Multiple sequence alignment - TraesCS6B01G239700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G239700 chr6B 100.000 3152 0 0 1 3152 417216909 417220060 0.000000e+00 5821
1 TraesCS6B01G239700 chr6B 82.036 167 21 6 496 660 492666719 492666878 1.970000e-27 134
2 TraesCS6B01G239700 chr6B 86.555 119 16 0 1 119 232075417 232075299 7.090000e-27 132
3 TraesCS6B01G239700 chr6B 85.833 120 17 0 1 120 79246319 79246438 9.180000e-26 128
4 TraesCS6B01G239700 chr3A 98.458 2335 35 1 818 3152 311916024 311918357 0.000000e+00 4111
5 TraesCS6B01G239700 chr1A 98.415 2335 37 0 818 3152 12229966 12227632 0.000000e+00 4108
6 TraesCS6B01G239700 chr2D 89.554 2221 219 9 940 3152 575941707 575939492 0.000000e+00 2804
7 TraesCS6B01G239700 chr2D 91.139 158 9 5 818 972 575941868 575941713 3.190000e-50 209
8 TraesCS6B01G239700 chr3D 87.572 2076 237 15 820 2881 561385505 561383437 0.000000e+00 2385
9 TraesCS6B01G239700 chr3D 87.349 166 21 0 2987 3152 561383071 561382906 1.150000e-44 191
10 TraesCS6B01G239700 chr5B 91.460 1616 125 7 816 2426 607865100 607863493 0.000000e+00 2207
11 TraesCS6B01G239700 chr5B 85.385 1300 183 7 1855 3152 704737004 704735710 0.000000e+00 1341
12 TraesCS6B01G239700 chr5B 92.867 729 52 0 2424 3152 607853502 607852774 0.000000e+00 1059
13 TraesCS6B01G239700 chr5B 86.207 957 108 13 919 1862 704746690 704745745 0.000000e+00 1014
14 TraesCS6B01G239700 chr5B 82.581 155 26 1 483 636 434990032 434989878 5.480000e-28 135
15 TraesCS6B01G239700 chr4A 85.377 1990 266 8 916 2888 610765717 610767698 0.000000e+00 2039
16 TraesCS6B01G239700 chr2B 82.589 2240 350 25 927 3152 229442915 229440702 0.000000e+00 1940
17 TraesCS6B01G239700 chr2B 87.363 182 22 1 480 660 137461818 137461999 1.150000e-49 207
18 TraesCS6B01G239700 chr2B 88.060 134 13 2 1 133 748363772 748363641 4.210000e-34 156
19 TraesCS6B01G239700 chr7D 81.774 2244 392 14 916 3152 249490448 249492681 0.000000e+00 1862
20 TraesCS6B01G239700 chr1D 80.974 2239 397 26 927 3152 388635319 388633097 0.000000e+00 1748
21 TraesCS6B01G239700 chr1D 93.310 852 56 1 2302 3152 365221723 365222574 0.000000e+00 1256
22 TraesCS6B01G239700 chr3B 80.687 1688 302 22 936 2612 610207585 610205911 0.000000e+00 1290
23 TraesCS6B01G239700 chr6A 91.940 335 24 2 252 585 383349597 383349929 1.710000e-127 466
24 TraesCS6B01G239700 chr6A 91.803 183 10 4 642 819 383471473 383471655 1.880000e-62 250
25 TraesCS6B01G239700 chr6D 88.856 341 25 6 480 818 269113926 269114255 1.050000e-109 407
26 TraesCS6B01G239700 chr6D 92.609 230 14 3 256 482 269113661 269113890 8.430000e-86 327
27 TraesCS6B01G239700 chr7B 82.292 192 27 6 486 673 530461861 530461673 3.250000e-35 159
28 TraesCS6B01G239700 chr5D 84.516 155 23 1 483 636 367653967 367653813 5.450000e-33 152
29 TraesCS6B01G239700 chr1B 83.193 119 20 0 542 660 59621807 59621925 3.320000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G239700 chr6B 417216909 417220060 3151 False 5821.0 5821 100.0000 1 3152 1 chr6B.!!$F2 3151
1 TraesCS6B01G239700 chr3A 311916024 311918357 2333 False 4111.0 4111 98.4580 818 3152 1 chr3A.!!$F1 2334
2 TraesCS6B01G239700 chr1A 12227632 12229966 2334 True 4108.0 4108 98.4150 818 3152 1 chr1A.!!$R1 2334
3 TraesCS6B01G239700 chr2D 575939492 575941868 2376 True 1506.5 2804 90.3465 818 3152 2 chr2D.!!$R1 2334
4 TraesCS6B01G239700 chr3D 561382906 561385505 2599 True 1288.0 2385 87.4605 820 3152 2 chr3D.!!$R1 2332
5 TraesCS6B01G239700 chr5B 607863493 607865100 1607 True 2207.0 2207 91.4600 816 2426 1 chr5B.!!$R3 1610
6 TraesCS6B01G239700 chr5B 704735710 704737004 1294 True 1341.0 1341 85.3850 1855 3152 1 chr5B.!!$R4 1297
7 TraesCS6B01G239700 chr5B 607852774 607853502 728 True 1059.0 1059 92.8670 2424 3152 1 chr5B.!!$R2 728
8 TraesCS6B01G239700 chr5B 704745745 704746690 945 True 1014.0 1014 86.2070 919 1862 1 chr5B.!!$R5 943
9 TraesCS6B01G239700 chr4A 610765717 610767698 1981 False 2039.0 2039 85.3770 916 2888 1 chr4A.!!$F1 1972
10 TraesCS6B01G239700 chr2B 229440702 229442915 2213 True 1940.0 1940 82.5890 927 3152 1 chr2B.!!$R1 2225
11 TraesCS6B01G239700 chr7D 249490448 249492681 2233 False 1862.0 1862 81.7740 916 3152 1 chr7D.!!$F1 2236
12 TraesCS6B01G239700 chr1D 388633097 388635319 2222 True 1748.0 1748 80.9740 927 3152 1 chr1D.!!$R1 2225
13 TraesCS6B01G239700 chr1D 365221723 365222574 851 False 1256.0 1256 93.3100 2302 3152 1 chr1D.!!$F1 850
14 TraesCS6B01G239700 chr3B 610205911 610207585 1674 True 1290.0 1290 80.6870 936 2612 1 chr3B.!!$R1 1676
15 TraesCS6B01G239700 chr6D 269113661 269114255 594 False 367.0 407 90.7325 256 818 2 chr6D.!!$F1 562

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
44 45 0.032952 AAAGTTACGCTCACGCAGGA 59.967 50.000 0.0 0.00 45.53 3.86 F
673 675 0.040067 AGGTTCGTCGTACACGGAAC 60.040 55.000 14.8 12.55 45.19 3.62 F
914 921 0.401738 CCCTCCTTGCTGGTTCTTCA 59.598 55.000 0.0 0.00 37.07 3.02 F
1125 1177 1.971695 GGAACAAGAAGCACCCCCG 60.972 63.158 0.0 0.00 0.00 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1125 1177 1.006805 CCATCTGATCGACTCCGGC 60.007 63.158 0.00 0.0 36.24 6.13 R
1789 1880 1.363744 CTTGATGCTCCTCGTCCAAC 58.636 55.000 0.00 0.0 0.00 3.77 R
2118 2222 2.865600 AGGCCACTCTGGGTCTCT 59.134 61.111 5.01 0.0 39.03 3.10 R
2967 3123 3.102204 CCAGCTTCCCCTTGATTTCATT 58.898 45.455 0.00 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.543749 AGCTACCAGAACCATCAGGC 59.456 55.000 0.00 0.00 35.71 4.85
20 21 0.543749 GCTACCAGAACCATCAGGCT 59.456 55.000 0.00 0.00 35.71 4.58
21 22 1.762957 GCTACCAGAACCATCAGGCTA 59.237 52.381 0.00 0.00 35.71 3.93
22 23 2.170607 GCTACCAGAACCATCAGGCTAA 59.829 50.000 0.00 0.00 35.71 3.09
23 24 2.789409 ACCAGAACCATCAGGCTAAC 57.211 50.000 0.00 0.00 35.71 2.34
24 25 1.282157 ACCAGAACCATCAGGCTAACC 59.718 52.381 0.00 0.00 35.71 2.85
25 26 1.281867 CCAGAACCATCAGGCTAACCA 59.718 52.381 0.00 0.00 39.06 3.67
26 27 2.290896 CCAGAACCATCAGGCTAACCAA 60.291 50.000 0.00 0.00 39.06 3.67
27 28 3.420893 CAGAACCATCAGGCTAACCAAA 58.579 45.455 0.00 0.00 39.06 3.28
28 29 3.441572 CAGAACCATCAGGCTAACCAAAG 59.558 47.826 0.00 0.00 39.06 2.77
29 30 3.074538 AGAACCATCAGGCTAACCAAAGT 59.925 43.478 0.00 0.00 39.06 2.66
30 31 3.525800 ACCATCAGGCTAACCAAAGTT 57.474 42.857 0.00 0.00 39.06 2.66
31 32 4.650972 ACCATCAGGCTAACCAAAGTTA 57.349 40.909 0.00 0.00 39.06 2.24
32 33 4.332828 ACCATCAGGCTAACCAAAGTTAC 58.667 43.478 0.00 0.00 39.06 2.50
33 34 3.374058 CCATCAGGCTAACCAAAGTTACG 59.626 47.826 0.00 0.00 39.06 3.18
34 35 2.419667 TCAGGCTAACCAAAGTTACGC 58.580 47.619 0.00 0.00 39.06 4.42
35 36 2.038033 TCAGGCTAACCAAAGTTACGCT 59.962 45.455 0.00 0.00 39.06 5.07
36 37 2.415512 CAGGCTAACCAAAGTTACGCTC 59.584 50.000 0.00 0.00 39.06 5.03
37 38 2.038033 AGGCTAACCAAAGTTACGCTCA 59.962 45.455 0.00 0.00 39.06 4.26
38 39 2.159037 GGCTAACCAAAGTTACGCTCAC 59.841 50.000 0.00 0.00 37.42 3.51
39 40 2.159881 GCTAACCAAAGTTACGCTCACG 60.160 50.000 0.00 0.00 40.48 4.35
40 41 0.584876 AACCAAAGTTACGCTCACGC 59.415 50.000 0.00 0.00 45.53 5.34
41 42 0.531090 ACCAAAGTTACGCTCACGCA 60.531 50.000 0.00 0.00 45.53 5.24
42 43 0.163788 CCAAAGTTACGCTCACGCAG 59.836 55.000 0.00 0.00 45.53 5.18
43 44 0.163788 CAAAGTTACGCTCACGCAGG 59.836 55.000 0.00 0.00 45.53 4.85
44 45 0.032952 AAAGTTACGCTCACGCAGGA 59.967 50.000 0.00 0.00 45.53 3.86
45 46 0.388649 AAGTTACGCTCACGCAGGAG 60.389 55.000 0.00 0.00 45.53 3.69
52 53 3.768633 CTCACGCAGGAGCCTAAAT 57.231 52.632 0.00 0.00 37.52 1.40
53 54 1.576356 CTCACGCAGGAGCCTAAATC 58.424 55.000 0.00 0.00 37.52 2.17
54 55 0.178068 TCACGCAGGAGCCTAAATCC 59.822 55.000 0.00 0.00 37.52 3.01
55 56 0.107703 CACGCAGGAGCCTAAATCCA 60.108 55.000 0.00 0.00 39.47 3.41
56 57 0.107654 ACGCAGGAGCCTAAATCCAC 60.108 55.000 0.00 0.00 39.47 4.02
