Multiple sequence alignment - TraesCS6B01G238400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G238400 chr6B 100.000 2600 0 0 1 2600 415036687 415034088 0.000000e+00 4802.0
1 TraesCS6B01G238400 chr6B 95.652 46 2 0 1353 1398 624698847 624698892 9.980000e-10 75.0
2 TraesCS6B01G238400 chr6B 93.478 46 3 0 1353 1398 195273270 195273315 4.640000e-08 69.4
3 TraesCS6B01G238400 chr6D 95.141 1379 45 11 782 2147 266954089 266952720 0.000000e+00 2156.0
4 TraesCS6B01G238400 chr6D 87.774 638 33 15 1 622 266955544 266954936 0.000000e+00 704.0
5 TraesCS6B01G238400 chr6D 94.053 454 15 4 2148 2600 458894254 458893812 0.000000e+00 678.0
6 TraesCS6B01G238400 chr6D 88.889 108 7 2 628 735 266954682 266954580 7.550000e-26 128.0
7 TraesCS6B01G238400 chr6A 94.916 1377 42 14 783 2147 379656283 379654923 0.000000e+00 2130.0
8 TraesCS6B01G238400 chr6A 87.755 637 43 14 1 621 379658106 379657489 0.000000e+00 712.0
9 TraesCS6B01G238400 chr6A 89.256 121 8 2 626 746 379656391 379656276 2.090000e-31 147.0
10 TraesCS6B01G238400 chrUn 94.493 454 13 4 2148 2600 222874437 222874879 0.000000e+00 689.0
11 TraesCS6B01G238400 chrUn 94.493 454 13 4 2148 2600 422926967 422926525 0.000000e+00 689.0
12 TraesCS6B01G238400 chrUn 93.833 454 11 7 2148 2600 189427019 189426582 0.000000e+00 667.0
13 TraesCS6B01G238400 chr7D 94.493 454 13 4 2148 2600 382098487 382098929 0.000000e+00 689.0
14 TraesCS6B01G238400 chr3D 94.273 454 14 4 2148 2600 577847110 577847552 0.000000e+00 684.0
15 TraesCS6B01G238400 chr2D 93.833 454 16 4 2148 2600 18016176 18016618 0.000000e+00 673.0
16 TraesCS6B01G238400 chr7B 93.833 454 11 7 2148 2600 716906314 716906751 0.000000e+00 667.0
17 TraesCS6B01G238400 chr5D 93.612 454 17 4 2148 2600 263181391 263180949 0.000000e+00 667.0
18 TraesCS6B01G238400 chr5A 90.741 54 5 0 1345 1398 401505898 401505845 3.590000e-09 73.1
19 TraesCS6B01G238400 chr4D 93.478 46 3 0 1353 1398 358472686 358472641 4.640000e-08 69.4
20 TraesCS6B01G238400 chr1A 93.478 46 3 0 1353 1398 577819031 577819076 4.640000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G238400 chr6B 415034088 415036687 2599 True 4802.000000 4802 100.000000 1 2600 1 chr6B.!!$R1 2599
1 TraesCS6B01G238400 chr6D 266952720 266955544 2824 True 996.000000 2156 90.601333 1 2147 3 chr6D.!!$R2 2146
2 TraesCS6B01G238400 chr6A 379654923 379658106 3183 True 996.333333 2130 90.642333 1 2147 3 chr6A.!!$R1 2146

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
554 568 1.058284 ACCCGTTGCACCCTTTAGTA 58.942 50.0 0.0 0.0 0.0 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2313 3984 0.029567 CCGCTCCTACTAAGACGCTG 59.97 60.0 0.0 0.0 0.0 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
194 195 5.796424 AATTTGAGCAACTCACCAGAAAT 57.204 34.783 0.00 0.00 40.46 2.17
216 219 8.601845 AAATTTGCCAAGTTATAACTGGAAAC 57.398 30.769 25.70 15.02 39.66 2.78
217 220 6.716934 TTTGCCAAGTTATAACTGGAAACA 57.283 33.333 25.70 16.76 39.66 2.83
218 221 5.699097 TGCCAAGTTATAACTGGAAACAC 57.301 39.130 25.70 14.53 39.66 3.32
219 222 4.521256 TGCCAAGTTATAACTGGAAACACC 59.479 41.667 25.70 14.07 39.66 4.16
232 235 4.331968 TGGAAACACCAAGTTATAGCTGG 58.668 43.478 0.00 0.00 46.75 4.85
233 236 4.042311 TGGAAACACCAAGTTATAGCTGGA 59.958 41.667 0.00 0.00 46.75 3.86
234 237 5.007682 GGAAACACCAAGTTATAGCTGGAA 58.992 41.667 0.00 0.00 40.26 3.53
235 238 5.475564 GGAAACACCAAGTTATAGCTGGAAA 59.524 40.000 0.00 0.00 40.26 3.13
277 280 6.115446 AGAAACGATCTCTTTTGCATCCATA 58.885 36.000 0.00 0.00 30.46 2.74
278 281 5.998454 AACGATCTCTTTTGCATCCATAG 57.002 39.130 0.00 0.00 0.00 2.23
279 282 3.812053 ACGATCTCTTTTGCATCCATAGC 59.188 43.478 0.00 0.00 0.00 2.97
280 283 4.063689 CGATCTCTTTTGCATCCATAGCT 58.936 43.478 0.00 0.00 0.00 3.32
281 284 4.083961 CGATCTCTTTTGCATCCATAGCTG 60.084 45.833 0.00 0.00 0.00 4.24
286 289 4.337274 TCTTTTGCATCCATAGCTGATGTG 59.663 41.667 12.60 0.06 41.32 3.21
287 290 3.564053 TTGCATCCATAGCTGATGTGA 57.436 42.857 12.60 5.92 41.32 3.58
294 300 6.669278 CATCCATAGCTGATGTGAGAATTTG 58.331 40.000 0.00 0.00 35.86 2.32
302 308 4.168014 TGATGTGAGAATTTGCGCATTTC 58.832 39.130 12.75 17.70 35.56 2.17
312 322 5.670149 ATTTGCGCATTTCAAATGTTTCA 57.330 30.435 12.75 4.81 41.15 2.69
321 331 9.253275 CGCATTTCAAATGTTTCATGAATTAAC 57.747 29.630 9.40 5.38 33.45 2.01
323 333 9.253275 CATTTCAAATGTTTCATGAATTAACGC 57.747 29.630 9.40 0.00 33.45 4.84
325 335 6.450545 TCAAATGTTTCATGAATTAACGCCA 58.549 32.000 9.40 0.00 0.00 5.69
366 376 5.120363 CAGTAATCAGATTGATGCTCCGATG 59.880 44.000 5.85 0.00 37.15 3.84
367 377 1.875009 TCAGATTGATGCTCCGATGC 58.125 50.000 0.00 0.00 0.00 3.91
432 446 3.848726 TCGTTTCGTATAAGGGGTTCAC 58.151 45.455 0.00 0.00 0.00 3.18
472 486 7.384660 TGTTAATTGATCAACAGAAAATGTGGC 59.615 33.333 11.07 0.00 43.00 5.01
476 490 1.612950 TCAACAGAAAATGTGGCGCAT 59.387 42.857 10.83 7.93 43.00 4.73
477 491 1.722464 CAACAGAAAATGTGGCGCATG 59.278 47.619 15.25 5.64 43.00 4.06
498 512 2.287103 GCCTTATAAAAGCCGGACGAAG 59.713 50.000 5.05 0.00 0.00 3.79
499 513 2.870411 CCTTATAAAAGCCGGACGAAGG 59.130 50.000 5.05 3.39 0.00 3.46
531 545 5.057149 AGTCCATATACAAACGGATTCTGC 58.943 41.667 0.00 0.00 0.00 4.26
538 552 1.597663 CAAACGGATTCTGCGATACCC 59.402 52.381 0.00 0.00 34.49 3.69
554 568 1.058284 ACCCGTTGCACCCTTTAGTA 58.942 50.000 0.00 0.00 0.00 1.82
634 1843 8.474831 TCATGCACATATATGGTAGTATGTACC 58.525 37.037 16.96 0.11 38.98 3.34
683 1892 7.820044 AAGCGTTTGTGTTCTTAAAAATTCA 57.180 28.000 0.00 0.00 0.00 2.57
684 1893 7.449934 AGCGTTTGTGTTCTTAAAAATTCAG 57.550 32.000 0.00 0.00 0.00 3.02
685 1894 7.033185 AGCGTTTGTGTTCTTAAAAATTCAGT 58.967 30.769 0.00 0.00 0.00 3.41
686 1895 7.544217 AGCGTTTGTGTTCTTAAAAATTCAGTT 59.456 29.630 0.00 0.00 0.00 3.16
687 1896 8.800031 GCGTTTGTGTTCTTAAAAATTCAGTTA 58.200 29.630 0.00 0.00 0.00 2.24
735 1944 8.603181 ACAACTTTTCATGCACTATTTGTTTTC 58.397 29.630 0.00 0.00 0.00 2.29
736 1945 7.713764 ACTTTTCATGCACTATTTGTTTTCC 57.286 32.000 0.00 0.00 0.00 3.13
738 1947 5.697473 TTCATGCACTATTTGTTTTCCGA 57.303 34.783 0.00 0.00 0.00 4.55
739 1948 5.295431 TCATGCACTATTTGTTTTCCGAG 57.705 39.130 0.00 0.00 0.00 4.63
740 1949 5.000591 TCATGCACTATTTGTTTTCCGAGA 58.999 37.500 0.00 0.00 0.00 4.04
741 1950 4.742438 TGCACTATTTGTTTTCCGAGAC 57.258 40.909 0.00 0.00 0.00 3.36
742 1951 4.130857 TGCACTATTTGTTTTCCGAGACA 58.869 39.130 0.00 0.00 0.00 3.41
744 1953 4.024387 GCACTATTTGTTTTCCGAGACACA 60.024 41.667 0.00 0.00 0.00 3.72
745 1954 5.334879 GCACTATTTGTTTTCCGAGACACAT 60.335 40.000 0.00 0.00 0.00 3.21
746 1955 6.128391 GCACTATTTGTTTTCCGAGACACATA 60.128 38.462 0.00 0.00 0.00 2.29
747 1956 7.234384 CACTATTTGTTTTCCGAGACACATAC 58.766 38.462 0.00 0.00 0.00 2.39
748 1957 6.932400 ACTATTTGTTTTCCGAGACACATACA 59.068 34.615 0.00 0.00 0.00 2.29
750 1959 6.438259 TTTGTTTTCCGAGACACATACAAA 57.562 33.333 0.00 0.00 33.39 2.83
751 1960 6.438259 TTGTTTTCCGAGACACATACAAAA 57.562 33.333 0.00 0.00 0.00 2.44
752 1961 6.438259 TGTTTTCCGAGACACATACAAAAA 57.562 33.333 0.00 0.00 0.00 1.94
753 1962 7.033530 TGTTTTCCGAGACACATACAAAAAT 57.966 32.000 0.00 0.00 0.00 1.82
754 1963 8.155821 TGTTTTCCGAGACACATACAAAAATA 57.844 30.769 0.00 0.00 0.00 1.40
757 1966 4.327898 TCCGAGACACATACAAAAATACGC 59.672 41.667 0.00 0.00 0.00 4.42
758 1967 4.252902 CGAGACACATACAAAAATACGCG 58.747 43.478 3.53 3.53 0.00 6.01
760 1969 5.600908 AGACACATACAAAAATACGCGTT 57.399 34.783 20.78 1.87 0.00 4.84
761 1970 5.992729 AGACACATACAAAAATACGCGTTT 58.007 33.333 20.78 6.76 0.00 3.60
801 2454 7.964545 AAAAGAGACACATGTTTTTACGAAC 57.035 32.000 0.00 0.00 0.00 3.95
887 2540 2.155197 AACTCTGGCCCATCCAACCC 62.155 60.000 0.00 0.00 46.01 4.11
933 2586 3.301274 CCTAACAAAAACCACCCCTTGA 58.699 45.455 0.00 0.00 0.00 3.02
960 2617 1.211949 AGTCTCTTCCTCTCTCTCCCG 59.788 57.143 0.00 0.00 0.00 5.14
1605 3267 1.967535 CCTGGAGAACTGAGTCGCA 59.032 57.895 0.00 0.00 0.00 5.10
1621 3283 4.191544 AGTCGCAGCTTATCTTTGCAATA 58.808 39.130 0.00 0.00 37.69 1.90
1694 3359 2.323959 GCCGATCAAAAATCAAACGCA 58.676 42.857 0.00 0.00 0.00 5.24
1698 3363 5.331902 CCGATCAAAAATCAAACGCATACT 58.668 37.500 0.00 0.00 0.00 2.12
1750 3415 4.448060 GTGCTACTGTTTGGTTACTCTGTC 59.552 45.833 0.00 0.00 0.00 3.51
1761 3426 3.751698 GGTTACTCTGTCAGCGGATTTTT 59.248 43.478 0.00 0.00 0.00 1.94
1778 3443 7.201435 GCGGATTTTTAAACAAGAATCACCATC 60.201 37.037 10.84 0.00 31.72 3.51
1793 3458 1.428219 CATCGTGTAGCGTCCGTCT 59.572 57.895 0.00 0.00 42.13 4.18
