Multiple sequence alignment - TraesCS6B01G240800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G240800 chr6B 100.000 2370 0 0 1 2370 422564808 422567177 0.000000e+00 4377
1 TraesCS6B01G240800 chr6B 100.000 1308 0 0 2532 3839 422567339 422568646 0.000000e+00 2416
2 TraesCS6B01G240800 chr6B 93.085 188 8 4 1879 2064 87632146 87631962 1.760000e-68 270
3 TraesCS6B01G240800 chr6D 93.050 1669 85 14 228 1877 269804519 269806175 0.000000e+00 2410
4 TraesCS6B01G240800 chr6D 95.582 747 23 2 2532 3277 269806473 269807210 0.000000e+00 1188
5 TraesCS6B01G240800 chr6D 88.746 311 7 10 2060 2370 269806168 269806450 4.720000e-94 355
6 TraesCS6B01G240800 chr6D 94.631 149 7 1 3691 3839 460273562 460273415 2.980000e-56 230
7 TraesCS6B01G240800 chr6D 86.603 209 24 4 13 218 269804050 269804257 1.070000e-55 228
8 TraesCS6B01G240800 chr6D 82.692 260 40 5 3437 3692 389599719 389599977 3.860000e-55 226
9 TraesCS6B01G240800 chr6A 92.142 1349 62 17 568 1878 384314282 384315624 0.000000e+00 1864
10 TraesCS6B01G240800 chr6A 91.338 1166 86 8 2532 3692 384315907 384317062 0.000000e+00 1580
11 TraesCS6B01G240800 chr6A 92.775 346 23 2 228 572 384305119 384305463 2.060000e-137 499
12 TraesCS6B01G240800 chr6A 96.330 109 4 0 2262 2370 384315769 384315877 3.050000e-41 180
13 TraesCS6B01G240800 chr2B 94.118 187 6 3 1876 2060 78831658 78831841 2.920000e-71 279
14 TraesCS6B01G240800 chr2B 94.086 186 6 3 1876 2059 64891592 64891774 1.050000e-70 278
15 TraesCS6B01G240800 chr2B 94.054 185 7 2 1879 2062 405271873 405271692 1.050000e-70 278
16 TraesCS6B01G240800 chr2B 83.271 269 41 4 3427 3692 431775446 431775713 1.070000e-60 244
17 TraesCS6B01G240800 chr2B 90.000 180 18 0 2599 2778 513696572 513696751 2.310000e-57 233
18 TraesCS6B01G240800 chr2B 83.012 259 41 3 3437 3692 166661477 166661735 8.290000e-57 231
19 TraesCS6B01G240800 chr5B 95.000 180 4 3 1881 2059 532890468 532890293 1.050000e-70 278
20 TraesCS6B01G240800 chr5B 94.156 154 7 2 3688 3839 34043203 34043356 2.310000e-57 233
21 TraesCS6B01G240800 chr5B 86.765 204 25 2 17 218 699405649 699405446 3.860000e-55 226
22 TraesCS6B01G240800 chr7B 93.956 182 10 1 1879 2059 48250535 48250354 1.360000e-69 274
23 TraesCS6B01G240800 chr4B 93.548 186 6 4 1879 2063 666696785 666696965 4.890000e-69 272
24 TraesCS6B01G240800 chr4B 87.255 204 23 3 17 218 631589764 631589966 2.980000e-56 230
25 TraesCS6B01G240800 chr3B 93.514 185 9 3 1877 2059 740514002 740514185 4.890000e-69 272
26 TraesCS6B01G240800 chr4A 91.500 200 9 5 1867 2062 669399058 669399253 6.320000e-68 268
27 TraesCS6B01G240800 chr2A 97.333 150 3 1 3690 3838 4831037 4831186 1.770000e-63 254
28 TraesCS6B01G240800 chr2A 90.217 184 18 0 2599 2782 551481415 551481232 1.380000e-59 241
29 TraesCS6B01G240800 chr2A 84.362 243 32 3 2601 2843 551372303 551372067 2.310000e-57 233
30 TraesCS6B01G240800 chr2A 83.529 255 32 8 2599 2852 551462059 551461814 2.980000e-56 230
31 TraesCS6B01G240800 chr2A 88.587 184 21 0 2599 2782 551446875 551446692 1.390000e-54 224
32 TraesCS6B01G240800 chr2A 83.071 254 35 5 2599 2852 551467947 551467702 1.390000e-54 224
33 TraesCS6B01G240800 chr3D 96.689 151 3 1 3691 3839 402685990 402685840 2.290000e-62 250
34 TraesCS6B01G240800 chr3D 83.203 256 39 4 3439 3692 12219223 12219476 8.290000e-57 231
35 TraesCS6B01G240800 chr3D 90.110 182 10 6 3664 3839 39170281 39170102 2.980000e-56 230
36 TraesCS6B01G240800 chr3D 86.765 204 25 2 17 218 568373247 568373044 3.860000e-55 226
37 TraesCS6B01G240800 chr1D 85.714 238 29 4 3459 3692 305220181 305219945 2.960000e-61 246
38 TraesCS6B01G240800 chr2D 96.000 150 5 1 3691 3839 314367408 314367259 3.830000e-60 243
39 TraesCS6B01G240800 chr2D 83.594 256 37 3 3437 3688 116552603 116552857 6.410000e-58 235
40 TraesCS6B01G240800 chr2D 90.341 176 17 0 2599 2774 435197482 435197657 8.290000e-57 231
41 TraesCS6B01G240800 chr2D 86.765 204 25 2 17 218 330209634 330209431 3.860000e-55 226
42 TraesCS6B01G240800 chr7D 84.585 253 28 7 3442 3692 269695059 269695302 1.380000e-59 241
43 TraesCS6B01G240800 chr5A 87.745 204 23 2 17 218 547113953 547113750 1.780000e-58 237
44 TraesCS6B01G240800 chr3A 94.771 153 6 2 3689 3839 312002174 312002326 1.780000e-58 237
45 TraesCS6B01G240800 chr3A 86.829 205 23 4 17 218 684765973 684765770 3.860000e-55 226
46 TraesCS6B01G240800 chrUn 89.305 187 18 2 17 201 2004460 2004646 2.310000e-57 233
47 TraesCS6B01G240800 chr4D 89.305 187 18 2 17 201 419309700 419309886 2.310000e-57 233
48 TraesCS6B01G240800 chr1B 94.702 151 6 1 3691 3839 305181025 305181175 2.310000e-57 233
49 TraesCS6B01G240800 chr7A 95.205 146 7 0 3694 3839 450622069 450622214 8.290000e-57 231
50 TraesCS6B01G240800 chr7A 83.012 259 41 3 3436 3692 485494050 485493793 8.290000e-57 231


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G240800 chr6B 422564808 422568646 3838 False 3396.50 4377 100.00000 1 3839 2 chr6B.!!$F1 3838
1 TraesCS6B01G240800 chr6D 269804050 269807210 3160 False 1045.25 2410 90.99525 13 3277 4 chr6D.!!$F2 3264
2 TraesCS6B01G240800 chr6A 384314282 384317062 2780 False 1208.00 1864 93.27000 568 3692 3 chr6A.!!$F2 3124

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
982 1244 0.249953 ACCATTACGACCACACGCAA 60.250 50.0 0.00 0.00 36.70 4.85 F
1984 2295 0.326927 TTTTCAGGGGATGGACCGTC 59.673 55.0 4.99 4.99 40.11 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2040 2351 0.038067 ACGGCAATGCTACACGTACA 60.038 50.0 4.82 0.0 35.85 2.90 R
3806 4147 0.175760 CGAGCTTGCTAGGTTGGCTA 59.824 55.0 6.70 0.0 33.13 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 32 2.029470 TGCGCAACCTCCTTAATTTTGG 60.029 45.455 8.16 0.00 0.00 3.28
77 79 5.568620 AAGTCTGAATAGGTCAAGTTGGT 57.431 39.130 2.34 0.00 35.22 3.67
78 80 5.153950 AGTCTGAATAGGTCAAGTTGGTC 57.846 43.478 2.34 0.00 35.22 4.02
89 91 1.466167 CAAGTTGGTCGGCATGAAGAG 59.534 52.381 0.00 0.00 0.00 2.85
92 94 1.464997 GTTGGTCGGCATGAAGAGAAC 59.535 52.381 0.00 0.00 0.00 3.01
101 103 4.083110 CGGCATGAAGAGAACTGAACAATT 60.083 41.667 0.00 0.00 0.00 2.32
111 113 8.242729 AGAGAACTGAACAATTCCAAAAGATT 57.757 30.769 0.00 0.00 0.00 2.40
122 124 8.031277 ACAATTCCAAAAGATTAGTCTTGATGC 58.969 33.333 0.66 0.00 43.80 3.91
123 125 7.707624 ATTCCAAAAGATTAGTCTTGATGCA 57.292 32.000 0.66 0.00 43.80 3.96
124 126 7.707624 TTCCAAAAGATTAGTCTTGATGCAT 57.292 32.000 0.00 0.00 43.80 3.96
125 127 7.325660 TCCAAAAGATTAGTCTTGATGCATC 57.674 36.000 20.14 20.14 43.80 3.91
126 128 6.037500 TCCAAAAGATTAGTCTTGATGCATCG 59.962 38.462 21.34 8.64 43.80 3.84
128 130 4.063998 AGATTAGTCTTGATGCATCGCA 57.936 40.909 21.34 9.96 44.86 5.10
129 131 4.056740 AGATTAGTCTTGATGCATCGCAG 58.943 43.478 21.34 18.54 43.65 5.18
130 132 3.525268 TTAGTCTTGATGCATCGCAGA 57.475 42.857 21.34 20.37 43.65 4.26
192 195 5.170748 GGAGCTTTGTTATGTTCCATTTGG 58.829 41.667 0.00 0.00 34.37 3.28
202 205 1.071642 TCCATTTGGAACACCGCGA 59.928 52.632 8.23 0.00 42.18 5.87
204 207 1.209127 CATTTGGAACACCGCGACC 59.791 57.895 8.23 3.39 39.29 4.79
213 216 4.988716 ACCGCGACCCTCACCTCA 62.989 66.667 8.23 0.00 0.00 3.86
218 221 0.460987 GCGACCCTCACCTCATCTTG 60.461 60.000 0.00 0.00 0.00 3.02
219 222 1.186200 CGACCCTCACCTCATCTTGA 58.814 55.000 0.00 0.00 0.00 3.02
220 223 1.550524 CGACCCTCACCTCATCTTGAA 59.449 52.381 0.00 0.00 0.00 2.69
221 224 2.417924 CGACCCTCACCTCATCTTGAAG 60.418 54.545 0.00 0.00 0.00 3.02
223 226 1.211457 CCCTCACCTCATCTTGAAGGG 59.789 57.143 0.00 0.00 0.00 3.95
225 228 2.170187 CCTCACCTCATCTTGAAGGGAG 59.830 54.545 7.52 7.52 0.00 4.30
226 229 3.102972 CTCACCTCATCTTGAAGGGAGA 58.897 50.000 13.77 1.98 0.00 3.71
232 487 4.180057 CTCATCTTGAAGGGAGAAAGTCG 58.820 47.826 8.47 0.00 0.00 4.18
292 547 4.309933 GCAAGGGTTTCATCCTTCTTTTG 58.690 43.478 0.00 0.00 42.25 2.44
325 580 5.173774 TGTGCTGTGAAATCTTTGACTTC 57.826 39.130 0.00 0.00 0.00 3.01
329 584 4.516698 GCTGTGAAATCTTTGACTTCCTCA 59.483 41.667 0.00 0.00 0.00 3.86
341 596 9.868160 TCTTTGACTTCCTCATCTAGATACATA 57.132 33.333 4.54 0.00 0.00 2.29
349 604 8.100508 TCCTCATCTAGATACATACGTTTGAG 57.899 38.462 13.16 5.39 0.00 3.02
351 606 6.371389 TCATCTAGATACATACGTTTGAGCG 58.629 40.000 13.16 0.00 37.94 5.03
366 621 2.896168 TGAGCGTTAACTAATTCCCGG 58.104 47.619 3.71 0.00 0.00 5.73
367 622 1.596260 GAGCGTTAACTAATTCCCGGC 59.404 52.381 3.71 0.00 0.00 6.13