57 58 0.179000 CGCAGGAGCCTAAATCCACT 59.821 55.000 0.00 0.00 39.47 4.00
58 59 1.808133 CGCAGGAGCCTAAATCCACTC 60.808 57.143 0.00 0.00 39.47 3.51
59 60 1.210478 GCAGGAGCCTAAATCCACTCA 59.790 52.381 0.00 0.00 39.47 3.41
60 61 2.911484 CAGGAGCCTAAATCCACTCAC 58.089 52.381 0.00 0.00 39.47 3.51
61 62 2.237143 CAGGAGCCTAAATCCACTCACA 59.763 50.000 0.00 0.00 39.47 3.58
62 63 2.237392 AGGAGCCTAAATCCACTCACAC 59.763 50.000 0.00 0.00 39.47 3.82
63 64 2.633488 GAGCCTAAATCCACTCACACC 58.367 52.381 0.00 0.00 0.00 4.16
64 65 1.985159 AGCCTAAATCCACTCACACCA 59.015 47.619 0.00 0.00 0.00 4.17
65 66 2.084546 GCCTAAATCCACTCACACCAC 58.915 52.381 0.00 0.00 0.00 4.16
66 67 2.711542 CCTAAATCCACTCACACCACC 58.288 52.381 0.00 0.00 0.00 4.61
67 68 2.039746 CCTAAATCCACTCACACCACCA 59.960 50.000 0.00 0.00 0.00 4.17
68 69 2.746279 AAATCCACTCACACCACCAA 57.254 45.000 0.00 0.00 0.00 3.67
69 70 2.276732 AATCCACTCACACCACCAAG 57.723 50.000 0.00 0.00 0.00 3.61
70 71 0.250901 ATCCACTCACACCACCAAGC 60.251 55.000 0.00 0.00 0.00 4.01
71 72 1.149174 CCACTCACACCACCAAGCT 59.851 57.895 0.00 0.00 0.00 3.74
72 73 0.396435 CCACTCACACCACCAAGCTA 59.604 55.000 0.00 0.00 0.00 3.32
73 74 1.512926 CACTCACACCACCAAGCTAC 58.487 55.000 0.00 0.00 0.00 3.58
74 75 1.128200 ACTCACACCACCAAGCTACA 58.872 50.000 0.00 0.00 0.00 2.74
75 76 1.070758 ACTCACACCACCAAGCTACAG 59.929 52.381 0.00 0.00 0.00 2.74
76 77 1.344438 CTCACACCACCAAGCTACAGA 59.656 52.381 0.00 0.00 0.00 3.41
77 78 1.977854 TCACACCACCAAGCTACAGAT 59.022 47.619 0.00 0.00 0.00 2.90
78 79 3.169908 TCACACCACCAAGCTACAGATA 58.830 45.455 0.00 0.00 0.00 1.98
79 80 3.056107 TCACACCACCAAGCTACAGATAC 60.056 47.826 0.00 0.00 0.00 2.24
80 81 2.236395 ACACCACCAAGCTACAGATACC 59.764 50.000 0.00 0.00 0.00 2.73
81 82 2.236146 CACCACCAAGCTACAGATACCA 59.764 50.000 0.00 0.00 0.00 3.25
82 83 2.910319 ACCACCAAGCTACAGATACCAA 59.090 45.455 0.00 0.00 0.00 3.67
83 84 3.329520 ACCACCAAGCTACAGATACCAAA 59.670 43.478 0.00 0.00 0.00 3.28
84 85 4.202524 ACCACCAAGCTACAGATACCAAAA 60.203 41.667 0.00 0.00 0.00 2.44
85 86 4.396166 CCACCAAGCTACAGATACCAAAAG 59.604 45.833 0.00 0.00 0.00 2.27
86 87 4.396166 CACCAAGCTACAGATACCAAAAGG 59.604 45.833 0.00 0.00 0.00 3.11
87 88 4.042934 ACCAAGCTACAGATACCAAAAGGT 59.957 41.667 0.00 0.00 0.00 3.50
88 89 4.636206 CCAAGCTACAGATACCAAAAGGTC 59.364 45.833 0.00 0.00 0.00 3.85
89 90 5.491982 CAAGCTACAGATACCAAAAGGTCT 58.508 41.667 0.00 0.00 0.00 3.85
90 91 6.351881 CCAAGCTACAGATACCAAAAGGTCTA 60.352 42.308 0.00 0.00 0.00 2.59
91 92 6.472686 AGCTACAGATACCAAAAGGTCTAG 57.527 41.667 0.00 0.00 0.00 2.43
92 93 5.364157 AGCTACAGATACCAAAAGGTCTAGG 59.636 44.000 0.00 0.00 0.00 3.02
93 94 5.363005 GCTACAGATACCAAAAGGTCTAGGA 59.637 44.000 0.00 0.00 0.00 2.94
94 95 6.127140 GCTACAGATACCAAAAGGTCTAGGAA 60.127 42.308 0.00 0.00 0.00 3.36
95 96 6.051179 ACAGATACCAAAAGGTCTAGGAAC 57.949 41.667 0.00 0.00 0.00 3.62
96 97 5.546499 ACAGATACCAAAAGGTCTAGGAACA 59.454 40.000 0.00 0.00 0.00 3.18
97 98 6.043938 ACAGATACCAAAAGGTCTAGGAACAA 59.956 38.462 0.00 0.00 0.00 2.83
98 99 7.112779 CAGATACCAAAAGGTCTAGGAACAAT 58.887 38.462 0.00 0.00 0.00 2.71
99 100 7.066284 CAGATACCAAAAGGTCTAGGAACAATG 59.934 40.741 0.00 0.00 0.00 2.82
100 101 4.407365 ACCAAAAGGTCTAGGAACAATGG 58.593 43.478 0.00 0.00 0.00 3.16
101 102 4.105697 ACCAAAAGGTCTAGGAACAATGGA 59.894 41.667 8.74 0.00 0.00 3.41
102 103 5.076873 CCAAAAGGTCTAGGAACAATGGAA 58.923 41.667 0.00 0.00 0.00 3.53
103 104 5.538433 CCAAAAGGTCTAGGAACAATGGAAA 59.462 40.000 0.00 0.00 0.00 3.13
104 105 6.294731 CCAAAAGGTCTAGGAACAATGGAAAG 60.295 42.308 0.00 0.00 0.00 2.62
105 106 3.956744 AGGTCTAGGAACAATGGAAAGC 58.043 45.455 0.00 0.00 0.00 3.51
106 107 3.330701 AGGTCTAGGAACAATGGAAAGCA 59.669 43.478 0.00 0.00 0.00 3.91
107 108 4.018050 AGGTCTAGGAACAATGGAAAGCAT 60.018 41.667 0.00 0.00 0.00 3.79
108 109 4.096984 GGTCTAGGAACAATGGAAAGCATG 59.903 45.833 0.00 0.00 0.00 4.06
109 110 4.702131 GTCTAGGAACAATGGAAAGCATGT 59.298 41.667 0.00 0.00 0.00 3.21
110 111 4.943705 TCTAGGAACAATGGAAAGCATGTC 59.056 41.667 0.00 0.00 0.00 3.06
111 112 2.827921 AGGAACAATGGAAAGCATGTCC 59.172 45.455 0.00 0.00 45.37 4.02
112 113 2.094026 GGAACAATGGAAAGCATGTCCC 60.094 50.000 0.00 0.00 44.11 4.46
113 114 2.307496 ACAATGGAAAGCATGTCCCA 57.693 45.000 0.00 0.00 44.11 4.37
114 115 2.173519 ACAATGGAAAGCATGTCCCAG 58.826 47.619 0.00 0.00 44.11 4.45
115 116 1.479323 CAATGGAAAGCATGTCCCAGG 59.521 52.381 0.00 0.00 44.11 4.45
116 117 0.685458 ATGGAAAGCATGTCCCAGGC 60.685 55.000 0.00 0.00 44.11 4.85
117 118 2.409870 GGAAAGCATGTCCCAGGCG 61.410 63.158 0.00 0.00 46.20 5.52
118 119 1.377202 GAAAGCATGTCCCAGGCGA 60.377 57.895 0.00 0.00 46.20 5.54
119 120 0.960364 GAAAGCATGTCCCAGGCGAA 60.960 55.000 0.00 0.00 46.20 4.70
120 121 1.244019 AAAGCATGTCCCAGGCGAAC 61.244 55.000 0.00 0.00 46.20 3.95
121 122 2.359850 GCATGTCCCAGGCGAACA 60.360 61.111 0.00 0.00 30.03 3.18
122 123 2.401766 GCATGTCCCAGGCGAACAG 61.402 63.158 0.00 0.00 30.03 3.16
123 124 1.746615 CATGTCCCAGGCGAACAGG 60.747 63.158 0.00 0.00 0.00 4.00
141 142 2.191128 GGCAACTGAGATTGACCTGT 57.809 50.000 0.00 0.00 30.69 4.00
142 143 2.508526 GGCAACTGAGATTGACCTGTT 58.491 47.619 0.00 0.00 30.69 3.16
143 144 2.887152 GGCAACTGAGATTGACCTGTTT 59.113 45.455 0.00 0.00 30.69 2.83
144 145 3.319122 GGCAACTGAGATTGACCTGTTTT 59.681 43.478 0.00 0.00 30.69 2.43
145 146 4.202151 GGCAACTGAGATTGACCTGTTTTT 60.202 41.667 0.00 0.00 30.69 1.94
168 169 8.611654 TTTTTGTCCTAGTTACAAGTACATCC 57.388 34.615 7.66 0.00 38.05 3.51
169 170 7.549147 TTTGTCCTAGTTACAAGTACATCCT 57.451 36.000 7.66 0.00 38.05 3.24
170 171 6.770746 TGTCCTAGTTACAAGTACATCCTC 57.229 41.667 0.00 0.00 0.00 3.71
171 172 5.356190 TGTCCTAGTTACAAGTACATCCTCG 59.644 44.000 0.00 0.00 0.00 4.63
172 173 5.587844 GTCCTAGTTACAAGTACATCCTCGA 59.412 44.000 0.00 0.00 0.00 4.04
173 174 5.821470 TCCTAGTTACAAGTACATCCTCGAG 59.179 44.000 5.13 5.13 0.00 4.04
174 175 5.821470 CCTAGTTACAAGTACATCCTCGAGA 59.179 44.000 15.71 0.00 0.00 4.04
175 176 5.564048 AGTTACAAGTACATCCTCGAGAC 57.436 43.478 15.71 3.22 0.00 3.36
176 177 4.094590 AGTTACAAGTACATCCTCGAGACG 59.905 45.833 15.71 3.97 0.00 4.18
177 178 1.132643 ACAAGTACATCCTCGAGACGC 59.867 52.381 15.71 0.00 0.00 5.19
178 179 1.132453 CAAGTACATCCTCGAGACGCA 59.868 52.381 15.71 0.00 0.00 5.24
179 180 1.460504 AGTACATCCTCGAGACGCAA 58.539 50.000 15.71 0.00 0.00 4.85
180 181 1.816835 AGTACATCCTCGAGACGCAAA 59.183 47.619 15.71 0.00 0.00 3.68
181 182 1.918609 GTACATCCTCGAGACGCAAAC 59.081 52.381 15.71 1.02 0.00 2.93
182 183 0.603569 ACATCCTCGAGACGCAAACT 59.396 50.000 15.71 0.00 0.00 2.66
183 184 0.994995 CATCCTCGAGACGCAAACTG 59.005 55.000 15.71 0.00 0.00 3.16
184 185 0.108615 ATCCTCGAGACGCAAACTGG 60.109 55.000 15.71 0.00 0.00 4.00
185 186 1.006102 CCTCGAGACGCAAACTGGT 60.006 57.895 15.71 0.00 0.00 4.00
186 187 0.600255 CCTCGAGACGCAAACTGGTT 60.600 55.000 15.71 0.00 0.00 3.67
187 188 1.217882 CTCGAGACGCAAACTGGTTT 58.782 50.000 6.58 0.00 0.00 3.27
188 189 1.597663 CTCGAGACGCAAACTGGTTTT 59.402 47.619 6.58 0.00 0.00 2.43
189 190 2.011222 TCGAGACGCAAACTGGTTTTT 58.989 42.857 0.00 0.00 0.00 1.94
190 191 2.108700 CGAGACGCAAACTGGTTTTTG 58.891 47.619 0.00 0.00 39.15 2.44
191 192 2.459934 GAGACGCAAACTGGTTTTTGG 58.540 47.619 0.00 0.00 37.02 3.28
193 194 2.984871 CGCAAACTGGTTTTTGGGG 58.015 52.632 5.08 0.00 42.67 4.96
194 195 0.531753 CGCAAACTGGTTTTTGGGGG 60.532 55.000 5.08 0.00 42.67 5.40
217 218 4.846551 GGGGGTTGTGTTTTGTGC 57.153 55.556 0.00 0.00 0.00 4.57
218 219 2.207580 GGGGGTTGTGTTTTGTGCT 58.792 52.632 0.00 0.00 0.00 4.40
219 220 0.179086 GGGGGTTGTGTTTTGTGCTG 60.179 55.000 0.00 0.00 0.00 4.41
220 221 0.820871 GGGGTTGTGTTTTGTGCTGA 59.179 50.000 0.00 0.00 0.00 4.26