1806 3471 1.669115 CCGTCTGTGTCTGGCTTGG 60.669 63.158 0.00 0.00 0.00 3.61
1829 3494 0.668535 GTTTCAGGTGGTGAACTGCC 59.331 55.000 0.00 0.00 45.23 4.85
1927 3593 7.013655 GGATGTTGTGGATGATAATAGCTTTGT 59.986 37.037 0.00 0.00 0.00 2.83
1944 3610 5.052481 GCTTTGTGCAATCTTCTCCTTTTT 58.948 37.500 0.00 0.00 42.31 1.94
1955 3621 3.878160 TCTCCTTTTTGCGTTTTTGGT 57.122 38.095 0.00 0.00 0.00 3.67
1977 3644 5.470098 GGTGTGAAAAGTAGAGCTTCATTCA 59.530 40.000 0.00 0.00 36.17 2.57
1981 3648 8.077991 TGTGAAAAGTAGAGCTTCATTCATTTG 58.922 33.333 0.00 0.00 36.73 2.32
1986 3653 6.705302 AGTAGAGCTTCATTCATTTGTCAGA 58.295 36.000 0.00 0.00 0.00 3.27
2020 3687 1.276622 GGGAACTCCAGGCTTACTCA 58.723 55.000 0.00 0.00 37.91 3.41
2082 3753 0.393077 ATATTCGCCTCCGGGACAAG 59.607 55.000 0.00 0.00 34.56 3.16
2147 3818 0.035439 TTGGTTCAGGATCGGAAGGC 60.035 55.000 0.00 0.00 0.00 4.35
2148 3819 1.198094 TGGTTCAGGATCGGAAGGCA 61.198 55.000 0.00 0.00 0.00 4.75
2149 3820 0.181350 GGTTCAGGATCGGAAGGCAT 59.819 55.000 0.00 0.00 0.00 4.40
2150 3821 1.408822 GGTTCAGGATCGGAAGGCATT 60.409 52.381 0.00 0.00 0.00 3.56
2151 3822 1.672881 GTTCAGGATCGGAAGGCATTG 59.327 52.381 0.00 0.00 0.00 2.82
2152 3823 1.203237 TCAGGATCGGAAGGCATTGA 58.797 50.000 0.00 0.00 0.00 2.57
2153 3824 1.134401 TCAGGATCGGAAGGCATTGAC 60.134 52.381 0.00 0.00 0.00 3.18
2154 3825 1.134280 CAGGATCGGAAGGCATTGACT 60.134 52.381 0.00 0.00 0.00 3.41
2155 3826 1.561542 AGGATCGGAAGGCATTGACTT 59.438 47.619 3.89 3.89 31.13 3.01
2156 3827 2.771943 AGGATCGGAAGGCATTGACTTA 59.228 45.455 4.32 0.00 26.99 2.24
2157 3828 3.199946 AGGATCGGAAGGCATTGACTTAA 59.800 43.478 4.32 0.00 26.99 1.85
2158 3829 4.137543 GGATCGGAAGGCATTGACTTAAT 58.862 43.478 4.32 0.00 26.99 1.40
2160 3831 3.278574 TCGGAAGGCATTGACTTAATGG 58.721 45.455 4.32 0.00 45.09 3.16
2165 3836 2.945447 GCATTGACTTAATGGCAGCA 57.055 45.000 0.00 0.00 45.09 4.41
2166 3837 2.805845 GCATTGACTTAATGGCAGCAG 58.194 47.619 0.00 0.00 45.09 4.24
2167 3838 2.165030 GCATTGACTTAATGGCAGCAGT 59.835 45.455 0.00 0.00 45.09 4.40
2168 3839 3.733077 GCATTGACTTAATGGCAGCAGTC 60.733 47.826 13.79 13.79 45.09 3.51
2169 3840 3.423539 TTGACTTAATGGCAGCAGTCT 57.576 42.857 18.81 0.00 37.21 3.24
2170 3841 2.703416 TGACTTAATGGCAGCAGTCTG 58.297 47.619 18.81 0.00 43.16 3.51
2171 3842 2.302733 TGACTTAATGGCAGCAGTCTGA 59.697 45.455 18.81 3.43 42.95 3.27
2172 3843 3.054875 TGACTTAATGGCAGCAGTCTGAT 60.055 43.478 18.81 0.00 42.95 2.90
2173 3844 3.539604 ACTTAATGGCAGCAGTCTGATC 58.460 45.455 3.32 0.00 42.95 2.92
2174 3845 2.627515 TAATGGCAGCAGTCTGATCC 57.372 50.000 3.32 1.94 42.95 3.36
2175 3846 0.106819 AATGGCAGCAGTCTGATCCC 60.107 55.000 3.32 0.00 42.95 3.85
2176 3847 0.987081 ATGGCAGCAGTCTGATCCCT 60.987 55.000 3.32 0.00 42.95 4.20
2177 3848 1.203441 TGGCAGCAGTCTGATCCCTT 61.203 55.000 3.32 0.00 42.95 3.95
2178 3849 0.034670 GGCAGCAGTCTGATCCCTTT 60.035 55.000 3.32 0.00 42.95 3.11
2179 3850 1.377536 GCAGCAGTCTGATCCCTTTC 58.622 55.000 3.32 0.00 42.95 2.62
2180 3851 1.065564 GCAGCAGTCTGATCCCTTTCT 60.066 52.381 3.32 0.00 42.95 2.52
2181 3852 2.617532 GCAGCAGTCTGATCCCTTTCTT 60.618 50.000 3.32 0.00 42.95 2.52
2182 3853 3.269178 CAGCAGTCTGATCCCTTTCTTC 58.731 50.000 3.32 0.00 42.95 2.87
2183 3854 2.093764 AGCAGTCTGATCCCTTTCTTCG 60.094 50.000 3.32 0.00 0.00 3.79
2184 3855 2.093973 GCAGTCTGATCCCTTTCTTCGA 60.094 50.000 3.32 0.00 0.00 3.71
2185 3856 3.431486 GCAGTCTGATCCCTTTCTTCGAT 60.431 47.826 3.32 0.00 0.00 3.59
2186 3857 4.202161 GCAGTCTGATCCCTTTCTTCGATA 60.202 45.833 3.32 0.00 0.00 2.92
2187 3858 5.682471 GCAGTCTGATCCCTTTCTTCGATAA 60.682 44.000 3.32 0.00 0.00 1.75
2188 3859 6.341316 CAGTCTGATCCCTTTCTTCGATAAA 58.659 40.000 0.00 0.00 0.00 1.40
2189 3860 6.989169 CAGTCTGATCCCTTTCTTCGATAAAT 59.011 38.462 0.00 0.00 0.00 1.40
2190 3861 6.989169 AGTCTGATCCCTTTCTTCGATAAATG 59.011 38.462 0.00 0.00 0.00 2.32
2191 3862 6.203723 GTCTGATCCCTTTCTTCGATAAATGG 59.796 42.308 8.08 8.08 0.00 3.16
2192 3863 6.099701 TCTGATCCCTTTCTTCGATAAATGGA 59.900 38.462 15.36 15.36 35.81 3.41
2193 3864 6.291377 TGATCCCTTTCTTCGATAAATGGAG 58.709 40.000 16.99 0.00 35.14 3.86
2194 3865 4.451900 TCCCTTTCTTCGATAAATGGAGC 58.548 43.478 11.35 0.00 30.24 4.70
2195 3866 3.565902 CCCTTTCTTCGATAAATGGAGCC 59.434 47.826 11.57 0.00 0.00 4.70
2196 3867 3.248602 CCTTTCTTCGATAAATGGAGCCG 59.751 47.826 6.43 0.00 0.00 5.52
2197 3868 3.536956 TTCTTCGATAAATGGAGCCGT 57.463 42.857 0.00 0.00 0.00 5.68
2198 3869 2.821546 TCTTCGATAAATGGAGCCGTG 58.178 47.619 0.00 0.00 0.00 4.94
2199 3870 2.167693 TCTTCGATAAATGGAGCCGTGT 59.832 45.455 0.00 0.00 0.00 4.49
2200 3871 1.934589 TCGATAAATGGAGCCGTGTG 58.065 50.000 0.00 0.00 0.00 3.82
2201 3872 1.478916 TCGATAAATGGAGCCGTGTGA 59.521 47.619 0.00 0.00 0.00 3.58
2202 3873 1.593006 CGATAAATGGAGCCGTGTGAC 59.407 52.381 0.00 0.00 0.00 3.67
2203 3874 2.627945 GATAAATGGAGCCGTGTGACA 58.372 47.619 0.00 0.00 0.00 3.58
2204 3875 2.093306 TAAATGGAGCCGTGTGACAG 57.907 50.000 0.00 0.00 0.00 3.51
2205 3876 1.237285 AAATGGAGCCGTGTGACAGC 61.237 55.000 0.00 0.00 0.00 4.40
2206 3877 3.939837 ATGGAGCCGTGTGACAGCG 62.940 63.158 0.00 0.00 0.00 5.18
2228 3899 3.642901 CGCAGGTAGTCGCATAGTT 57.357 52.632 0.00 0.00 0.00 2.24
2229 3900 1.922570 CGCAGGTAGTCGCATAGTTT 58.077 50.000 0.00 0.00 0.00 2.66
2230 3901 1.852895 CGCAGGTAGTCGCATAGTTTC 59.147 52.381 0.00 0.00 0.00 2.78
2231 3902 2.734175 CGCAGGTAGTCGCATAGTTTCA 60.734 50.000 0.00 0.00 0.00 2.69
2232 3903 3.458189 GCAGGTAGTCGCATAGTTTCAT 58.542 45.455 0.00 0.00 0.00 2.57
2233 3904 3.871594 GCAGGTAGTCGCATAGTTTCATT 59.128 43.478 0.00 0.00 0.00 2.57
2234 3905 4.025647 GCAGGTAGTCGCATAGTTTCATTC 60.026 45.833 0.00 0.00 0.00 2.67
2235 3906 4.508124 CAGGTAGTCGCATAGTTTCATTCC 59.492 45.833 0.00 0.00 0.00 3.01
2236 3907 3.808174 GGTAGTCGCATAGTTTCATTCCC 59.192 47.826 0.00 0.00 0.00 3.97
2237 3908 3.914426 AGTCGCATAGTTTCATTCCCT 57.086 42.857 0.00 0.00 0.00 4.20
2238 3909 3.535561 AGTCGCATAGTTTCATTCCCTG 58.464 45.455 0.00 0.00 0.00 4.45
2239 3910 2.614057 GTCGCATAGTTTCATTCCCTGG 59.386 50.000 0.00 0.00 0.00 4.45
2240 3911 2.503765 TCGCATAGTTTCATTCCCTGGA 59.496 45.455 0.00 0.00 0.00 3.86
2241 3912 3.136443 TCGCATAGTTTCATTCCCTGGAT 59.864 43.478 0.00 0.00 0.00 3.41
2242 3913 3.251729 CGCATAGTTTCATTCCCTGGATG 59.748 47.826 0.00 0.00 0.00 3.51
2243 3914 3.571401 GCATAGTTTCATTCCCTGGATGG 59.429 47.826 0.00 0.00 0.00 3.51
2244 3915 2.149973 AGTTTCATTCCCTGGATGGC 57.850 50.000 0.00 0.00 0.00 4.40
2245 3916 1.642762 AGTTTCATTCCCTGGATGGCT 59.357 47.619 0.00 0.00 0.00 4.75
2246 3917 2.852449 AGTTTCATTCCCTGGATGGCTA 59.148 45.455 0.00 0.00 0.00 3.93
2247 3918 3.269381 AGTTTCATTCCCTGGATGGCTAA 59.731 43.478 0.00 0.00 0.00 3.09
2248 3919 4.078980 AGTTTCATTCCCTGGATGGCTAAT 60.079 41.667 0.00 0.00 0.00 1.73
2249 3920 3.513909 TCATTCCCTGGATGGCTAATG 57.486 47.619 0.00 0.00 38.22 1.90
2250 3921 1.891150 CATTCCCTGGATGGCTAATGC 59.109 52.381 0.00 0.00 33.75 3.56
2251 3922 1.225373 TTCCCTGGATGGCTAATGCT 58.775 50.000 0.00 0.00 39.59 3.79
2252 3923 1.225373 TCCCTGGATGGCTAATGCTT 58.775 50.000 0.00 0.00 39.59 3.91
2253 3924 2.417652 TCCCTGGATGGCTAATGCTTA 58.582 47.619 0.00 0.00 39.59 3.09
2254 3925 2.782925 TCCCTGGATGGCTAATGCTTAA 59.217 45.455 0.00 0.00 39.59 1.85
2255 3926 2.887152 CCCTGGATGGCTAATGCTTAAC 59.113 50.000 0.00 0.00 39.59 2.01
2256 3927 3.554934 CCTGGATGGCTAATGCTTAACA 58.445 45.455 0.00 0.00 39.59 2.41
2257 3928 3.316308 CCTGGATGGCTAATGCTTAACAC 59.684 47.826 0.00 0.00 39.59 3.32
2258 3929 4.202441 CTGGATGGCTAATGCTTAACACT 58.798 43.478 0.00 0.00 39.59 3.55
2259 3930 3.947196 TGGATGGCTAATGCTTAACACTG 59.053 43.478 0.00 0.00 39.59 3.66
2260 3931 3.316308 GGATGGCTAATGCTTAACACTGG 59.684 47.826 0.00 0.00 39.59 4.00
2261 3932 3.433306 TGGCTAATGCTTAACACTGGT 57.567 42.857 0.00 0.00 39.59 4.00
2262 3933 3.343617 TGGCTAATGCTTAACACTGGTC 58.656 45.455 0.00 0.00 39.59 4.02
2263 3934 3.244735 TGGCTAATGCTTAACACTGGTCA 60.245 43.478 0.00 0.00 39.59 4.02
2264 3935 3.375299 GGCTAATGCTTAACACTGGTCAG 59.625 47.826 0.00 0.00 39.59 3.51
2265 3936 4.253685 GCTAATGCTTAACACTGGTCAGA 58.746 43.478 4.84 0.00 36.03 3.27
2266 3937 4.878397 GCTAATGCTTAACACTGGTCAGAT 59.122 41.667 4.84 0.00 36.03 2.90
2267 3938 6.049149 GCTAATGCTTAACACTGGTCAGATA 58.951 40.000 4.84 0.00 36.03 1.98
2268 3939 6.018669 GCTAATGCTTAACACTGGTCAGATAC 60.019 42.308 4.84 0.00 36.03 2.24
