAAT 59.517 34.615 5.90 0.00 44.38 1.40
2396 2853 5.814705 CCACAGCCAAACATTTTTGAGTTAA 59.185 36.000 5.90 0.00 44.38 2.01
2397 2854 5.105146 ACCACAGCCAAACATTTTTGAGTTA 60.105 36.000 5.90 0.00 44.38 2.24
2398 2855 4.190772 CCACAGCCAAACATTTTTGAGTT 58.809 39.130 5.90 0.00 44.38 3.01
2399 2856 3.197549 ACCACAGCCAAACATTTTTGAGT 59.802 39.130 5.90 0.00 44.38 3.41
2400 2857 3.795877 ACCACAGCCAAACATTTTTGAG 58.204 40.909 5.90 0.00 44.38 3.02
2401 2858 3.902881 ACCACAGCCAAACATTTTTGA 57.097 38.095 5.90 0.00 44.38 2.69
2402 2859 3.937706 TGAACCACAGCCAAACATTTTTG 59.062 39.130 0.00 0.00 41.71 2.44
2403 2860 4.213564 TGAACCACAGCCAAACATTTTT 57.786 36.364 0.00 0.00 0.00 1.94
2404 2861 3.902881 TGAACCACAGCCAAACATTTT 57.097 38.095 0.00 0.00 0.00 1.82
2405 2862 3.731089 CATGAACCACAGCCAAACATTT 58.269 40.909 0.00 0.00 0.00 2.32
2406 2863 2.548493 GCATGAACCACAGCCAAACATT 60.548 45.455 0.00 0.00 0.00 2.71
2407 2864 1.001181 GCATGAACCACAGCCAAACAT 59.999 47.619 0.00 0.00 0.00 2.71
2408 2865 0.388659 GCATGAACCACAGCCAAACA 59.611 50.000 0.00 0.00 0.00 2.83
2409 2866 0.675633 AGCATGAACCACAGCCAAAC 59.324 50.000 0.00 0.00 0.00 2.93
2410 2867 2.161855 CTAGCATGAACCACAGCCAAA 58.838 47.619 0.00 0.00 0.00 3.28
2411 2868 1.073763 ACTAGCATGAACCACAGCCAA 59.926 47.619 0.00 0.00 0.00 4.52
2412 2869 0.692476 ACTAGCATGAACCACAGCCA 59.308 50.000 0.00 0.00 0.00 4.75
2413 2870 1.065854 AGACTAGCATGAACCACAGCC 60.066 52.381 0.00 0.00 0.00 4.85
2414 2871 2.393271 AGACTAGCATGAACCACAGC 57.607 50.000 0.00 0.00 0.00 4.40
2415 2872 4.727507 ACTAGACTAGCATGAACCACAG 57.272 45.455 9.52 0.00 0.00 3.66
2416 2873 5.506708 TCTACTAGACTAGCATGAACCACA 58.493 41.667 9.52 0.00 0.00 4.17
2417 2874 6.642707 ATCTACTAGACTAGCATGAACCAC 57.357 41.667 9.52 0.00 0.00 4.16
2418 2875 8.762481 TTTATCTACTAGACTAGCATGAACCA 57.238 34.615 9.52 0.00 0.00 3.67
2423 2880 9.352784 GCTGAATTTATCTACTAGACTAGCATG 57.647 37.037 9.52 0.62 0.00 4.06
2424 2881 9.083422 TGCTGAATTTATCTACTAGACTAGCAT 57.917 33.333 9.52 2.45 0.00 3.79
2425 2882 8.465273 TGCTGAATTTATCTACTAGACTAGCA 57.535 34.615 9.52 0.00 0.00 3.49
2426 2883 9.352784 CATGCTGAATTTATCTACTAGACTAGC 57.647 37.037 9.52 0.00 0.00 3.42
2427 2884 9.853555 CCATGCTGAATTTATCTACTAGACTAG 57.146 37.037 8.00 8.00 0.00 2.57