387 643 4.755123 CGGCGAGAAAGTATATCCCAAAAT 59.245 41.667 0.00 0.00 0.00 1.82
395 651 9.320295 AGAAAGTATATCCCAAAATGGTTCAAA 57.680 29.630 0.00 0.00 35.17 2.69
412 668 1.818674 CAAAGGCCTCGCTAAAACCAT 59.181 47.619 5.23 0.00 0.00 3.55
418 674 3.883489 GGCCTCGCTAAAACCATCTTAAT 59.117 43.478 0.00 0.00 0.00 1.40
436 692 2.704464 ATAACCCCTAAAGCGTCACC 57.296 50.000 0.00 0.00 0.00 4.02
441 697 1.271163 CCCCTAAAGCGTCACCAGAAA 60.271 52.381 0.00 0.00 0.00 2.52
476 732 3.542969 ACCTTTGGGGCTACTCAAAAT 57.457 42.857 0.00 0.00 39.10 1.82
499 755 0.808060 CACACTGTGCACGTACACCA 60.808 55.000 16.13 3.99 39.93 4.17
530 786 3.726557 TCATCACCATCTTTCCTTGCT 57.273 42.857 0.00 0.00 0.00 3.91
542 798 3.535280 TTCCTTGCTTTCCAAACAACC 57.465 42.857 0.00 0.00 31.94 3.77
844 1100 1.599047 CTGCATCCTCCTCGTTGGT 59.401 57.895 0.00 0.00 37.07 3.67
885 1147 3.513027 CTTCCAAAGCCTCCCCCT 58.487 61.111 0.00 0.00 0.00 4.79
886 1148 1.304617 CTTCCAAAGCCTCCCCCTC 59.695 63.158 0.00 0.00 0.00 4.30
927 1189 2.438795 GCTCCTCGTCCTCGTCCT 60.439 66.667 0.00 0.00 38.33 3.85
928 1190 1.153208 GCTCCTCGTCCTCGTCCTA 60.153 63.158 0.00 0.00 38.33 2.94
935 1197 5.911752 TCCTCGTCCTCGTCCTATATATAC 58.088 45.833 0.00 0.00 38.33 1.47
950 1212 6.591448 CCTATATATACACACACACATGCCTG 59.409 42.308 0.00 0.00 0.00 4.85
982 1244 0.249953 ACCATTACGACCACACGCAA 60.250 50.000 0.00 0.00 36.70 4.85
992 1254 1.533731 ACCACACGCAACTTTAATCGG 59.466 47.619 0.00 0.00 0.00 4.18
1305 1582 8.383318 TCTTGAGACAACTCTTTTCTATTTGG 57.617 34.615 0.00 0.00 42.99 3.28
1365 1652 6.073327 TGCGAGTAGTTCCTATAACTGATG 57.927 41.667 0.74 0.00 0.00 3.07
1466 1755 7.015292 TCCGTATTTTGGAGAGTATGAGCTTAT 59.985 37.037 0.00 0.00 0.00 1.73
1492 1781 5.968848 TGTAAGAGAACAAATCAAACAACGC 59.031 36.000 0.00 0.00 0.00 4.84
1512 1817 1.303799 CGCAGCCTCTTGCATCAGTT 61.304 55.000 0.00 0.00 44.28 3.16
1543 1848 4.647611 TGTTTGGTAGATGTTGGACGATT 58.352 39.130 0.00 0.00 0.00 3.34
1592 1901 3.735746 GCAGTTTGGTGTGAAGTAAATGC 59.264 43.478 0.00 0.00 0.00 3.56
1596 1905 4.314740 TTGGTGTGAAGTAAATGCCAAC 57.685 40.909 0.00 0.00 30.64 3.77
1597 1906 2.292016 TGGTGTGAAGTAAATGCCAACG 59.708 45.455 0.00 0.00 0.00 4.10
1670 1981 5.163693 TGCTTCTGTAGATCGACGTAATTCA 60.164 40.000 1.33 0.00 0.00 2.57
1676 1987 7.041187 TGTAGATCGACGTAATTCAACAAAC 57.959 36.000 1.33 0.00 0.00 2.93
1717 2028 4.036027 CCAGATGTGTTGCTCATGAATACC 59.964 45.833 0.00 0.00 0.00 2.73
1728 2039 3.378512 TCATGAATACCCTGCAGAGTCT 58.621 45.455 17.39 0.00 0.00 3.24
1741 2052 2.952310 GCAGAGTCTTGTTGTTTCCCTT 59.048 45.455 0.00 0.00 0.00 3.95
1744 2055 5.278022 GCAGAGTCTTGTTGTTTCCCTTTAG 60.278 44.000 0.00 0.00 0.00 1.85
1802 2113 4.081254 ACTCATAACGTTACCTTTCCCTCC 60.081 45.833 10.81 0.00 0.00 4.30
1878 2189 8.613482 GGTTGTCCTGCTCTAGATAATAAAAAC 58.387 37.037 0.00 0.00 0.00 2.43
1879 2190 9.162764 GTTGTCCTGCTCTAGATAATAAAAACA 57.837 33.333 0.00 0.00 0.00 2.83
1880 2191 9.733556 TTGTCCTGCTCTAGATAATAAAAACAA 57.266 29.630 0.00 0.00 0.00 2.83
1881 2192 9.733556 TGTCCTGCTCTAGATAATAAAAACAAA 57.266 29.630 0.00 0.00 0.00 2.83
1901 2212 9.463443 AAACAAAAATGCTAGACATACAAAGAC 57.537 29.630 0.00 0.00 38.34 3.01
1902 2213 8.396272 ACAAAAATGCTAGACATACAAAGACT 57.604 30.769 0.00 0.00 38.34 3.24
1903 2214 8.850156 ACAAAAATGCTAGACATACAAAGACTT 58.150 29.630 0.00 0.00 38.34 3.01
1906 2217 9.502091 AAAATGCTAGACATACAAAGACTTACA 57.498 29.630 0.00 0.00 38.34 2.41
1907 2218 8.480643 AATGCTAGACATACAAAGACTTACAC 57.519 34.615 0.00 0.00 38.34 2.90
1908 2219 6.090783 TGCTAGACATACAAAGACTTACACG 58.909 40.000 0.00 0.00 0.00 4.49
1909 2220 6.091437 GCTAGACATACAAAGACTTACACGT 58.909 40.000 0.00 0.00 0.00 4.49
1910 2221 6.585322 GCTAGACATACAAAGACTTACACGTT 59.415 38.462 0.00 0.00 0.00 3.99
1911 2222 7.115947 GCTAGACATACAAAGACTTACACGTTT 59.884 37.037 0.00 0.00 0.00 3.60
1912 2223 7.781548 AGACATACAAAGACTTACACGTTTT 57.218 32.000 0.00 0.00 0.00 2.43
1913 2224 8.205131 AGACATACAAAGACTTACACGTTTTT 57.795 30.769 0.00 0.00 0.00 1.94
1914 2225 9.316730 AGACATACAAAGACTTACACGTTTTTA 57.683 29.630 0.00 0.00 0.00 1.52
1915 2226 9.361712 GACATACAAAGACTTACACGTTTTTAC 57.638 33.333 0.00 0.00 0.00 2.01
1916 2227 8.881743 ACATACAAAGACTTACACGTTTTTACA 58.118 29.630 0.00 0.00 0.00 2.41
1917 2228 9.150653 CATACAAAGACTTACACGTTTTTACAC 57.849 33.333 0.00 0.00 0.00 2.90
1918 2229 6.242829 ACAAAGACTTACACGTTTTTACACG 58.757 36.000 0.00 0.00 46.04 4.49
1919 2230 4.442350 AGACTTACACGTTTTTACACGC 57.558 40.909 0.00 0.00 44.37 5.34
1920 2231 4.114794 AGACTTACACGTTTTTACACGCT 58.885 39.130 0.00 0.00 44.37 5.07
1921 2232 4.207841 AGACTTACACGTTTTTACACGCTC 59.792 41.667 0.00 0.00 44.37 5.03
1922 2233 3.245990 ACTTACACGTTTTTACACGCTCC 59.754 43.478 0.00 0.00 44.37 4.70
1923 2234 1.944032 ACACGTTTTTACACGCTCCT 58.056 45.000 0.00 0.00 44.37 3.69
1924 2235 2.282407 ACACGTTTTTACACGCTCCTT 58.718 42.857 0.00 0.00 44.37 3.36
1925 2236 2.286025 ACACGTTTTTACACGCTCCTTC 59.714 45.455 0.00 0.00 44.37 3.46
1926 2237 1.869132 ACGTTTTTACACGCTCCTTCC 59.131 47.619 0.00 0.00 44.37 3.46
1927 2238 1.868498 CGTTTTTACACGCTCCTTCCA 59.132 47.619 0.00 0.00 32.43 3.53
1928 2239 2.482721 CGTTTTTACACGCTCCTTCCAT 59.517 45.455 0.00 0.00 32.43 3.41
1929 2240 3.424433 CGTTTTTACACGCTCCTTCCATC 60.424 47.826 0.00 0.00 32.43 3.51
1930 2241 3.695830 TTTTACACGCTCCTTCCATCT 57.304 42.857 0.00 0.00 0.00 2.90
1931 2242 4.811969 TTTTACACGCTCCTTCCATCTA 57.188 40.909 0.00 0.00 0.00 1.98
1932 2243 4.811969 TTTACACGCTCCTTCCATCTAA 57.188 40.909 0.00 0.00 0.00 2.10
1933 2244 2.674796 ACACGCTCCTTCCATCTAAC 57.325 50.000 0.00 0.00 0.00 2.34
1934 2245 1.899814 ACACGCTCCTTCCATCTAACA 59.100 47.619 0.00 0.00 0.00 2.41
1935 2246 2.301870 ACACGCTCCTTCCATCTAACAA 59.698 45.455 0.00 0.00 0.00 2.83
1936 2247 2.673368 CACGCTCCTTCCATCTAACAAC 59.327 50.000 0.00 0.00 0.00 3.32
1937 2248 2.280628 CGCTCCTTCCATCTAACAACC 58.719 52.381 0.00 0.00 0.00 3.77
1938 2249 2.354704 CGCTCCTTCCATCTAACAACCA 60.355 50.000 0.00 0.00 0.00 3.67
1939 2250 3.686016 GCTCCTTCCATCTAACAACCAA 58.314 45.455 0.00 0.00 0.00 3.67
1940 2251 4.273318 GCTCCTTCCATCTAACAACCAAT 58.727 43.478 0.00 0.00 0.00 3.16
1941 2252 4.336713 GCTCCTTCCATCTAACAACCAATC 59.663 45.833 0.00 0.00 0.00 2.67
1942 2253 5.500234 CTCCTTCCATCTAACAACCAATCA 58.500 41.667 0.00 0.00 0.00 2.57
1943 2254 5.253330 TCCTTCCATCTAACAACCAATCAC 58.747 41.667 0.00 0.00 0.00 3.06
1944 2255 5.009631 CCTTCCATCTAACAACCAATCACA 58.990 41.667 0.00 0.00 0.00 3.58
1945 2256 5.476599 CCTTCCATCTAACAACCAATCACAA 59.523 40.000 0.00 0.00 0.00 3.33
1946 2257 6.015519 CCTTCCATCTAACAACCAATCACAAA 60.016 38.462 0.00 0.00 0.00 2.83
1947 2258 6.325919 TCCATCTAACAACCAATCACAAAC 57.674 37.500 0.00 0.00 0.00 2.93
1948 2259 5.242838 TCCATCTAACAACCAATCACAAACC 59.757 40.000 0.00 0.00 0.00 3.27
1949 2260 5.243730 CCATCTAACAACCAATCACAAACCT 59.756 40.000 0.00 0.00 0.00 3.50
1950 2261 6.381801 CATCTAACAACCAATCACAAACCTC 58.618 40.000 0.00 0.00 0.00 3.85
1951 2262 5.690865 TCTAACAACCAATCACAAACCTCT 58.309 37.500 0.00 0.00 0.00 3.69
1952 2263 4.918810 AACAACCAATCACAAACCTCTC 57.081 40.909 0.00 0.00 0.00 3.20
1953 2264 3.222603 ACAACCAATCACAAACCTCTCC 58.777 45.455 0.00 0.00 0.00 3.71
1954 2265 2.558359 CAACCAATCACAAACCTCTCCC 59.442 50.000 0.00 0.00 0.00 4.30
1955 2266 1.075536 ACCAATCACAAACCTCTCCCC 59.924 52.381 0.00 0.00 0.00 4.81
1956 2267 1.616994 CCAATCACAAACCTCTCCCCC 60.617 57.143 0.00 0.00 0.00 5.40
1981 2292 3.566351 CCTAATTTTCAGGGGATGGACC 58.434 50.000 0.00 0.00 38.08 4.46
1982 2293 2.143876 AATTTTCAGGGGATGGACCG 57.856 50.000 0.00 0.00 40.11 4.79
1983 2294 0.999712 ATTTTCAGGGGATGGACCGT 59.000 50.000 0.00 0.00 40.11 4.83
1984 2295 0.326927 TTTTCAGGGGATGGACCGTC 59.673 55.000 4.99 4.99 40.11 4.79
1985 2296 1.559065 TTTCAGGGGATGGACCGTCC 61.559 60.000 23.00 23.00 38.72 4.79
1986 2297 3.849951 CAGGGGATGGACCGTCCG 61.850 72.222 23.87 8.92 40.24 4.79
1989 2300 4.222847 GGGATGGACCGTCCGCTC 62.223 72.222 23.87 11.44 40.24 5.03
1990 2301 3.458163 GGATGGACCGTCCGCTCA 61.458 66.667 17.19 0.00 40.17 4.26
1991 2302 2.202756 GATGGACCGTCCGCTCAC 60.203 66.667 13.02 0.00 40.17 3.51
1992 2303 3.718210 GATGGACCGTCCGCTCACC 62.718 68.421 13.02 0.00 40.17 4.02
1993 2304 4.988716 TGGACCGTCCGCTCACCT 62.989 66.667 13.02 0.00 40.17 4.00