2269 3940 8.847644 GCTAATGCTTAACACTGGTCAGATACC 61.848 44.444 4.84 0.00 41.68 2.73
2285 3956 8.749841 GTCAGATACCATAAGTTATGCTAGTG 57.250 38.462 16.17 9.57 34.85 2.74
2286 3957 7.329717 GTCAGATACCATAAGTTATGCTAGTGC 59.670 40.741 16.17 7.14 40.20 4.40
2287 3958 7.233553 TCAGATACCATAAGTTATGCTAGTGCT 59.766 37.037 16.17 8.82 40.48 4.40
2288 3959 7.543868 CAGATACCATAAGTTATGCTAGTGCTC 59.456 40.741 16.17 10.40 40.48 4.26
2289 3960 4.621991 ACCATAAGTTATGCTAGTGCTCG 58.378 43.478 16.17 3.52 40.48 5.03
2290 3961 3.430218 CCATAAGTTATGCTAGTGCTCGC 59.570 47.826 16.17 0.00 40.48 5.03
2291 3962 2.969628 AAGTTATGCTAGTGCTCGCT 57.030 45.000 0.00 0.00 40.48 4.93
2292 3963 2.500509 AGTTATGCTAGTGCTCGCTC 57.499 50.000 0.00 0.00 40.48 5.03
2293 3964 1.124462 GTTATGCTAGTGCTCGCTCG 58.876 55.000 0.00 0.00 40.48 5.03
2294 3965 0.030773 TTATGCTAGTGCTCGCTCGG 59.969 55.000 0.00 0.00 40.48 4.63
2295 3966 2.407846 TATGCTAGTGCTCGCTCGGC 62.408 60.000 0.00 0.00 40.48 5.54
2296 3967 4.498520 GCTAGTGCTCGCTCGGCA 62.499 66.667 0.00 2.27 37.36 5.69
2297 3968 2.181777 CTAGTGCTCGCTCGGCAA 59.818 61.111 6.93 0.00 41.54 4.52
2298 3969 1.446099 CTAGTGCTCGCTCGGCAAA 60.446 57.895 6.93 0.35 41.54 3.68
2299 3970 0.807667 CTAGTGCTCGCTCGGCAAAT 60.808 55.000 6.93 3.33 41.54 2.32
2300 3971 0.391130 TAGTGCTCGCTCGGCAAATT 60.391 50.000 6.93 1.27 41.54 1.82
2301 3972 1.226128 GTGCTCGCTCGGCAAATTC 60.226 57.895 6.93 0.00 41.54 2.17
2302 3973 1.375908 TGCTCGCTCGGCAAATTCT 60.376 52.632 3.63 0.00 36.71 2.40
2303 3974 0.108377 TGCTCGCTCGGCAAATTCTA 60.108 50.000 3.63 0.00 36.71 2.10
2304 3975 1.221414 GCTCGCTCGGCAAATTCTAT 58.779 50.000 0.00 0.00 0.00 1.98
2305 3976 1.193426 GCTCGCTCGGCAAATTCTATC 59.807 52.381 0.00 0.00 0.00 2.08
2306 3977 1.453524 CTCGCTCGGCAAATTCTATCG 59.546 52.381 0.00 0.00 0.00 2.92
2307 3978 0.508641 CGCTCGGCAAATTCTATCGG 59.491 55.000 0.00 0.00 0.00 4.18
2308 3979 1.583054 GCTCGGCAAATTCTATCGGT 58.417 50.000 0.00 0.00 0.00 4.69
2309 3980 1.940613 GCTCGGCAAATTCTATCGGTT 59.059 47.619 0.00 0.00 0.00 4.44
2310 3981 2.032808 GCTCGGCAAATTCTATCGGTTC 60.033 50.000 0.00 0.00 0.00 3.62
2311 3982 3.194861 CTCGGCAAATTCTATCGGTTCA 58.805 45.455 0.00 0.00 0.00 3.18
2312 3983 3.194861 TCGGCAAATTCTATCGGTTCAG 58.805 45.455 0.00 0.00 0.00 3.02
2313 3984 2.286418 CGGCAAATTCTATCGGTTCAGC 60.286 50.000 0.00 0.00 0.00 4.26
2314 3985 2.682856 GGCAAATTCTATCGGTTCAGCA 59.317 45.455 0.00 0.00 0.00 4.41
2315 3986 3.242870 GGCAAATTCTATCGGTTCAGCAG 60.243 47.826 0.00 0.00 0.00 4.24
2316 3987 3.790123 GCAAATTCTATCGGTTCAGCAGC 60.790 47.826 0.00 0.00 0.00 5.25
2318 3989 0.530744 TTCTATCGGTTCAGCAGCGT 59.469 50.000 0.00 0.00 46.86 5.07
2319 3990 0.100682 TCTATCGGTTCAGCAGCGTC 59.899 55.000 0.00 0.00 46.86 5.19
2320 3991 0.101399 CTATCGGTTCAGCAGCGTCT 59.899 55.000 0.00 0.00 46.86 4.18
2321 3992 0.530744 TATCGGTTCAGCAGCGTCTT 59.469 50.000 0.00 0.00 46.86 3.01
2322 3993 0.530744 ATCGGTTCAGCAGCGTCTTA 59.469 50.000 0.00 0.00 46.86 2.10
2323 3994 0.109272 TCGGTTCAGCAGCGTCTTAG 60.109 55.000 0.00 0.00 46.86 2.18
2324 3995 0.388649 CGGTTCAGCAGCGTCTTAGT 60.389 55.000 0.00 0.00 41.69 2.24
2325 3996 1.135489 CGGTTCAGCAGCGTCTTAGTA 60.135 52.381 0.00 0.00 41.69 1.82
2326 3997 2.531206 GGTTCAGCAGCGTCTTAGTAG 58.469 52.381 0.00 0.00 0.00 2.57
2327 3998 2.531206 GTTCAGCAGCGTCTTAGTAGG 58.469 52.381 0.00 0.00 0.00 3.18
2328 3999 2.124277 TCAGCAGCGTCTTAGTAGGA 57.876 50.000 0.00 0.00 0.00 2.94
2329 4000 2.017782 TCAGCAGCGTCTTAGTAGGAG 58.982 52.381 0.00 0.00 0.00 3.69
2330 4001 0.741915 AGCAGCGTCTTAGTAGGAGC 59.258 55.000 0.00 0.00 0.00 4.70
2331 4002 0.592754 GCAGCGTCTTAGTAGGAGCG 60.593 60.000 0.00 0.00 32.22 5.03
2332 4003 0.029567 CAGCGTCTTAGTAGGAGCGG 59.970 60.000 6.46 0.43 32.22 5.52
2333 4004 0.107312 AGCGTCTTAGTAGGAGCGGA 60.107 55.000 6.46 0.00 32.22 5.54
2334 4005 0.737219 GCGTCTTAGTAGGAGCGGAA 59.263 55.000 6.46 0.00 0.00 4.30
2335 4006 1.268640 GCGTCTTAGTAGGAGCGGAAG 60.269 57.143 6.46 0.00 0.00 3.46
2336 4007 1.334243 CGTCTTAGTAGGAGCGGAAGG 59.666 57.143 0.00 0.00 0.00 3.46
2337 4008 1.682323 GTCTTAGTAGGAGCGGAAGGG 59.318 57.143 0.00 0.00 0.00 3.95
2338 4009 1.567649 TCTTAGTAGGAGCGGAAGGGA 59.432 52.381 0.00 0.00 0.00 4.20
2339 4010 2.177233 TCTTAGTAGGAGCGGAAGGGAT 59.823 50.000 0.00 0.00 0.00 3.85
2340 4011 1.996798 TAGTAGGAGCGGAAGGGATG 58.003 55.000 0.00 0.00 0.00 3.51
2341 4012 0.032017 AGTAGGAGCGGAAGGGATGT 60.032 55.000 0.00 0.00 0.00 3.06
2342 4013 1.217183 AGTAGGAGCGGAAGGGATGTA 59.783 52.381 0.00 0.00 0.00 2.29
2343 4014 2.037144 GTAGGAGCGGAAGGGATGTAA 58.963 52.381 0.00 0.00 0.00 2.41
2344 4015 0.831307 AGGAGCGGAAGGGATGTAAC 59.169 55.000 0.00 0.00 0.00 2.50
2345 4016 0.539986 GGAGCGGAAGGGATGTAACA 59.460 55.000 0.00 0.00 0.00 2.41
2346 4017 1.065709 GGAGCGGAAGGGATGTAACAA 60.066 52.381 0.00 0.00 0.00 2.83
2347 4018 2.280628 GAGCGGAAGGGATGTAACAAG 58.719 52.381 0.00 0.00 0.00 3.16
2348 4019 1.065418 AGCGGAAGGGATGTAACAAGG 60.065 52.381 0.00 0.00 0.00 3.61
2349 4020 1.065709 GCGGAAGGGATGTAACAAGGA 60.066 52.381 0.00 0.00 0.00 3.36
2350 4021 2.906354 CGGAAGGGATGTAACAAGGAG 58.094 52.381 0.00 0.00 0.00 3.69
2351 4022 2.644676 GGAAGGGATGTAACAAGGAGC 58.355 52.381 0.00 0.00 0.00 4.70
2352 4023 2.026262 GGAAGGGATGTAACAAGGAGCA 60.026 50.000 0.00 0.00 0.00 4.26
2353 4024 3.274288 GAAGGGATGTAACAAGGAGCAG 58.726 50.000 0.00 0.00 0.00 4.24
2354 4025 2.551270 AGGGATGTAACAAGGAGCAGA 58.449 47.619 0.00 0.00 0.00 4.26
2355 4026 2.912956 AGGGATGTAACAAGGAGCAGAA 59.087 45.455 0.00 0.00 0.00 3.02
2356 4027 3.330701 AGGGATGTAACAAGGAGCAGAAA 59.669 43.478 0.00 0.00 0.00 2.52
2357 4028 3.440522 GGGATGTAACAAGGAGCAGAAAC 59.559 47.826 0.00 0.00 0.00 2.78
2358 4029 3.440522 GGATGTAACAAGGAGCAGAAACC 59.559 47.826 0.00 0.00 0.00 3.27
2359 4030 3.857157 TGTAACAAGGAGCAGAAACCT 57.143 42.857 0.00 0.00 38.23 3.50
2360 4031 4.967084 TGTAACAAGGAGCAGAAACCTA 57.033 40.909 0.00 0.00 35.25 3.08
2361 4032 4.638304 TGTAACAAGGAGCAGAAACCTAC 58.362 43.478 0.00 0.00 35.25 3.18
2362 4033 2.861147 ACAAGGAGCAGAAACCTACC 57.139 50.000 0.00 0.00 35.25 3.18
2363 4034 1.002087 ACAAGGAGCAGAAACCTACCG 59.998 52.381 0.00 0.00 35.25 4.02
2364 4035 1.002087 CAAGGAGCAGAAACCTACCGT 59.998 52.381 0.00 0.00 35.25 4.83
2365 4036 1.349067 AGGAGCAGAAACCTACCGTT 58.651 50.000 0.00 0.00 34.47 4.44
2366 4037 2.532843 AGGAGCAGAAACCTACCGTTA 58.467 47.619 0.00 0.00 34.47 3.18
2367 4038 2.901839 AGGAGCAGAAACCTACCGTTAA 59.098 45.455 0.00 0.00 34.47 2.01
2368 4039 3.056035 AGGAGCAGAAACCTACCGTTAAG 60.056 47.826 0.00 0.00 34.47 1.85
2369 4040 7.540534 AAGGAGCAGAAACCTACCGTTAAGG 62.541 48.000 0.00 0.00 39.92 2.69
2370 4041 2.901839 AGCAGAAACCTACCGTTAAGGA 59.098 45.455 0.00 0.00 45.00 3.36
2371 4042 3.325716 AGCAGAAACCTACCGTTAAGGAA 59.674 43.478 0.00 0.00 45.00 3.36
2372 4043 3.434641 GCAGAAACCTACCGTTAAGGAAC 59.565 47.826 0.00 0.00 45.00 3.62
2373 4044 3.999001 CAGAAACCTACCGTTAAGGAACC 59.001 47.826 0.00 0.00 45.00 3.62
2374 4045 3.906218 AGAAACCTACCGTTAAGGAACCT 59.094 43.478 0.00 0.00 45.00 3.50
2375 4046 4.349048 AGAAACCTACCGTTAAGGAACCTT 59.651 41.667 10.97 10.97 45.00 3.50
2376 4047 3.690475 ACCTACCGTTAAGGAACCTTG 57.310 47.619 15.37 2.30 45.00 3.61
2377 4048 2.303890 ACCTACCGTTAAGGAACCTTGG 59.696 50.000 15.37 10.73 45.00 3.61
2378 4049 2.568509 CCTACCGTTAAGGAACCTTGGA 59.431 50.000 15.37 2.49 45.00 3.53
2379 4050 3.008266 CCTACCGTTAAGGAACCTTGGAA 59.992 47.826 15.37 1.05 45.00 3.53
2380 4051 3.581265 ACCGTTAAGGAACCTTGGAAA 57.419 42.857 15.37 0.37 45.00 3.13
2381 4052 3.900971 ACCGTTAAGGAACCTTGGAAAA 58.099 40.909 15.37 0.04 45.00 2.29
2382 4053 4.279982 ACCGTTAAGGAACCTTGGAAAAA 58.720 39.130 15.37 0.00 45.00 1.94
2383 4054 4.340097 ACCGTTAAGGAACCTTGGAAAAAG 59.660 41.667 15.37 4.98 45.00 2.27
2384 4055 4.295870 CGTTAAGGAACCTTGGAAAAAGC 58.704 43.478 15.37 0.00 37.47 3.51
2385 4056 4.628074 GTTAAGGAACCTTGGAAAAAGCC 58.372 43.478 15.37 0.00 37.47 4.35
2386 4057 1.328279 AGGAACCTTGGAAAAAGCCG 58.672 50.000 0.00 0.00 0.00 5.52
2387 4058 1.133606 AGGAACCTTGGAAAAAGCCGA 60.134 47.619 0.00 0.00 0.00 5.54
2388 4059 1.684450 GGAACCTTGGAAAAAGCCGAA 59.316 47.619 0.00 0.00 0.00 4.30
2389 4060 2.101750 GGAACCTTGGAAAAAGCCGAAA 59.898 45.455 0.00 0.00 0.00 3.46
2390 4061 2.882927 ACCTTGGAAAAAGCCGAAAC 57.117 45.000 0.00 0.00 0.00 2.78
2391 4062 1.411246 ACCTTGGAAAAAGCCGAAACC 59.589 47.619 0.00 0.00 0.00 3.27
2392 4063 1.686587 CCTTGGAAAAAGCCGAAACCT 59.313 47.619 0.00 0.00 0.00 3.50