2428 2885 9.588096 TCCATGCTGAATTTATCTACTAGACTA 57.412 33.333 0.00 0.00 0.00 2.59
2429 2886 8.484214 TCCATGCTGAATTTATCTACTAGACT 57.516 34.615 0.00 0.00 0.00 3.24
2430 2887 9.717942 AATCCATGCTGAATTTATCTACTAGAC 57.282 33.333 0.00 0.00 0.00 2.59
2433 2890 9.658799 GCTAATCCATGCTGAATTTATCTACTA 57.341 33.333 0.00 0.00 0.00 1.82
2434 2891 8.159447 TGCTAATCCATGCTGAATTTATCTACT 58.841 33.333 0.00 0.00 0.00 2.57
2435 2892 8.327941 TGCTAATCCATGCTGAATTTATCTAC 57.672 34.615 0.00 0.00 0.00 2.59
2436 2893 8.377799 TCTGCTAATCCATGCTGAATTTATCTA 58.622 33.333 0.00 0.00 34.96 1.98
2437 2894 7.229308 TCTGCTAATCCATGCTGAATTTATCT 58.771 34.615 0.00 0.00 34.96 1.98
2438 2895 7.444629 TCTGCTAATCCATGCTGAATTTATC 57.555 36.000 0.00 0.00 34.96 1.75
2439 2896 7.828508 TTCTGCTAATCCATGCTGAATTTAT 57.171 32.000 0.00 0.00 40.43 1.40
2440 2897 7.643569 TTTCTGCTAATCCATGCTGAATTTA 57.356 32.000 7.79 0.00 43.14 1.40
2441 2898 6.534475 TTTCTGCTAATCCATGCTGAATTT 57.466 33.333 7.79 0.00 43.14 1.82
2442 2899 6.534475 TTTTCTGCTAATCCATGCTGAATT 57.466 33.333 7.79 0.00 43.14 2.17
2443 2900 6.726490 ATTTTCTGCTAATCCATGCTGAAT 57.274 33.333 7.79 0.00 43.14 2.57
2444 2901 6.534475 AATTTTCTGCTAATCCATGCTGAA 57.466 33.333 0.00 0.00 42.41 3.02
2445 2902 6.534475 AAATTTTCTGCTAATCCATGCTGA 57.466 33.333 0.00 0.00 35.83 4.26
2446 2903 7.977853 ACTAAAATTTTCTGCTAATCCATGCTG 59.022 33.333 6.72 0.00 0.00 4.41
2447 2904 8.071177 ACTAAAATTTTCTGCTAATCCATGCT 57.929 30.769 6.72 0.00 0.00 3.79
2448 2905 8.707938 AACTAAAATTTTCTGCTAATCCATGC 57.292 30.769 6.72 0.00 0.00 4.06
2455 2912 9.528018 CACCAAAGAACTAAAATTTTCTGCTAA 57.472 29.630 6.72 0.00 32.26 3.09
2456 2913 8.908903 TCACCAAAGAACTAAAATTTTCTGCTA 58.091 29.630 6.72 0.00 32.26 3.49
2457 2914 7.706607 GTCACCAAAGAACTAAAATTTTCTGCT 59.293 33.333 6.72 0.00 32.26 4.24
2458 2915 7.706607 AGTCACCAAAGAACTAAAATTTTCTGC 59.293 33.333 6.72 0.00 32.26 4.26
2459 2916 9.586435 AAGTCACCAAAGAACTAAAATTTTCTG 57.414 29.630 6.72 4.62 32.26 3.02
2497 2954 8.926710 CGCTAGTTATTTAAGCTTGCTACATAT 58.073 33.333 9.86 0.00 34.03 1.78
2498 2955 7.095774 GCGCTAGTTATTTAAGCTTGCTACATA 60.096 37.037 9.86 0.00 34.03 2.29
2499 2956 6.292919 GCGCTAGTTATTTAAGCTTGCTACAT 60.293 38.462 9.86 0.00 34.03 2.29