1994 2305 2.753043 GGACCGTCCGCTCACCTA 60.753 66.667 0.65 0.00 0.00 3.08
1995 2306 2.125961 GGACCGTCCGCTCACCTAT 61.126 63.158 0.65 0.00 0.00 2.57
1996 2307 1.673808 GGACCGTCCGCTCACCTATT 61.674 60.000 0.65 0.00 0.00 1.73
1997 2308 0.527817 GACCGTCCGCTCACCTATTG 60.528 60.000 0.00 0.00 0.00 1.90
1998 2309 0.968901 ACCGTCCGCTCACCTATTGA 60.969 55.000 0.00 0.00 0.00 2.57
1999 2310 0.527817 CCGTCCGCTCACCTATTGAC 60.528 60.000 0.00 0.00 0.00 3.18
2000 2311 0.527817 CGTCCGCTCACCTATTGACC 60.528 60.000 0.00 0.00 0.00 4.02
2001 2312 0.535335 GTCCGCTCACCTATTGACCA 59.465 55.000 0.00 0.00 0.00 4.02
2002 2313 1.066430 GTCCGCTCACCTATTGACCAA 60.066 52.381 0.00 0.00 0.00 3.67
2003 2314 1.837439 TCCGCTCACCTATTGACCAAT 59.163 47.619 0.64 0.64 34.93 3.16
2004 2315 2.158957 TCCGCTCACCTATTGACCAATC 60.159 50.000 0.00 0.00 32.50 2.67
2005 2316 2.419990 CCGCTCACCTATTGACCAATCA 60.420 50.000 0.00 0.00 32.50 2.57
2018 2329 6.773976 TTGACCAATCAAGATTAACCATCC 57.226 37.500 0.00 0.00 40.01 3.51
2019 2330 6.078456 TGACCAATCAAGATTAACCATCCT 57.922 37.500 0.00 0.00 31.20 3.24
2020 2331 5.887598 TGACCAATCAAGATTAACCATCCTG 59.112 40.000 0.00 0.00 31.20 3.86
2021 2332 5.831103 ACCAATCAAGATTAACCATCCTGT 58.169 37.500 0.00 0.00 31.20 4.00
2022 2333 6.969043 ACCAATCAAGATTAACCATCCTGTA 58.031 36.000 0.00 0.00 31.20 2.74
2023 2334 7.410174 ACCAATCAAGATTAACCATCCTGTAA 58.590 34.615 0.00 0.00 31.20 2.41
2024 2335 7.893302 ACCAATCAAGATTAACCATCCTGTAAA 59.107 33.333 0.00 0.00 31.20 2.01
2025 2336 8.748412 CCAATCAAGATTAACCATCCTGTAAAA 58.252 33.333 0.00 0.00 31.20 1.52
2026 2337 9.793252 CAATCAAGATTAACCATCCTGTAAAAG 57.207 33.333 0.00 0.00 31.20 2.27
2027 2338 7.391148 TCAAGATTAACCATCCTGTAAAAGC 57.609 36.000 0.00 0.00 31.20 3.51
2028 2339 6.377146 TCAAGATTAACCATCCTGTAAAAGCC 59.623 38.462 0.00 0.00 31.20 4.35
2029 2340 6.079712 AGATTAACCATCCTGTAAAAGCCT 57.920 37.500 0.00 0.00 31.20 4.58
2030 2341 5.888161 AGATTAACCATCCTGTAAAAGCCTG 59.112 40.000 0.00 0.00 31.20 4.85
2031 2342 3.525800 AACCATCCTGTAAAAGCCTGT 57.474 42.857 0.00 0.00 0.00 4.00
2032 2343 4.650972 AACCATCCTGTAAAAGCCTGTA 57.349 40.909 0.00 0.00 0.00 2.74
2033 2344 4.650972 ACCATCCTGTAAAAGCCTGTAA 57.349 40.909 0.00 0.00 0.00 2.41
2034 2345 4.993028 ACCATCCTGTAAAAGCCTGTAAA 58.007 39.130 0.00 0.00 0.00 2.01
2035 2346 5.580022 ACCATCCTGTAAAAGCCTGTAAAT 58.420 37.500 0.00 0.00 0.00 1.40
2036 2347 5.652452 ACCATCCTGTAAAAGCCTGTAAATC 59.348 40.000 0.00 0.00 0.00 2.17
2037 2348 5.220854 CCATCCTGTAAAAGCCTGTAAATCG 60.221 44.000 0.00 0.00 0.00 3.34
2038 2349 4.901868 TCCTGTAAAAGCCTGTAAATCGT 58.098 39.130 0.00 0.00 0.00 3.73
2039 2350 5.310451 TCCTGTAAAAGCCTGTAAATCGTT 58.690 37.500 0.00 0.00 0.00 3.85
2040 2351 5.766174 TCCTGTAAAAGCCTGTAAATCGTTT 59.234 36.000 0.00 0.00 0.00 3.60
2041 2352 5.856455 CCTGTAAAAGCCTGTAAATCGTTTG 59.144 40.000 0.00 0.00 0.00 2.93
2042 2353 6.380095 TGTAAAAGCCTGTAAATCGTTTGT 57.620 33.333 0.00 0.00 0.00 2.83
2043 2354 7.308109 CCTGTAAAAGCCTGTAAATCGTTTGTA 60.308 37.037 0.00 0.00 0.00 2.41
2044 2355 7.354257 TGTAAAAGCCTGTAAATCGTTTGTAC 58.646 34.615 0.00 0.00 0.00 2.90
2056 2367 2.492001 CGTTTGTACGTGTAGCATTGC 58.508 47.619 0.00 0.00 42.72 3.56
2057 2368 2.723618 CGTTTGTACGTGTAGCATTGCC 60.724 50.000 4.70 0.00 42.72 4.52
2058 2369 1.072391 TTGTACGTGTAGCATTGCCG 58.928 50.000 4.70 4.23 0.00 5.69
2059 2370 0.038067 TGTACGTGTAGCATTGCCGT 60.038 50.000 13.66 13.66 35.68 5.68
2060 2371 1.201880 TGTACGTGTAGCATTGCCGTA 59.798 47.619 11.99 11.99 33.32 4.02
2061 2372 2.261345 GTACGTGTAGCATTGCCGTAA 58.739 47.619 15.97 2.87 35.98 3.18
2062 2373 2.018542 ACGTGTAGCATTGCCGTAAT 57.981 45.000 4.70 0.00 0.00 1.89
2063 2374 3.167921 ACGTGTAGCATTGCCGTAATA 57.832 42.857 4.70 0.00 0.00 0.98
2064 2375 3.523547 ACGTGTAGCATTGCCGTAATAA 58.476 40.909 4.70 0.00 0.00 1.40
2065 2376 3.933955 ACGTGTAGCATTGCCGTAATAAA 59.066 39.130 4.70 0.00 0.00 1.40
2066 2377 4.392445 ACGTGTAGCATTGCCGTAATAAAA 59.608 37.500 4.70 0.00 0.00 1.52
2067 2378 5.106634 ACGTGTAGCATTGCCGTAATAAAAA 60.107 36.000 4.70 0.00 0.00 1.94
2073 2384 4.798387 GCATTGCCGTAATAAAAAGGACAG 59.202 41.667 0.00 0.00 0.00 3.51
2100 2411 1.446272 GCCCAGTCCGTCTTCTTCG 60.446 63.158 0.00 0.00 0.00 3.79
2115 2426 5.379732 CTTCTTCGGAAGTCAGAACTAGT 57.620 43.478 16.78 0.00 44.56 2.57
2116 2427 6.497785 CTTCTTCGGAAGTCAGAACTAGTA 57.502 41.667 16.78 0.00 44.56 1.82
2117 2428 5.876612 TCTTCGGAAGTCAGAACTAGTAC 57.123 43.478 16.78 0.00 33.48 2.73
2118 2429 5.311265 TCTTCGGAAGTCAGAACTAGTACA 58.689 41.667 16.78 0.00 33.48 2.90
2119 2430 5.411977 TCTTCGGAAGTCAGAACTAGTACAG 59.588 44.000 16.78 0.00 33.48 2.74
2120 2431 4.649692 TCGGAAGTCAGAACTAGTACAGT 58.350 43.478 0.00 0.00 40.05 3.55
2121 2432 5.798132 TCGGAAGTCAGAACTAGTACAGTA 58.202 41.667 0.00 0.00 36.04 2.74
2122 2433 5.641209 TCGGAAGTCAGAACTAGTACAGTAC 59.359 44.000 2.05 2.05 36.04 2.73
2144 2460 3.128938 CAGTACAGTACACTACTCCTGCC 59.871 52.174 13.37 0.00 36.76 4.85
2299 2617 2.739932 GCTGATAACACGCATGAGAGGT 60.740 50.000 2.50 0.00 0.00 3.85
2310 2645 2.480416 GCATGAGAGGTAGACAGAACCG 60.480 54.545 0.00 0.00 42.15 4.44
2312 2647 3.708403 TGAGAGGTAGACAGAACCGTA 57.292 47.619 0.00 0.00 42.15 4.02
2314 2649 3.244665 TGAGAGGTAGACAGAACCGTACA 60.245 47.826 0.00 0.00 42.15 2.90
2315 2650 3.080319 AGAGGTAGACAGAACCGTACAC 58.920 50.000 0.00 0.00 42.15 2.90
2316 2651 2.816087 GAGGTAGACAGAACCGTACACA 59.184 50.000 0.00 0.00 42.15 3.72
2317 2652 3.428532 AGGTAGACAGAACCGTACACAT 58.571 45.455 0.00 0.00 42.15 3.21
2318 2653 3.192844 AGGTAGACAGAACCGTACACATG 59.807 47.826 0.00 0.00 42.15 3.21
2319 2654 2.743636 AGACAGAACCGTACACATGG 57.256 50.000 0.00 0.00 36.82 3.66
2320 2655 1.968493 AGACAGAACCGTACACATGGT 59.032 47.619 0.00 0.00 46.63 3.55
2321 2656 2.029290 AGACAGAACCGTACACATGGTC 60.029 50.000 0.00 0.00 43.69 4.02
2322 2657 1.336517 ACAGAACCGTACACATGGTCG 60.337 52.381 0.00 0.00 43.69 4.79
2323 2658 1.068125 CAGAACCGTACACATGGTCGA 60.068 52.381 0.00 0.00 43.69 4.20
2324 2659 1.614903 AGAACCGTACACATGGTCGAA 59.385 47.619 0.00 0.00 43.69 3.71
2325 2660 1.723003 GAACCGTACACATGGTCGAAC 59.277 52.381 0.00 0.00 43.69 3.95
2326 2661 0.037975 ACCGTACACATGGTCGAACC 60.038 55.000 0.00 0.00 40.20 3.62
2327 2662 0.245539 CCGTACACATGGTCGAACCT 59.754 55.000 0.00 0.00 39.58 3.50
2328 2663 1.337447 CCGTACACATGGTCGAACCTT 60.337 52.381 0.00 0.00 39.58 3.50
2329 2664 1.990563 CGTACACATGGTCGAACCTTC 59.009 52.381 0.00 0.00 39.58 3.46
2330 2665 2.608506 CGTACACATGGTCGAACCTTCA 60.609 50.000 0.00 0.00 39.58 3.02
2557 2892 4.752101 GTGTGTGCAAAGCCTAGGATATAG 59.248 45.833 14.75 0.40 0.00 1.31
2569 2904 5.998363 GCCTAGGATATAGTTTGGGTTTCAG 59.002 44.000 14.75 0.00 0.00 3.02
2579 2914 6.783708 AGTTTGGGTTTCAGAATGTAACAA 57.216 33.333 2.44 0.00 46.53 2.83
2676 3011 0.827507 GGCTGCTGTTCAAGGGGAAA 60.828 55.000 0.00 0.00 37.23 3.13
2733 3068 1.975680 GTGAGGGACAAGGACAAGGTA 59.024 52.381 0.00 0.00 0.00 3.08
2810 3145 2.829206 CGGCACAGGTCACGCAAAA 61.829 57.895 0.00 0.00 0.00 2.44
2950 3285 4.142160 GGAAGGTTTTATGTCTGGAATGGC 60.142 45.833 0.00 0.00 0.00 4.40
3164 3501 1.892209 ACGTGGTCTTGTCCCATTTC 58.108 50.000 0.00 0.00 33.76 2.17
3172 3509 2.487762 TCTTGTCCCATTTCGTTGCATC 59.512 45.455 0.00 0.00 0.00 3.91
3174 3511 0.098728 GTCCCATTTCGTTGCATCGG 59.901 55.000 16.60 1.19 0.00 4.18
3191 3528 1.128200 CGGTTATGGATGGGAGTGGA 58.872 55.000 0.00 0.00 0.00 4.02
3308 3645 9.958180 ATGGATTACAATATACATCCGATTCAA 57.042 29.630 0.00 0.00 38.49 2.69
3315 3652 7.908082 ACAATATACATCCGATTCAAACAAACG 59.092 33.333 0.00 0.00 0.00 3.60
3316 3653 5.873179 ATACATCCGATTCAAACAAACGT 57.127 34.783 0.00 0.00 0.00 3.99
3319 3656 5.685841 ACATCCGATTCAAACAAACGTTAG 58.314 37.500 0.00 0.00 0.00 2.34
3324 3661 5.966503 CCGATTCAAACAAACGTTAGAACAA 59.033 36.000 0.00 0.00 0.00 2.83
3326 3663 6.685403 CGATTCAAACAAACGTTAGAACAACT 59.315 34.615 0.00 0.00 0.00 3.16
3327 3664 7.217447 CGATTCAAACAAACGTTAGAACAACTT 59.783 33.333 0.00 0.00 0.00 2.66
3328 3665 9.493206 GATTCAAACAAACGTTAGAACAACTTA 57.507 29.630 0.00 0.00 0.00 2.24
3373 3710 6.472686 ACAGGGAGAGTAAATGTGTATCTC 57.527 41.667 0.00 0.00 36.50 2.75
3375 3712 6.670027 ACAGGGAGAGTAAATGTGTATCTCTT 59.330 38.462 0.00 0.00 37.23 2.85
3376 3713 7.181125 ACAGGGAGAGTAAATGTGTATCTCTTT 59.819 37.037 0.00 0.00 37.23 2.52