2393 4064 2.888414 CCTTGGAAAAAGCCGAAACCTA 59.112 45.455 0.00 0.00 0.00 3.08
2394 4065 3.057526 CCTTGGAAAAAGCCGAAACCTAG 60.058 47.826 0.00 0.00 0.00 3.02
2395 4066 2.510613 TGGAAAAAGCCGAAACCTAGG 58.489 47.619 7.41 7.41 0.00 3.02
2396 4067 1.816835 GGAAAAAGCCGAAACCTAGGG 59.183 52.381 14.81 0.00 0.00 3.53
2397 4068 2.511659 GAAAAAGCCGAAACCTAGGGT 58.488 47.619 14.81 2.44 40.36 4.34
2398 4069 3.559811 GGAAAAAGCCGAAACCTAGGGTA 60.560 47.826 14.81 0.00 37.24 3.69
2399 4070 4.267536 GAAAAAGCCGAAACCTAGGGTAT 58.732 43.478 14.81 0.00 37.24 2.73
2400 4071 4.311520 AAAAGCCGAAACCTAGGGTATT 57.688 40.909 14.81 5.02 37.24 1.89
2401 4072 3.555527 AAGCCGAAACCTAGGGTATTC 57.444 47.619 14.81 13.07 37.24 1.75
2402 4073 1.767088 AGCCGAAACCTAGGGTATTCC 59.233 52.381 14.81 3.56 36.34 3.01
2417 4088 5.815233 GGTATTCCCTGATCAGATCTGAA 57.185 43.478 28.40 18.60 43.58 3.02
2418 4089 5.546526 GGTATTCCCTGATCAGATCTGAAC 58.453 45.833 28.40 25.19 43.58 3.18
2419 4090 5.306678 GGTATTCCCTGATCAGATCTGAACT 59.693 44.000 28.40 13.99 43.58 3.01
2420 4091 5.972327 ATTCCCTGATCAGATCTGAACTT 57.028 39.130 28.40 13.21 43.58 2.66
2421 4092 5.350504 TTCCCTGATCAGATCTGAACTTC 57.649 43.478 28.40 21.02 43.58 3.01
2422 4093 4.356436 TCCCTGATCAGATCTGAACTTCA 58.644 43.478 28.40 24.03 43.58 3.02
2423 4094 4.779489 TCCCTGATCAGATCTGAACTTCAA 59.221 41.667 28.40 10.78 43.58 2.69
2424 4095 5.249163 TCCCTGATCAGATCTGAACTTCAAA 59.751 40.000 28.40 12.90 43.58 2.69
2425 4096 6.069789 TCCCTGATCAGATCTGAACTTCAAAT 60.070 38.462 28.40 10.14 43.58 2.32
2426 4097 7.126268 TCCCTGATCAGATCTGAACTTCAAATA 59.874 37.037 28.40 12.30 43.58 1.40
2427 4098 7.772292 CCCTGATCAGATCTGAACTTCAAATAA 59.228 37.037 28.40 7.27 43.58 1.40
2428 4099 8.610896 CCTGATCAGATCTGAACTTCAAATAAC 58.389 37.037 28.40 2.11 43.58 1.89
2429 4100 9.159364 CTGATCAGATCTGAACTTCAAATAACA 57.841 33.333 28.40 6.52 43.58 2.41
2430 4101 9.506018 TGATCAGATCTGAACTTCAAATAACAA 57.494 29.630 28.40 3.58 43.58 2.83
2431 4102 9.766277 GATCAGATCTGAACTTCAAATAACAAC 57.234 33.333 28.40 0.00 43.58 3.32
2432 4103 8.099364 TCAGATCTGAACTTCAAATAACAACC 57.901 34.615 23.17 0.00 36.53 3.77
2433 4104 7.719193 TCAGATCTGAACTTCAAATAACAACCA 59.281 33.333 23.17 0.00 36.53 3.67
2434 4105 8.517878 CAGATCTGAACTTCAAATAACAACCAT 58.482 33.333 18.34 0.00 0.00 3.55
2435 4106 9.082313 AGATCTGAACTTCAAATAACAACCATT 57.918 29.630 0.00 0.00 0.00 3.16
2436 4107 9.132521 GATCTGAACTTCAAATAACAACCATTG 57.867 33.333 0.00 0.00 0.00 2.82
2437 4108 6.922957 TCTGAACTTCAAATAACAACCATTGC 59.077 34.615 0.00 0.00 0.00 3.56
2438 4109 5.988561 TGAACTTCAAATAACAACCATTGCC 59.011 36.000 0.00 0.00 0.00 4.52
2439 4110 5.806654 ACTTCAAATAACAACCATTGCCT 57.193 34.783 0.00 0.00 0.00 4.75
2440 4111 6.173427 ACTTCAAATAACAACCATTGCCTT 57.827 33.333 0.00 0.00 0.00 4.35
2441 4112 7.296628 ACTTCAAATAACAACCATTGCCTTA 57.703 32.000 0.00 0.00 0.00 2.69
2442 4113 7.151976 ACTTCAAATAACAACCATTGCCTTAC 58.848 34.615 0.00 0.00 0.00 2.34
2443 4114 5.704888 TCAAATAACAACCATTGCCTTACG 58.295 37.500 0.00 0.00 0.00 3.18
2444 4115 5.241949 TCAAATAACAACCATTGCCTTACGT 59.758 36.000 0.00 0.00 0.00 3.57
2445 4116 6.430308 TCAAATAACAACCATTGCCTTACGTA 59.570 34.615 0.00 0.00 0.00 3.57
2446 4117 5.806366 ATAACAACCATTGCCTTACGTAC 57.194 39.130 0.00 0.00 0.00 3.67
2447 4118 2.429478 ACAACCATTGCCTTACGTACC 58.571 47.619 0.00 0.00 0.00 3.34
2448 4119 2.224572 ACAACCATTGCCTTACGTACCA 60.225 45.455 0.00 0.00 0.00 3.25
2449 4120 3.013921 CAACCATTGCCTTACGTACCAT 58.986 45.455 0.00 0.00 0.00 3.55
2450 4121 3.359695 ACCATTGCCTTACGTACCATT 57.640 42.857 0.00 0.00 0.00 3.16
2451 4122 3.013921 ACCATTGCCTTACGTACCATTG 58.986 45.455 0.00 0.56 0.00 2.82
2452 4123 2.357637 CCATTGCCTTACGTACCATTGG 59.642 50.000 0.00 0.00 0.00 3.16
2453 4124 1.455248 TTGCCTTACGTACCATTGGC 58.545 50.000 1.54 12.74 40.62 4.52
2454 4125 0.616371 TGCCTTACGTACCATTGGCT 59.384 50.000 17.50 0.00 40.82 4.75
2455 4126 1.014352 GCCTTACGTACCATTGGCTG 58.986 55.000 1.54 0.00 37.58 4.85
2464 4135 3.379617 CCATTGGCTGGGAAAGGAA 57.620 52.632 0.00 0.00 41.82 3.36
2465 4136 1.188863 CCATTGGCTGGGAAAGGAAG 58.811 55.000 0.00 0.00 41.82 3.46
2466 4137 1.188863 CATTGGCTGGGAAAGGAAGG 58.811 55.000 0.00 0.00 0.00 3.46
2467 4138 0.786435 ATTGGCTGGGAAAGGAAGGT 59.214 50.000 0.00 0.00 0.00 3.50
2468 4139 0.178964 TTGGCTGGGAAAGGAAGGTG 60.179 55.000 0.00 0.00 0.00 4.00
2469 4140 1.979155 GGCTGGGAAAGGAAGGTGC 60.979 63.158 0.00 0.00 0.00 5.01
2470 4141 1.979155 GCTGGGAAAGGAAGGTGCC 60.979 63.158 0.00 0.00 0.00 5.01
2471 4142 1.675641 CTGGGAAAGGAAGGTGCCG 60.676 63.158 0.00 0.00 0.00 5.69
2472 4143 2.411765 CTGGGAAAGGAAGGTGCCGT 62.412 60.000 0.00 0.00 0.00 5.68
2473 4144 1.228459 GGGAAAGGAAGGTGCCGTT 60.228 57.895 0.00 0.00 32.18 4.44
2474 4145 0.826256 GGGAAAGGAAGGTGCCGTTT 60.826 55.000 0.00 0.00 29.58 3.60
2475 4146 0.313987 GGAAAGGAAGGTGCCGTTTG 59.686 55.000 0.00 0.00 29.58 2.93
2476 4147 0.318699 GAAAGGAAGGTGCCGTTTGC 60.319 55.000 0.00 0.00 41.77 3.68
2477 4148 1.744320 AAAGGAAGGTGCCGTTTGCC 61.744 55.000 0.00 0.00 40.16 4.52
2478 4149 4.038080 GGAAGGTGCCGTTTGCCG 62.038 66.667 0.00 0.00 40.16 5.69
2479 4150 4.700365 GAAGGTGCCGTTTGCCGC 62.700 66.667 0.00 0.00 40.16 6.53
2482 4153 4.999939 GGTGCCGTTTGCCGCAAG 63.000 66.667 5.83 0.00 40.16 4.01
2483 4154 4.264638 GTGCCGTTTGCCGCAAGT 62.265 61.111 5.83 0.00 40.16 3.16
2484 4155 2.592001 TGCCGTTTGCCGCAAGTA 60.592 55.556 5.83 0.00 40.16 2.24
2485 4156 2.175811 GCCGTTTGCCGCAAGTAG 59.824 61.111 5.83 2.14 34.38 2.57
2486 4157 2.322081 GCCGTTTGCCGCAAGTAGA 61.322 57.895 5.83 0.00 34.38 2.59
2487 4158 1.644786 GCCGTTTGCCGCAAGTAGAT 61.645 55.000 5.83 0.00 34.38 1.98
2488 4159 0.373716 CCGTTTGCCGCAAGTAGATC 59.626 55.000 5.83 0.00 34.38 2.75
2489 4160 1.359848 CGTTTGCCGCAAGTAGATCT 58.640 50.000 5.83 0.00 0.00 2.75
2490 4161 2.536365 CGTTTGCCGCAAGTAGATCTA 58.464 47.619 5.83 0.00 0.00 1.98
2491 4162 2.535984 CGTTTGCCGCAAGTAGATCTAG 59.464 50.000 1.64 0.00 0.00 2.43
2492 4163 2.225068 TTGCCGCAAGTAGATCTAGC 57.775 50.000 1.64 2.47 0.00 3.42
2493 4164 1.403814 TGCCGCAAGTAGATCTAGCT 58.596 50.000 1.64 0.99 0.00 3.32
2494 4165 1.067669 TGCCGCAAGTAGATCTAGCTG 59.932 52.381 1.64 4.75 0.00 4.24
2495 4166 1.338337 GCCGCAAGTAGATCTAGCTGA 59.662 52.381 1.64 0.00 0.00 4.26
2496 4167 2.029470 GCCGCAAGTAGATCTAGCTGAT 60.029 50.000 1.64 0.00 38.27 2.90
2497 4168 3.553922 GCCGCAAGTAGATCTAGCTGATT 60.554 47.826 1.64 0.00 35.14 2.57
2498 4169 3.986572 CCGCAAGTAGATCTAGCTGATTG 59.013 47.826 1.64 5.20 35.14 2.67
2499 4170 4.261783 CCGCAAGTAGATCTAGCTGATTGA 60.262 45.833 1.64 0.00 35.14 2.57
2500 4171 4.679197 CGCAAGTAGATCTAGCTGATTGAC 59.321 45.833 1.64 0.66 35.14 3.18
2501 4172 5.507149 CGCAAGTAGATCTAGCTGATTGACT 60.507 44.000 1.64 2.85 35.14 3.41
2502 4173 5.920273 GCAAGTAGATCTAGCTGATTGACTC 59.080 44.000 1.64 0.00 35.14 3.36
2503 4174 5.940192 AGTAGATCTAGCTGATTGACTCG 57.060 43.478 1.64 0.00 35.14 4.18
2504 4175 5.373222 AGTAGATCTAGCTGATTGACTCGT 58.627 41.667 1.64 0.00 35.14 4.18
2505 4176 5.825679 AGTAGATCTAGCTGATTGACTCGTT 59.174 40.000 1.64 0.00 35.14 3.85
2506 4177 5.181690 AGATCTAGCTGATTGACTCGTTC 57.818 43.478 0.00 0.00 35.14 3.95
2507 4178 4.642437 AGATCTAGCTGATTGACTCGTTCA 59.358 41.667 0.00 0.00 35.14 3.18
2508 4179 4.991153 TCTAGCTGATTGACTCGTTCAT 57.009 40.909 0.00 0.00 32.84 2.57
2509 4180 6.488344 AGATCTAGCTGATTGACTCGTTCATA 59.512 38.462 0.00 0.00 35.14 2.15
2510 4181 6.066054 TCTAGCTGATTGACTCGTTCATAG 57.934 41.667 0.00 0.00 32.84 2.23
2511 4182 4.727507 AGCTGATTGACTCGTTCATAGT 57.272 40.909 0.00 0.00 32.84 2.12
2512 4183 4.677584 AGCTGATTGACTCGTTCATAGTC 58.322 43.478 0.00 0.00 43.04 2.59
2513 4184 3.483922 GCTGATTGACTCGTTCATAGTCG 59.516 47.826 0.00 0.00 45.19 4.18
2514 4185 4.730903 GCTGATTGACTCGTTCATAGTCGA 60.731 45.833 0.00 0.00 45.19 4.20
2515 4186 5.305139 TGATTGACTCGTTCATAGTCGAA 57.695 39.130 0.00 0.00 45.19 3.71
2516 4187 5.705902 TGATTGACTCGTTCATAGTCGAAA 58.294 37.500 0.00 0.00 45.19 3.46
2517 4188 5.571741 TGATTGACTCGTTCATAGTCGAAAC 59.428 40.000 0.00 0.00 45.19 2.78
2518 4189 3.829948 TGACTCGTTCATAGTCGAAACC 58.170 45.455 0.00 0.00 45.19 3.27
2519 4190 3.504906 TGACTCGTTCATAGTCGAAACCT 59.495 43.478 0.00 0.00 45.19 3.50
2520 4191 4.696877 TGACTCGTTCATAGTCGAAACCTA 59.303 41.667 0.00 0.00 45.19 3.08
2521 4192 5.181811 TGACTCGTTCATAGTCGAAACCTAA 59.818 40.000 0.00 0.00 45.19 2.69