2500 2957 5.006358 GCGCTAGTTATTTAAGCTTGCTACA 59.994 40.000 9.86 0.00 34.03 2.74
2501 2958 5.006358 TGCGCTAGTTATTTAAGCTTGCTAC 59.994 40.000 9.86 0.26 34.03 3.58
2502 2959 5.113383 TGCGCTAGTTATTTAAGCTTGCTA 58.887 37.500 9.86 1.58 34.03 3.49
2503 2960 3.938963 TGCGCTAGTTATTTAAGCTTGCT 59.061 39.130 9.86 0.45 34.03 3.91
2504 2961 4.273005 TGCGCTAGTTATTTAAGCTTGC 57.727 40.909 9.86 0.00 34.03 4.01
2505 2962 6.106877 TCTTGCGCTAGTTATTTAAGCTTG 57.893 37.500 18.20 0.00 34.03 4.01
2506 2963 6.737254 TTCTTGCGCTAGTTATTTAAGCTT 57.263 33.333 18.20 3.48 34.03 3.74
2507 2964 6.927294 ATTCTTGCGCTAGTTATTTAAGCT 57.073 33.333 18.20 0.00 34.03 3.74
2511 2968 9.767228 TGGTATAATTCTTGCGCTAGTTATTTA 57.233 29.630 18.20 11.71 0.00 1.40
2512 2969 8.671384 TGGTATAATTCTTGCGCTAGTTATTT 57.329 30.769 18.20 10.15 0.00 1.40
2513 2970 8.557029 GTTGGTATAATTCTTGCGCTAGTTATT 58.443 33.333 18.20 18.60 0.00 1.40
2514 2971 7.931948 AGTTGGTATAATTCTTGCGCTAGTTAT 59.068 33.333 18.20 16.46 0.00 1.89
2515 2972 7.270047 AGTTGGTATAATTCTTGCGCTAGTTA 58.730 34.615 18.20 10.92 0.00 2.24
2516 2973 6.113411 AGTTGGTATAATTCTTGCGCTAGTT 58.887 36.000 18.20 9.07 0.00 2.24
2517 2974 5.671493 AGTTGGTATAATTCTTGCGCTAGT 58.329 37.500 18.20 2.29 0.00 2.57
2518 2975 6.292919 GGAAGTTGGTATAATTCTTGCGCTAG 60.293 42.308 12.92 12.92 0.00 3.42
2519 2976 5.526111 GGAAGTTGGTATAATTCTTGCGCTA 59.474 40.000 9.73 0.00 0.00 4.26
2520 2977 4.335594 GGAAGTTGGTATAATTCTTGCGCT 59.664 41.667 9.73 0.00 0.00 5.92
2521 2978 4.335594 AGGAAGTTGGTATAATTCTTGCGC 59.664 41.667 0.00 0.00 33.10 6.09
2522 2979 6.436843 AAGGAAGTTGGTATAATTCTTGCG 57.563 37.500 0.00 0.00 33.10 4.85
2523 2980 7.035612 CCAAAGGAAGTTGGTATAATTCTTGC 58.964 38.462 0.00 0.00 42.74 4.01
2536 2993 2.031120 TGAAGCCACCAAAGGAAGTTG 58.969 47.619 0.00 0.00 0.00 3.16
2537 2994 2.310538 CTGAAGCCACCAAAGGAAGTT 58.689 47.619 0.00 0.00 0.00 2.66
2538 2995 1.986882 CTGAAGCCACCAAAGGAAGT 58.013 50.000 0.00 0.00 0.00 3.01
2539 2996 0.600057 GCTGAAGCCACCAAAGGAAG 59.400 55.000 0.00 0.00 34.31 3.46
2540 2997 0.106268 TGCTGAAGCCACCAAAGGAA 60.106 50.000 0.00 0.00 41.18 3.36
2541 2998 0.112995 ATGCTGAAGCCACCAAAGGA 59.887 50.000 0.00 0.00 41.18 3.36