221 222 1.412343 GGGGTTGTGTTTTGTGCTGAT 59.588 47.619 0.00 0.00 0.00 2.90
222 223 2.625790 GGGGTTGTGTTTTGTGCTGATA 59.374 45.455 0.00 0.00 0.00 2.15
223 224 3.068873 GGGGTTGTGTTTTGTGCTGATAA 59.931 43.478 0.00 0.00 0.00 1.75
224 225 4.442192 GGGGTTGTGTTTTGTGCTGATAAA 60.442 41.667 0.00 0.00 0.00 1.40
225 226 5.296748 GGGTTGTGTTTTGTGCTGATAAAT 58.703 37.500 0.00 0.00 0.00 1.40
226 227 6.451393 GGGTTGTGTTTTGTGCTGATAAATA 58.549 36.000 0.00 0.00 0.00 1.40
227 228 7.096551 GGGTTGTGTTTTGTGCTGATAAATAT 58.903 34.615 0.00 0.00 0.00 1.28
228 229 7.275560 GGGTTGTGTTTTGTGCTGATAAATATC 59.724 37.037 0.00 0.00 0.00 1.63
229 230 7.812191 GGTTGTGTTTTGTGCTGATAAATATCA 59.188 33.333 3.29 3.29 40.19 2.15
230 231 9.190858 GTTGTGTTTTGTGCTGATAAATATCAA 57.809 29.630 4.78 0.00 41.72 2.57
231 232 9.755804 TTGTGTTTTGTGCTGATAAATATCAAA 57.244 25.926 4.78 0.00 41.72 2.69
232 233 9.190858 TGTGTTTTGTGCTGATAAATATCAAAC 57.809 29.630 4.78 6.73 41.72 2.93
233 234 8.647226 GTGTTTTGTGCTGATAAATATCAAACC 58.353 33.333 4.78 0.00 41.72 3.27
234 235 8.363390 TGTTTTGTGCTGATAAATATCAAACCA 58.637 29.630 4.78 0.86 41.72 3.67
235 236 9.369904 GTTTTGTGCTGATAAATATCAAACCAT 57.630 29.630 4.78 0.00 41.72 3.55
236 237 8.929827 TTTGTGCTGATAAATATCAAACCATG 57.070 30.769 4.78 0.00 41.72 3.66
237 238 7.643569 TGTGCTGATAAATATCAAACCATGT 57.356 32.000 4.78 0.00 41.72 3.21
238 239 8.065473 TGTGCTGATAAATATCAAACCATGTT 57.935 30.769 4.78 0.00 41.72 2.71
239 240 9.183368 TGTGCTGATAAATATCAAACCATGTTA 57.817 29.630 4.78 0.00 41.72 2.41
251 252 7.908827 TCAAACCATGTTATGTTATACGTGT 57.091 32.000 0.00 0.00 30.98 4.49
252 253 7.744059 TCAAACCATGTTATGTTATACGTGTG 58.256 34.615 0.00 0.00 30.98 3.82
253 254 7.388224 TCAAACCATGTTATGTTATACGTGTGT 59.612 33.333 0.00 0.00 30.98 3.72
254 255 8.657729 CAAACCATGTTATGTTATACGTGTGTA 58.342 33.333 0.00 0.00 34.45 2.90
283 284 7.362662 TCATCATTAGTTTGCAACTTGTTCTC 58.637 34.615 0.00 0.00 42.81 2.87
284 285 6.691754 TCATTAGTTTGCAACTTGTTCTCA 57.308 33.333 0.00 0.00 42.81 3.27
285 286 6.728200 TCATTAGTTTGCAACTTGTTCTCAG 58.272 36.000 0.00 0.00 42.81 3.35
291 292 1.151668 CAACTTGTTCTCAGCCCTCG 58.848 55.000 0.00 0.00 0.00 4.63
294 295 1.272769 ACTTGTTCTCAGCCCTCGTAC 59.727 52.381 0.00 0.00 0.00 3.67
305 306 1.663388 CCTCGTACGCAGTTGCACA 60.663 57.895 11.24 0.00 37.78 4.57
356 358 5.414454 CCTAGTTGCAAGCCTATTTTGTACA 59.586 40.000 0.00 0.00 0.00 2.90
358 360 4.582656 AGTTGCAAGCCTATTTTGTACACA 59.417 37.500 0.00 0.00 0.00 3.72
359 361 4.497473 TGCAAGCCTATTTTGTACACAC 57.503 40.909 0.00 0.00 0.00 3.82
360 362 3.885901 TGCAAGCCTATTTTGTACACACA 59.114 39.130 0.00 0.00 0.00 3.72
361 363 4.522405 TGCAAGCCTATTTTGTACACACAT 59.478 37.500 0.00 0.00 33.76 3.21
362 364 4.858692 GCAAGCCTATTTTGTACACACATG 59.141 41.667 0.00 0.00 33.76 3.21
363 365 5.564651 GCAAGCCTATTTTGTACACACATGT 60.565 40.000 0.00 0.00 43.30 3.21
364 366 6.446318 CAAGCCTATTTTGTACACACATGTT 58.554 36.000 0.00 0.00 40.48 2.71
365 367 6.254281 AGCCTATTTTGTACACACATGTTC 57.746 37.500 0.00 0.00 40.48 3.18
366 368 5.086058 GCCTATTTTGTACACACATGTTCG 58.914 41.667 0.00 0.00 40.48 3.95
367 369 5.106869 GCCTATTTTGTACACACATGTTCGA 60.107 40.000 0.00 0.00 40.48 3.71
368 370 6.304126 CCTATTTTGTACACACATGTTCGAC 58.696 40.000 0.00 0.00 40.48 4.20
369 371 5.743026 ATTTTGTACACACATGTTCGACA 57.257 34.783 0.00 0.00 40.48 4.35
370 372 5.743026 TTTTGTACACACATGTTCGACAT 57.257 34.783 0.00 0.00 39.91 3.06
381 383 2.803451 TGTTCGACATGTGTTTTTGGC 58.197 42.857 1.15 0.00 0.00 4.52
382 384 2.124122 GTTCGACATGTGTTTTTGGCC 58.876 47.619 1.15 0.00 0.00 5.36
383 385 1.393603 TCGACATGTGTTTTTGGCCA 58.606 45.000 1.15 0.00 0.00 5.36
384 386 1.751351 TCGACATGTGTTTTTGGCCAA 59.249 42.857 16.05 16.05 0.00 4.52
385 387 2.166459 TCGACATGTGTTTTTGGCCAAA 59.834 40.909 27.13 27.13 0.00 3.28
386 388 2.283884 CGACATGTGTTTTTGGCCAAAC 59.716 45.455 30.43 20.96 37.20 2.93
387 389 3.265791 GACATGTGTTTTTGGCCAAACA 58.734 40.909 30.43 24.76 43.00 2.83
388 390 3.679389 ACATGTGTTTTTGGCCAAACAA 58.321 36.364 30.43 22.30 45.88 2.83
389 391 3.688673 ACATGTGTTTTTGGCCAAACAAG 59.311 39.130 30.43 22.89 45.88 3.16
390 392 3.685139 TGTGTTTTTGGCCAAACAAGA 57.315 38.095 30.43 20.83 45.88 3.02
391 393 4.008074 TGTGTTTTTGGCCAAACAAGAA 57.992 36.364 30.43 18.75 45.88 2.52
392 394 4.389374 TGTGTTTTTGGCCAAACAAGAAA 58.611 34.783 30.43 18.37 45.88 2.52
393 395 4.453819 TGTGTTTTTGGCCAAACAAGAAAG 59.546 37.500 30.43 0.00 45.88 2.62
394 396 4.006319 TGTTTTTGGCCAAACAAGAAAGG 58.994 39.130 30.43 0.00 42.42 3.11
395 397 3.990959 TTTTGGCCAAACAAGAAAGGT 57.009 38.095 30.43 0.00 0.00 3.50
396 398 3.990959 TTTGGCCAAACAAGAAAGGTT 57.009 38.095 27.13 0.00 0.00 3.50
397 399 5.422214 TTTTGGCCAAACAAGAAAGGTTA 57.578 34.783 30.43 8.57 0.00 2.85
398 400 5.422214 TTTGGCCAAACAAGAAAGGTTAA 57.578 34.783 27.13 0.00 0.00 2.01
399 401 5.422214 TTGGCCAAACAAGAAAGGTTAAA 57.578 34.783 17.98 0.00 0.00 1.52
400 402 5.622346 TGGCCAAACAAGAAAGGTTAAAT 57.378 34.783 0.61 0.00 0.00 1.40
401 403 6.732896 TGGCCAAACAAGAAAGGTTAAATA 57.267 33.333 0.61 0.00 0.00 1.40
402 404 6.517605 TGGCCAAACAAGAAAGGTTAAATAC 58.482 36.000 0.61 0.00 0.00 1.89
403 405 6.325286 TGGCCAAACAAGAAAGGTTAAATACT 59.675 34.615 0.61 0.00 0.00 2.12
404 406 7.147637 TGGCCAAACAAGAAAGGTTAAATACTT 60.148 33.333 0.61 0.00 0.00 2.24
405 407 7.713507 GGCCAAACAAGAAAGGTTAAATACTTT 59.286 33.333 0.00 0.00 39.45 2.66
406 408 9.104965 GCCAAACAAGAAAGGTTAAATACTTTT 57.895 29.630 0.00 0.00 38.60 2.27
471 473 6.791887 TTTTCTCTCACTTGCATGACTAAG 57.208 37.500 6.60 0.00 0.00 2.18
472 474 3.854666 TCTCTCACTTGCATGACTAAGC 58.145 45.455 6.60 0.00 0.00 3.09
473 475 2.935201 CTCTCACTTGCATGACTAAGCC 59.065 50.000 6.60 0.00 0.00 4.35
474 476 2.012673 CTCACTTGCATGACTAAGCCC 58.987 52.381 6.60 0.00 0.00 5.19
475 477 1.630369 TCACTTGCATGACTAAGCCCT 59.370 47.619 6.60 0.00 0.00 5.19
476 478 2.837591 TCACTTGCATGACTAAGCCCTA 59.162 45.455 6.60 0.00 0.00 3.53
477 479 2.939103 CACTTGCATGACTAAGCCCTAC 59.061 50.000 6.60 0.00 0.00 3.18
478 480 2.571653 ACTTGCATGACTAAGCCCTACA 59.428 45.455 6.60 0.00 0.00 2.74
479 481 3.009033 ACTTGCATGACTAAGCCCTACAA 59.991 43.478 6.60 0.00 0.00 2.41
480 482 3.931907 TGCATGACTAAGCCCTACAAT 57.068 42.857 0.00 0.00 0.00 2.71
481 483 4.235079 TGCATGACTAAGCCCTACAATT 57.765 40.909 0.00 0.00 0.00 2.32
482 484 4.199310 TGCATGACTAAGCCCTACAATTC 58.801 43.478 0.00 0.00 0.00 2.17
483 485 4.199310 GCATGACTAAGCCCTACAATTCA 58.801 43.478 0.00 0.00 0.00 2.57
484 486 4.035675 GCATGACTAAGCCCTACAATTCAC 59.964 45.833 0.00 0.00 0.00 3.18
485 487 4.901197 TGACTAAGCCCTACAATTCACA 57.099 40.909 0.00 0.00 0.00 3.58
486 488 4.832248 TGACTAAGCCCTACAATTCACAG 58.168 43.478 0.00 0.00 0.00 3.66
487 489 4.192317 GACTAAGCCCTACAATTCACAGG 58.808 47.826 0.00 0.00 0.00 4.00
496 498 6.013842 CCTACAATTCACAGGGAAGAAAAC 57.986 41.667 0.00 0.00 39.30 2.43
497 499 5.534654 CCTACAATTCACAGGGAAGAAAACA 59.465 40.000 0.00 0.00 39.30 2.83
498 500 6.209391 CCTACAATTCACAGGGAAGAAAACAT 59.791 38.462 0.00 0.00 39.30 2.71
499 501 5.846203 ACAATTCACAGGGAAGAAAACATG 58.154 37.500 0.00 0.00 39.30 3.21
500 502 5.363580 ACAATTCACAGGGAAGAAAACATGT 59.636 36.000 0.00 0.00 39.30 3.21
501 503 5.712152 ATTCACAGGGAAGAAAACATGTC 57.288 39.130 0.00 0.00 39.30 3.06
502 504 4.163441 TCACAGGGAAGAAAACATGTCA 57.837 40.909 0.00 0.00 0.00 3.58
503 505 4.728772 TCACAGGGAAGAAAACATGTCAT 58.271 39.130 0.00 0.00 0.00 3.06
504 506 4.761739 TCACAGGGAAGAAAACATGTCATC 59.238 41.667 0.00 0.22 0.00 2.92
505 507 4.520111 CACAGGGAAGAAAACATGTCATCA 59.480 41.667 0.00 0.00 0.00 3.07
506 508 4.520492 ACAGGGAAGAAAACATGTCATCAC 59.480 41.667 0.00 0.00 0.00 3.06
507 509 4.520111 CAGGGAAGAAAACATGTCATCACA 59.480 41.667 0.00 0.00 36.78 3.58
508 510 4.763793 AGGGAAGAAAACATGTCATCACAG 59.236 41.667 0.00 0.00 35.41 3.66