2522 4193 6.127814 TGACTCGTTCATAGTCGAAACCTAAT 60.128 38.462 0.00 0.00 45.19 1.73
2523 4194 6.034591 ACTCGTTCATAGTCGAAACCTAATG 58.965 40.000 0.00 0.00 35.69 1.90
2524 4195 4.802039 TCGTTCATAGTCGAAACCTAATGC 59.198 41.667 0.00 0.00 33.13 3.56
2525 4196 4.565166 CGTTCATAGTCGAAACCTAATGCA 59.435 41.667 0.00 0.00 0.00 3.96
2526 4197 5.234329 CGTTCATAGTCGAAACCTAATGCAT 59.766 40.000 0.00 0.00 0.00 3.96
2527 4198 6.562270 CGTTCATAGTCGAAACCTAATGCATC 60.562 42.308 0.00 0.00 0.00 3.91
2528 4199 4.982295 TCATAGTCGAAACCTAATGCATCG 59.018 41.667 0.00 0.00 34.98 3.84
2529 4200 3.520290 AGTCGAAACCTAATGCATCGA 57.480 42.857 0.00 0.00 39.91 3.59
2530 4201 3.857052 AGTCGAAACCTAATGCATCGAA 58.143 40.909 7.80 0.00 43.24 3.71
2531 4202 3.617263 AGTCGAAACCTAATGCATCGAAC 59.383 43.478 7.80 3.78 43.24 3.95
2532 4203 2.933906 TCGAAACCTAATGCATCGAACC 59.066 45.455 0.00 0.00 39.33 3.62
2533 4204 2.031683 CGAAACCTAATGCATCGAACCC 59.968 50.000 0.00 0.00 35.65 4.11
2534 4205 3.279434 GAAACCTAATGCATCGAACCCT 58.721 45.455 0.00 0.00 0.00 4.34
2535 4206 3.366052 AACCTAATGCATCGAACCCTT 57.634 42.857 0.00 0.00 0.00 3.95
2536 4207 3.366052 ACCTAATGCATCGAACCCTTT 57.634 42.857 0.00 0.00 0.00 3.11
2537 4208 3.016736 ACCTAATGCATCGAACCCTTTG 58.983 45.455 0.00 0.00 0.00 2.77
2538 4209 2.223572 CCTAATGCATCGAACCCTTTGC 60.224 50.000 0.00 0.00 35.67 3.68
2539 4210 0.532115 AATGCATCGAACCCTTTGCC 59.468 50.000 0.00 0.00 34.20 4.52
2540 4211 1.656818 ATGCATCGAACCCTTTGCCG 61.657 55.000 4.13 0.00 34.20 5.69
2541 4212 2.038269 GCATCGAACCCTTTGCCGA 61.038 57.895 0.00 0.00 35.43 5.54
2542 4213 1.376609 GCATCGAACCCTTTGCCGAT 61.377 55.000 0.00 0.00 41.72 4.18
2543 4214 0.657840 CATCGAACCCTTTGCCGATC 59.342 55.000 0.00 0.00 39.40 3.69
2544 4215 0.251916 ATCGAACCCTTTGCCGATCA 59.748 50.000 0.00 0.00 37.18 2.92
2545 4216 0.035598 TCGAACCCTTTGCCGATCAA 59.964 50.000 0.00 0.00 0.00 2.57
2546 4217 0.878416 CGAACCCTTTGCCGATCAAA 59.122 50.000 0.00 3.47 42.01 2.69
2547 4218 1.268352 CGAACCCTTTGCCGATCAAAA 59.732 47.619 0.00 0.00 43.44 2.44
2548 4219 2.668279 CGAACCCTTTGCCGATCAAAAG 60.668 50.000 0.00 0.00 43.44 2.27
2549 4220 2.286365 ACCCTTTGCCGATCAAAAGA 57.714 45.000 12.00 0.00 43.44 2.52
2550 4221 2.807676 ACCCTTTGCCGATCAAAAGAT 58.192 42.857 12.00 0.00 43.44 2.40
2551 4222 3.165071 ACCCTTTGCCGATCAAAAGATT 58.835 40.909 12.00 0.00 43.44 2.40
2552 4223 4.340617 ACCCTTTGCCGATCAAAAGATTA 58.659 39.130 12.00 0.00 43.44 1.75
2553 4224 4.399303 ACCCTTTGCCGATCAAAAGATTAG 59.601 41.667 12.00 3.75 43.44 1.73
2554 4225 4.202050 CCCTTTGCCGATCAAAAGATTAGG 60.202 45.833 12.00 0.00 43.44 2.69
2555 4226 4.640201 CCTTTGCCGATCAAAAGATTAGGA 59.360 41.667 12.00 0.00 43.44 2.94
2556 4227 5.125417 CCTTTGCCGATCAAAAGATTAGGAA 59.875 40.000 12.00 0.00 43.44 3.36
2557 4228 5.560966 TTGCCGATCAAAAGATTAGGAAC 57.439 39.130 0.00 0.00 0.00 3.62
2558 4229 3.945285 TGCCGATCAAAAGATTAGGAACC 59.055 43.478 0.00 0.00 0.00 3.62
2559 4230 3.002348 GCCGATCAAAAGATTAGGAACCG 59.998 47.826 0.00 0.00 0.00 4.44
2560 4231 4.189231 CCGATCAAAAGATTAGGAACCGT 58.811 43.478 0.00 0.00 0.00 4.83
2561 4232 4.270325 CCGATCAAAAGATTAGGAACCGTC 59.730 45.833 0.00 0.00 0.00 4.79
2562 4233 4.270325 CGATCAAAAGATTAGGAACCGTCC 59.730 45.833 0.00 0.00 45.35 4.79
2572 4243 2.845363 GGAACCGTCCTCCTTTTACA 57.155 50.000 0.00 0.00 41.24 2.41
2573 4244 3.345508 GGAACCGTCCTCCTTTTACAT 57.654 47.619 0.00 0.00 41.24 2.29
2574 4245 3.007635 GGAACCGTCCTCCTTTTACATG 58.992 50.000 0.00 0.00 41.24 3.21
2575 4246 3.307199 GGAACCGTCCTCCTTTTACATGA 60.307 47.826 0.00 0.00 41.24 3.07
2576 4247 4.514401 GAACCGTCCTCCTTTTACATGAT 58.486 43.478 0.00 0.00 0.00 2.45
2577 4248 5.395990 GGAACCGTCCTCCTTTTACATGATA 60.396 44.000 0.00 0.00 41.24 2.15
2578 4249 5.019785 ACCGTCCTCCTTTTACATGATAC 57.980 43.478 0.00 0.00 0.00 2.24
2579 4250 4.141779 ACCGTCCTCCTTTTACATGATACC 60.142 45.833 0.00 0.00 0.00 2.73
2580 4251 4.377897 CGTCCTCCTTTTACATGATACCC 58.622 47.826 0.00 0.00 0.00 3.69
2581 4252 4.101119 CGTCCTCCTTTTACATGATACCCT 59.899 45.833 0.00 0.00 0.00 4.34
2582 4253 5.396436 CGTCCTCCTTTTACATGATACCCTT 60.396 44.000 0.00 0.00 0.00 3.95
2583 4254 5.823045 GTCCTCCTTTTACATGATACCCTTG 59.177 44.000 0.00 0.00 0.00 3.61
2584 4255 4.580580 CCTCCTTTTACATGATACCCTTGC 59.419 45.833 0.00 0.00 0.00 4.01
2585 4256 4.532834 TCCTTTTACATGATACCCTTGCC 58.467 43.478 0.00 0.00 0.00 4.52
2586 4257 3.315191 CCTTTTACATGATACCCTTGCCG 59.685 47.826 0.00 0.00 0.00 5.69
2587 4258 3.916359 TTTACATGATACCCTTGCCGA 57.084 42.857 0.00 0.00 0.00 5.54
2588 4259 3.916359 TTACATGATACCCTTGCCGAA 57.084 42.857 0.00 0.00 0.00 4.30
2589 4260 2.332063 ACATGATACCCTTGCCGAAG 57.668 50.000 0.00 0.00 0.00 3.79
2590 4261 1.837439 ACATGATACCCTTGCCGAAGA 59.163 47.619 0.00 0.00 0.00 2.87
2591 4262 2.238646 ACATGATACCCTTGCCGAAGAA 59.761 45.455 0.00 0.00 0.00 2.52
2592 4263 2.691409 TGATACCCTTGCCGAAGAAG 57.309 50.000 0.00 0.00 0.00 2.85
2593 4264 1.209504 TGATACCCTTGCCGAAGAAGG 59.790 52.381 0.00 0.00 39.92 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.290641 AGTCTCGAAAAGCACGCAATTT 59.709 40.909 0.00 0.00 0.00 1.82
194 195 6.461788 GGTGTTTCCAGTTATAACTTGGCAAA 60.462 38.462 15.60 16.17 37.08 3.68
216 219 8.682936 ATCTTATTTCCAGCTATAACTTGGTG 57.317 34.615 0.00 0.00 33.65 4.17
217 220 7.657761 CGATCTTATTTCCAGCTATAACTTGGT 59.342 37.037 0.00 0.00 33.65 3.67
218 221 7.872993 TCGATCTTATTTCCAGCTATAACTTGG 59.127 37.037 0.00 0.00 0.00 3.61
219 222 8.818141 TCGATCTTATTTCCAGCTATAACTTG 57.182 34.615 0.00 0.00 0.00 3.16
220 223 9.832445 TTTCGATCTTATTTCCAGCTATAACTT 57.168 29.630 0.00 0.00 0.00 2.66
221 224 9.832445 TTTTCGATCTTATTTCCAGCTATAACT 57.168 29.630 0.00 0.00 0.00 2.24
277 280 1.131883 GCGCAAATTCTCACATCAGCT 59.868 47.619 0.30 0.00 0.00 4.24
278 281 1.135603 TGCGCAAATTCTCACATCAGC 60.136 47.619 8.16 0.00 0.00 4.26
279 282 2.905959 TGCGCAAATTCTCACATCAG 57.094 45.000 8.16 0.00 0.00 2.90
280 283 3.853831 AATGCGCAAATTCTCACATCA 57.146 38.095 17.11 0.00 0.00 3.07
281 284 4.168014 TGAAATGCGCAAATTCTCACATC 58.832 39.130 28.41 10.83 0.00 3.06
286 289 5.520022 ACATTTGAAATGCGCAAATTCTC 57.480 34.783 28.41 16.54 42.33 2.87
287 290 5.927954 AACATTTGAAATGCGCAAATTCT 57.072 30.435 28.41 14.04 42.33 2.40
294 300 4.907188 TCATGAAACATTTGAAATGCGC 57.093 36.364 17.19 0.00 0.00 6.09
302 308 6.702972 TGGCGTTAATTCATGAAACATTTG 57.297 33.333 13.09 2.67 0.00 2.32
312 322 5.590259 AGTTATCTGCTTGGCGTTAATTCAT 59.410 36.000 0.00 0.00 0.00 2.57
321 331 3.374988 TGAATCAAGTTATCTGCTTGGCG 59.625 43.478 5.39 0.00 42.44 5.69
323 333 7.615582 TTACTGAATCAAGTTATCTGCTTGG 57.384 36.000 5.39 0.00 42.44 3.61
366 376 5.810525 ACATGCAAAGATTATACAAGTCGC 58.189 37.500 0.00 0.00 0.00 5.19
367 377 9.935682 ATTAACATGCAAAGATTATACAAGTCG 57.064 29.630 0.00 0.00 0.00 4.18
409 419 4.872124 GTGAACCCCTTATACGAAACGAAT 59.128 41.667 0.00 0.00 0.00 3.34
410 420 4.244862 GTGAACCCCTTATACGAAACGAA 58.755 43.478 0.00 0.00 0.00 3.85
412 422 2.599973 CGTGAACCCCTTATACGAAACG 59.400 50.000 0.00 0.00 36.94 3.60
413 423 3.588955 ACGTGAACCCCTTATACGAAAC 58.411 45.455 0.00 0.00 38.08 2.78
414 424 3.959535 ACGTGAACCCCTTATACGAAA 57.040 42.857 0.00 0.00 38.08 3.46
416 430 5.360714 AGAAATACGTGAACCCCTTATACGA 59.639 40.000 0.00 0.00 38.08 3.43
418 432 8.985805 CATAAGAAATACGTGAACCCCTTATAC 58.014 37.037 0.00 0.00 0.00 1.47
498 512 6.202954 CGTTTGTATATGGACTTCAATCTCCC 59.797 42.308 0.00 0.00 0.00 4.30
499 513 6.202954 CCGTTTGTATATGGACTTCAATCTCC 59.797 42.308 0.00 0.00 0.00 3.71
531 545 0.675522 AAAGGGTGCAACGGGTATCG 60.676 55.000 0.00 0.00 45.88 2.92
538 552 3.034721 TCTGTACTAAAGGGTGCAACG 57.965 47.619 0.00 0.00 38.12 4.10
649 1858 5.907391 AGAACACAAACGCTTATTTTTCTCG 59.093 36.000 0.00 0.00 0.00 4.04
682 1891 6.757897 TCCAGCCATTAATTCTTGTAACTG 57.242 37.500 0.00 0.00 0.00 3.16
683 1892 7.961326 ATTCCAGCCATTAATTCTTGTAACT 57.039 32.000 0.00 0.00 0.00 2.24
684 1893 9.516314 GTTATTCCAGCCATTAATTCTTGTAAC 57.484 33.333 0.00 0.00 0.00 2.50
685 1894 9.249053 TGTTATTCCAGCCATTAATTCTTGTAA 57.751 29.630 0.00 0.00 0.00 2.41
686 1895 8.815565 TGTTATTCCAGCCATTAATTCTTGTA 57.184 30.769 0.00 0.00 0.00 2.41
687 1896 7.716799 TGTTATTCCAGCCATTAATTCTTGT 57.283 32.000 0.00 0.00 0.00 3.16
701 1910 6.449698 AGTGCATGAAAAGTTGTTATTCCAG 58.550 36.000 0.00 0.00 0.00 3.86
735 1944 4.574759 GCGTATTTTTGTATGTGTCTCGG 58.425 43.478 0.00 0.00 0.00 4.63