3377 3714 7.708752 CAGGGAGAGTAAATGTGTATCTCTTTC 59.291 40.741 0.00 0.00 37.23 2.62
3378 3715 7.621683 AGGGAGAGTAAATGTGTATCTCTTTCT 59.378 37.037 0.00 0.00 37.23 2.52
3379 3716 8.915036 GGGAGAGTAAATGTGTATCTCTTTCTA 58.085 37.037 0.00 0.00 37.23 2.10
3380 3717 9.959749 GGAGAGTAAATGTGTATCTCTTTCTAG 57.040 37.037 0.00 0.00 37.23 2.43
3381 3718 9.959749 GAGAGTAAATGTGTATCTCTTTCTAGG 57.040 37.037 0.00 0.00 35.93 3.02
3422 3760 1.269257 GCTGCTTGCGAAAAACCTCTT 60.269 47.619 0.00 0.00 0.00 2.85
3451 3789 5.133221 ACATGTATTAAGGGCATCTCCAAC 58.867 41.667 0.00 0.00 36.21 3.77
3452 3790 4.853468 TGTATTAAGGGCATCTCCAACA 57.147 40.909 0.00 0.00 36.21 3.33
3458 3796 1.211457 AGGGCATCTCCAACACTGATC 59.789 52.381 0.00 0.00 36.21 2.92
3461 3799 1.669779 GCATCTCCAACACTGATCTGC 59.330 52.381 0.00 0.00 0.00 4.26
3484 3822 4.812476 TGCTCCCGCATTCGTCCG 62.812 66.667 0.00 0.00 42.25 4.79
3492 3830 2.180769 CATTCGTCCGCGGACAGA 59.819 61.111 46.26 39.37 44.77 3.41
3514 3854 2.093106 GACTAGTCCACGGACACAGAT 58.907 52.381 18.21 0.00 46.76 2.90
3516 3856 1.819288 CTAGTCCACGGACACAGATGT 59.181 52.381 18.21 0.00 46.76 3.06
3525 3865 2.124983 CACAGATGTGGGAGCCGG 60.125 66.667 5.02 0.00 42.10 6.13
3552 3892 3.486209 CCAACGTTACCCGCATACATTTC 60.486 47.826 0.00 0.00 41.42 2.17
3563 3904 3.240401 CGCATACATTTCAACCGCATTTC 59.760 43.478 0.00 0.00 0.00 2.17
3566 3907 5.444481 GCATACATTTCAACCGCATTTCAAC 60.444 40.000 0.00 0.00 0.00 3.18
3570 3911 3.347958 TTCAACCGCATTTCAACAGAC 57.652 42.857 0.00 0.00 0.00 3.51
3571 3912 1.606668 TCAACCGCATTTCAACAGACC 59.393 47.619 0.00 0.00 0.00 3.85
3572 3913 0.591170 AACCGCATTTCAACAGACCG 59.409 50.000 0.00 0.00 0.00 4.79
3590 3931 2.294791 ACCGGACGAAATTCATGCAAAA 59.705 40.909 9.46 0.00 0.00 2.44
3596 3937 3.243234 ACGAAATTCATGCAAAACCGACA 60.243 39.130 0.00 0.00 0.00 4.35
3607 3948 4.037327 TGCAAAACCGACAGAATTCATCAA 59.963 37.500 8.44 0.00 0.00 2.57
3618 3959 8.236586 CGACAGAATTCATCAAAGTTTGGATAA 58.763 33.333 15.47 7.62 0.00 1.75
3692 4033 9.965824 AACAATAGTTCAAAATCAACGAGATTT 57.034 25.926 12.53 12.53 45.28 2.17
3734 4075 9.443323 TGGACTTTATTCAATCGAAATAACAGA 57.557 29.630 0.00 0.00 34.01 3.41
3742 4083 8.642908 TTCAATCGAAATAACAGATACATCGT 57.357 30.769 0.00 0.00 0.00 3.73
3743 4084 8.642908 TCAATCGAAATAACAGATACATCGTT 57.357 30.769 0.00 5.32 0.00 3.85
3744 4085 9.093970 TCAATCGAAATAACAGATACATCGTTT 57.906 29.630 0.00 0.00 0.00 3.60
3745 4086 9.147364 CAATCGAAATAACAGATACATCGTTTG 57.853 33.333 0.00 0.00 33.33 2.93
3746 4087 7.821595 TCGAAATAACAGATACATCGTTTGT 57.178 32.000 0.00 0.00 42.62 2.83
3747 4088 7.671827 TCGAAATAACAGATACATCGTTTGTG 58.328 34.615 4.39 0.00 39.48 3.33
3748 4089 7.542824 TCGAAATAACAGATACATCGTTTGTGA 59.457 33.333 4.39 0.00 39.48 3.58
3749 4090 7.841277 CGAAATAACAGATACATCGTTTGTGAG 59.159 37.037 4.39 0.00 39.48 3.51
3750 4091 7.539712 AATAACAGATACATCGTTTGTGAGG 57.460 36.000 4.39 0.00 39.48 3.86
3751 4092 4.801330 ACAGATACATCGTTTGTGAGGA 57.199 40.909 4.39 0.00 39.48 3.71
3752 4093 5.147330 ACAGATACATCGTTTGTGAGGAA 57.853 39.130 4.39 0.00 39.48 3.36
3753 4094 5.547465 ACAGATACATCGTTTGTGAGGAAA 58.453 37.500 4.39 0.00 39.48 3.13
3754 4095 5.639506 ACAGATACATCGTTTGTGAGGAAAG 59.360 40.000 4.39 0.00 39.48 2.62
3755 4096 5.063944 CAGATACATCGTTTGTGAGGAAAGG 59.936 44.000 4.39 0.00 39.48 3.11
3756 4097 3.208747 ACATCGTTTGTGAGGAAAGGT 57.791 42.857 0.00 0.00 37.11 3.50
3757 4098 4.345859 ACATCGTTTGTGAGGAAAGGTA 57.654 40.909 0.00 0.00 37.11 3.08
3758 4099 4.062991 ACATCGTTTGTGAGGAAAGGTAC 58.937 43.478 0.00 0.00 37.11 3.34
3759 4100 3.823281 TCGTTTGTGAGGAAAGGTACA 57.177 42.857 0.00 0.00 0.00 2.90
3760 4101 4.139859 TCGTTTGTGAGGAAAGGTACAA 57.860 40.909 0.00 0.00 0.00 2.41
3761 4102 4.710324 TCGTTTGTGAGGAAAGGTACAAT 58.290 39.130 0.00 0.00 33.56 2.71
3762 4103 4.753107 TCGTTTGTGAGGAAAGGTACAATC 59.247 41.667 0.00 0.00 33.56 2.67
3763 4104 4.755123 CGTTTGTGAGGAAAGGTACAATCT 59.245 41.667 0.00 0.00 33.56 2.40
3764 4105 5.107065 CGTTTGTGAGGAAAGGTACAATCTC 60.107 44.000 0.00 0.00 33.56 2.75
3765 4106 5.560722 TTGTGAGGAAAGGTACAATCTCA 57.439 39.130 0.00 0.00 0.00 3.27
3766 4107 5.560722 TGTGAGGAAAGGTACAATCTCAA 57.439 39.130 0.00 0.00 0.00 3.02
3767 4108 6.126863 TGTGAGGAAAGGTACAATCTCAAT 57.873 37.500 0.00 0.00 0.00 2.57
3768 4109 6.173339 TGTGAGGAAAGGTACAATCTCAATC 58.827 40.000 0.00 0.00 0.00 2.67
3769 4110 6.173339 GTGAGGAAAGGTACAATCTCAATCA 58.827 40.000 0.00 0.00 0.00 2.57
3770 4111 6.825721 GTGAGGAAAGGTACAATCTCAATCAT 59.174 38.462 0.00 0.00 0.00 2.45
3771 4112 7.987458 GTGAGGAAAGGTACAATCTCAATCATA 59.013 37.037 0.00 0.00 0.00 2.15
3772 4113 8.206867 TGAGGAAAGGTACAATCTCAATCATAG 58.793 37.037 0.00 0.00 0.00 2.23
3773 4114 8.324191 AGGAAAGGTACAATCTCAATCATAGA 57.676 34.615 0.00 0.00 0.00 1.98
3774 4115 8.207545 AGGAAAGGTACAATCTCAATCATAGAC 58.792 37.037 0.00 0.00 0.00 2.59
3775 4116 8.207545 GGAAAGGTACAATCTCAATCATAGACT 58.792 37.037 0.00 0.00 0.00 3.24
3776 4117 9.255304 GAAAGGTACAATCTCAATCATAGACTC 57.745 37.037 0.00 0.00 0.00 3.36
3777 4118 7.296628 AGGTACAATCTCAATCATAGACTCC 57.703 40.000 0.00 0.00 0.00 3.85
3778 4119 7.072562 AGGTACAATCTCAATCATAGACTCCT 58.927 38.462 0.00 0.00 0.00 3.69
3779 4120 7.232534 AGGTACAATCTCAATCATAGACTCCTC 59.767 40.741 0.00 0.00 0.00 3.71
3780 4121 7.014711 GGTACAATCTCAATCATAGACTCCTCA 59.985 40.741 0.00 0.00 0.00 3.86
3781 4122 7.429374 ACAATCTCAATCATAGACTCCTCAA 57.571 36.000 0.00 0.00 0.00 3.02
3782 4123 7.855375 ACAATCTCAATCATAGACTCCTCAAA 58.145 34.615 0.00 0.00 0.00 2.69
3783 4124 7.768120 ACAATCTCAATCATAGACTCCTCAAAC 59.232 37.037 0.00 0.00 0.00 2.93
3784 4125 6.227298 TCTCAATCATAGACTCCTCAAACC 57.773 41.667 0.00 0.00 0.00 3.27
3785 4126 5.721480 TCTCAATCATAGACTCCTCAAACCA 59.279 40.000 0.00 0.00 0.00 3.67
3786 4127 6.213397 TCTCAATCATAGACTCCTCAAACCAA 59.787 38.462 0.00 0.00 0.00 3.67
3787 4128 6.962182 TCAATCATAGACTCCTCAAACCAAT 58.038 36.000 0.00 0.00 0.00 3.16
3788 4129 7.050377 TCAATCATAGACTCCTCAAACCAATC 58.950 38.462 0.00 0.00 0.00 2.67
3789 4130 6.566079 ATCATAGACTCCTCAAACCAATCA 57.434 37.500 0.00 0.00 0.00 2.57
3790 4131 6.373005 TCATAGACTCCTCAAACCAATCAA 57.627 37.500 0.00 0.00 0.00 2.57
3791 4132 6.173339 TCATAGACTCCTCAAACCAATCAAC 58.827 40.000 0.00 0.00 0.00 3.18
3792 4133 4.437682 AGACTCCTCAAACCAATCAACA 57.562 40.909 0.00 0.00 0.00 3.33
3793 4134 4.392940 AGACTCCTCAAACCAATCAACAG 58.607 43.478 0.00 0.00 0.00 3.16
3794 4135 4.137543 GACTCCTCAAACCAATCAACAGT 58.862 43.478 0.00 0.00 0.00 3.55
3795 4136 5.071788 AGACTCCTCAAACCAATCAACAGTA 59.928 40.000 0.00 0.00 0.00 2.74
3796 4137 5.308825 ACTCCTCAAACCAATCAACAGTAG 58.691 41.667 0.00 0.00 0.00 2.57
3797 4138 5.071788 ACTCCTCAAACCAATCAACAGTAGA 59.928 40.000 0.00 0.00 0.00 2.59
3798 4139 5.935945 TCCTCAAACCAATCAACAGTAGAA 58.064 37.500 0.00 0.00 0.00 2.10
3799 4140 5.997746 TCCTCAAACCAATCAACAGTAGAAG 59.002 40.000 0.00 0.00 0.00 2.85
3800 4141 5.997746 CCTCAAACCAATCAACAGTAGAAGA 59.002 40.000 0.00 0.00 0.00 2.87
3801 4142 6.486657 CCTCAAACCAATCAACAGTAGAAGAA 59.513 38.462 0.00 0.00 0.00 2.52
3802 4143 7.013274 CCTCAAACCAATCAACAGTAGAAGAAA 59.987 37.037 0.00 0.00 0.00 2.52
3803 4144 8.287439 TCAAACCAATCAACAGTAGAAGAAAA 57.713 30.769 0.00 0.00 0.00 2.29
3804 4145 8.912988 TCAAACCAATCAACAGTAGAAGAAAAT 58.087 29.630 0.00 0.00 0.00 1.82
3805 4146 9.185192 CAAACCAATCAACAGTAGAAGAAAATC 57.815 33.333 0.00 0.00 0.00 2.17
3806 4147 8.697507 AACCAATCAACAGTAGAAGAAAATCT 57.302 30.769 0.00 0.00 0.00 2.40
3807 4148 9.793259 AACCAATCAACAGTAGAAGAAAATCTA 57.207 29.630 0.00 0.00 0.00 1.98
3808 4149 9.442047 ACCAATCAACAGTAGAAGAAAATCTAG 57.558 33.333 0.00 0.00 32.72 2.43
3809 4150 8.394121 CCAATCAACAGTAGAAGAAAATCTAGC 58.606 37.037 0.00 0.00 32.72 3.42
3810 4151 8.394121 CAATCAACAGTAGAAGAAAATCTAGCC 58.606 37.037 0.00 0.00 32.72 3.93
3811 4152 7.004555 TCAACAGTAGAAGAAAATCTAGCCA 57.995 36.000 0.00 0.00 32.72 4.75
3812 4153 7.450074 TCAACAGTAGAAGAAAATCTAGCCAA 58.550 34.615 0.00 0.00 32.72 4.52
3813 4154 7.387948 TCAACAGTAGAAGAAAATCTAGCCAAC 59.612 37.037 0.00 0.00 32.72 3.77
3814 4155 6.174049 ACAGTAGAAGAAAATCTAGCCAACC 58.826 40.000 0.00 0.00 32.72 3.77
3815 4156 6.013293 ACAGTAGAAGAAAATCTAGCCAACCT 60.013 38.462 0.00 0.00 32.72 3.50
3816 4157 7.180408 ACAGTAGAAGAAAATCTAGCCAACCTA 59.820 37.037 0.00 0.00 32.72 3.08
3817 4158 7.708752 CAGTAGAAGAAAATCTAGCCAACCTAG 59.291 40.741 0.00 0.00 44.09 3.02