509 511 4.479619 GGAAGAAAACATGTCATCACAGC 58.520 43.478 0.00 0.00 35.41 4.40
510 512 4.022935 GGAAGAAAACATGTCATCACAGCA 60.023 41.667 0.00 0.00 35.41 4.41
511 513 4.761235 AGAAAACATGTCATCACAGCAG 57.239 40.909 0.00 0.00 35.41 4.24
512 514 4.139786 AGAAAACATGTCATCACAGCAGT 58.860 39.130 0.00 0.00 35.41 4.40
514 516 1.162698 ACATGTCATCACAGCAGTGC 58.837 50.000 7.13 7.13 45.49 4.40
515 517 1.161843 CATGTCATCACAGCAGTGCA 58.838 50.000 19.20 0.00 45.49 4.57
516 518 1.743394 CATGTCATCACAGCAGTGCAT 59.257 47.619 19.20 1.27 45.49 3.96
517 519 1.161843 TGTCATCACAGCAGTGCATG 58.838 50.000 19.20 15.12 45.49 4.06
530 532 3.961182 CAGTGCATGCATTAGTTCATCC 58.039 45.455 25.64 6.58 0.00 3.51
531 533 3.630769 CAGTGCATGCATTAGTTCATCCT 59.369 43.478 25.64 9.03 0.00 3.24
532 534 4.097437 CAGTGCATGCATTAGTTCATCCTT 59.903 41.667 25.64 0.00 0.00 3.36
533 535 4.337555 AGTGCATGCATTAGTTCATCCTTC 59.662 41.667 25.64 5.31 0.00 3.46
534 536 3.313249 TGCATGCATTAGTTCATCCTTCG 59.687 43.478 18.46 0.00 0.00 3.79
535 537 3.304257 GCATGCATTAGTTCATCCTTCGG 60.304 47.826 14.21 0.00 0.00 4.30
536 538 3.627395 TGCATTAGTTCATCCTTCGGT 57.373 42.857 0.00 0.00 0.00 4.69
537 539 4.746535 TGCATTAGTTCATCCTTCGGTA 57.253 40.909 0.00 0.00 0.00 4.02
538 540 4.693283 TGCATTAGTTCATCCTTCGGTAG 58.307 43.478 0.00 0.00 0.00 3.18
539 541 4.161565 TGCATTAGTTCATCCTTCGGTAGT 59.838 41.667 0.00 0.00 0.00 2.73
540 542 4.508124 GCATTAGTTCATCCTTCGGTAGTG 59.492 45.833 0.00 0.00 0.00 2.74
541 543 5.661458 CATTAGTTCATCCTTCGGTAGTGT 58.339 41.667 0.00 0.00 0.00 3.55
542 544 5.733620 TTAGTTCATCCTTCGGTAGTGTT 57.266 39.130 0.00 0.00 0.00 3.32
543 545 3.926616 AGTTCATCCTTCGGTAGTGTTG 58.073 45.455 0.00 0.00 0.00 3.33
544 546 3.323979 AGTTCATCCTTCGGTAGTGTTGT 59.676 43.478 0.00 0.00 0.00 3.32
545 547 4.525487 AGTTCATCCTTCGGTAGTGTTGTA 59.475 41.667 0.00 0.00 0.00 2.41
546 548 5.187186 AGTTCATCCTTCGGTAGTGTTGTAT 59.813 40.000 0.00 0.00 0.00 2.29
547 549 5.006153 TCATCCTTCGGTAGTGTTGTATG 57.994 43.478 0.00 0.00 0.00 2.39
548 550 4.464951 TCATCCTTCGGTAGTGTTGTATGT 59.535 41.667 0.00 0.00 0.00 2.29
549 551 4.182693 TCCTTCGGTAGTGTTGTATGTG 57.817 45.455 0.00 0.00 0.00 3.21
550 552 2.671396 CCTTCGGTAGTGTTGTATGTGC 59.329 50.000 0.00 0.00 0.00 4.57
551 553 3.322369 CTTCGGTAGTGTTGTATGTGCA 58.678 45.455 0.00 0.00 0.00 4.57
552 554 3.603158 TCGGTAGTGTTGTATGTGCAT 57.397 42.857 0.00 0.00 0.00 3.96
553 555 3.258228 TCGGTAGTGTTGTATGTGCATG 58.742 45.455 0.00 0.00 0.00 4.06
554 556 2.223021 CGGTAGTGTTGTATGTGCATGC 60.223 50.000 11.82 11.82 0.00 4.06
555 557 2.223021 GGTAGTGTTGTATGTGCATGCG 60.223 50.000 14.09 0.00 0.00 4.73
556 558 1.522668 AGTGTTGTATGTGCATGCGT 58.477 45.000 14.09 4.18 0.00 5.24
557 559 1.464608 AGTGTTGTATGTGCATGCGTC 59.535 47.619 14.09 9.43 0.00 5.19
558 560 1.464608 GTGTTGTATGTGCATGCGTCT 59.535 47.619 14.09 1.89 0.00 4.18
559 561 1.731709 TGTTGTATGTGCATGCGTCTC 59.268 47.619 14.09 4.21 0.00 3.36
560 562 1.731709 GTTGTATGTGCATGCGTCTCA 59.268 47.619 14.09 9.91 0.00 3.27
561 563 2.091852 TGTATGTGCATGCGTCTCAA 57.908 45.000 14.09 0.00 0.00 3.02
562 564 2.001872 TGTATGTGCATGCGTCTCAAG 58.998 47.619 14.09 0.00 0.00 3.02
563 565 1.328680 GTATGTGCATGCGTCTCAAGG 59.671 52.381 14.09 0.00 0.00 3.61
564 566 0.321919 ATGTGCATGCGTCTCAAGGT 60.322 50.000 14.09 0.00 0.00 3.50
565 567 0.320050 TGTGCATGCGTCTCAAGGTA 59.680 50.000 14.09 0.00 0.00 3.08
566 568 0.721718 GTGCATGCGTCTCAAGGTAC 59.278 55.000 14.09 0.00 0.00 3.34
567 569 0.735978 TGCATGCGTCTCAAGGTACG 60.736 55.000 14.09 0.00 41.92 3.67
568 570 0.736325 GCATGCGTCTCAAGGTACGT 60.736 55.000 0.00 0.00 41.10 3.57
569 571 1.468565 GCATGCGTCTCAAGGTACGTA 60.469 52.381 0.00 0.00 41.10 3.57
570 572 2.871133 CATGCGTCTCAAGGTACGTAA 58.129 47.619 0.00 0.00 41.10 3.18
571 573 3.444916 CATGCGTCTCAAGGTACGTAAT 58.555 45.455 0.00 0.00 41.10 1.89
572 574 4.603985 CATGCGTCTCAAGGTACGTAATA 58.396 43.478 0.00 0.00 41.10 0.98
573 575 4.282950 TGCGTCTCAAGGTACGTAATAG 57.717 45.455 0.00 0.00 41.10 1.73
574 576 3.691118 TGCGTCTCAAGGTACGTAATAGT 59.309 43.478 0.00 0.00 41.10 2.12
575 577 4.875536 TGCGTCTCAAGGTACGTAATAGTA 59.124 41.667 0.00 0.00 41.10 1.82
576 578 5.201181 GCGTCTCAAGGTACGTAATAGTAC 58.799 45.833 0.00 0.00 44.50 2.73
577 579 5.220662 GCGTCTCAAGGTACGTAATAGTACA 60.221 44.000 0.00 0.00 46.40 2.90
578 580 6.512415 GCGTCTCAAGGTACGTAATAGTACAT 60.512 42.308 0.00 0.00 46.40 2.29
579 581 6.849811 CGTCTCAAGGTACGTAATAGTACATG 59.150 42.308 0.00 0.00 46.40 3.21
580 582 6.636044 GTCTCAAGGTACGTAATAGTACATGC 59.364 42.308 0.00 0.00 46.40 4.06
581 583 6.319405 TCTCAAGGTACGTAATAGTACATGCA 59.681 38.462 0.00 0.00 46.40 3.96
582 584 7.013942 TCTCAAGGTACGTAATAGTACATGCAT 59.986 37.037 0.00 0.00 46.40 3.96
583 585 8.168790 TCAAGGTACGTAATAGTACATGCATA 57.831 34.615 0.00 0.00 46.40 3.14
584 586 8.799367 TCAAGGTACGTAATAGTACATGCATAT 58.201 33.333 0.00 0.00 46.40 1.78
588 590 9.674824 GGTACGTAATAGTACATGCATATATCC 57.325 37.037 0.00 0.00 46.40 2.59
591 593 9.803315 ACGTAATAGTACATGCATATATCCAAG 57.197 33.333 0.00 0.00 0.00 3.61
592 594 9.249457 CGTAATAGTACATGCATATATCCAAGG 57.751 37.037 0.00 0.00 0.00 3.61
593 595 9.046296 GTAATAGTACATGCATATATCCAAGGC 57.954 37.037 0.00 0.00 0.00 4.35
594 596 4.848357 AGTACATGCATATATCCAAGGCC 58.152 43.478 0.00 0.00 0.00 5.19
595 597 3.812611 ACATGCATATATCCAAGGCCA 57.187 42.857 5.01 0.00 0.00 5.36
596 598 4.116782 ACATGCATATATCCAAGGCCAA 57.883 40.909 5.01 0.00 0.00 4.52
597 599 4.084287 ACATGCATATATCCAAGGCCAAG 58.916 43.478 5.01 0.00 0.00 3.61
598 600 3.159213 TGCATATATCCAAGGCCAAGG 57.841 47.619 5.01 6.28 0.00 3.61
599 601 2.446666 TGCATATATCCAAGGCCAAGGT 59.553 45.455 5.01 0.00 0.00 3.50
600 602 3.655291 TGCATATATCCAAGGCCAAGGTA 59.345 43.478 5.01 2.10 0.00 3.08
601 603 4.292041 TGCATATATCCAAGGCCAAGGTAT 59.708 41.667 5.01 9.18 0.00 2.73
602 604 5.490717 TGCATATATCCAAGGCCAAGGTATA 59.509 40.000 5.01 10.90 0.00 1.47
603 605 6.012069 TGCATATATCCAAGGCCAAGGTATAA 60.012 38.462 5.01 0.00 0.00 0.98
604 606 6.889722 GCATATATCCAAGGCCAAGGTATAAA 59.110 38.462 5.01 0.00 0.00 1.40
605 607 7.396055 GCATATATCCAAGGCCAAGGTATAAAA 59.604 37.037 5.01 1.04 0.00 1.52
606 608 8.960591 CATATATCCAAGGCCAAGGTATAAAAG 58.039 37.037 5.01 3.49 0.00 2.27
607 609 3.976015 TCCAAGGCCAAGGTATAAAAGG 58.024 45.455 5.01 0.00 0.00 3.11
608 610 2.430694 CCAAGGCCAAGGTATAAAAGGC 59.569 50.000 5.01 0.00 44.48 4.35
609 611 3.096092 CAAGGCCAAGGTATAAAAGGCA 58.904 45.455 5.01 0.00 46.96 4.75
610 612 3.688049 AGGCCAAGGTATAAAAGGCAT 57.312 42.857 5.01 0.00 46.96 4.40
611 613 3.299503 AGGCCAAGGTATAAAAGGCATG 58.700 45.455 5.01 0.00 46.96 4.06
612 614 2.224042 GGCCAAGGTATAAAAGGCATGC 60.224 50.000 9.90 9.90 46.96 4.06
613 615 2.430332 GCCAAGGTATAAAAGGCATGCA 59.570 45.455 21.36 0.00 44.59 3.96
614 616 3.737972 GCCAAGGTATAAAAGGCATGCAC 60.738 47.826 21.36 9.10 44.59 4.57
615 617 3.446873 CCAAGGTATAAAAGGCATGCACA 59.553 43.478 21.36 0.00 0.00 4.57
616 618 4.081752 CCAAGGTATAAAAGGCATGCACAA 60.082 41.667 21.36 0.00 0.00 3.33
617 619 5.395546 CCAAGGTATAAAAGGCATGCACAAT 60.396 40.000 21.36 7.67 0.00 2.71
618 620 5.266733 AGGTATAAAAGGCATGCACAATG 57.733 39.130 21.36 0.00 39.49 2.82
619 621 4.955450 AGGTATAAAAGGCATGCACAATGA 59.045 37.500 21.36 0.00 38.72 2.57
620 622 5.599656 AGGTATAAAAGGCATGCACAATGAT 59.400 36.000 21.36 7.66 38.72 2.45
621 623 6.098695 AGGTATAAAAGGCATGCACAATGATT 59.901 34.615 21.36 6.67 38.72 2.57
622 624 7.287466 AGGTATAAAAGGCATGCACAATGATTA 59.713 33.333 21.36 8.61 38.72 1.75
623 625 7.596248 GGTATAAAAGGCATGCACAATGATTAG 59.404 37.037 21.36 0.00 38.72 1.73
624 626 5.410355 AAAAGGCATGCACAATGATTAGT 57.590 34.783 21.36 0.00 38.72 2.24
625 627 4.380841 AAGGCATGCACAATGATTAGTG 57.619 40.909 21.36 4.20 38.72 2.74