736 1945 4.201551 ACGCGTATTTTTGTATGTGTCTCG 60.202 41.667 11.67 0.00 30.64 4.04
738 1947 5.600908 AACGCGTATTTTTGTATGTGTCT 57.399 34.783 14.46 0.00 34.24 3.41
739 1948 6.663480 AAAACGCGTATTTTTGTATGTGTC 57.337 33.333 14.46 0.00 34.24 3.67
776 1985 8.024285 TGTTCGTAAAAACATGTGTCTCTTTTT 58.976 29.630 9.74 9.01 34.31 1.94
777 1986 7.531716 TGTTCGTAAAAACATGTGTCTCTTTT 58.468 30.769 0.00 4.75 34.31 2.27
779 1988 6.671614 TGTTCGTAAAAACATGTGTCTCTT 57.328 33.333 0.00 0.00 34.31 2.85
780 1989 6.671614 TTGTTCGTAAAAACATGTGTCTCT 57.328 33.333 0.00 0.00 38.83 3.10
842 2495 4.019411 CCTAAATTTGGACAGGCCCATTTT 60.019 41.667 0.00 0.00 35.87 1.82
933 2586 0.709992 AGAGGAAGAGACTGGAGGCT 59.290 55.000 0.00 0.00 0.00 4.58
960 2617 0.040692 GTTTCGCCGTCTTTGGGTTC 60.041 55.000 0.00 0.00 0.00 3.62
1140 2802 4.767255 GACTGGGAGGCCACTGCG 62.767 72.222 5.01 0.00 38.85 5.18
1605 3267 6.430451 GCGTTACATATTGCAAAGATAAGCT 58.570 36.000 1.71 0.00 0.00 3.74
1621 3283 6.750039 GCATTACTACAAAATTGGCGTTACAT 59.250 34.615 0.00 0.00 0.00 2.29
1750 3415 6.089417 GGTGATTCTTGTTTAAAAATCCGCTG 59.911 38.462 7.53 0.00 0.00 5.18
1793 3458 0.033601 AACCAACCAAGCCAGACACA 60.034 50.000 0.00 0.00 0.00 3.72
1806 3471 2.099098 CAGTTCACCACCTGAAACCAAC 59.901 50.000 0.00 0.00 40.73 3.77
1829 3494 7.095313 CCAGAAGGAAGATCAATGATAACATCG 60.095 40.741 0.00 0.00 34.28 3.84
1927 3593 2.622942 ACGCAAAAAGGAGAAGATTGCA 59.377 40.909 9.16 0.00 44.94 4.08
1944 3610 3.305398 ACTTTTCACACCAAAAACGCA 57.695 38.095 0.00 0.00 0.00 5.24
1955 3621 7.750229 AATGAATGAAGCTCTACTTTTCACA 57.250 32.000 0.00 0.00 37.73 3.58
1977 3644 5.586243 CGGGTTCTTATCACATCTGACAAAT 59.414 40.000 0.00 0.00 0.00 2.32
1981 3648 3.458189 CCGGGTTCTTATCACATCTGAC 58.542 50.000 0.00 0.00 0.00 3.51
1986 3653 2.844348 AGTTCCCGGGTTCTTATCACAT 59.156 45.455 22.86 0.00 0.00 3.21
2020 3687 3.820557 ACAATTTGTGAGTGCTGTACCT 58.179 40.909 0.15 0.00 0.00 3.08
2082 3753 9.881414 GTTTAACTTCTTTCGATTTGTGTTTTC 57.119 29.630 0.00 0.00 0.00 2.29
2147 3818 3.693085 AGACTGCTGCCATTAAGTCAATG 59.307 43.478 16.33 0.00 41.22 2.82
2148 3819 3.693085 CAGACTGCTGCCATTAAGTCAAT 59.307 43.478 16.33 0.00 41.22 2.57
2149 3820 3.076621 CAGACTGCTGCCATTAAGTCAA 58.923 45.455 16.33 0.00 41.22 3.18
2150 3821 2.302733 TCAGACTGCTGCCATTAAGTCA 59.697 45.455 16.33 0.00 41.22 3.41
2151 3822 2.977914 TCAGACTGCTGCCATTAAGTC 58.022 47.619 8.54 8.54 42.01 3.01
2152 3823 3.539604 GATCAGACTGCTGCCATTAAGT 58.460 45.455 0.00 0.00 42.01 2.24
2153 3824 2.877168 GGATCAGACTGCTGCCATTAAG 59.123 50.000 0.00 0.00 42.01 1.85
2154 3825 2.421952 GGGATCAGACTGCTGCCATTAA 60.422 50.000 11.57 0.00 42.01 1.40
2155 3826 1.141657 GGGATCAGACTGCTGCCATTA 59.858 52.381 11.57 0.00 42.01 1.90
2156 3827 0.106819 GGGATCAGACTGCTGCCATT 60.107 55.000 11.57 0.00 42.01 3.16
2157 3828 0.987081 AGGGATCAGACTGCTGCCAT 60.987 55.000 17.78 4.79 42.01 4.40
2158 3829 1.203441 AAGGGATCAGACTGCTGCCA 61.203 55.000 17.78 0.00 42.01 4.92
2159 3830 0.034670 AAAGGGATCAGACTGCTGCC 60.035 55.000 8.69 8.69 42.01 4.85
2160 3831 1.065564 AGAAAGGGATCAGACTGCTGC 60.066 52.381 0.00 0.00 42.01 5.25
2161 3832 3.269178 GAAGAAAGGGATCAGACTGCTG 58.731 50.000 0.00 0.00 43.67 4.41
2162 3833 2.093764 CGAAGAAAGGGATCAGACTGCT 60.094 50.000 0.00 0.00 0.00 4.24
2163 3834 2.093973 TCGAAGAAAGGGATCAGACTGC 60.094 50.000 0.00 0.00 0.00 4.40
2164 3835 3.876274 TCGAAGAAAGGGATCAGACTG 57.124 47.619 0.00 0.00 0.00 3.51
2165 3836 6.546428 TTTATCGAAGAAAGGGATCAGACT 57.454 37.500 0.00 0.00 43.58 3.24
2166 3837 6.203723 CCATTTATCGAAGAAAGGGATCAGAC 59.796 42.308 17.39 0.00 43.58 3.51
2167 3838 6.099701 TCCATTTATCGAAGAAAGGGATCAGA 59.900 38.462 19.72 4.16 40.74 3.27
2168 3839 6.291377 TCCATTTATCGAAGAAAGGGATCAG 58.709 40.000 19.72 1.86 40.74 2.90
2169 3840 6.247229 TCCATTTATCGAAGAAAGGGATCA 57.753 37.500 19.72 4.72 40.74 2.92
2170 3841 5.180304 GCTCCATTTATCGAAGAAAGGGATC 59.820 44.000 22.30 17.19 43.62 3.36
2171 3842 5.066593 GCTCCATTTATCGAAGAAAGGGAT 58.933 41.667 22.30 0.00 43.62 3.85
2172 3843 4.451900 GCTCCATTTATCGAAGAAAGGGA 58.548 43.478 21.32 21.32 42.73 4.20
2173 3844 3.565902 GGCTCCATTTATCGAAGAAAGGG 59.434 47.826 16.58 16.58 43.58 3.95
2174 3845 3.248602 CGGCTCCATTTATCGAAGAAAGG 59.751 47.826 0.00 0.00 43.58 3.11
2175 3846 3.871594 ACGGCTCCATTTATCGAAGAAAG 59.128 43.478 0.00 0.00 43.58 2.62
2176 3847 3.621268 CACGGCTCCATTTATCGAAGAAA 59.379 43.478 0.00 0.00 43.58 2.52
2177 3848 3.194861 CACGGCTCCATTTATCGAAGAA 58.805 45.455 0.00 0.00 43.58 2.52
2178 3849 2.167693 ACACGGCTCCATTTATCGAAGA 59.832 45.455 0.00 0.00 45.75 2.87
2179 3850 2.285220 CACACGGCTCCATTTATCGAAG 59.715 50.000 0.00 0.00 0.00 3.79
2180 3851 2.093921 TCACACGGCTCCATTTATCGAA 60.094 45.455 0.00 0.00 0.00 3.71
2181 3852 1.478916 TCACACGGCTCCATTTATCGA 59.521 47.619 0.00 0.00 0.00 3.59
2182 3853 1.593006 GTCACACGGCTCCATTTATCG 59.407 52.381 0.00 0.00 0.00 2.92
2183 3854 2.609459 CTGTCACACGGCTCCATTTATC 59.391 50.000 0.00 0.00 0.00 1.75
2184 3855 2.632377 CTGTCACACGGCTCCATTTAT 58.368 47.619 0.00 0.00 0.00 1.40
2185 3856 1.943968 GCTGTCACACGGCTCCATTTA 60.944 52.381 0.00 0.00 46.62 1.40
2186 3857 1.237285 GCTGTCACACGGCTCCATTT 61.237 55.000 0.00 0.00 46.62 2.32
2187 3858 1.672356 GCTGTCACACGGCTCCATT 60.672 57.895 0.00 0.00 46.62 3.16
2188 3859 2.046892 GCTGTCACACGGCTCCAT 60.047 61.111 0.00 0.00 46.62 3.41
2210 3881 1.852895 GAAACTATGCGACTACCTGCG 59.147 52.381 0.00 0.00 0.00 5.18
2211 3882 2.888594 TGAAACTATGCGACTACCTGC 58.111 47.619 0.00 0.00 0.00 4.85
2212 3883 4.508124 GGAATGAAACTATGCGACTACCTG 59.492 45.833 0.00 0.00 0.00 4.00
2213 3884 4.443034 GGGAATGAAACTATGCGACTACCT 60.443 45.833 0.00 0.00 0.00 3.08
2214 3885 3.808174 GGGAATGAAACTATGCGACTACC 59.192 47.826 0.00 0.00 0.00 3.18
2215 3886 4.508124 CAGGGAATGAAACTATGCGACTAC 59.492 45.833 0.00 0.00 0.00 2.73
2216 3887 4.442893 CCAGGGAATGAAACTATGCGACTA 60.443 45.833 0.00 0.00 0.00 2.59
2217 3888 3.535561 CAGGGAATGAAACTATGCGACT 58.464 45.455 0.00 0.00 0.00 4.18
2218 3889 2.614057 CCAGGGAATGAAACTATGCGAC 59.386 50.000 0.00 0.00 0.00 5.19
2219 3890 2.503765 TCCAGGGAATGAAACTATGCGA 59.496 45.455 0.00 0.00 0.00 5.10
2220 3891 2.917933 TCCAGGGAATGAAACTATGCG 58.082 47.619 0.00 0.00 0.00 4.73
2221 3892 3.571401 CCATCCAGGGAATGAAACTATGC 59.429 47.826 0.00 0.00 0.00 3.14
2222 3893 3.571401 GCCATCCAGGGAATGAAACTATG 59.429 47.826 0.00 0.00 38.09 2.23
2223 3894 3.464833 AGCCATCCAGGGAATGAAACTAT 59.535 43.478 0.00 0.00 38.09 2.12
2224 3895 2.852449 AGCCATCCAGGGAATGAAACTA 59.148 45.455 0.00 0.00 38.09 2.24
2225 3896 1.642762 AGCCATCCAGGGAATGAAACT 59.357 47.619 0.00 0.00 38.09 2.66
2226 3897 2.149973 AGCCATCCAGGGAATGAAAC 57.850 50.000 0.00 0.00 38.09 2.78
2227 3898 4.217510 CATTAGCCATCCAGGGAATGAAA 58.782 43.478 0.00 0.00 38.09 2.69
2228 3899 3.836146 CATTAGCCATCCAGGGAATGAA 58.164 45.455 0.00 0.00 38.09 2.57
2229 3900 2.489619 GCATTAGCCATCCAGGGAATGA 60.490 50.000 0.00 0.00 38.09 2.57
2230 3901 1.891150 GCATTAGCCATCCAGGGAATG 59.109 52.381 0.00 0.00 38.09 2.67
2231 3902 1.785208 AGCATTAGCCATCCAGGGAAT 59.215 47.619 0.00 0.00 43.56 3.01
2232 3903 1.225373 AGCATTAGCCATCCAGGGAA 58.775 50.000 0.00 0.00 43.56 3.97
2233 3904 1.225373 AAGCATTAGCCATCCAGGGA 58.775 50.000 0.00 0.00 43.56 4.20
2234 3905 2.887152 GTTAAGCATTAGCCATCCAGGG 59.113 50.000 0.00 0.00 43.56 4.45
2235 3906 3.316308 GTGTTAAGCATTAGCCATCCAGG 59.684 47.826 0.00 0.00 43.56 4.45
2236 3907 4.036027 CAGTGTTAAGCATTAGCCATCCAG 59.964 45.833 0.00 0.00 43.56 3.86
2237 3908 3.947196 CAGTGTTAAGCATTAGCCATCCA 59.053 43.478 0.00 0.00 43.56 3.41
2238 3909 3.316308 CCAGTGTTAAGCATTAGCCATCC 59.684 47.826 0.00 0.00 43.56 3.51
2239 3910 3.947834 ACCAGTGTTAAGCATTAGCCATC 59.052 43.478 0.00 0.00 43.56 3.51
2240 3911 3.947834 GACCAGTGTTAAGCATTAGCCAT 59.052 43.478 0.00 0.00 43.56 4.40
2241 3912 3.244735 TGACCAGTGTTAAGCATTAGCCA 60.245 43.478 0.00 0.00 43.56 4.75
2242 3913 3.343617 TGACCAGTGTTAAGCATTAGCC 58.656 45.455 0.00 0.00 43.56 3.93
2243 3914 4.253685 TCTGACCAGTGTTAAGCATTAGC 58.746 43.478 0.00 0.00 42.56 3.09
2244 3915 7.470289 GTATCTGACCAGTGTTAAGCATTAG 57.530 40.000 0.00 0.00 0.00 1.73
2260 3931 7.329717 GCACTAGCATAACTTATGGTATCTGAC 59.670 40.741 17.19 10.23 45.02 3.51
2261 3932 7.233553 AGCACTAGCATAACTTATGGTATCTGA 59.766 37.037 17.19 2.05 45.02 3.27
2262 3933 7.382110 AGCACTAGCATAACTTATGGTATCTG 58.618 38.462 17.19 15.71 45.02 2.90
2263 3934 7.546250 AGCACTAGCATAACTTATGGTATCT 57.454 36.000 17.19 12.82 45.02 1.98