3818 4159 5.432645 AGAAGAAAATCTAGCCAACCTAGC 58.567 41.667 0.00 0.00 42.73 3.42
3819 4160 4.844349 AGAAAATCTAGCCAACCTAGCA 57.156 40.909 0.00 0.00 42.73 3.49
3820 4161 5.179452 AGAAAATCTAGCCAACCTAGCAA 57.821 39.130 0.00 0.00 42.73 3.91
3821 4162 5.189180 AGAAAATCTAGCCAACCTAGCAAG 58.811 41.667 0.00 0.00 42.73 4.01
3822 4163 2.629336 ATCTAGCCAACCTAGCAAGC 57.371 50.000 0.00 0.00 42.73 4.01
3823 4164 1.573108 TCTAGCCAACCTAGCAAGCT 58.427 50.000 0.00 0.00 42.73 3.74
3824 4165 1.482593 TCTAGCCAACCTAGCAAGCTC 59.517 52.381 0.00 0.00 42.73 4.09
3825 4166 0.175760 TAGCCAACCTAGCAAGCTCG 59.824 55.000 0.00 0.00 35.03 5.03
3826 4167 1.376037 GCCAACCTAGCAAGCTCGT 60.376 57.895 0.00 0.00 0.00 4.18
3827 4168 1.639298 GCCAACCTAGCAAGCTCGTG 61.639 60.000 0.00 0.00 0.00 4.35
3828 4169 1.639298 CCAACCTAGCAAGCTCGTGC 61.639 60.000 1.95 1.95 45.28 5.34
3835 4176 3.349006 CAAGCTCGTGCGCAACCT 61.349 61.111 14.00 2.68 45.42 3.50
3836 4177 2.591715 AAGCTCGTGCGCAACCTT 60.592 55.556 14.00 9.50 45.42 3.50
3837 4178 1.301401 AAGCTCGTGCGCAACCTTA 60.301 52.632 14.00 0.00 45.42 2.69
3838 4179 0.673644 AAGCTCGTGCGCAACCTTAT 60.674 50.000 14.00 0.00 45.42 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.543208 GGAGGTTGCGCATATCCATCA 60.543 52.381 23.65 0.86 0.00 3.07
1 2 1.160137 GGAGGTTGCGCATATCCATC 58.840 55.000 23.65 17.56 0.00 3.51
2 3 0.767375 AGGAGGTTGCGCATATCCAT 59.233 50.000 27.71 15.68 32.21 3.41
3 4 0.546122 AAGGAGGTTGCGCATATCCA 59.454 50.000 27.71 6.72 32.21 3.41
4 5 2.543777 TAAGGAGGTTGCGCATATCC 57.456 50.000 21.99 21.99 0.00 2.59
5 6 5.438761 AAATTAAGGAGGTTGCGCATATC 57.561 39.130 12.75 9.82 0.00 1.63
6 7 5.451798 CCAAAATTAAGGAGGTTGCGCATAT 60.452 40.000 12.75 0.00 0.00 1.78
7 8 4.142271 CCAAAATTAAGGAGGTTGCGCATA 60.142 41.667 12.75 0.00 0.00 3.14
8 9 3.368323 CCAAAATTAAGGAGGTTGCGCAT 60.368 43.478 12.75 0.00 0.00 4.73
9 10 2.029470 CCAAAATTAAGGAGGTTGCGCA 60.029 45.455 5.66 5.66 0.00 6.09
10 11 2.606108 CCAAAATTAAGGAGGTTGCGC 58.394 47.619 0.00 0.00 0.00 6.09
11 12 2.029470 TGCCAAAATTAAGGAGGTTGCG 60.029 45.455 0.48 0.00 0.00 4.85
30 32 9.928236 TTAATTTTAGCAAGATTGTTTTGTTGC 57.072 25.926 0.00 0.00 44.60 4.17
45 47 9.733556 TTGACCTATTCAGACTTAATTTTAGCA 57.266 29.630 0.00 0.00 34.94 3.49
58 60 3.056107 CCGACCAACTTGACCTATTCAGA 60.056 47.826 0.00 0.00 34.94 3.27
63 65 0.981183 TGCCGACCAACTTGACCTAT 59.019 50.000 0.00 0.00 0.00 2.57
67 69 1.197721 CTTCATGCCGACCAACTTGAC 59.802 52.381 0.00 0.00 0.00 3.18
77 79 2.037121 TGTTCAGTTCTCTTCATGCCGA 59.963 45.455 0.00 0.00 0.00 5.54
78 80 2.416747 TGTTCAGTTCTCTTCATGCCG 58.583 47.619 0.00 0.00 0.00 5.69
89 91 9.399403 GACTAATCTTTTGGAATTGTTCAGTTC 57.601 33.333 0.46 0.46 0.00 3.01
92 94 9.403110 CAAGACTAATCTTTTGGAATTGTTCAG 57.597 33.333 0.00 0.00 42.91 3.02
101 103 6.037500 CGATGCATCAAGACTAATCTTTTGGA 59.962 38.462 25.70 0.00 42.91 3.53
111 113 3.525268 TTCTGCGATGCATCAAGACTA 57.475 42.857 25.70 11.11 38.13 2.59
152 155 2.800250 CTCCAGGTCTTGATGGCTTTT 58.200 47.619 0.00 0.00 36.47 2.27
153 156 1.615384 GCTCCAGGTCTTGATGGCTTT 60.615 52.381 0.00 0.00 36.47 3.51
156 159 0.034670 AAGCTCCAGGTCTTGATGGC 60.035 55.000 0.00 0.00 36.47 4.40
163 166 4.327680 GAACATAACAAAGCTCCAGGTCT 58.672 43.478 0.00 0.00 0.00 3.85
192 195 2.737376 GTGAGGGTCGCGGTGTTC 60.737 66.667 6.13 0.08 0.00 3.18
202 205 1.912043 CCTTCAAGATGAGGTGAGGGT 59.088 52.381 0.00 0.00 36.51 4.34
204 207 2.170187 CTCCCTTCAAGATGAGGTGAGG 59.830 54.545 0.00 0.00 0.00 3.86
213 216 2.355209 GCCGACTTTCTCCCTTCAAGAT 60.355 50.000 0.00 0.00 0.00 2.40
218 221 1.807142 CAAAGCCGACTTTCTCCCTTC 59.193 52.381 0.00 0.00 44.41 3.46
219 222 1.545651 CCAAAGCCGACTTTCTCCCTT 60.546 52.381 0.00 0.00 44.41 3.95
220 223 0.036875 CCAAAGCCGACTTTCTCCCT 59.963 55.000 0.00 0.00 44.41 4.20
221 224 0.036306 TCCAAAGCCGACTTTCTCCC 59.964 55.000 0.00 0.00 44.41 4.30
223 226 2.979240 AGATCCAAAGCCGACTTTCTC 58.021 47.619 0.00 0.00 44.41 2.87
225 228 2.814336 ACAAGATCCAAAGCCGACTTTC 59.186 45.455 0.00 0.00 44.41 2.62
232 487 3.440522 GGTGAAGTACAAGATCCAAAGCC 59.559 47.826 0.00 0.00 0.00 4.35
272 527 6.560003 AAACAAAAGAAGGATGAAACCCTT 57.440 33.333 0.00 0.00 46.03 3.95
299 554 6.576185 AGTCAAAGATTTCACAGCACAATTT 58.424 32.000 0.00 0.00 0.00 1.82
302 557 5.450412 GGAAGTCAAAGATTTCACAGCACAA 60.450 40.000 4.95 0.00 31.33 3.33
309 564 8.037758 TCTAGATGAGGAAGTCAAAGATTTCAC 58.962 37.037 4.95 0.32 39.19 3.18
325 580 6.804295 GCTCAAACGTATGTATCTAGATGAGG 59.196 42.308 15.79 6.27 33.10 3.86
329 584 6.315091 ACGCTCAAACGTATGTATCTAGAT 57.685 37.500 10.73 10.73 46.19 1.98
349 604 0.302589 CGCCGGGAATTAGTTAACGC 59.697 55.000 2.18 0.00 0.00 4.84
351 606 3.169355 TCTCGCCGGGAATTAGTTAAC 57.831 47.619 2.18 0.00 0.00 2.01
366 621 5.531287 ACCATTTTGGGATATACTTTCTCGC 59.469 40.000 0.00 0.00 43.37 5.03
367 622 7.282224 TGAACCATTTTGGGATATACTTTCTCG 59.718 37.037 0.00 0.00 43.37 4.04
387 643 0.398696 TTAGCGAGGCCTTTGAACCA 59.601 50.000 6.77 0.00 0.00 3.67
395 651 0.912486 AGATGGTTTTAGCGAGGCCT 59.088 50.000 3.86 3.86 0.00 5.19
412 668 5.422145 GTGACGCTTTAGGGGTTATTAAGA 58.578 41.667 0.00 0.00 41.29 2.10
418 674 1.276989 CTGGTGACGCTTTAGGGGTTA 59.723 52.381 0.00 0.00 41.29 2.85
436 692 5.728471 AGGTATGTGTGATCTCAGTTTCTG 58.272 41.667 0.00 0.00 0.00 3.02
441 697 4.323792 CCCAAAGGTATGTGTGATCTCAGT 60.324 45.833 0.00 0.00 0.00 3.41
499 755 0.832626 TGGTGATGATGATGGCGAGT 59.167 50.000 0.00 0.00 0.00 4.18
530 786 0.895530 TGGTTGCGGTTGTTTGGAAA 59.104 45.000 0.00 0.00 0.00 3.13
596 852 5.693961 TGATTACAGTATTGCCCATCATGT 58.306 37.500 0.00 0.00 0.00 3.21
803 1059 3.067320 GCAATCTTTGGGAAGTCCATAGC 59.933 47.826 0.00 0.00 46.52 2.97
844 1100 4.002506 TCTGCGCAAAGAGGCCGA 62.003 61.111 13.05 0.00 0.00 5.54
883 1145 4.410400 AAAAGGGCGAGGGCGAGG 62.410 66.667 0.00 0.00 41.24 4.63
884 1146 3.127533 CAAAAGGGCGAGGGCGAG 61.128 66.667 0.00 0.00 41.24 5.03
927 1189 6.463360 CCAGGCATGTGTGTGTGTATATATA 58.537 40.000 0.00 0.00 0.00 0.86
928 1190 5.308014 CCAGGCATGTGTGTGTGTATATAT 58.692 41.667 0.00 0.00 0.00 0.86
935 1197 2.922950 GCCCAGGCATGTGTGTGTG 61.923 63.158 3.12 0.00 41.49 3.82
950 1212 2.572290 GTAATGGTAGTCATGGTGCCC 58.428 52.381 0.00 0.00 35.99 5.36
967 1229 1.654317 AAAGTTGCGTGTGGTCGTAA 58.346 45.000 0.00 0.00 33.63 3.18
982 1244 3.081061 TCATGCAGCAACCGATTAAAGT 58.919 40.909 0.00 0.00 0.00 2.66
992 1254 4.691860 ACTTTCTGTATCATGCAGCAAC 57.308 40.909 0.00 0.00 34.21 4.17
1288 1562 9.586435 ACAAGAAAACCAAATAGAAAAGAGTTG 57.414 29.630 0.00 0.00 0.00 3.16
1466 1755 6.964370 CGTTGTTTGATTTGTTCTCTTACACA 59.036 34.615 0.00 0.00 0.00 3.72
1492 1781 2.437180 TGATGCAAGAGGCTGCGG 60.437 61.111 0.00 0.00 45.74 5.69
1512 1817 6.038825 CCAACATCTACCAAACAACAACACTA 59.961 38.462 0.00 0.00 0.00 2.74
1543 1848 1.420138 GGGTGGGTTCTTCTCAACTGA 59.580 52.381 0.00 0.00 34.06 3.41
1592 1901 1.135315 GTGCATGCTACTGCGTTGG 59.865 57.895 20.33 0.00 45.30 3.77
1596 1905 1.699656 GAGTGGTGCATGCTACTGCG 61.700 60.000 20.33 0.00 45.30 5.18
1597 1906 0.674581 TGAGTGGTGCATGCTACTGC 60.675 55.000 20.33 13.46 42.62 4.40
1670 1981 6.460537 GGGAGTAAAACGATCCTTTGTTTGTT 60.461 38.462 0.00 0.00 39.04 2.83
1676 1987 4.575885 TCTGGGAGTAAAACGATCCTTTG 58.424 43.478 0.00 0.00 33.40 2.77
1717 2028 2.291741 GGAAACAACAAGACTCTGCAGG 59.708 50.000 15.13 7.28 0.00 4.85
1758 2069 5.615289 AGTTTTGCTTCAGTCTCACACTAT 58.385 37.500 0.00 0.00 32.21 2.12
1769 2080 6.073222 AGGTAACGTTATGAGTTTTGCTTCAG 60.073 38.462 11.86 0.00 46.39 3.02
1776 2087 6.301486 AGGGAAAGGTAACGTTATGAGTTTT 58.699 36.000 11.86 7.95 46.39 2.43
1880 2191 9.502091 TGTAAGTCTTTGTATGTCTAGCATTTT 57.498 29.630 5.22 0.00 38.94 1.82
1881 2192 8.936864 GTGTAAGTCTTTGTATGTCTAGCATTT 58.063 33.333 5.22 0.00 38.94 2.32
1882 2193 7.275779 CGTGTAAGTCTTTGTATGTCTAGCATT 59.724 37.037 5.22 0.00 38.94 3.56
1883 2194 6.752351 CGTGTAAGTCTTTGTATGTCTAGCAT 59.248 38.462 0.00 5.25 41.42 3.79
1884 2195 6.090783 CGTGTAAGTCTTTGTATGTCTAGCA 58.909 40.000 0.00 0.00 0.00 3.49
1885 2196 6.091437 ACGTGTAAGTCTTTGTATGTCTAGC 58.909 40.000 0.00 0.00 0.00 3.42
1886 2197 8.516811 AAACGTGTAAGTCTTTGTATGTCTAG 57.483 34.615 0.00 0.00 0.00 2.43
1887 2198 8.876275 AAAACGTGTAAGTCTTTGTATGTCTA 57.124 30.769 0.00 0.00 0.00 2.59
1888 2199 7.781548 AAAACGTGTAAGTCTTTGTATGTCT 57.218 32.000 0.00 0.00 0.00 3.41