2542 2999 1.838112 TATGCTGAAGCCACCAAAGG 58.162 50.000 0.00 0.00 41.18 3.11
2543 3000 3.507233 TCTTTATGCTGAAGCCACCAAAG 59.493 43.478 0.00 4.70 41.18 2.77
2544 3001 3.255642 GTCTTTATGCTGAAGCCACCAAA 59.744 43.478 0.00 0.00 41.18 3.28
2545 3002 2.819608 GTCTTTATGCTGAAGCCACCAA 59.180 45.455 0.00 0.00 41.18 3.67
2546 3003 2.224744 TGTCTTTATGCTGAAGCCACCA 60.225 45.455 0.00 0.00 41.18 4.17
2547 3004 2.436417 TGTCTTTATGCTGAAGCCACC 58.564 47.619 0.00 0.00 41.18 4.61
2548 3005 3.065925 GGATGTCTTTATGCTGAAGCCAC 59.934 47.826 0.00 0.00 41.18 5.01
2549 3006 3.282021 GGATGTCTTTATGCTGAAGCCA 58.718 45.455 0.00 0.00 41.18 4.75
2550 3007 2.289002 CGGATGTCTTTATGCTGAAGCC 59.711 50.000 0.00 0.00 41.18 4.35
2551 3008 3.198068 TCGGATGTCTTTATGCTGAAGC 58.802 45.455 0.00 0.00 42.50 3.86
2552 3009 5.998454 ATTCGGATGTCTTTATGCTGAAG 57.002 39.130 0.00 0.00 0.00 3.02
2553 3010 7.011389 CAGTAATTCGGATGTCTTTATGCTGAA 59.989 37.037 0.00 0.00 0.00 3.02
2554 3011 6.479990 CAGTAATTCGGATGTCTTTATGCTGA 59.520 38.462 0.00 0.00 0.00 4.26
2555 3012 6.293081 CCAGTAATTCGGATGTCTTTATGCTG 60.293 42.308 0.00 0.00 0.00 4.41
2556 3013 5.760253 CCAGTAATTCGGATGTCTTTATGCT 59.240 40.000 0.00 0.00 0.00 3.79
2557 3014 5.560953 GCCAGTAATTCGGATGTCTTTATGC 60.561 44.000 0.00 0.00 0.00 3.14
2558 3015 5.760253 AGCCAGTAATTCGGATGTCTTTATG 59.240 40.000 0.00 0.00 0.00 1.90
2559 3016 5.930135 AGCCAGTAATTCGGATGTCTTTAT 58.070 37.500 0.00 0.00 0.00 1.40
2560 3017 5.353394 AGCCAGTAATTCGGATGTCTTTA 57.647 39.130 0.00 0.00 0.00 1.85
2561 3018 4.222124 AGCCAGTAATTCGGATGTCTTT 57.778 40.909 0.00 0.00 0.00 2.52
2562 3019 3.914426 AGCCAGTAATTCGGATGTCTT 57.086 42.857 0.00 0.00 0.00 3.01
2563 3020 4.215908 TCTAGCCAGTAATTCGGATGTCT 58.784 43.478 0.00 0.00 0.00 3.41
2564 3021 4.585955 TCTAGCCAGTAATTCGGATGTC 57.414 45.455 0.00 0.00 0.00 3.06
2565 3022 4.835615 AGATCTAGCCAGTAATTCGGATGT 59.164 41.667 0.00 0.00 0.00 3.06
2566 3023 5.398603 AGATCTAGCCAGTAATTCGGATG 57.601 43.478 0.00 0.00 0.00 3.51
2567 3024 7.726033 ATTAGATCTAGCCAGTAATTCGGAT 57.274 36.000 2.02 0.00 0.00 4.18
2568 3025 8.645814 TTATTAGATCTAGCCAGTAATTCGGA 57.354 34.615 2.02 0.00 0.00 4.55
2569 3026 9.141400 GTTTATTAGATCTAGCCAGTAATTCGG 57.859 37.037 2.02 0.00 0.00 4.30