638 640 9.955208 CACAATGATTAGTGCATACAAATACAT 57.045 29.630 0.00 0.00 0.00 2.29
661 663 9.551734 ACATACTAGAAAACTAAAAAGGTTCGT 57.448 29.630 0.00 0.00 0.00 3.85
663 665 7.170240 ACTAGAAAACTAAAAAGGTTCGTCG 57.830 36.000 0.00 0.00 0.00 5.12
664 666 6.758416 ACTAGAAAACTAAAAAGGTTCGTCGT 59.242 34.615 0.00 0.00 0.00 4.34
665 667 7.920682 ACTAGAAAACTAAAAAGGTTCGTCGTA 59.079 33.333 0.00 0.00 0.00 3.43
666 668 6.937457 AGAAAACTAAAAAGGTTCGTCGTAC 58.063 36.000 0.00 0.00 0.00 3.67
667 669 6.534793 AGAAAACTAAAAAGGTTCGTCGTACA 59.465 34.615 4.34 0.00 0.00 2.90
668 670 5.641777 AACTAAAAAGGTTCGTCGTACAC 57.358 39.130 4.34 0.00 0.00 2.90
673 675 0.040067 AGGTTCGTCGTACACGGAAC 60.040 55.000 14.80 12.55 45.19 3.62
679 681 2.882876 CGTCGTACACGGAACTTTTTG 58.117 47.619 1.39 0.00 45.46 2.44
680 682 2.535166 CGTCGTACACGGAACTTTTTGA 59.465 45.455 1.39 0.00 45.46 2.69
681 683 3.361339 CGTCGTACACGGAACTTTTTGAG 60.361 47.826 1.39 0.00 45.46 3.02
682 684 3.798337 GTCGTACACGGAACTTTTTGAGA 59.202 43.478 1.39 0.00 40.29 3.27
683 685 4.446719 GTCGTACACGGAACTTTTTGAGAT 59.553 41.667 1.39 0.00 40.29 2.75
684 686 5.050567 GTCGTACACGGAACTTTTTGAGATT 60.051 40.000 1.39 0.00 40.29 2.40
685 687 5.524646 TCGTACACGGAACTTTTTGAGATTT 59.475 36.000 1.39 0.00 40.29 2.17
686 688 6.700960 TCGTACACGGAACTTTTTGAGATTTA 59.299 34.615 1.39 0.00 40.29 1.40
687 689 7.007697 CGTACACGGAACTTTTTGAGATTTAG 58.992 38.462 0.00 0.00 35.37 1.85
688 690 7.095940 CGTACACGGAACTTTTTGAGATTTAGA 60.096 37.037 0.00 0.00 35.37 2.10
689 691 7.562454 ACACGGAACTTTTTGAGATTTAGAA 57.438 32.000 0.00 0.00 0.00 2.10
690 692 7.992008 ACACGGAACTTTTTGAGATTTAGAAA 58.008 30.769 0.00 0.00 0.00 2.52
691 693 8.463607 ACACGGAACTTTTTGAGATTTAGAAAA 58.536 29.630 0.00 0.00 0.00 2.29
692 694 9.296400 CACGGAACTTTTTGAGATTTAGAAAAA 57.704 29.630 0.00 0.00 0.00 1.94
693 695 9.297586 ACGGAACTTTTTGAGATTTAGAAAAAC 57.702 29.630 0.00 0.00 0.00 2.43
694 696 9.296400 CGGAACTTTTTGAGATTTAGAAAAACA 57.704 29.630 0.00 0.00 0.00 2.83
697 699 9.634163 AACTTTTTGAGATTTAGAAAAACACGT 57.366 25.926 0.00 0.00 0.00 4.49
698 700 9.634163 ACTTTTTGAGATTTAGAAAAACACGTT 57.366 25.926 0.00 0.00 0.00 3.99
746 748 9.744468 AAGTTTGGAACTACAAATATTGTTCAC 57.256 29.630 14.73 7.50 44.76 3.18
747 749 8.908903 AGTTTGGAACTACAAATATTGTTCACA 58.091 29.630 14.73 9.43 44.76 3.58
748 750 8.964150 GTTTGGAACTACAAATATTGTTCACAC 58.036 33.333 14.73 7.11 42.22 3.82
749 751 8.458573 TTGGAACTACAAATATTGTTCACACT 57.541 30.769 14.73 0.00 42.22 3.55
750 752 8.458573 TGGAACTACAAATATTGTTCACACTT 57.541 30.769 14.73 0.00 42.22 3.16
751 753 9.562408 TGGAACTACAAATATTGTTCACACTTA 57.438 29.630 14.73 0.00 42.22 2.24
914 921 0.401738 CCCTCCTTGCTGGTTCTTCA 59.598 55.000 0.00 0.00 37.07 3.02
1125 1177 1.971695 GGAACAAGAAGCACCCCCG 60.972 63.158 0.00 0.00 0.00 5.73
1775 1866 2.282958 TCCAGGAGAAGGACGCGT 60.283 61.111 13.85 13.85 0.00 6.01
2356 2460 3.322541 GGTAGAAGTGGAGGCTTAGGATC 59.677 52.174 0.00 0.00 0.00 3.36
2578 2728 6.072112 AGATTTTAACGAAGTGTTGCATGT 57.928 33.333 0.00 0.00 45.00 3.21
2967 3123 2.031012 CGGCCTGCAGTTCAGTGA 59.969 61.111 13.81 0.00 41.25 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.543749 GCCTGATGGTTCTGGTAGCT 59.456 55.000 0.00 0.00 41.70 3.32
1 2 0.543749 AGCCTGATGGTTCTGGTAGC 59.456 55.000 1.62 0.00 41.70 3.58
2 3 3.432326 GGTTAGCCTGATGGTTCTGGTAG 60.432 52.174 0.00 0.00 41.70 3.18
3 4 2.504175 GGTTAGCCTGATGGTTCTGGTA 59.496 50.000 0.00 0.00 41.70 3.25
4 5 1.282157 GGTTAGCCTGATGGTTCTGGT 59.718 52.381 0.00 0.00 41.70 4.00
5 6 1.281867 TGGTTAGCCTGATGGTTCTGG 59.718 52.381 0.00 0.00 42.36 3.86
6 7 2.787473 TGGTTAGCCTGATGGTTCTG 57.213 50.000 0.00 0.00 35.27 3.02
7 8 3.074538 ACTTTGGTTAGCCTGATGGTTCT 59.925 43.478 0.00 0.00 35.27 3.01
8 9 3.421844 ACTTTGGTTAGCCTGATGGTTC 58.578 45.455 0.00 0.00 35.27 3.62
9 10 3.525800 ACTTTGGTTAGCCTGATGGTT 57.474 42.857 0.00 0.00 35.27 3.67
10 11 3.525800 AACTTTGGTTAGCCTGATGGT 57.474 42.857 0.00 0.00 33.39 3.55
11 12 3.374058 CGTAACTTTGGTTAGCCTGATGG 59.626 47.826 0.00 0.00 38.42 3.51
12 13 3.181510 GCGTAACTTTGGTTAGCCTGATG 60.182 47.826 0.00 0.00 38.42 3.07
13 14 3.007635 GCGTAACTTTGGTTAGCCTGAT 58.992 45.455 0.00 0.00 38.42 2.90
14 15 2.038033 AGCGTAACTTTGGTTAGCCTGA 59.962 45.455 0.00 0.00 38.42 3.86
15 16 2.415512 GAGCGTAACTTTGGTTAGCCTG 59.584 50.000 0.00 0.00 38.42 4.85
16 17 2.038033 TGAGCGTAACTTTGGTTAGCCT 59.962 45.455 0.00 0.00 38.42 4.58
17 18 2.159037 GTGAGCGTAACTTTGGTTAGCC 59.841 50.000 0.00 0.00 38.42 3.93
18 19 2.159881 CGTGAGCGTAACTTTGGTTAGC 60.160 50.000 0.00 0.00 38.42 3.09
19 20 3.700130 CGTGAGCGTAACTTTGGTTAG 57.300 47.619 0.00 0.00 38.42 2.34
34 35 1.576356 GATTTAGGCTCCTGCGTGAG 58.424 55.000 0.00 0.00 40.82 3.51
35 36 0.178068 GGATTTAGGCTCCTGCGTGA 59.822 55.000 0.00 0.00 40.82 4.35
36 37 0.107703 TGGATTTAGGCTCCTGCGTG 60.108 55.000 0.00 0.00 40.82 5.34
37 38 0.107654 GTGGATTTAGGCTCCTGCGT 60.108 55.000 0.00 0.00 40.82 5.24
38 39 0.179000 AGTGGATTTAGGCTCCTGCG 59.821 55.000 0.00 0.00 40.82 5.18
39 40 1.210478 TGAGTGGATTTAGGCTCCTGC 59.790 52.381 0.00 0.00 33.69 4.85
40 41 2.237143 TGTGAGTGGATTTAGGCTCCTG 59.763 50.000 0.00 0.00 33.69 3.86
41 42 2.237392 GTGTGAGTGGATTTAGGCTCCT 59.763 50.000 0.00 0.00 33.69 3.69
42 43 2.633488 GTGTGAGTGGATTTAGGCTCC 58.367 52.381 0.00 0.00 0.00 4.70
43 44 2.027192 TGGTGTGAGTGGATTTAGGCTC 60.027 50.000 0.00 0.00 0.00 4.70
44 45 1.985159 TGGTGTGAGTGGATTTAGGCT 59.015 47.619 0.00 0.00 0.00 4.58
45 46 2.084546 GTGGTGTGAGTGGATTTAGGC 58.915 52.381 0.00 0.00 0.00 3.93
46 47 2.039746 TGGTGGTGTGAGTGGATTTAGG 59.960 50.000 0.00 0.00 0.00 2.69
47 48 3.417069 TGGTGGTGTGAGTGGATTTAG 57.583 47.619 0.00 0.00 0.00 1.85
48 49 3.750371 CTTGGTGGTGTGAGTGGATTTA 58.250 45.455 0.00 0.00 0.00 1.40
49 50 2.586425 CTTGGTGGTGTGAGTGGATTT 58.414 47.619 0.00 0.00 0.00 2.17
50 51 1.819305 GCTTGGTGGTGTGAGTGGATT 60.819 52.381 0.00 0.00 0.00 3.01
51 52 0.250901 GCTTGGTGGTGTGAGTGGAT 60.251 55.000 0.00 0.00 0.00 3.41
52 53 1.148273 GCTTGGTGGTGTGAGTGGA 59.852 57.895 0.00 0.00 0.00 4.02
53 54 0.396435 TAGCTTGGTGGTGTGAGTGG 59.604 55.000 0.00 0.00 0.00 4.00
54 55 1.202639 TGTAGCTTGGTGGTGTGAGTG 60.203 52.381 0.00 0.00 0.00 3.51
55 56 1.070758 CTGTAGCTTGGTGGTGTGAGT 59.929 52.381 0.00 0.00 0.00 3.41
56 57 1.344438 TCTGTAGCTTGGTGGTGTGAG 59.656 52.381 0.00 0.00 0.00 3.51
57 58 1.419381 TCTGTAGCTTGGTGGTGTGA 58.581 50.000 0.00 0.00 0.00 3.58
58 59 2.479566 ATCTGTAGCTTGGTGGTGTG 57.520 50.000 0.00 0.00 0.00 3.82
59 60 2.236395 GGTATCTGTAGCTTGGTGGTGT 59.764 50.000 0.00 0.00 0.00 4.16
60 61 2.236146 TGGTATCTGTAGCTTGGTGGTG 59.764 50.000 0.00 0.00 0.00 4.17
61 62 2.546899 TGGTATCTGTAGCTTGGTGGT 58.453 47.619 0.00 0.00 0.00 4.16
62 63 3.627395 TTGGTATCTGTAGCTTGGTGG 57.373 47.619 0.00 0.00 0.00 4.61
63 64 4.396166 CCTTTTGGTATCTGTAGCTTGGTG 59.604 45.833 0.00 0.00 34.07 4.17
64 65 4.589908 CCTTTTGGTATCTGTAGCTTGGT 58.410 43.478 0.00 0.00 34.07 3.67
80 81 6.648879 TTTCCATTGTTCCTAGACCTTTTG 57.351 37.500 0.00 0.00 0.00 2.44
81 82 5.243954 GCTTTCCATTGTTCCTAGACCTTTT 59.756 40.000 0.00 0.00 0.00 2.27
82 83 4.767409 GCTTTCCATTGTTCCTAGACCTTT 59.233 41.667 0.00 0.00 0.00 3.11
83 84 4.202567 TGCTTTCCATTGTTCCTAGACCTT 60.203 41.667 0.00 0.00 0.00 3.50
84 85 3.330701 TGCTTTCCATTGTTCCTAGACCT 59.669 43.478 0.00 0.00 0.00 3.85
85 86 3.686016 TGCTTTCCATTGTTCCTAGACC 58.314 45.455 0.00 0.00 0.00 3.85
86 87 4.702131 ACATGCTTTCCATTGTTCCTAGAC 59.298 41.667 0.00 0.00 29.71 2.59
87 88 4.922206 ACATGCTTTCCATTGTTCCTAGA 58.078 39.130 0.00 0.00 29.71 2.43
88 89 4.096984 GGACATGCTTTCCATTGTTCCTAG 59.903 45.833 0.00 0.00 32.82 3.02
89 90 4.016444 GGACATGCTTTCCATTGTTCCTA 58.984 43.478 0.00 0.00 32.82 2.94
90 91 2.827921 GGACATGCTTTCCATTGTTCCT 59.172 45.455 0.00 0.00 32.82 3.36