1889 2200 9.361712 GTAAAAACGTGTAAGTCTTTGTATGTC 57.638 33.333 0.00 0.00 0.00 3.06
1890 2201 8.881743 TGTAAAAACGTGTAAGTCTTTGTATGT 58.118 29.630 0.00 0.00 0.00 2.29
1891 2202 9.150653 GTGTAAAAACGTGTAAGTCTTTGTATG 57.849 33.333 0.00 0.00 0.00 2.39
1892 2203 8.057742 CGTGTAAAAACGTGTAAGTCTTTGTAT 58.942 33.333 0.00 0.00 38.74 2.29
1893 2204 7.390247 CGTGTAAAAACGTGTAAGTCTTTGTA 58.610 34.615 0.00 0.00 38.74 2.41
1894 2205 6.242829 CGTGTAAAAACGTGTAAGTCTTTGT 58.757 36.000 0.00 0.00 38.74 2.83
1895 2206 5.168329 GCGTGTAAAAACGTGTAAGTCTTTG 59.832 40.000 0.00 0.00 45.32 2.77
1896 2207 5.063817 AGCGTGTAAAAACGTGTAAGTCTTT 59.936 36.000 0.00 0.00 45.32 2.52
1897 2208 4.567959 AGCGTGTAAAAACGTGTAAGTCTT 59.432 37.500 0.00 0.00 45.32 3.01
1898 2209 4.114794 AGCGTGTAAAAACGTGTAAGTCT 58.885 39.130 0.00 0.00 45.32 3.24
1899 2210 4.440068 GAGCGTGTAAAAACGTGTAAGTC 58.560 43.478 0.00 0.00 45.32 3.01
1900 2211 3.245990 GGAGCGTGTAAAAACGTGTAAGT 59.754 43.478 0.00 0.00 45.32 2.24
1901 2212 3.492011 AGGAGCGTGTAAAAACGTGTAAG 59.508 43.478 0.00 0.00 45.32 2.34
1902 2213 3.456280 AGGAGCGTGTAAAAACGTGTAA 58.544 40.909 0.00 0.00 45.32 2.41
1903 2214 3.096489 AGGAGCGTGTAAAAACGTGTA 57.904 42.857 0.00 0.00 45.32 2.90
1904 2215 1.944032 AGGAGCGTGTAAAAACGTGT 58.056 45.000 0.00 0.00 45.32 4.49
1905 2216 2.349155 GGAAGGAGCGTGTAAAAACGTG 60.349 50.000 0.00 0.00 45.32 4.49
1906 2217 1.869132 GGAAGGAGCGTGTAAAAACGT 59.131 47.619 0.00 0.00 45.32 3.99
1907 2218 1.868498 TGGAAGGAGCGTGTAAAAACG 59.132 47.619 0.00 0.00 46.30 3.60
1908 2219 3.751698 AGATGGAAGGAGCGTGTAAAAAC 59.248 43.478 0.00 0.00 0.00 2.43
1909 2220 4.015872 AGATGGAAGGAGCGTGTAAAAA 57.984 40.909 0.00 0.00 0.00 1.94
1910 2221 3.695830 AGATGGAAGGAGCGTGTAAAA 57.304 42.857 0.00 0.00 0.00 1.52
1911 2222 4.020928 TGTTAGATGGAAGGAGCGTGTAAA 60.021 41.667 0.00 0.00 0.00 2.01
1912 2223 3.512329 TGTTAGATGGAAGGAGCGTGTAA 59.488 43.478 0.00 0.00 0.00 2.41
1913 2224 3.093814 TGTTAGATGGAAGGAGCGTGTA 58.906 45.455 0.00 0.00 0.00 2.90
1914 2225 1.899814 TGTTAGATGGAAGGAGCGTGT 59.100 47.619 0.00 0.00 0.00 4.49
1915 2226 2.672961 TGTTAGATGGAAGGAGCGTG 57.327 50.000 0.00 0.00 0.00 5.34
1916 2227 2.354805 GGTTGTTAGATGGAAGGAGCGT 60.355 50.000 0.00 0.00 0.00 5.07
1917 2228 2.280628 GGTTGTTAGATGGAAGGAGCG 58.719 52.381 0.00 0.00 0.00 5.03
1918 2229 3.350219 TGGTTGTTAGATGGAAGGAGC 57.650 47.619 0.00 0.00 0.00 4.70
1919 2230 5.355350 GTGATTGGTTGTTAGATGGAAGGAG 59.645 44.000 0.00 0.00 0.00 3.69
1920 2231 5.222027 TGTGATTGGTTGTTAGATGGAAGGA 60.222 40.000 0.00 0.00 0.00 3.36
1921 2232 5.009631 TGTGATTGGTTGTTAGATGGAAGG 58.990 41.667 0.00 0.00 0.00 3.46
1922 2233 6.573664 TTGTGATTGGTTGTTAGATGGAAG 57.426 37.500 0.00 0.00 0.00 3.46
1923 2234 6.239176 GGTTTGTGATTGGTTGTTAGATGGAA 60.239 38.462 0.00 0.00 0.00 3.53
1924 2235 5.242838 GGTTTGTGATTGGTTGTTAGATGGA 59.757 40.000 0.00 0.00 0.00 3.41
1925 2236 5.243730 AGGTTTGTGATTGGTTGTTAGATGG 59.756 40.000 0.00 0.00 0.00 3.51
1926 2237 6.207417 AGAGGTTTGTGATTGGTTGTTAGATG 59.793 38.462 0.00 0.00 0.00 2.90
1927 2238 6.306987 AGAGGTTTGTGATTGGTTGTTAGAT 58.693 36.000 0.00 0.00 0.00 1.98
1928 2239 5.690865 AGAGGTTTGTGATTGGTTGTTAGA 58.309 37.500 0.00 0.00 0.00 2.10
1929 2240 5.048713 GGAGAGGTTTGTGATTGGTTGTTAG 60.049 44.000 0.00 0.00 0.00 2.34
1930 2241 4.825085 GGAGAGGTTTGTGATTGGTTGTTA 59.175 41.667 0.00 0.00 0.00 2.41
1931 2242 3.636764 GGAGAGGTTTGTGATTGGTTGTT 59.363 43.478 0.00 0.00 0.00 2.83
1932 2243 3.222603 GGAGAGGTTTGTGATTGGTTGT 58.777 45.455 0.00 0.00 0.00 3.32
1933 2244 2.558359 GGGAGAGGTTTGTGATTGGTTG 59.442 50.000 0.00 0.00 0.00 3.77
1934 2245 2.490902 GGGGAGAGGTTTGTGATTGGTT 60.491 50.000 0.00 0.00 0.00 3.67
1935 2246 1.075536 GGGGAGAGGTTTGTGATTGGT 59.924 52.381 0.00 0.00 0.00 3.67
1936 2247 1.616994 GGGGGAGAGGTTTGTGATTGG 60.617 57.143 0.00 0.00 0.00 3.16
1937 2248 1.839424 GGGGGAGAGGTTTGTGATTG 58.161 55.000 0.00 0.00 0.00 2.67
1960 2271 3.566351 GGTCCATCCCCTGAAAATTAGG 58.434 50.000 0.00 0.00 35.01 2.69
1961 2272 3.214328 CGGTCCATCCCCTGAAAATTAG 58.786 50.000 0.00 0.00 0.00 1.73
1962 2273 2.578940 ACGGTCCATCCCCTGAAAATTA 59.421 45.455 0.00 0.00 0.00 1.40
1963 2274 1.357761 ACGGTCCATCCCCTGAAAATT 59.642 47.619 0.00 0.00 0.00 1.82
1964 2275 0.999712 ACGGTCCATCCCCTGAAAAT 59.000 50.000 0.00 0.00 0.00 1.82
1965 2276 0.326927 GACGGTCCATCCCCTGAAAA 59.673 55.000 0.00 0.00 0.00 2.29
1966 2277 1.559065 GGACGGTCCATCCCCTGAAA 61.559 60.000 22.10 0.00 36.28 2.69
1967 2278 1.993391 GGACGGTCCATCCCCTGAA 60.993 63.158 22.10 0.00 36.28 3.02
1968 2279 2.365105 GGACGGTCCATCCCCTGA 60.365 66.667 22.10 0.00 36.28 3.86
1969 2280 3.849951 CGGACGGTCCATCCCCTG 61.850 72.222 25.80 4.87 35.91 4.45
1972 2283 4.222847 GAGCGGACGGTCCATCCC 62.223 72.222 25.80 11.20 35.91 3.85
1973 2284 3.458163 TGAGCGGACGGTCCATCC 61.458 66.667 25.80 13.53 41.45 3.51
1974 2285 2.202756 GTGAGCGGACGGTCCATC 60.203 66.667 25.80 21.50 41.45 3.51
1975 2286 2.849096 TAGGTGAGCGGACGGTCCAT 62.849 60.000 25.80 14.24 41.45 3.41
1976 2287 2.849096 ATAGGTGAGCGGACGGTCCA 62.849 60.000 25.80 4.37 41.45 4.02
1977 2288 1.673808 AATAGGTGAGCGGACGGTCC 61.674 60.000 17.38 17.38 41.45 4.46
1978 2289 0.527817 CAATAGGTGAGCGGACGGTC 60.528 60.000 16.09 16.09 42.37 4.79
1979 2290 0.968901 TCAATAGGTGAGCGGACGGT 60.969 55.000 0.00 0.00 0.00 4.83
1980 2291 0.527817 GTCAATAGGTGAGCGGACGG 60.528 60.000 0.00 0.00 36.74 4.79
1981 2292 0.527817 GGTCAATAGGTGAGCGGACG 60.528 60.000 0.00 0.00 44.38 4.79
1982 2293 3.364277 GGTCAATAGGTGAGCGGAC 57.636 57.895 0.00 0.00 44.38 4.79
1987 2298 8.616076 GTTAATCTTGATTGGTCAATAGGTGAG 58.384 37.037 6.15 0.00 43.08 3.51
1988 2299 7.556275 GGTTAATCTTGATTGGTCAATAGGTGA 59.444 37.037 6.15 0.00 43.08 4.02
1989 2300 7.339212 TGGTTAATCTTGATTGGTCAATAGGTG 59.661 37.037 6.15 0.00 43.08 4.00
1990 2301 7.410174 TGGTTAATCTTGATTGGTCAATAGGT 58.590 34.615 6.15 0.00 43.08 3.08
1991 2302 7.880160 TGGTTAATCTTGATTGGTCAATAGG 57.120 36.000 6.15 0.00 43.08 2.57
1992 2303 8.571336 GGATGGTTAATCTTGATTGGTCAATAG 58.429 37.037 6.15 0.00 43.08 1.73
1993 2304 8.281531 AGGATGGTTAATCTTGATTGGTCAATA 58.718 33.333 6.15 0.00 43.08 1.90
1994 2305 7.069085 CAGGATGGTTAATCTTGATTGGTCAAT 59.931 37.037 6.15 0.00 43.40 2.57
1995 2306 6.377996 CAGGATGGTTAATCTTGATTGGTCAA 59.622 38.462 6.15 0.00 43.40 3.18
1996 2307 5.887598 CAGGATGGTTAATCTTGATTGGTCA 59.112 40.000 6.15 2.60 43.40 4.02
1997 2308 5.888161 ACAGGATGGTTAATCTTGATTGGTC 59.112 40.000 6.15 0.00 43.40 4.02
1998 2309 5.831103 ACAGGATGGTTAATCTTGATTGGT 58.169 37.500 6.15 0.00 43.40 3.67
1999 2310 7.880160 TTACAGGATGGTTAATCTTGATTGG 57.120 36.000 6.15 0.00 43.40 3.16
2000 2311 9.793252 CTTTTACAGGATGGTTAATCTTGATTG 57.207 33.333 6.15 0.00 43.40 2.67
2001 2312 8.470002 GCTTTTACAGGATGGTTAATCTTGATT 58.530 33.333 4.67 1.35 43.40 2.57
2002 2313 7.068716 GGCTTTTACAGGATGGTTAATCTTGAT 59.931 37.037 4.67 0.00 43.40 2.57
2003 2314 6.377146 GGCTTTTACAGGATGGTTAATCTTGA 59.623 38.462 4.67 0.00 43.40 3.02
2004 2315 6.378280 AGGCTTTTACAGGATGGTTAATCTTG 59.622 38.462 0.00 0.00 45.55 3.02
2005 2316 6.378280 CAGGCTTTTACAGGATGGTTAATCTT 59.622 38.462 0.00 0.00 43.62 2.40
2006 2317 5.888161 CAGGCTTTTACAGGATGGTTAATCT 59.112 40.000 0.00 0.00 43.62 2.40
2007 2318 5.652452 ACAGGCTTTTACAGGATGGTTAATC 59.348 40.000 0.00 0.00 43.62 1.75
2008 2319 5.580022 ACAGGCTTTTACAGGATGGTTAAT 58.420 37.500 0.00 0.00 43.62 1.40
2009 2320 4.993028 ACAGGCTTTTACAGGATGGTTAA 58.007 39.130 0.00 0.00 43.62 2.01
2010 2321 4.650972 ACAGGCTTTTACAGGATGGTTA 57.349 40.909 0.00 0.00 43.62 2.85
2011 2322 3.525800 ACAGGCTTTTACAGGATGGTT 57.474 42.857 0.00 0.00 43.62 3.67
2012 2323 4.650972 TTACAGGCTTTTACAGGATGGT 57.349 40.909 0.00 0.00 43.62 3.55
2013 2324 5.220854 CGATTTACAGGCTTTTACAGGATGG 60.221 44.000 0.00 0.00 43.62 3.51
2014 2325 5.354234 ACGATTTACAGGCTTTTACAGGATG 59.646 40.000 0.00 0.00 46.00 3.51
2015 2326 5.497474 ACGATTTACAGGCTTTTACAGGAT 58.503 37.500 0.00 0.00 0.00 3.24
2016 2327 4.901868 ACGATTTACAGGCTTTTACAGGA 58.098 39.130 0.00 0.00 0.00 3.86
2017 2328 5.622770 AACGATTTACAGGCTTTTACAGG 57.377 39.130 0.00 0.00 0.00 4.00
2018 2329 6.435428 ACAAACGATTTACAGGCTTTTACAG 58.565 36.000 0.00 0.00 0.00 2.74
2019 2330 6.380095 ACAAACGATTTACAGGCTTTTACA 57.620 33.333 0.00 0.00 0.00 2.41