2570 3027 9.692749 TGTTTATTAGATCTAGCCAGTAATTCG 57.307 33.333 2.02 0.00 0.00 3.34
2573 3030 9.988815 CTGTGTTTATTAGATCTAGCCAGTAAT 57.011 33.333 2.02 0.00 0.00 1.89
2574 3031 9.197306 TCTGTGTTTATTAGATCTAGCCAGTAA 57.803 33.333 2.02 0.00 0.00 2.24
2575 3032 8.762481 TCTGTGTTTATTAGATCTAGCCAGTA 57.238 34.615 2.02 0.00 0.00 2.74
2576 3033 7.661536 TCTGTGTTTATTAGATCTAGCCAGT 57.338 36.000 2.02 0.00 0.00 4.00
2577 3034 8.200792 ACTTCTGTGTTTATTAGATCTAGCCAG 58.799 37.037 2.02 3.55 0.00 4.85
2578 3035 8.079211 ACTTCTGTGTTTATTAGATCTAGCCA 57.921 34.615 2.02 0.00 0.00 4.75
2579 3036 8.950208 AACTTCTGTGTTTATTAGATCTAGCC 57.050 34.615 2.02 0.00 0.00 3.93
2657 3114 9.696917 CTTTTGAGCTTGAAGGTATATTGTTTT 57.303 29.630 0.00 0.00 0.00 2.43
2658 3115 9.077885 TCTTTTGAGCTTGAAGGTATATTGTTT 57.922 29.630 0.00 0.00 0.00 2.83
2659 3116 8.635765 TCTTTTGAGCTTGAAGGTATATTGTT 57.364 30.769 0.00 0.00 0.00 2.83
2660 3117 8.680903 CATCTTTTGAGCTTGAAGGTATATTGT 58.319 33.333 0.00 0.00 0.00 2.71
2661 3118 8.680903 ACATCTTTTGAGCTTGAAGGTATATTG 58.319 33.333 0.00 0.00 0.00 1.90
2662 3119 8.814038 ACATCTTTTGAGCTTGAAGGTATATT 57.186 30.769 0.00 0.00 0.00 1.28
2663 3120 9.905713 TTACATCTTTTGAGCTTGAAGGTATAT 57.094 29.630 0.00 0.00 0.00 0.86
2664 3121 9.733556 TTTACATCTTTTGAGCTTGAAGGTATA 57.266 29.630 0.00 0.00 0.00 1.47
2665 3122 8.515414 GTTTACATCTTTTGAGCTTGAAGGTAT 58.485 33.333 0.00 0.00 0.00 2.73
2666 3123 7.500892 TGTTTACATCTTTTGAGCTTGAAGGTA 59.499 33.333 0.00 0.00 0.00 3.08
2667 3124 6.321181 TGTTTACATCTTTTGAGCTTGAAGGT 59.679 34.615 0.00 0.00 0.00 3.50
2668 3125 6.738114 TGTTTACATCTTTTGAGCTTGAAGG 58.262 36.000 0.00 0.00 0.00 3.46
2669 3126 8.534778 GTTTGTTTACATCTTTTGAGCTTGAAG 58.465 33.333 0.00 0.00 0.00 3.02
2670 3127 8.250332 AGTTTGTTTACATCTTTTGAGCTTGAA 58.750 29.630 0.00 0.00 0.00 2.69
2671 3128 7.701924 CAGTTTGTTTACATCTTTTGAGCTTGA 59.298 33.333 0.00 0.00 0.00 3.02
2672 3129 7.489113 ACAGTTTGTTTACATCTTTTGAGCTTG 59.511 33.333 0.00 0.00 0.00 4.01
2673 3130 7.547227 ACAGTTTGTTTACATCTTTTGAGCTT 58.453 30.769 0.00 0.00 0.00 3.74
2674 3131 7.100458 ACAGTTTGTTTACATCTTTTGAGCT 57.900 32.000 0.00 0.00 0.00 4.09
2675 3132 8.850454 TTACAGTTTGTTTACATCTTTTGAGC 57.150 30.769 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.