91 92 2.094026 GGGACATGCTTTCCATTGTTCC 60.094 50.000 3.48 0.00 34.45 3.62
92 93 2.562298 TGGGACATGCTTTCCATTGTTC 59.438 45.455 3.48 0.00 34.45 3.18
93 94 2.564062 CTGGGACATGCTTTCCATTGTT 59.436 45.455 3.48 0.00 38.20 2.83
94 95 2.173519 CTGGGACATGCTTTCCATTGT 58.826 47.619 3.48 0.00 38.20 2.71
95 96 1.479323 CCTGGGACATGCTTTCCATTG 59.521 52.381 3.48 0.00 38.20 2.82
96 97 1.856629 CCTGGGACATGCTTTCCATT 58.143 50.000 3.48 0.00 38.20 3.16
97 98 0.685458 GCCTGGGACATGCTTTCCAT 60.685 55.000 3.48 0.00 46.33 3.41
98 99 1.304381 GCCTGGGACATGCTTTCCA 60.304 57.895 3.48 0.88 46.33 3.53
99 100 3.608432 GCCTGGGACATGCTTTCC 58.392 61.111 0.00 0.00 46.33 3.13
104 105 2.359850 TGTTCGCCTGGGACATGC 60.360 61.111 0.00 0.00 46.37 4.06
105 106 1.746615 CCTGTTCGCCTGGGACATG 60.747 63.158 0.00 0.00 38.20 3.21
106 107 2.671070 CCTGTTCGCCTGGGACAT 59.329 61.111 0.00 0.00 38.20 3.06
107 108 4.329545 GCCTGTTCGCCTGGGACA 62.330 66.667 0.00 0.00 32.93 4.02
108 109 3.842925 TTGCCTGTTCGCCTGGGAC 62.843 63.158 0.00 0.00 32.16 4.46
109 110 3.565214 TTGCCTGTTCGCCTGGGA 61.565 61.111 0.00 0.00 32.93 4.37
110 111 3.365265 GTTGCCTGTTCGCCTGGG 61.365 66.667 0.00 0.00 32.93 4.45
111 112 2.281761 AGTTGCCTGTTCGCCTGG 60.282 61.111 0.00 0.00 35.34 4.45
112 113 1.572085 CTCAGTTGCCTGTTCGCCTG 61.572 60.000 0.00 0.00 39.82 4.85
113 114 1.302033 CTCAGTTGCCTGTTCGCCT 60.302 57.895 0.00 0.00 39.82 5.52
114 115 0.674895 ATCTCAGTTGCCTGTTCGCC 60.675 55.000 0.00 0.00 39.82 5.54
115 116 1.135859 CAATCTCAGTTGCCTGTTCGC 60.136 52.381 0.00 0.00 39.82 4.70
116 117 2.158449 GTCAATCTCAGTTGCCTGTTCG 59.842 50.000 0.00 0.00 39.82 3.95
117 118 2.485814 GGTCAATCTCAGTTGCCTGTTC 59.514 50.000 0.00 0.00 39.82 3.18
118 119 2.107204 AGGTCAATCTCAGTTGCCTGTT 59.893 45.455 0.00 0.00 39.82 3.16
119 120 1.701847 AGGTCAATCTCAGTTGCCTGT 59.298 47.619 0.00 0.00 39.82 4.00
120 121 2.082231 CAGGTCAATCTCAGTTGCCTG 58.918 52.381 12.30 12.30 41.89 4.85
121 122 1.701847 ACAGGTCAATCTCAGTTGCCT 59.298 47.619 0.00 0.00 36.62 4.75
122 123 2.191128 ACAGGTCAATCTCAGTTGCC 57.809 50.000 0.00 0.00 0.00 4.52
123 124 4.574599 AAAACAGGTCAATCTCAGTTGC 57.425 40.909 0.00 0.00 0.00 4.17
143 144 8.434392 AGGATGTACTTGTAACTAGGACAAAAA 58.566 33.333 12.08 3.10 39.77 1.94
144 145 7.970102 AGGATGTACTTGTAACTAGGACAAAA 58.030 34.615 12.08 3.38 39.77 2.44
145 146 7.549147 AGGATGTACTTGTAACTAGGACAAA 57.451 36.000 12.08 0.87 39.77 2.83
146 147 6.127814 CGAGGATGTACTTGTAACTAGGACAA 60.128 42.308 10.89 10.89 39.77 3.18
147 148 5.356190 CGAGGATGTACTTGTAACTAGGACA 59.644 44.000 0.33 0.33 40.58 4.02
148 149 5.587844 TCGAGGATGTACTTGTAACTAGGAC 59.412 44.000 0.00 0.00 0.00 3.85
149 150 5.748402 TCGAGGATGTACTTGTAACTAGGA 58.252 41.667 0.00 0.00 0.00 2.94
150 151 5.821470 TCTCGAGGATGTACTTGTAACTAGG 59.179 44.000 13.56 0.00 0.00 3.02
151 152 6.509837 CGTCTCGAGGATGTACTTGTAACTAG 60.510 46.154 13.56 0.00 0.00 2.57
152 153 5.292834 CGTCTCGAGGATGTACTTGTAACTA 59.707 44.000 13.56 0.00 0.00 2.24
153 154 4.094590 CGTCTCGAGGATGTACTTGTAACT 59.905 45.833 13.56 0.00 0.00 2.24
154 155 4.341099 CGTCTCGAGGATGTACTTGTAAC 58.659 47.826 13.56 0.00 0.00 2.50
155 156 3.181503 GCGTCTCGAGGATGTACTTGTAA 60.182 47.826 13.56 0.00 33.69 2.41
156 157 2.353889 GCGTCTCGAGGATGTACTTGTA 59.646 50.000 13.56 0.00 33.69 2.41
157 158 1.132643 GCGTCTCGAGGATGTACTTGT 59.867 52.381 13.56 0.00 33.69 3.16
158 159 1.132453 TGCGTCTCGAGGATGTACTTG 59.868 52.381 13.56 0.00 33.69 3.16
159 160 1.460504 TGCGTCTCGAGGATGTACTT 58.539 50.000 13.56 0.00 33.69 2.24
160 161 1.460504 TTGCGTCTCGAGGATGTACT 58.539 50.000 13.56 0.00 33.69 2.73
161 162 1.918609 GTTTGCGTCTCGAGGATGTAC 59.081 52.381 13.56 1.52 33.69 2.90
162 163 1.816835 AGTTTGCGTCTCGAGGATGTA 59.183 47.619 13.56 1.87 33.69 2.29
163 164 0.603569 AGTTTGCGTCTCGAGGATGT 59.396 50.000 13.56 0.00 33.69 3.06
164 165 0.994995 CAGTTTGCGTCTCGAGGATG 59.005 55.000 13.56 6.18 0.00 3.51
165 166 0.108615 CCAGTTTGCGTCTCGAGGAT 60.109 55.000 13.56 0.00 0.00 3.24
166 167 1.289066 CCAGTTTGCGTCTCGAGGA 59.711 57.895 13.56 0.00 0.00 3.71
167 168 0.600255 AACCAGTTTGCGTCTCGAGG 60.600 55.000 13.56 0.00 0.00 4.63
168 169 1.217882 AAACCAGTTTGCGTCTCGAG 58.782 50.000 5.93 5.93 0.00 4.04
169 170 1.658994 AAAACCAGTTTGCGTCTCGA 58.341 45.000 0.00 0.00 32.36 4.04
170 171 2.108700 CAAAAACCAGTTTGCGTCTCG 58.891 47.619 0.00 0.00 32.10 4.04
171 172 2.459934 CCAAAAACCAGTTTGCGTCTC 58.540 47.619 0.00 0.00 37.20 3.36
172 173 1.136110 CCCAAAAACCAGTTTGCGTCT 59.864 47.619 0.00 0.00 37.20 4.18
173 174 1.566404 CCCAAAAACCAGTTTGCGTC 58.434 50.000 0.00 0.00 37.20 5.19
174 175 0.176910 CCCCAAAAACCAGTTTGCGT 59.823 50.000 0.00 0.00 37.20 5.24
175 176 0.531753 CCCCCAAAAACCAGTTTGCG 60.532 55.000 0.00 0.00 37.20 4.85
176 177 3.395210 CCCCCAAAAACCAGTTTGC 57.605 52.632 0.00 0.00 37.20 3.68
200 201 0.179086 CAGCACAAAACACAACCCCC 60.179 55.000 0.00 0.00 0.00 5.40
201 202 0.820871 TCAGCACAAAACACAACCCC 59.179 50.000 0.00 0.00 0.00 4.95
202 203 2.888834 ATCAGCACAAAACACAACCC 57.111 45.000 0.00 0.00 0.00 4.11
203 204 7.812191 TGATATTTATCAGCACAAAACACAACC 59.188 33.333 0.00 0.00 37.76 3.77
204 205 8.741101 TGATATTTATCAGCACAAAACACAAC 57.259 30.769 0.00 0.00 37.76 3.32
205 206 9.755804 TTTGATATTTATCAGCACAAAACACAA 57.244 25.926 0.93 0.00 42.99 3.33
206 207 9.190858 GTTTGATATTTATCAGCACAAAACACA 57.809 29.630 0.00 0.00 42.99 3.72
207 208 8.647226 GGTTTGATATTTATCAGCACAAAACAC 58.353 33.333 0.00 0.00 42.99 3.32
208 209 8.363390 TGGTTTGATATTTATCAGCACAAAACA 58.637 29.630 0.00 0.00 42.99 2.83
209 210 8.755696 TGGTTTGATATTTATCAGCACAAAAC 57.244 30.769 0.00 0.00 42.99 2.43
210 211 9.368674 CATGGTTTGATATTTATCAGCACAAAA 57.631 29.630 0.00 0.00 42.99 2.44
211 212 8.530311 ACATGGTTTGATATTTATCAGCACAAA 58.470 29.630 0.00 0.00 42.99 2.83
212 213 8.065473 ACATGGTTTGATATTTATCAGCACAA 57.935 30.769 0.00 0.00 42.99 3.33
213 214 7.643569 ACATGGTTTGATATTTATCAGCACA 57.356 32.000 0.00 7.77 42.99 4.57
225 226 9.602568 ACACGTATAACATAACATGGTTTGATA 57.397 29.630 8.28 0.88 33.60 2.15
226 227 8.394877 CACACGTATAACATAACATGGTTTGAT 58.605 33.333 8.28 0.00 33.60 2.57
227 228 7.388224 ACACACGTATAACATAACATGGTTTGA 59.612 33.333 8.28 0.00 33.60 2.69
228 229 7.523219 ACACACGTATAACATAACATGGTTTG 58.477 34.615 0.00 0.00 33.60 2.93
229 230 7.675962 ACACACGTATAACATAACATGGTTT 57.324 32.000 0.00 0.00 33.60 3.27
230 231 8.822855 CATACACACGTATAACATAACATGGTT 58.177 33.333 0.00 0.00 36.11 3.67
231 232 7.982919 ACATACACACGTATAACATAACATGGT 59.017 33.333 0.00 0.00 36.11 3.55
232 233 8.360325 ACATACACACGTATAACATAACATGG 57.640 34.615 0.00 0.00 36.11 3.66
233 234 9.843874 GAACATACACACGTATAACATAACATG 57.156 33.333 0.00 0.00 36.11 3.21
234 235 9.589111 TGAACATACACACGTATAACATAACAT 57.411 29.630 0.00 0.00 36.11 2.71
235 236 8.983307 TGAACATACACACGTATAACATAACA 57.017 30.769 0.00 0.00 36.11 2.41
237 238 9.804758 TGATGAACATACACACGTATAACATAA 57.195 29.630 0.00 0.00 36.11 1.90
238 239 9.974980 ATGATGAACATACACACGTATAACATA 57.025 29.630 0.00 0.00 36.11 2.29
239 240 8.887036 ATGATGAACATACACACGTATAACAT 57.113 30.769 0.00 0.00 36.11 2.71
240 241 8.710835 AATGATGAACATACACACGTATAACA 57.289 30.769 0.00 0.00 36.11 2.41
244 245 8.942338 AACTAATGATGAACATACACACGTAT 57.058 30.769 0.00 0.00 38.96 3.06
245 246 8.652463 CAAACTAATGATGAACATACACACGTA 58.348 33.333 0.00 0.00 38.38 3.57
246 247 7.518161 CAAACTAATGATGAACATACACACGT 58.482 34.615 0.00 0.00 38.38 4.49
247 248 6.465781 GCAAACTAATGATGAACATACACACG 59.534 38.462 0.00 0.00 38.38 4.49
248 249 7.304735 TGCAAACTAATGATGAACATACACAC 58.695 34.615 0.00 0.00 38.38 3.82
249 250 7.446001 TGCAAACTAATGATGAACATACACA 57.554 32.000 0.00 0.00 38.38 3.72
250 251 8.161754 GTTGCAAACTAATGATGAACATACAC 57.838 34.615 0.00 0.00 45.32 2.90