2020 2331 7.771219 GTACAAACGATTTACAGGCTTTTAC 57.229 36.000 0.00 0.00 0.00 2.01
2037 2348 2.723618 CGGCAATGCTACACGTACAAAC 60.724 50.000 4.82 0.00 0.00 2.93
2038 2349 1.461512 CGGCAATGCTACACGTACAAA 59.538 47.619 4.82 0.00 0.00 2.83
2039 2350 1.072391 CGGCAATGCTACACGTACAA 58.928 50.000 4.82 0.00 0.00 2.41
2040 2351 0.038067 ACGGCAATGCTACACGTACA 60.038 50.000 4.82 0.00 35.85 2.90
2041 2352 1.912001 TACGGCAATGCTACACGTAC 58.088 50.000 4.82 0.00 38.79 3.67
2042 2353 2.651135 TTACGGCAATGCTACACGTA 57.349 45.000 4.82 7.76 38.79 3.57
2043 2354 2.018542 ATTACGGCAATGCTACACGT 57.981 45.000 4.82 8.83 41.10 4.49
2044 2355 4.523853 TTTATTACGGCAATGCTACACG 57.476 40.909 4.82 2.29 0.00 4.49
2045 2356 5.741982 CCTTTTTATTACGGCAATGCTACAC 59.258 40.000 4.82 0.00 0.00 2.90
2046 2357 5.648526 TCCTTTTTATTACGGCAATGCTACA 59.351 36.000 4.82 0.00 0.00 2.74
2047 2358 5.969435 GTCCTTTTTATTACGGCAATGCTAC 59.031 40.000 4.82 0.00 0.00 3.58
2048 2359 5.648526 TGTCCTTTTTATTACGGCAATGCTA 59.351 36.000 4.82 0.00 0.00 3.49
2049 2360 4.461081 TGTCCTTTTTATTACGGCAATGCT 59.539 37.500 4.82 0.00 0.00 3.79
2050 2361 4.739195 TGTCCTTTTTATTACGGCAATGC 58.261 39.130 0.00 0.00 0.00 3.56
2051 2362 5.949735 ACTGTCCTTTTTATTACGGCAATG 58.050 37.500 0.00 0.00 0.00 2.82
2052 2363 6.386654 CAACTGTCCTTTTTATTACGGCAAT 58.613 36.000 0.00 0.00 0.00 3.56
2053 2364 5.764131 CAACTGTCCTTTTTATTACGGCAA 58.236 37.500 0.00 0.00 0.00 4.52
2054 2365 4.320641 GCAACTGTCCTTTTTATTACGGCA 60.321 41.667 0.00 0.00 0.00 5.69
2055 2366 4.163552 GCAACTGTCCTTTTTATTACGGC 58.836 43.478 0.00 0.00 0.00 5.68
2056 2367 4.216687 TGGCAACTGTCCTTTTTATTACGG 59.783 41.667 0.00 0.00 37.61 4.02
2057 2368 5.151389 GTGGCAACTGTCCTTTTTATTACG 58.849 41.667 0.00 0.00 37.61 3.18
2058 2369 5.466819 GGTGGCAACTGTCCTTTTTATTAC 58.533 41.667 0.00 0.00 37.61 1.89
2059 2370 4.216687 CGGTGGCAACTGTCCTTTTTATTA 59.783 41.667 0.00 0.00 37.61 0.98
2060 2371 3.005367 CGGTGGCAACTGTCCTTTTTATT 59.995 43.478 0.00 0.00 37.61 1.40
2061 2372 2.556622 CGGTGGCAACTGTCCTTTTTAT 59.443 45.455 0.00 0.00 37.61 1.40
2062 2373 1.950909 CGGTGGCAACTGTCCTTTTTA 59.049 47.619 0.00 0.00 37.61 1.52
2063 2374 0.744281 CGGTGGCAACTGTCCTTTTT 59.256 50.000 0.00 0.00 37.61 1.94
2064 2375 1.734388 GCGGTGGCAACTGTCCTTTT 61.734 55.000 0.00 0.00 39.62 2.27
2065 2376 2.193536 GCGGTGGCAACTGTCCTTT 61.194 57.895 0.00 0.00 39.62 3.11
2066 2377 2.594592 GCGGTGGCAACTGTCCTT 60.595 61.111 0.00 0.00 39.62 3.36
2067 2378 4.643387 GGCGGTGGCAACTGTCCT 62.643 66.667 0.00 0.00 42.47 3.85
2100 2411 6.430616 ACTGTACTGTACTAGTTCTGACTTCC 59.569 42.308 17.98 0.00 40.89 3.46
2115 2426 7.038729 AGGAGTAGTGTACTGTACTGTACTGTA 60.039 40.741 30.96 24.76 42.22 2.74
2116 2427 5.936956 GGAGTAGTGTACTGTACTGTACTGT 59.063 44.000 30.96 26.40 42.22 3.55
2117 2428 6.092396 CAGGAGTAGTGTACTGTACTGTACTG 59.908 46.154 30.96 19.36 42.22 2.74
2118 2429 6.171921 CAGGAGTAGTGTACTGTACTGTACT 58.828 44.000 30.96 21.83 42.22 2.73
2119 2430 5.163774 GCAGGAGTAGTGTACTGTACTGTAC 60.164 48.000 27.19 27.19 39.59 2.90
2120 2431 4.940046 GCAGGAGTAGTGTACTGTACTGTA 59.060 45.833 17.98 8.40 39.59 2.74
2121 2432 3.757493 GCAGGAGTAGTGTACTGTACTGT 59.243 47.826 17.98 10.46 39.59 3.55
2122 2433 3.128938 GGCAGGAGTAGTGTACTGTACTG 59.871 52.174 17.98 7.24 39.59 2.74
2144 2460 2.159720 TGCATCAACATTGCGTAGTTCG 60.160 45.455 0.00 0.00 43.10 3.95
2299 2617 3.159472 ACCATGTGTACGGTTCTGTCTA 58.841 45.455 0.00 0.00 28.43 2.59
2310 2645 3.034721 TGAAGGTTCGACCATGTGTAC 57.965 47.619 6.78 0.00 41.95 2.90
2312 2647 2.859165 ATGAAGGTTCGACCATGTGT 57.141 45.000 6.78 0.00 41.95 3.72
2314 2649 3.861840 CAGTATGAAGGTTCGACCATGT 58.138 45.455 6.78 0.00 38.86 3.21
2315 2650 2.609459 GCAGTATGAAGGTTCGACCATG 59.391 50.000 6.78 0.00 38.86 3.66
2316 2651 2.236146 TGCAGTATGAAGGTTCGACCAT 59.764 45.455 6.78 0.00 38.86 3.55
2317 2652 1.621317 TGCAGTATGAAGGTTCGACCA 59.379 47.619 6.78 0.00 38.86 4.02
2318 2653 2.380084 TGCAGTATGAAGGTTCGACC 57.620 50.000 0.00 0.00 39.69 4.79
2319 2654 4.946784 AAATGCAGTATGAAGGTTCGAC 57.053 40.909 0.00 0.00 39.69 4.20
2320 2655 5.240623 ACAAAAATGCAGTATGAAGGTTCGA 59.759 36.000 6.84 0.00 39.69 3.71
2321 2656 5.460646 ACAAAAATGCAGTATGAAGGTTCG 58.539 37.500 6.84 0.00 39.69 3.95
2322 2657 7.095649 GGAAACAAAAATGCAGTATGAAGGTTC 60.096 37.037 6.84 1.61 39.69 3.62
2323 2658 6.705825 GGAAACAAAAATGCAGTATGAAGGTT 59.294 34.615 6.84 0.00 39.69 3.50
2324 2659 6.041979 AGGAAACAAAAATGCAGTATGAAGGT 59.958 34.615 6.84 0.00 39.69 3.50
2325 2660 6.458210 AGGAAACAAAAATGCAGTATGAAGG 58.542 36.000 6.84 0.00 39.69 3.46
2326 2661 7.274250 GCTAGGAAACAAAAATGCAGTATGAAG 59.726 37.037 6.84 0.00 39.69 3.02
2327 2662 7.090173 GCTAGGAAACAAAAATGCAGTATGAA 58.910 34.615 6.84 0.00 39.69 2.57
2328 2663 6.208402 TGCTAGGAAACAAAAATGCAGTATGA 59.792 34.615 6.84 0.00 39.69 2.15
2329 2664 6.389091 TGCTAGGAAACAAAAATGCAGTATG 58.611 36.000 0.00 0.00 40.87 2.39
2330 2665 6.588719 TGCTAGGAAACAAAAATGCAGTAT 57.411 33.333 0.00 0.00 0.00 2.12
2557 2892 6.801575 TCTTGTTACATTCTGAAACCCAAAC 58.198 36.000 0.00 0.00 0.00 2.93
2569 2904 9.677567 TTGATAAACAAGCTTCTTGTTACATTC 57.322 29.630 20.89 15.70 41.30 2.67
2579 2914 6.161381 CCTGCAATTTGATAAACAAGCTTCT 58.839 36.000 0.00 0.00 39.77 2.85
2662 2997 2.290577 CCCTCTCTTTCCCCTTGAACAG 60.291 54.545 0.00 0.00 31.05 3.16
2676 3011 0.040499 GGTCAGTGTCCTCCCTCTCT 59.960 60.000 0.00 0.00 0.00 3.10
2810 3145 3.638592 ATAAAAGGCTGGCGCGGGT 62.639 57.895 8.83 0.00 36.88 5.28
2817 3152 2.514458 ACACCTGGATAAAAGGCTGG 57.486 50.000 0.00 0.00 38.48 4.85
2939 3274 1.450312 CACTCGGGCCATTCCAGAC 60.450 63.158 4.39 0.00 35.19 3.51
3164 3501 1.264020 CCATCCATAACCGATGCAACG 59.736 52.381 9.71 9.71 36.58 4.10
3172 3509 1.128200 TCCACTCCCATCCATAACCG 58.872 55.000 0.00 0.00 0.00 4.44
3174 3511 3.644966 TGTTCCACTCCCATCCATAAC 57.355 47.619 0.00 0.00 0.00 1.89
3191 3528 5.536161 AGGCACATACATCTTTGACTTTGTT 59.464 36.000 0.00 0.00 0.00 2.83
3344 3681 6.126409 ACACATTTACTCTCCCTGTTTTGAA 58.874 36.000 0.00 0.00 0.00 2.69
3348 3685 7.181125 AGAGATACACATTTACTCTCCCTGTTT 59.819 37.037 0.00 0.00 33.47 2.83
3354 3691 9.959749 CTAGAAAGAGATACACATTTACTCTCC 57.040 37.037 0.00 0.00 37.02 3.71
3373 3710 7.559897 AGAGGACAGATACTTCTTCCTAGAAAG 59.440 40.741 0.00 0.00 39.80 2.62
3375 3712 6.975949 AGAGGACAGATACTTCTTCCTAGAA 58.024 40.000 0.00 0.00 38.51 2.10
3376 3713 6.584471 AGAGGACAGATACTTCTTCCTAGA 57.416 41.667 0.00 0.00 38.51 2.43
3377 3714 7.488322 CAAAGAGGACAGATACTTCTTCCTAG 58.512 42.308 0.00 0.00 38.51 3.02
3378 3715 6.127310 GCAAAGAGGACAGATACTTCTTCCTA 60.127 42.308 0.00 0.00 38.51 2.94
3379 3716 5.337975 GCAAAGAGGACAGATACTTCTTCCT 60.338 44.000 0.00 0.00 39.83 3.36
3380 3717 4.873259 GCAAAGAGGACAGATACTTCTTCC 59.127 45.833 0.00 0.00 33.70 3.46
3381 3718 5.580297 CAGCAAAGAGGACAGATACTTCTTC 59.420 44.000 0.00 0.00 33.70 2.87
3422 3760 6.662755 AGATGCCCTTAATACATGTCTGAAA 58.337 36.000 0.00 0.00 0.00 2.69
3484 3822 2.108568 GGACTAGTCCTCTGTCCGC 58.891 63.158 31.12 4.56 46.16 5.54
3497 3837 1.544246 CACATCTGTGTCCGTGGACTA 59.456 52.381 19.17 8.20 44.80 2.59
3505 3845 1.078143 GGCTCCCACATCTGTGTCC 60.078 63.158 9.33 2.04 44.21 4.02
3522 3862 2.110352 GGTAACGTTGGATGGCCGG 61.110 63.158 11.99 0.00 36.79 6.13
3525 3865 2.757056 GCGGGTAACGTTGGATGGC 61.757 63.158 11.99 4.28 46.52 4.40
3552 3892 1.662876 CGGTCTGTTGAAATGCGGTTG 60.663 52.381 0.00 0.00 0.00 3.77
3563 3904 2.139917 TGAATTTCGTCCGGTCTGTTG 58.860 47.619 0.00 0.00 0.00 3.33
3566 3907 1.062587 GCATGAATTTCGTCCGGTCTG 59.937 52.381 0.00 0.00 0.00 3.51
3570 3911 2.627863 TTTGCATGAATTTCGTCCGG 57.372 45.000 0.00 0.00 0.00 5.14
3571 3912 2.661195 GGTTTTGCATGAATTTCGTCCG 59.339 45.455 0.00 0.00 0.00 4.79
3572 3913 2.661195 CGGTTTTGCATGAATTTCGTCC 59.339 45.455 0.00 0.00 0.00 4.79
3590 3931 5.278463 CCAAACTTTGATGAATTCTGTCGGT 60.278 40.000 7.05 3.67 0.00 4.69
3641 3982 9.613428 TTGTACTAGACTTATTTGCATGCTATT 57.387 29.630 20.33 10.41 0.00 1.73
3665 4006 8.955061 ATCTCGTTGATTTTGAACTATTGTTG 57.045 30.769 0.00 0.00 31.75 3.33
3708 4049 9.443323 TCTGTTATTTCGATTGAATAAAGTCCA 57.557 29.630 0.00 0.00 33.20 4.02
3716 4057 9.261180 ACGATGTATCTGTTATTTCGATTGAAT 57.739 29.630 0.00 0.00 33.20 2.57
3717 4058 8.642908 ACGATGTATCTGTTATTTCGATTGAA 57.357 30.769 0.00 0.00 0.00 2.69
3718 4059 8.642908 AACGATGTATCTGTTATTTCGATTGA 57.357 30.769 0.00 0.00 0.00 2.57