2264 3935 6.528423 CGAGCACTAGCATAACTTATGGTATC 59.472 42.308 17.19 12.29 45.02 2.24
2265 3936 6.390721 CGAGCACTAGCATAACTTATGGTAT 58.609 40.000 17.19 6.42 45.02 2.73
2266 3937 5.769367 CGAGCACTAGCATAACTTATGGTA 58.231 41.667 16.33 16.33 44.34 3.25
2268 3939 3.430218 GCGAGCACTAGCATAACTTATGG 59.570 47.826 10.24 0.00 45.49 2.74
2269 3940 4.302455 AGCGAGCACTAGCATAACTTATG 58.698 43.478 5.55 4.61 45.49 1.90
2270 3941 4.551388 GAGCGAGCACTAGCATAACTTAT 58.449 43.478 5.55 0.00 45.49 1.73
2271 3942 3.548214 CGAGCGAGCACTAGCATAACTTA 60.548 47.826 5.55 0.00 45.49 2.24
2272 3943 2.796383 CGAGCGAGCACTAGCATAACTT 60.796 50.000 5.55 0.00 45.49 2.66
2273 3944 1.268794 CGAGCGAGCACTAGCATAACT 60.269 52.381 5.55 0.00 45.49 2.24
2274 3945 1.124462 CGAGCGAGCACTAGCATAAC 58.876 55.000 5.55 0.00 45.49 1.89
2275 3946 0.030773 CCGAGCGAGCACTAGCATAA 59.969 55.000 5.55 0.00 45.49 1.90
2276 3947 1.654774 CCGAGCGAGCACTAGCATA 59.345 57.895 5.55 0.00 45.49 3.14
2277 3948 2.415010 CCGAGCGAGCACTAGCAT 59.585 61.111 5.55 0.00 45.49 3.79
2278 3949 4.498520 GCCGAGCGAGCACTAGCA 62.499 66.667 5.55 0.00 45.49 3.49
2279 3950 3.989698 TTGCCGAGCGAGCACTAGC 62.990 63.158 5.72 0.00 40.69 3.42
2280 3951 0.807667 ATTTGCCGAGCGAGCACTAG 60.808 55.000 5.72 0.00 40.69 2.57
2281 3952 0.391130 AATTTGCCGAGCGAGCACTA 60.391 50.000 5.72 0.00 40.69 2.74
2282 3953 1.639298 GAATTTGCCGAGCGAGCACT 61.639 55.000 5.72 0.00 40.69 4.40
2283 3954 1.226128 GAATTTGCCGAGCGAGCAC 60.226 57.895 5.72 0.00 40.69 4.40
2284 3955 0.108377 TAGAATTTGCCGAGCGAGCA 60.108 50.000 0.00 2.70 38.81 4.26
2285 3956 1.193426 GATAGAATTTGCCGAGCGAGC 59.807 52.381 0.00 0.00 0.00 5.03
2286 3957 1.453524 CGATAGAATTTGCCGAGCGAG 59.546 52.381 0.00 0.00 39.76 5.03
2287 3958 1.487482 CGATAGAATTTGCCGAGCGA 58.513 50.000 0.00 0.00 39.76 4.93
2288 3959 0.508641 CCGATAGAATTTGCCGAGCG 59.491 55.000 0.00 0.00 39.76 5.03
2289 3960 1.583054 ACCGATAGAATTTGCCGAGC 58.417 50.000 0.00 0.00 39.76 5.03
2290 3961 3.194861 TGAACCGATAGAATTTGCCGAG 58.805 45.455 0.00 0.00 39.76 4.63
2291 3962 3.194861 CTGAACCGATAGAATTTGCCGA 58.805 45.455 0.00 0.00 39.76 5.54
2292 3963 2.286418 GCTGAACCGATAGAATTTGCCG 60.286 50.000 0.00 0.00 39.76 5.69
2293 3964 2.682856 TGCTGAACCGATAGAATTTGCC 59.317 45.455 0.00 0.00 39.76 4.52
2294 3965 3.790123 GCTGCTGAACCGATAGAATTTGC 60.790 47.826 0.00 0.00 39.76 3.68
2295 3966 3.544834 CGCTGCTGAACCGATAGAATTTG 60.545 47.826 0.00 0.00 39.76 2.32
2296 3967 2.609459 CGCTGCTGAACCGATAGAATTT 59.391 45.455 0.00 0.00 39.76 1.82
2297 3968 2.205074 CGCTGCTGAACCGATAGAATT 58.795 47.619 0.00 0.00 39.76 2.17
2298 3969 1.137086 ACGCTGCTGAACCGATAGAAT 59.863 47.619 0.00 0.00 39.76 2.40
2299 3970 0.530744 ACGCTGCTGAACCGATAGAA 59.469 50.000 0.00 0.00 39.76 2.10
2300 3971 0.100682 GACGCTGCTGAACCGATAGA 59.899 55.000 0.00 0.00 39.76 1.98
2301 3972 0.101399 AGACGCTGCTGAACCGATAG 59.899 55.000 0.00 0.00 0.00 2.08
2302 3973 0.530744 AAGACGCTGCTGAACCGATA 59.469 50.000 0.00 0.00 0.00 2.92
2303 3974 0.530744 TAAGACGCTGCTGAACCGAT 59.469 50.000 0.00 0.00 0.00 4.18
2304 3975 0.109272 CTAAGACGCTGCTGAACCGA 60.109 55.000 0.00 0.00 0.00 4.69
2305 3976 0.388649 ACTAAGACGCTGCTGAACCG 60.389 55.000 0.00 0.00 0.00 4.44
2306 3977 2.531206 CTACTAAGACGCTGCTGAACC 58.469 52.381 0.00 0.00 0.00 3.62
2307 3978 2.163815 TCCTACTAAGACGCTGCTGAAC 59.836 50.000 0.00 0.00 0.00 3.18
2308 3979 2.423892 CTCCTACTAAGACGCTGCTGAA 59.576 50.000 0.00 0.00 0.00 3.02
2309 3980 2.017782 CTCCTACTAAGACGCTGCTGA 58.982 52.381 0.00 0.00 0.00 4.26
2310 3981 1.535015 GCTCCTACTAAGACGCTGCTG 60.535 57.143 0.00 0.00 0.00 4.41
2311 3982 0.741915 GCTCCTACTAAGACGCTGCT 59.258 55.000 0.00 0.00 0.00 4.24
2312 3983 0.592754 CGCTCCTACTAAGACGCTGC 60.593 60.000 0.00 0.00 0.00 5.25
2313 3984 0.029567 CCGCTCCTACTAAGACGCTG 59.970 60.000 0.00 0.00 0.00 5.18
2314 3985 0.107312 TCCGCTCCTACTAAGACGCT 60.107 55.000 0.00 0.00 0.00 5.07
2315 3986 0.737219 TTCCGCTCCTACTAAGACGC 59.263 55.000 0.00 0.00 0.00 5.19
2316 3987 1.334243 CCTTCCGCTCCTACTAAGACG 59.666 57.143 0.00 0.00 0.00 4.18
2317 3988 1.682323 CCCTTCCGCTCCTACTAAGAC 59.318 57.143 0.00 0.00 0.00 3.01
2318 3989 1.567649 TCCCTTCCGCTCCTACTAAGA 59.432 52.381 0.00 0.00 0.00 2.10
2319 3990 2.068834 TCCCTTCCGCTCCTACTAAG 57.931 55.000 0.00 0.00 0.00 2.18
2320 3991 2.317040 CATCCCTTCCGCTCCTACTAA 58.683 52.381 0.00 0.00 0.00 2.24
2321 3992 1.217183 ACATCCCTTCCGCTCCTACTA 59.783 52.381 0.00 0.00 0.00 1.82
2322 3993 0.032017 ACATCCCTTCCGCTCCTACT 60.032 55.000 0.00 0.00 0.00 2.57
2323 3994 1.700955 TACATCCCTTCCGCTCCTAC 58.299 55.000 0.00 0.00 0.00 3.18
2324 3995 2.037144 GTTACATCCCTTCCGCTCCTA 58.963 52.381 0.00 0.00 0.00 2.94
2325 3996 0.831307 GTTACATCCCTTCCGCTCCT 59.169 55.000 0.00 0.00 0.00 3.69
2326 3997 0.539986 TGTTACATCCCTTCCGCTCC 59.460 55.000 0.00 0.00 0.00 4.70
2327 3998 2.280628 CTTGTTACATCCCTTCCGCTC 58.719 52.381 0.00 0.00 0.00 5.03
2328 3999 1.065418 CCTTGTTACATCCCTTCCGCT 60.065 52.381 0.00 0.00 0.00 5.52
2329 4000 1.065709 TCCTTGTTACATCCCTTCCGC 60.066 52.381 0.00 0.00 0.00 5.54
2330 4001 2.906354 CTCCTTGTTACATCCCTTCCG 58.094 52.381 0.00 0.00 0.00 4.30
2331 4002 2.026262 TGCTCCTTGTTACATCCCTTCC 60.026 50.000 0.00 0.00 0.00 3.46
2332 4003 3.055094 TCTGCTCCTTGTTACATCCCTTC 60.055 47.826 0.00 0.00 0.00 3.46
2333 4004 2.912956 TCTGCTCCTTGTTACATCCCTT 59.087 45.455 0.00 0.00 0.00 3.95
2334 4005 2.551270 TCTGCTCCTTGTTACATCCCT 58.449 47.619 0.00 0.00 0.00 4.20
2335 4006 3.350219 TTCTGCTCCTTGTTACATCCC 57.650 47.619 0.00 0.00 0.00 3.85
2336 4007 3.440522 GGTTTCTGCTCCTTGTTACATCC 59.559 47.826 0.00 0.00 0.00 3.51
2337 4008 4.327680 AGGTTTCTGCTCCTTGTTACATC 58.672 43.478 0.00 0.00 0.00 3.06
2338 4009 4.373156 AGGTTTCTGCTCCTTGTTACAT 57.627 40.909 0.00 0.00 0.00 2.29
2339 4010 3.857157 AGGTTTCTGCTCCTTGTTACA 57.143 42.857 0.00 0.00 0.00 2.41
2340 4011 4.001652 GGTAGGTTTCTGCTCCTTGTTAC 58.998 47.826 0.00 0.00 35.51 2.50
2341 4012 3.306502 CGGTAGGTTTCTGCTCCTTGTTA 60.307 47.826 0.00 0.00 35.51 2.41
2342 4013 2.550208 CGGTAGGTTTCTGCTCCTTGTT 60.550 50.000 0.00 0.00 35.51 2.83
2343 4014 1.002087 CGGTAGGTTTCTGCTCCTTGT 59.998 52.381 0.00 0.00 35.51 3.16
2344 4015 1.002087 ACGGTAGGTTTCTGCTCCTTG 59.998 52.381 0.00 0.00 35.51 3.61
2345 4016 1.349067 ACGGTAGGTTTCTGCTCCTT 58.651 50.000 0.00 0.00 35.51 3.36
2346 4017 1.349067 AACGGTAGGTTTCTGCTCCT 58.651 50.000 0.00 0.00 34.41 3.69
2347 4018 3.259902 CTTAACGGTAGGTTTCTGCTCC 58.740 50.000 0.00 0.00 40.09 4.70
2348 4019 3.056322 TCCTTAACGGTAGGTTTCTGCTC 60.056 47.826 0.00 0.00 40.09 4.26
2349 4020 2.901839 TCCTTAACGGTAGGTTTCTGCT 59.098 45.455 0.00 0.00 40.09 4.24
2350 4021 3.323751 TCCTTAACGGTAGGTTTCTGC 57.676 47.619 0.00 0.00 40.09 4.26
2351 4022 3.999001 GGTTCCTTAACGGTAGGTTTCTG 59.001 47.826 0.00 0.00 40.09 3.02
2352 4023 3.906218 AGGTTCCTTAACGGTAGGTTTCT 59.094 43.478 0.00 0.00 40.09 2.52
2353 4024 4.277515 AGGTTCCTTAACGGTAGGTTTC 57.722 45.455 0.00 0.00 40.09 2.78
2354 4025 4.392047 CAAGGTTCCTTAACGGTAGGTTT 58.608 43.478 3.64 0.00 40.09 3.27
2355 4026 3.244665 CCAAGGTTCCTTAACGGTAGGTT 60.245 47.826 3.64 0.00 42.75 3.50
2356 4027 2.303890 CCAAGGTTCCTTAACGGTAGGT 59.696 50.000 3.64 0.00 36.39 3.08
2357 4028 2.568509 TCCAAGGTTCCTTAACGGTAGG 59.431 50.000 3.64 0.37 36.39 3.18
2358 4029 3.967332 TCCAAGGTTCCTTAACGGTAG 57.033 47.619 3.64 0.00 36.39 3.18
2359 4030 4.703379 TTTCCAAGGTTCCTTAACGGTA 57.297 40.909 3.64 0.00 36.39 4.02
2360 4031 3.581265 TTTCCAAGGTTCCTTAACGGT 57.419 42.857 3.64 0.00 36.39 4.83
2361 4032 4.794981 GCTTTTTCCAAGGTTCCTTAACGG 60.795 45.833 3.64 2.39 36.39 4.44
2362 4033 4.295870 GCTTTTTCCAAGGTTCCTTAACG 58.704 43.478 3.64 0.00 36.39 3.18
2363 4034 4.628074 GGCTTTTTCCAAGGTTCCTTAAC 58.372 43.478 3.64 0.00 34.66 2.01
2364 4035 3.319689 CGGCTTTTTCCAAGGTTCCTTAA 59.680 43.478 3.64 0.00 0.00 1.85
2365 4036 2.888414 CGGCTTTTTCCAAGGTTCCTTA 59.112 45.455 3.64 0.00 0.00 2.69
2366 4037 1.686587 CGGCTTTTTCCAAGGTTCCTT 59.313 47.619 0.00 0.00 0.00 3.36
2367 4038 1.133606 TCGGCTTTTTCCAAGGTTCCT 60.134 47.619 0.00 0.00 0.00 3.36
2368 4039 1.324383 TCGGCTTTTTCCAAGGTTCC 58.676 50.000 0.00 0.00 0.00 3.62
2369 4040 3.120792 GTTTCGGCTTTTTCCAAGGTTC 58.879 45.455 0.00 0.00 0.00 3.62
2370 4041 2.159014 GGTTTCGGCTTTTTCCAAGGTT 60.159 45.455 0.00 0.00 0.00 3.50
2371 4042 1.411246 GGTTTCGGCTTTTTCCAAGGT 59.589 47.619 0.00 0.00 0.00 3.50
2372 4043 1.686587 AGGTTTCGGCTTTTTCCAAGG 59.313 47.619 0.00 0.00 0.00 3.61