283 284 2.094659 CAACTGCGTACGAGGGCTG 61.095 63.158 21.65 7.61 0.00 4.85
284 285 2.261671 CAACTGCGTACGAGGGCT 59.738 61.111 21.65 0.00 0.00 5.19
285 286 3.488090 GCAACTGCGTACGAGGGC 61.488 66.667 21.65 16.13 0.00 5.19
291 292 1.156736 AAGGATGTGCAACTGCGTAC 58.843 50.000 0.00 0.00 45.83 3.67
294 295 1.788308 CAAAAAGGATGTGCAACTGCG 59.212 47.619 0.00 0.00 45.83 5.18
329 330 2.604046 ATAGGCTTGCAACTAGGTCG 57.396 50.000 0.00 0.00 0.00 4.79
360 362 3.380142 GCCAAAAACACATGTCGAACAT 58.620 40.909 0.00 0.00 39.91 2.71
361 363 2.480416 GGCCAAAAACACATGTCGAACA 60.480 45.455 0.00 0.00 0.00 3.18
362 364 2.124122 GGCCAAAAACACATGTCGAAC 58.876 47.619 0.00 0.00 0.00 3.95
363 365 1.751351 TGGCCAAAAACACATGTCGAA 59.249 42.857 0.61 0.00 0.00 3.71
364 366 1.393603 TGGCCAAAAACACATGTCGA 58.606 45.000 0.61 0.00 0.00 4.20
365 367 2.215907 TTGGCCAAAAACACATGTCG 57.784 45.000 17.98 0.00 0.00 4.35
366 368 3.265791 TGTTTGGCCAAAAACACATGTC 58.734 40.909 31.92 16.42 43.34 3.06
367 369 3.340814 TGTTTGGCCAAAAACACATGT 57.659 38.095 31.92 0.00 43.34 3.21
368 370 3.937706 TCTTGTTTGGCCAAAAACACATG 59.062 39.130 31.92 24.87 46.77 3.21
369 371 4.213564 TCTTGTTTGGCCAAAAACACAT 57.786 36.364 31.92 0.00 46.77 3.21
370 372 3.685139 TCTTGTTTGGCCAAAAACACA 57.315 38.095 31.92 23.05 46.77 3.72
371 373 4.142708 CCTTTCTTGTTTGGCCAAAAACAC 60.143 41.667 31.92 20.66 46.77 3.32
372 374 4.006319 CCTTTCTTGTTTGGCCAAAAACA 58.994 39.130 31.92 24.16 45.77 2.83
373 375 4.006989 ACCTTTCTTGTTTGGCCAAAAAC 58.993 39.130 31.92 21.77 39.90 2.43
374 376 4.293662 ACCTTTCTTGTTTGGCCAAAAA 57.706 36.364 31.92 25.02 31.33 1.94
375 377 3.990959 ACCTTTCTTGTTTGGCCAAAA 57.009 38.095 31.92 17.01 31.33 2.44
376 378 3.990959 AACCTTTCTTGTTTGGCCAAA 57.009 38.095 27.13 27.13 0.00 3.28
377 379 5.422214 TTTAACCTTTCTTGTTTGGCCAA 57.578 34.783 16.05 16.05 0.00 4.52
378 380 5.622346 ATTTAACCTTTCTTGTTTGGCCA 57.378 34.783 0.00 0.00 0.00 5.36
379 381 6.755206 AGTATTTAACCTTTCTTGTTTGGCC 58.245 36.000 0.00 0.00 0.00 5.36
380 382 8.657074 AAAGTATTTAACCTTTCTTGTTTGGC 57.343 30.769 0.00 0.00 35.86 4.52
447 449 6.293626 GCTTAGTCATGCAAGTGAGAGAAAAA 60.294 38.462 0.00 0.00 0.00 1.94
448 450 5.180117 GCTTAGTCATGCAAGTGAGAGAAAA 59.820 40.000 0.00 0.00 0.00 2.29
449 451 4.692625 GCTTAGTCATGCAAGTGAGAGAAA 59.307 41.667 0.00 0.00 0.00 2.52
450 452 4.248859 GCTTAGTCATGCAAGTGAGAGAA 58.751 43.478 0.00 0.00 0.00 2.87
451 453 3.368843 GGCTTAGTCATGCAAGTGAGAGA 60.369 47.826 0.00 0.00 0.00 3.10
452 454 2.935201 GGCTTAGTCATGCAAGTGAGAG 59.065 50.000 0.00 0.00 0.00 3.20
453 455 2.355108 GGGCTTAGTCATGCAAGTGAGA 60.355 50.000 0.00 0.00 0.00 3.27
454 456 2.012673 GGGCTTAGTCATGCAAGTGAG 58.987 52.381 0.00 0.00 0.00 3.51
455 457 1.630369 AGGGCTTAGTCATGCAAGTGA 59.370 47.619 0.00 0.00 0.00 3.41
456 458 2.119801 AGGGCTTAGTCATGCAAGTG 57.880 50.000 0.00 0.00 0.00 3.16
457 459 2.571653 TGTAGGGCTTAGTCATGCAAGT 59.428 45.455 0.00 0.00 0.00 3.16
458 460 3.266510 TGTAGGGCTTAGTCATGCAAG 57.733 47.619 0.00 0.00 0.00 4.01
459 461 3.712016 TTGTAGGGCTTAGTCATGCAA 57.288 42.857 0.00 0.00 0.00 4.08
460 462 3.931907 ATTGTAGGGCTTAGTCATGCA 57.068 42.857 0.00 0.00 0.00 3.96
461 463 4.035675 GTGAATTGTAGGGCTTAGTCATGC 59.964 45.833 0.00 0.00 0.00 4.06
462 464 5.185454 TGTGAATTGTAGGGCTTAGTCATG 58.815 41.667 0.00 0.00 0.00 3.07
463 465 5.431765 CTGTGAATTGTAGGGCTTAGTCAT 58.568 41.667 0.00 0.00 0.00 3.06
464 466 4.323485 CCTGTGAATTGTAGGGCTTAGTCA 60.323 45.833 0.00 0.00 0.00 3.41
465 467 4.192317 CCTGTGAATTGTAGGGCTTAGTC 58.808 47.826 0.00 0.00 0.00 2.59
466 468 3.054361 CCCTGTGAATTGTAGGGCTTAGT 60.054 47.826 5.57 0.00 44.27 2.24
467 469 3.545703 CCCTGTGAATTGTAGGGCTTAG 58.454 50.000 5.57 0.00 44.27 2.18
468 470 3.644966 CCCTGTGAATTGTAGGGCTTA 57.355 47.619 5.57 0.00 44.27 3.09
469 471 2.514458 CCCTGTGAATTGTAGGGCTT 57.486 50.000 5.57 0.00 44.27 4.35
473 475 5.534654 TGTTTTCTTCCCTGTGAATTGTAGG 59.465 40.000 0.00 0.00 31.06 3.18
474 476 6.633500 TGTTTTCTTCCCTGTGAATTGTAG 57.367 37.500 0.00 0.00 31.06 2.74
475 477 6.549364 ACATGTTTTCTTCCCTGTGAATTGTA 59.451 34.615 0.00 0.00 31.06 2.41
476 478 5.363580 ACATGTTTTCTTCCCTGTGAATTGT 59.636 36.000 0.00 0.00 31.06 2.71
477 479 5.846203 ACATGTTTTCTTCCCTGTGAATTG 58.154 37.500 0.00 0.00 31.06 2.32
478 480 5.598005 TGACATGTTTTCTTCCCTGTGAATT 59.402 36.000 0.00 0.00 31.06 2.17
479 481 5.139727 TGACATGTTTTCTTCCCTGTGAAT 58.860 37.500 0.00 0.00 31.06 2.57
480 482 4.531854 TGACATGTTTTCTTCCCTGTGAA 58.468 39.130 0.00 0.00 0.00 3.18
481 483 4.163441 TGACATGTTTTCTTCCCTGTGA 57.837 40.909 0.00 0.00 0.00 3.58
482 484 4.520111 TGATGACATGTTTTCTTCCCTGTG 59.480 41.667 0.00 0.00 0.00 3.66
483 485 4.520492 GTGATGACATGTTTTCTTCCCTGT 59.480 41.667 0.00 0.00 0.00 4.00
484 486 4.520111 TGTGATGACATGTTTTCTTCCCTG 59.480 41.667 0.00 0.00 0.00 4.45
485 487 4.728772 TGTGATGACATGTTTTCTTCCCT 58.271 39.130 0.00 0.00 0.00 4.20
486 488 4.616835 GCTGTGATGACATGTTTTCTTCCC 60.617 45.833 0.00 0.00 0.00 3.97
487 489 4.022935 TGCTGTGATGACATGTTTTCTTCC 60.023 41.667 0.00 0.00 0.00 3.46
488 490 5.112220 TGCTGTGATGACATGTTTTCTTC 57.888 39.130 0.00 0.00 0.00 2.87
489 491 4.581824 ACTGCTGTGATGACATGTTTTCTT 59.418 37.500 0.00 0.00 0.00 2.52
490 492 4.023450 CACTGCTGTGATGACATGTTTTCT 60.023 41.667 18.08 0.00 46.55 2.52
491 493 4.224433 CACTGCTGTGATGACATGTTTTC 58.776 43.478 18.08 0.61 46.55 2.29
492 494 3.551454 GCACTGCTGTGATGACATGTTTT 60.551 43.478 25.94 0.00 46.55 2.43
493 495 2.030540 GCACTGCTGTGATGACATGTTT 60.031 45.455 25.94 0.00 46.55 2.83
494 496 1.538512 GCACTGCTGTGATGACATGTT 59.461 47.619 25.94 0.00 46.55 2.71
495 497 1.162698 GCACTGCTGTGATGACATGT 58.837 50.000 25.94 0.00 46.55 3.21
496 498 1.161843 TGCACTGCTGTGATGACATG 58.838 50.000 25.94 0.00 46.55 3.21
497 499 1.743394 CATGCACTGCTGTGATGACAT 59.257 47.619 25.94 16.12 46.55 3.06
498 500 1.161843 CATGCACTGCTGTGATGACA 58.838 50.000 25.94 14.66 46.55 3.58
499 501 3.990546 CATGCACTGCTGTGATGAC 57.009 52.632 25.94 9.62 46.55 3.06
509 511 3.630769 AGGATGAACTAATGCATGCACTG 59.369 43.478 25.37 17.77 35.59 3.66
510 512 3.894759 AGGATGAACTAATGCATGCACT 58.105 40.909 25.37 16.26 35.59 4.40
511 513 4.604976 GAAGGATGAACTAATGCATGCAC 58.395 43.478 25.37 9.84 35.59 4.57
512 514 3.313249 CGAAGGATGAACTAATGCATGCA 59.687 43.478 25.04 25.04 35.59 3.96
513 515 3.881795 CGAAGGATGAACTAATGCATGC 58.118 45.455 11.82 11.82 33.65 4.06
530 532 3.322369 TGCACATACAACACTACCGAAG 58.678 45.455 0.00 0.00 0.00 3.79
531 533 3.388345 TGCACATACAACACTACCGAA 57.612 42.857 0.00 0.00 0.00 4.30
532 534 3.258228 CATGCACATACAACACTACCGA 58.742 45.455 0.00 0.00 0.00 4.69
533 535 2.223021 GCATGCACATACAACACTACCG 60.223 50.000 14.21 0.00 0.00 4.02
534 536 2.223021 CGCATGCACATACAACACTACC 60.223 50.000 19.57 0.00 0.00 3.18
535 537 2.415168 ACGCATGCACATACAACACTAC 59.585 45.455 19.57 0.00 0.00 2.73
536 538 2.670905 GACGCATGCACATACAACACTA 59.329 45.455 19.57 0.00 0.00 2.74
537 539 1.464608 GACGCATGCACATACAACACT 59.535 47.619 19.57 0.00 0.00 3.55
538 540 1.464608 AGACGCATGCACATACAACAC 59.535 47.619 19.57 0.00 0.00 3.32
539 541 1.731709 GAGACGCATGCACATACAACA 59.268 47.619 19.57 0.00 0.00 3.33
540 542 1.731709 TGAGACGCATGCACATACAAC 59.268 47.619 19.57 1.00 0.00 3.32
541 543 2.091852 TGAGACGCATGCACATACAA 57.908 45.000 19.57 0.00 0.00 2.41
542 544 2.001872 CTTGAGACGCATGCACATACA 58.998 47.619 19.57 7.91 0.00 2.29
543 545 1.328680 CCTTGAGACGCATGCACATAC 59.671 52.381 19.57 5.29 0.00 2.39
544 546 1.066215 ACCTTGAGACGCATGCACATA 60.066 47.619 19.57 1.65 0.00 2.29
545 547 0.321919 ACCTTGAGACGCATGCACAT 60.322 50.000 19.57 1.52 0.00 3.21
546 548 0.320050 TACCTTGAGACGCATGCACA 59.680 50.000 19.57 9.00 0.00 4.57
547 549 0.721718 GTACCTTGAGACGCATGCAC 59.278 55.000 19.57 11.09 0.00 4.57