3719 4060 9.147364 CAAACGATGTATCTGTTATTTCGATTG 57.853 33.333 0.00 0.00 33.73 2.67
3720 4061 8.879759 ACAAACGATGTATCTGTTATTTCGATT 58.120 29.630 0.00 0.00 41.63 3.34
3721 4062 8.328146 CACAAACGATGTATCTGTTATTTCGAT 58.672 33.333 0.00 0.00 41.46 3.59
3722 4063 7.542824 TCACAAACGATGTATCTGTTATTTCGA 59.457 33.333 0.00 0.00 41.46 3.71
3723 4064 7.671827 TCACAAACGATGTATCTGTTATTTCG 58.328 34.615 0.00 0.00 41.46 3.46
3724 4065 8.116753 CCTCACAAACGATGTATCTGTTATTTC 58.883 37.037 0.00 0.00 41.46 2.17
3725 4066 7.822334 TCCTCACAAACGATGTATCTGTTATTT 59.178 33.333 0.00 0.00 41.46 1.40
3726 4067 7.327975 TCCTCACAAACGATGTATCTGTTATT 58.672 34.615 0.00 0.00 41.46 1.40
3727 4068 6.873997 TCCTCACAAACGATGTATCTGTTAT 58.126 36.000 0.00 0.00 41.46 1.89
3728 4069 6.275494 TCCTCACAAACGATGTATCTGTTA 57.725 37.500 0.00 0.00 41.46 2.41
3729 4070 5.147330 TCCTCACAAACGATGTATCTGTT 57.853 39.130 0.00 0.00 41.46 3.16
3730 4071 4.801330 TCCTCACAAACGATGTATCTGT 57.199 40.909 0.00 0.00 41.46 3.41
3731 4072 5.063944 CCTTTCCTCACAAACGATGTATCTG 59.936 44.000 0.00 0.00 41.46 2.90
3732 4073 5.178797 CCTTTCCTCACAAACGATGTATCT 58.821 41.667 0.00 0.00 41.46 1.98
3733 4074 4.935808 ACCTTTCCTCACAAACGATGTATC 59.064 41.667 0.00 0.00 41.46 2.24
3734 4075 4.906618 ACCTTTCCTCACAAACGATGTAT 58.093 39.130 0.00 0.00 41.46 2.29
3735 4076 4.345859 ACCTTTCCTCACAAACGATGTA 57.654 40.909 0.00 0.00 41.46 2.29
3736 4077 3.208747 ACCTTTCCTCACAAACGATGT 57.791 42.857 0.00 0.00 45.34 3.06
3737 4078 4.062293 TGTACCTTTCCTCACAAACGATG 58.938 43.478 0.00 0.00 0.00 3.84
3738 4079 4.345859 TGTACCTTTCCTCACAAACGAT 57.654 40.909 0.00 0.00 0.00 3.73
3739 4080 3.823281 TGTACCTTTCCTCACAAACGA 57.177 42.857 0.00 0.00 0.00 3.85
3740 4081 4.755123 AGATTGTACCTTTCCTCACAAACG 59.245 41.667 0.00 0.00 34.79 3.60
3741 4082 5.763204 TGAGATTGTACCTTTCCTCACAAAC 59.237 40.000 0.00 0.00 34.79 2.93
3742 4083 5.935945 TGAGATTGTACCTTTCCTCACAAA 58.064 37.500 0.00 0.00 34.79 2.83
3743 4084 5.560722 TGAGATTGTACCTTTCCTCACAA 57.439 39.130 0.00 0.00 35.53 3.33
3744 4085 5.560722 TTGAGATTGTACCTTTCCTCACA 57.439 39.130 0.00 0.00 31.33 3.58
3745 4086 6.173339 TGATTGAGATTGTACCTTTCCTCAC 58.827 40.000 0.00 0.00 31.33 3.51
3746 4087 6.373005 TGATTGAGATTGTACCTTTCCTCA 57.627 37.500 0.00 0.00 0.00 3.86
3747 4088 8.424918 TCTATGATTGAGATTGTACCTTTCCTC 58.575 37.037 0.00 0.00 0.00 3.71
3748 4089 8.207545 GTCTATGATTGAGATTGTACCTTTCCT 58.792 37.037 0.00 0.00 0.00 3.36
3749 4090 8.207545 AGTCTATGATTGAGATTGTACCTTTCC 58.792 37.037 0.00 0.00 0.00 3.13
3750 4091 9.255304 GAGTCTATGATTGAGATTGTACCTTTC 57.745 37.037 0.00 0.00 0.00 2.62
3751 4092 8.207545 GGAGTCTATGATTGAGATTGTACCTTT 58.792 37.037 0.00 0.00 0.00 3.11
3752 4093 7.566879 AGGAGTCTATGATTGAGATTGTACCTT 59.433 37.037 0.00 0.00 0.00 3.50
3753 4094 7.072562 AGGAGTCTATGATTGAGATTGTACCT 58.927 38.462 0.00 0.00 0.00 3.08
3754 4095 7.014711 TGAGGAGTCTATGATTGAGATTGTACC 59.985 40.741 0.00 0.00 0.00 3.34
3755 4096 7.946207 TGAGGAGTCTATGATTGAGATTGTAC 58.054 38.462 0.00 0.00 0.00 2.90
3756 4097 8.539117 TTGAGGAGTCTATGATTGAGATTGTA 57.461 34.615 0.00 0.00 0.00 2.41
3757 4098 7.429374 TTGAGGAGTCTATGATTGAGATTGT 57.571 36.000 0.00 0.00 0.00 2.71
3758 4099 7.226325 GGTTTGAGGAGTCTATGATTGAGATTG 59.774 40.741 0.00 0.00 0.00 2.67
3759 4100 7.092712 TGGTTTGAGGAGTCTATGATTGAGATT 60.093 37.037 0.00 0.00 0.00 2.40
3760 4101 6.385176 TGGTTTGAGGAGTCTATGATTGAGAT 59.615 38.462 0.00 0.00 0.00 2.75
3761 4102 5.721480 TGGTTTGAGGAGTCTATGATTGAGA 59.279 40.000 0.00 0.00 0.00 3.27
3762 4103 5.982356 TGGTTTGAGGAGTCTATGATTGAG 58.018 41.667 0.00 0.00 0.00 3.02
3763 4104 6.373005 TTGGTTTGAGGAGTCTATGATTGA 57.627 37.500 0.00 0.00 0.00 2.57
3764 4105 6.825213 TGATTGGTTTGAGGAGTCTATGATTG 59.175 38.462 0.00 0.00 0.00 2.67
3765 4106 6.962182 TGATTGGTTTGAGGAGTCTATGATT 58.038 36.000 0.00 0.00 0.00 2.57
3766 4107 6.566079 TGATTGGTTTGAGGAGTCTATGAT 57.434 37.500 0.00 0.00 0.00 2.45
3767 4108 6.173339 GTTGATTGGTTTGAGGAGTCTATGA 58.827 40.000 0.00 0.00 0.00 2.15
3768 4109 5.939883 TGTTGATTGGTTTGAGGAGTCTATG 59.060 40.000 0.00 0.00 0.00 2.23
3769 4110 6.126863 TGTTGATTGGTTTGAGGAGTCTAT 57.873 37.500 0.00 0.00 0.00 1.98
3770 4111 5.071788 ACTGTTGATTGGTTTGAGGAGTCTA 59.928 40.000 0.00 0.00 0.00 2.59
3771 4112 4.141390 ACTGTTGATTGGTTTGAGGAGTCT 60.141 41.667 0.00 0.00 0.00 3.24
3772 4113 4.137543 ACTGTTGATTGGTTTGAGGAGTC 58.862 43.478 0.00 0.00 0.00 3.36
3773 4114 4.170468 ACTGTTGATTGGTTTGAGGAGT 57.830 40.909 0.00 0.00 0.00 3.85
3774 4115 5.551233 TCTACTGTTGATTGGTTTGAGGAG 58.449 41.667 0.00 0.00 0.00 3.69
3775 4116 5.560722 TCTACTGTTGATTGGTTTGAGGA 57.439 39.130 0.00 0.00 0.00 3.71
3776 4117 5.997746 TCTTCTACTGTTGATTGGTTTGAGG 59.002 40.000 0.00 0.00 0.00 3.86
3777 4118 7.496529 TTCTTCTACTGTTGATTGGTTTGAG 57.503 36.000 0.00 0.00 0.00 3.02
3778 4119 7.873719 TTTCTTCTACTGTTGATTGGTTTGA 57.126 32.000 0.00 0.00 0.00 2.69
3779 4120 9.185192 GATTTTCTTCTACTGTTGATTGGTTTG 57.815 33.333 0.00 0.00 0.00 2.93
3780 4121 9.136323 AGATTTTCTTCTACTGTTGATTGGTTT 57.864 29.630 0.00 0.00 0.00 3.27
3781 4122 8.697507 AGATTTTCTTCTACTGTTGATTGGTT 57.302 30.769 0.00 0.00 0.00 3.67
3782 4123 9.442047 CTAGATTTTCTTCTACTGTTGATTGGT 57.558 33.333 0.00 0.00 0.00 3.67
3783 4124 8.394121 GCTAGATTTTCTTCTACTGTTGATTGG 58.606 37.037 0.00 0.00 0.00 3.16
3784 4125 8.394121 GGCTAGATTTTCTTCTACTGTTGATTG 58.606 37.037 0.00 0.00 0.00 2.67
3785 4126 8.103305 TGGCTAGATTTTCTTCTACTGTTGATT 58.897 33.333 0.00 0.00 0.00 2.57
3786 4127 7.624549 TGGCTAGATTTTCTTCTACTGTTGAT 58.375 34.615 0.00 0.00 0.00 2.57
3787 4128 7.004555 TGGCTAGATTTTCTTCTACTGTTGA 57.995 36.000 0.00 0.00 0.00 3.18
3788 4129 7.361286 GGTTGGCTAGATTTTCTTCTACTGTTG 60.361 40.741 0.00 0.00 0.00 3.33
3789 4130 6.655425 GGTTGGCTAGATTTTCTTCTACTGTT 59.345 38.462 0.00 0.00 0.00 3.16
3790 4131 6.013293 AGGTTGGCTAGATTTTCTTCTACTGT 60.013 38.462 0.00 0.00 0.00 3.55
3791 4132 6.410540 AGGTTGGCTAGATTTTCTTCTACTG 58.589 40.000 0.00 0.00 0.00 2.74
3792 4133 6.628644 AGGTTGGCTAGATTTTCTTCTACT 57.371 37.500 0.00 0.00 0.00 2.57
3793 4134 6.480651 GCTAGGTTGGCTAGATTTTCTTCTAC 59.519 42.308 0.00 0.00 0.00 2.59
3794 4135 6.156256 TGCTAGGTTGGCTAGATTTTCTTCTA 59.844 38.462 0.00 0.00 0.00 2.10
3795 4136 5.045578 TGCTAGGTTGGCTAGATTTTCTTCT 60.046 40.000 0.00 0.00 0.00 2.85
3796 4137 5.186198 TGCTAGGTTGGCTAGATTTTCTTC 58.814 41.667 0.00 0.00 0.00 2.87
3797 4138 5.179452 TGCTAGGTTGGCTAGATTTTCTT 57.821 39.130 0.00 0.00 0.00 2.52
3798 4139 4.844349 TGCTAGGTTGGCTAGATTTTCT 57.156 40.909 0.00 0.00 0.00 2.52
3799 4140 4.201960 GCTTGCTAGGTTGGCTAGATTTTC 60.202 45.833 0.00 0.00 35.27 2.29
3800 4141 3.696548 GCTTGCTAGGTTGGCTAGATTTT 59.303 43.478 0.00 0.00 35.27 1.82
3801 4142 3.054065 AGCTTGCTAGGTTGGCTAGATTT 60.054 43.478 0.00 0.00 35.27 2.17
3802 4143 2.507471 AGCTTGCTAGGTTGGCTAGATT 59.493 45.455 0.00 0.00 35.27 2.40
3803 4144 2.103941 GAGCTTGCTAGGTTGGCTAGAT 59.896 50.000 0.48 0.00 35.27 1.98
3804 4145 1.482593 GAGCTTGCTAGGTTGGCTAGA 59.517 52.381 0.48 0.00 35.27 2.43
3805 4146 1.804372 CGAGCTTGCTAGGTTGGCTAG 60.804 57.143 6.70 0.00 36.09 3.42
3806 4147 0.175760 CGAGCTTGCTAGGTTGGCTA 59.824 55.000 6.70 0.00 33.13 3.93
3807 4148 1.078848 CGAGCTTGCTAGGTTGGCT 60.079 57.895 6.70 0.00 35.86 4.75
3808 4149 1.376037 ACGAGCTTGCTAGGTTGGC 60.376 57.895 17.14 0.00 37.55 4.52
3809 4150 1.639298 GCACGAGCTTGCTAGGTTGG 61.639 60.000 17.14 8.28 39.59 3.77
3810 4151 1.790387 GCACGAGCTTGCTAGGTTG 59.210 57.895 12.29 12.29 39.59 3.77
3811 4152 1.738099 CGCACGAGCTTGCTAGGTT 60.738 57.895 8.67 0.00 40.62 3.50
3812 4153 2.125912 CGCACGAGCTTGCTAGGT 60.126 61.111 8.67 0.00 40.62 3.08
3813 4154 3.558411 GCGCACGAGCTTGCTAGG 61.558 66.667 0.30 0.43 40.62 3.02
3814 4155 2.382746 TTGCGCACGAGCTTGCTAG 61.383 57.895 11.12 0.00 40.62 3.42
3815 4156 2.356913 TTGCGCACGAGCTTGCTA 60.357 55.556 11.12 0.00 40.62 3.49
3816 4157 4.017877 GTTGCGCACGAGCTTGCT 62.018 61.111 11.12 0.00 40.62 3.91
3818 4159 1.565156 TAAGGTTGCGCACGAGCTTG 61.565 55.000 27.98 0.00 45.53 4.01
3819 4160 2.591715 AAGGTTGCGCACGAGCTT 60.592 55.556 18.24 18.24 42.07 3.74
3820 4161 1.079127 ATAAGGTTGCGCACGAGCT 60.079 52.632 11.12 9.20 39.81 4.09
3821 4162 3.486263 ATAAGGTTGCGCACGAGC 58.514 55.556 11.12 6.33 37.71 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.