548 550 0.735978 CGTACCTTGAGACGCATGCA 60.736 55.000 19.57 0.00 31.49 3.96
549 551 0.736325 ACGTACCTTGAGACGCATGC 60.736 55.000 7.91 7.91 42.81 4.06
550 552 2.554806 TACGTACCTTGAGACGCATG 57.445 50.000 0.00 0.00 42.81 4.06
551 553 3.795623 ATTACGTACCTTGAGACGCAT 57.204 42.857 0.00 0.00 42.81 4.73
552 554 3.691118 ACTATTACGTACCTTGAGACGCA 59.309 43.478 0.00 0.00 42.81 5.24
553 555 4.284378 ACTATTACGTACCTTGAGACGC 57.716 45.455 0.00 0.00 42.81 5.19
554 556 6.349973 TGTACTATTACGTACCTTGAGACG 57.650 41.667 0.00 0.00 44.57 4.18
555 557 6.636044 GCATGTACTATTACGTACCTTGAGAC 59.364 42.308 0.00 0.00 39.14 3.36
556 558 6.319405 TGCATGTACTATTACGTACCTTGAGA 59.681 38.462 0.00 0.00 39.14 3.27
557 559 6.500910 TGCATGTACTATTACGTACCTTGAG 58.499 40.000 0.00 0.00 39.14 3.02
558 560 6.453926 TGCATGTACTATTACGTACCTTGA 57.546 37.500 0.00 0.00 39.14 3.02
559 561 8.981724 ATATGCATGTACTATTACGTACCTTG 57.018 34.615 10.16 0.00 39.14 3.61
562 564 9.674824 GGATATATGCATGTACTATTACGTACC 57.325 37.037 10.16 0.00 39.14 3.34
565 567 9.803315 CTTGGATATATGCATGTACTATTACGT 57.197 33.333 10.16 0.00 0.00 3.57
566 568 9.249457 CCTTGGATATATGCATGTACTATTACG 57.751 37.037 10.16 0.00 0.00 3.18
567 569 9.046296 GCCTTGGATATATGCATGTACTATTAC 57.954 37.037 10.16 0.00 0.00 1.89
568 570 8.210946 GGCCTTGGATATATGCATGTACTATTA 58.789 37.037 10.16 0.00 0.00 0.98
569 571 7.056635 GGCCTTGGATATATGCATGTACTATT 58.943 38.462 10.16 0.00 0.00 1.73
570 572 6.158520 TGGCCTTGGATATATGCATGTACTAT 59.841 38.462 10.16 1.21 0.00 2.12
571 573 5.487131 TGGCCTTGGATATATGCATGTACTA 59.513 40.000 10.16 1.05 0.00 1.82
572 574 4.289410 TGGCCTTGGATATATGCATGTACT 59.711 41.667 10.16 0.00 0.00 2.73
573 575 4.588899 TGGCCTTGGATATATGCATGTAC 58.411 43.478 10.16 6.16 0.00 2.90
574 576 4.925390 TGGCCTTGGATATATGCATGTA 57.075 40.909 10.16 7.68 0.00 2.29
575 577 3.812611 TGGCCTTGGATATATGCATGT 57.187 42.857 10.16 5.06 0.00 3.21
576 578 3.446161 CCTTGGCCTTGGATATATGCATG 59.554 47.826 10.16 10.08 0.00 4.06
577 579 3.076484 ACCTTGGCCTTGGATATATGCAT 59.924 43.478 19.10 3.79 0.00 3.96
578 580 2.446666 ACCTTGGCCTTGGATATATGCA 59.553 45.455 19.10 2.31 0.00 3.96
579 581 3.160679 ACCTTGGCCTTGGATATATGC 57.839 47.619 19.10 0.00 0.00 3.14
580 582 8.877864 TTTTATACCTTGGCCTTGGATATATG 57.122 34.615 19.10 0.00 0.00 1.78
581 583 8.116026 CCTTTTATACCTTGGCCTTGGATATAT 58.884 37.037 19.10 10.21 0.00 0.86
582 584 7.466804 CCTTTTATACCTTGGCCTTGGATATA 58.533 38.462 19.10 13.63 0.00 0.86
583 585 6.314917 CCTTTTATACCTTGGCCTTGGATAT 58.685 40.000 19.10 14.37 0.00 1.63
584 586 5.701224 CCTTTTATACCTTGGCCTTGGATA 58.299 41.667 19.10 4.82 0.00 2.59
585 587 4.546674 CCTTTTATACCTTGGCCTTGGAT 58.453 43.478 19.10 5.75 0.00 3.41
586 588 3.880117 GCCTTTTATACCTTGGCCTTGGA 60.880 47.826 19.10 0.00 37.81 3.53
587 589 2.430694 GCCTTTTATACCTTGGCCTTGG 59.569 50.000 3.32 8.82 37.81 3.61
588 590 3.096092 TGCCTTTTATACCTTGGCCTTG 58.904 45.455 3.32 0.00 42.62 3.61
589 591 3.466395 TGCCTTTTATACCTTGGCCTT 57.534 42.857 3.32 0.00 42.62 4.35
590 592 3.299503 CATGCCTTTTATACCTTGGCCT 58.700 45.455 3.32 0.00 42.62 5.19
591 593 2.224042 GCATGCCTTTTATACCTTGGCC 60.224 50.000 6.36 0.00 42.62 5.36
592 594 2.430332 TGCATGCCTTTTATACCTTGGC 59.570 45.455 16.68 0.00 43.49 4.52
593 595 3.446873 TGTGCATGCCTTTTATACCTTGG 59.553 43.478 16.68 0.00 0.00 3.61
594 596 4.717233 TGTGCATGCCTTTTATACCTTG 57.283 40.909 16.68 0.00 0.00 3.61
595 597 5.421693 TCATTGTGCATGCCTTTTATACCTT 59.578 36.000 16.68 0.00 32.13 3.50
596 598 4.955450 TCATTGTGCATGCCTTTTATACCT 59.045 37.500 16.68 0.00 32.13 3.08
597 599 5.261209 TCATTGTGCATGCCTTTTATACC 57.739 39.130 16.68 0.00 32.13 2.73
598 600 8.137437 ACTAATCATTGTGCATGCCTTTTATAC 58.863 33.333 16.68 5.10 32.13 1.47
599 601 8.136800 CACTAATCATTGTGCATGCCTTTTATA 58.863 33.333 16.68 0.00 32.13 0.98
600 602 6.982141 CACTAATCATTGTGCATGCCTTTTAT 59.018 34.615 16.68 0.00 32.13 1.40
601 603 6.331845 CACTAATCATTGTGCATGCCTTTTA 58.668 36.000 16.68 3.14 32.13 1.52
602 604 5.172934 CACTAATCATTGTGCATGCCTTTT 58.827 37.500 16.68 2.09 32.13 2.27
603 605 4.751060 CACTAATCATTGTGCATGCCTTT 58.249 39.130 16.68 1.04 32.13 3.11
604 606 4.380841 CACTAATCATTGTGCATGCCTT 57.619 40.909 16.68 0.00 32.13 4.35
612 614 9.955208 ATGTATTTGTATGCACTAATCATTGTG 57.045 29.630 0.00 0.00 33.16 3.33
635 637 9.551734 ACGAACCTTTTTAGTTTTCTAGTATGT 57.448 29.630 0.00 0.00 33.61 2.29
637 639 8.919661 CGACGAACCTTTTTAGTTTTCTAGTAT 58.080 33.333 0.00 0.00 33.61 2.12
638 640 7.920682 ACGACGAACCTTTTTAGTTTTCTAGTA 59.079 33.333 0.00 0.00 33.61 1.82
639 641 6.758416 ACGACGAACCTTTTTAGTTTTCTAGT 59.242 34.615 0.00 0.00 33.61 2.57
640 642 7.170240 ACGACGAACCTTTTTAGTTTTCTAG 57.830 36.000 0.00 0.00 33.61 2.43
641 643 7.704472 TGTACGACGAACCTTTTTAGTTTTCTA 59.296 33.333 0.00 0.00 0.00 2.10
642 644 6.534793 TGTACGACGAACCTTTTTAGTTTTCT 59.465 34.615 0.00 0.00 0.00 2.52
643 645 6.624917 GTGTACGACGAACCTTTTTAGTTTTC 59.375 38.462 0.00 0.00 0.00 2.29
644 646 6.477742 GTGTACGACGAACCTTTTTAGTTTT 58.522 36.000 0.00 0.00 0.00 2.43
645 647 6.036246 GTGTACGACGAACCTTTTTAGTTT 57.964 37.500 0.00 0.00 0.00 2.66
646 648 5.641777 GTGTACGACGAACCTTTTTAGTT 57.358 39.130 0.00 0.00 0.00 2.24
660 662 3.798337 TCTCAAAAAGTTCCGTGTACGAC 59.202 43.478 5.91 0.00 43.02 4.34
661 663 4.044336 TCTCAAAAAGTTCCGTGTACGA 57.956 40.909 5.91 0.00 43.02 3.43
662 664 4.985044 ATCTCAAAAAGTTCCGTGTACG 57.015 40.909 0.00 0.00 39.44 3.67
663 665 8.080083 TCTAAATCTCAAAAAGTTCCGTGTAC 57.920 34.615 0.00 0.00 0.00 2.90
664 666 8.665643 TTCTAAATCTCAAAAAGTTCCGTGTA 57.334 30.769 0.00 0.00 0.00 2.90
665 667 7.562454 TTCTAAATCTCAAAAAGTTCCGTGT 57.438 32.000 0.00 0.00 0.00 4.49
666 668 8.850454 TTTTCTAAATCTCAAAAAGTTCCGTG 57.150 30.769 0.00 0.00 0.00 4.94
667 669 9.297586 GTTTTTCTAAATCTCAAAAAGTTCCGT 57.702 29.630 0.00 0.00 31.35 4.69
668 670 9.296400 TGTTTTTCTAAATCTCAAAAAGTTCCG 57.704 29.630 0.00 0.00 31.35 4.30
671 673 9.634163 ACGTGTTTTTCTAAATCTCAAAAAGTT 57.366 25.926 0.00 0.00 31.35 2.66
672 674 9.634163 AACGTGTTTTTCTAAATCTCAAAAAGT 57.366 25.926 0.00 0.00 31.35 2.66
720 722 9.744468 GTGAACAATATTTGTAGTTCCAAACTT 57.256 29.630 11.69 0.00 44.59 2.66
721 723 8.908903 TGTGAACAATATTTGTAGTTCCAAACT 58.091 29.630 11.69 0.00 44.59 2.66
722 724 8.964150 GTGTGAACAATATTTGTAGTTCCAAAC 58.036 33.333 11.69 6.32 44.59 2.93
723 725 8.908903 AGTGTGAACAATATTTGTAGTTCCAAA 58.091 29.630 11.69 0.00 44.59 3.28
724 726 8.458573 AGTGTGAACAATATTTGTAGTTCCAA 57.541 30.769 11.69 1.27 44.59 3.53
725 727 8.458573 AAGTGTGAACAATATTTGTAGTTCCA 57.541 30.769 11.69 7.95 44.59 3.53
803 805 4.280929 CGAGAGGGGATTTGAAACCTTTTT 59.719 41.667 0.00 0.00 32.42 1.94
804 806 3.826729 CGAGAGGGGATTTGAAACCTTTT 59.173 43.478 0.00 0.00 32.42 2.27
805 807 3.181433 ACGAGAGGGGATTTGAAACCTTT 60.181 43.478 0.00 0.00 32.42 3.11
806 808 2.375509 ACGAGAGGGGATTTGAAACCTT 59.624 45.455 0.00 0.00 32.42 3.50
807 809 1.985895 ACGAGAGGGGATTTGAAACCT 59.014 47.619 0.00 0.00 35.67 3.50
808 810 2.491675 ACGAGAGGGGATTTGAAACC 57.508 50.000 0.00 0.00 0.00 3.27
809 811 3.939592 CCTAACGAGAGGGGATTTGAAAC 59.060 47.826 0.00 0.00 32.39 2.78
810 812 4.216411 CCTAACGAGAGGGGATTTGAAA 57.784 45.455 0.00 0.00 32.39 2.69
811 813 3.906720 CCTAACGAGAGGGGATTTGAA 57.093 47.619 0.00 0.00 32.39 2.69
914 921 2.167281 CTCACATCCAATCTCGTGGTCT 59.833 50.000 0.00 0.00 39.88 3.85
1125 1177 1.006805 CCATCTGATCGACTCCGGC 60.007 63.158 0.00 0.00 36.24 6.13
1789 1880 1.363744 CTTGATGCTCCTCGTCCAAC 58.636 55.000 0.00 0.00 0.00 3.77
2118 2222 2.865600 AGGCCACTCTGGGTCTCT 59.134 61.111 5.01 0.00 39.03 3.10
2578 2728 5.251932 TGACCAACTCCATAATGTTCCCTAA 59.748 40.000 0.00 0.00 0.00 2.69
2967 3123 3.102204 CCAGCTTCCCCTTGATTTCATT 58.898 45.455 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.