2373 4044 3.057526 CCTAGGTTTCGGCTTTTTCCAAG 60.058 47.826 0.00 0.00 0.00 3.61
2374 4045 2.888414 CCTAGGTTTCGGCTTTTTCCAA 59.112 45.455 0.00 0.00 0.00 3.53
2375 4046 2.510613 CCTAGGTTTCGGCTTTTTCCA 58.489 47.619 0.00 0.00 0.00 3.53
2376 4047 1.816835 CCCTAGGTTTCGGCTTTTTCC 59.183 52.381 8.29 0.00 0.00 3.13
2377 4048 2.511659 ACCCTAGGTTTCGGCTTTTTC 58.488 47.619 8.29 0.00 27.29 2.29
2378 4049 2.670019 ACCCTAGGTTTCGGCTTTTT 57.330 45.000 8.29 0.00 27.29 1.94
2379 4050 4.267536 GAATACCCTAGGTTTCGGCTTTT 58.732 43.478 8.29 0.00 37.09 2.27
2380 4051 3.371273 GGAATACCCTAGGTTTCGGCTTT 60.371 47.826 8.29 0.00 37.09 3.51
2381 4052 2.172082 GGAATACCCTAGGTTTCGGCTT 59.828 50.000 8.29 0.00 37.09 4.35
2382 4053 1.767088 GGAATACCCTAGGTTTCGGCT 59.233 52.381 8.29 0.00 37.09 5.52
2383 4054 2.251409 GGAATACCCTAGGTTTCGGC 57.749 55.000 8.29 0.00 37.09 5.54
2394 4065 4.163427 TCAGATCTGATCAGGGAATACCC 58.837 47.826 21.67 0.00 44.74 3.69
2395 4066 5.306678 AGTTCAGATCTGATCAGGGAATACC 59.693 44.000 27.58 9.54 39.64 2.73
2396 4067 6.418057 AGTTCAGATCTGATCAGGGAATAC 57.582 41.667 27.58 18.86 39.64 1.89
2397 4068 6.612863 TGAAGTTCAGATCTGATCAGGGAATA 59.387 38.462 27.58 9.60 39.64 1.75
2398 4069 5.427806 TGAAGTTCAGATCTGATCAGGGAAT 59.572 40.000 27.58 8.95 39.64 3.01
2399 4070 4.779489 TGAAGTTCAGATCTGATCAGGGAA 59.221 41.667 27.58 16.63 39.64 3.97
2400 4071 4.356436 TGAAGTTCAGATCTGATCAGGGA 58.644 43.478 27.58 11.54 39.64 4.20
2401 4072 4.750021 TGAAGTTCAGATCTGATCAGGG 57.250 45.455 27.58 10.03 39.64 4.45
2402 4073 8.610896 GTTATTTGAAGTTCAGATCTGATCAGG 58.389 37.037 27.58 10.95 39.64 3.86
2403 4074 9.159364 TGTTATTTGAAGTTCAGATCTGATCAG 57.841 33.333 27.58 17.07 39.64 2.90
2404 4075 9.506018 TTGTTATTTGAAGTTCAGATCTGATCA 57.494 29.630 27.58 23.48 39.64 2.92
2405 4076 9.766277 GTTGTTATTTGAAGTTCAGATCTGATC 57.234 33.333 25.64 23.29 39.64 2.92
2406 4077 8.734386 GGTTGTTATTTGAAGTTCAGATCTGAT 58.266 33.333 25.64 11.64 39.64 2.90
2407 4078 7.719193 TGGTTGTTATTTGAAGTTCAGATCTGA 59.281 33.333 21.67 21.67 37.91 3.27
2408 4079 7.874940 TGGTTGTTATTTGAAGTTCAGATCTG 58.125 34.615 17.07 17.07 0.00 2.90
2409 4080 8.641498 ATGGTTGTTATTTGAAGTTCAGATCT 57.359 30.769 11.89 0.00 0.00 2.75
2410 4081 9.132521 CAATGGTTGTTATTTGAAGTTCAGATC 57.867 33.333 11.89 0.90 0.00 2.75
2411 4082 7.599998 GCAATGGTTGTTATTTGAAGTTCAGAT 59.400 33.333 12.99 12.99 0.00 2.90
2412 4083 6.922957 GCAATGGTTGTTATTTGAAGTTCAGA 59.077 34.615 5.56 1.61 0.00 3.27
2413 4084 6.146021 GGCAATGGTTGTTATTTGAAGTTCAG 59.854 38.462 5.56 0.00 0.00 3.02
2414 4085 5.988561 GGCAATGGTTGTTATTTGAAGTTCA 59.011 36.000 0.08 0.08 0.00 3.18
2415 4086 6.223120 AGGCAATGGTTGTTATTTGAAGTTC 58.777 36.000 0.00 0.00 0.00 3.01
2416 4087 6.173427 AGGCAATGGTTGTTATTTGAAGTT 57.827 33.333 0.00 0.00 0.00 2.66
2417 4088 5.806654 AGGCAATGGTTGTTATTTGAAGT 57.193 34.783 0.00 0.00 0.00 3.01
2418 4089 6.307800 CGTAAGGCAATGGTTGTTATTTGAAG 59.692 38.462 0.00 0.00 0.00 3.02
2419 4090 6.153067 CGTAAGGCAATGGTTGTTATTTGAA 58.847 36.000 0.00 0.00 0.00 2.69
2420 4091 5.241949 ACGTAAGGCAATGGTTGTTATTTGA 59.758 36.000 0.00 0.00 46.39 2.69
2421 4092 5.465935 ACGTAAGGCAATGGTTGTTATTTG 58.534 37.500 0.00 0.00 46.39 2.32
2422 4093 5.715434 ACGTAAGGCAATGGTTGTTATTT 57.285 34.783 0.00 0.00 46.39 1.40
2423 4094 5.124297 GGTACGTAAGGCAATGGTTGTTATT 59.876 40.000 0.00 0.00 46.39 1.40
2424 4095 4.637091 GGTACGTAAGGCAATGGTTGTTAT 59.363 41.667 0.00 0.00 46.39 1.89
2425 4096 4.002316 GGTACGTAAGGCAATGGTTGTTA 58.998 43.478 0.00 0.00 46.39 2.41
2426 4097 2.815503 GGTACGTAAGGCAATGGTTGTT 59.184 45.455 0.00 0.00 46.39 2.83
2427 4098 2.224572 TGGTACGTAAGGCAATGGTTGT 60.225 45.455 0.00 0.00 46.39 3.32
2428 4099 2.428491 TGGTACGTAAGGCAATGGTTG 58.572 47.619 0.00 0.00 46.39 3.77
2429 4100 2.863132 TGGTACGTAAGGCAATGGTT 57.137 45.000 0.00 0.00 46.39 3.67
2430 4101 3.013921 CAATGGTACGTAAGGCAATGGT 58.986 45.455 0.00 0.00 46.39 3.55
2431 4102 2.357637 CCAATGGTACGTAAGGCAATGG 59.642 50.000 0.00 0.00 46.39 3.16
2432 4103 2.223479 GCCAATGGTACGTAAGGCAATG 60.223 50.000 15.18 4.24 41.63 2.82
2433 4104 2.021457 GCCAATGGTACGTAAGGCAAT 58.979 47.619 15.18 0.00 41.63 3.56
2434 4105 1.003812 AGCCAATGGTACGTAAGGCAA 59.996 47.619 19.57 0.00 44.34 4.52
2435 4106 0.616371 AGCCAATGGTACGTAAGGCA 59.384 50.000 19.57 0.00 44.34 4.75
2436 4107 1.014352 CAGCCAATGGTACGTAAGGC 58.986 55.000 0.00 13.25 46.39 4.35
2437 4108 1.663695 CCAGCCAATGGTACGTAAGG 58.336 55.000 0.00 0.00 44.91 2.69
2447 4118 1.188863 CCTTCCTTTCCCAGCCAATG 58.811 55.000 0.00 0.00 0.00 2.82
2448 4119 0.786435 ACCTTCCTTTCCCAGCCAAT 59.214 50.000 0.00 0.00 0.00 3.16
2449 4120 0.178964 CACCTTCCTTTCCCAGCCAA 60.179 55.000 0.00 0.00 0.00 4.52
2450 4121 1.460255 CACCTTCCTTTCCCAGCCA 59.540 57.895 0.00 0.00 0.00 4.75
2451 4122 1.979155 GCACCTTCCTTTCCCAGCC 60.979 63.158 0.00 0.00 0.00 4.85
2452 4123 1.979155 GGCACCTTCCTTTCCCAGC 60.979 63.158 0.00 0.00 0.00 4.85
2453 4124 1.675641 CGGCACCTTCCTTTCCCAG 60.676 63.158 0.00 0.00 0.00 4.45
2454 4125 2.002018 AACGGCACCTTCCTTTCCCA 62.002 55.000 0.00 0.00 0.00 4.37
2455 4126 0.826256 AAACGGCACCTTCCTTTCCC 60.826 55.000 0.00 0.00 0.00 3.97
2456 4127 0.313987 CAAACGGCACCTTCCTTTCC 59.686 55.000 0.00 0.00 0.00 3.13
2457 4128 0.318699 GCAAACGGCACCTTCCTTTC 60.319 55.000 0.00 0.00 43.97 2.62
2458 4129 1.739667 GCAAACGGCACCTTCCTTT 59.260 52.632 0.00 0.00 43.97 3.11
2459 4130 3.443588 GCAAACGGCACCTTCCTT 58.556 55.556 0.00 0.00 43.97 3.36
2468 4139 1.644786 ATCTACTTGCGGCAAACGGC 61.645 55.000 17.13 0.00 44.51 5.68
2469 4140 0.373716 GATCTACTTGCGGCAAACGG 59.626 55.000 17.13 7.84 44.51 4.44
2471 4142 2.285488 GCTAGATCTACTTGCGGCAAAC 59.715 50.000 17.13 4.59 37.57 2.93
2472 4143 2.550978 GCTAGATCTACTTGCGGCAAA 58.449 47.619 17.13 1.76 37.57 3.68
2473 4144 2.225068 GCTAGATCTACTTGCGGCAA 57.775 50.000 15.55 15.55 37.57 4.52
2474 4145 3.967886 GCTAGATCTACTTGCGGCA 57.032 52.632 0.00 0.00 37.57 5.69
2478 4149 5.841810 AGTCAATCAGCTAGATCTACTTGC 58.158 41.667 0.00 1.16 45.03 4.01
2479 4150 6.142139 CGAGTCAATCAGCTAGATCTACTTG 58.858 44.000 0.00 0.60 35.39 3.16
2480 4151 5.825679 ACGAGTCAATCAGCTAGATCTACTT 59.174 40.000 0.00 0.00 35.39 2.24
2481 4152 5.373222 ACGAGTCAATCAGCTAGATCTACT 58.627 41.667 0.00 0.00 35.39 2.57
2482 4153 5.682943 ACGAGTCAATCAGCTAGATCTAC 57.317 43.478 0.00 0.00 35.39 2.59
2483 4154 5.823045 TGAACGAGTCAATCAGCTAGATCTA 59.177 40.000 1.69 1.69 35.39 1.98
2484 4155 4.642437 TGAACGAGTCAATCAGCTAGATCT 59.358 41.667 0.00 0.00 35.39 2.75
2485 4156 4.926244 TGAACGAGTCAATCAGCTAGATC 58.074 43.478 0.00 0.00 35.39 2.75
2486 4157 4.991153 TGAACGAGTCAATCAGCTAGAT 57.009 40.909 0.00 0.00 39.09 1.98
2487 4158 4.991153 ATGAACGAGTCAATCAGCTAGA 57.009 40.909 0.00 0.00 40.50 2.43
2488 4159 5.826586 ACTATGAACGAGTCAATCAGCTAG 58.173 41.667 0.00 0.00 40.50 3.42
2489 4160 5.504173 CGACTATGAACGAGTCAATCAGCTA 60.504 44.000 3.89 0.00 42.97 3.32
2490 4161 4.677584 GACTATGAACGAGTCAATCAGCT 58.322 43.478 0.00 0.00 42.47 4.24
2491 4162 3.483922 CGACTATGAACGAGTCAATCAGC 59.516 47.826 3.89 0.00 42.97 4.26
2492 4163 4.909894 TCGACTATGAACGAGTCAATCAG 58.090 43.478 3.89 0.00 42.97 2.90
2493 4164 4.957759 TCGACTATGAACGAGTCAATCA 57.042 40.909 3.89 0.00 42.97 2.57
2494 4165 5.004535 GGTTTCGACTATGAACGAGTCAATC 59.995 44.000 3.89 0.00 42.97 2.67
2495 4166 4.863131 GGTTTCGACTATGAACGAGTCAAT 59.137 41.667 3.89 0.00 42.97 2.57
2496 4167 4.022589 AGGTTTCGACTATGAACGAGTCAA 60.023 41.667 3.89 0.00 42.97 3.18
2497 4168 3.504906 AGGTTTCGACTATGAACGAGTCA 59.495 43.478 3.89 0.00 42.97 3.41
2498 4169 4.094090 AGGTTTCGACTATGAACGAGTC 57.906 45.455 0.00 0.00 40.02 3.36
2499 4170 5.633830 TTAGGTTTCGACTATGAACGAGT 57.366 39.130 0.00 0.00 39.59 4.18
2500 4171 5.051641 GCATTAGGTTTCGACTATGAACGAG 60.052 44.000 0.00 0.00 39.59 4.18
2501 4172 4.802039 GCATTAGGTTTCGACTATGAACGA 59.198 41.667 0.00 0.00 36.75 3.85
2502 4173 4.565166 TGCATTAGGTTTCGACTATGAACG 59.435 41.667 0.00 0.00 0.00 3.95
2503 4174 6.562270 CGATGCATTAGGTTTCGACTATGAAC 60.562 42.308 0.00 0.00 31.74 3.18
2504 4175 5.462068 CGATGCATTAGGTTTCGACTATGAA 59.538 40.000 0.00 0.00 31.74 2.57
2505 4176 4.982295 CGATGCATTAGGTTTCGACTATGA 59.018 41.667 0.00 0.00 31.74 2.15
2506 4177 4.982295 TCGATGCATTAGGTTTCGACTATG 59.018 41.667 0.00 0.00 34.24 2.23
2507 4178 5.196341 TCGATGCATTAGGTTTCGACTAT 57.804 39.130 0.00 0.00 34.24 2.12
2508 4179 4.642445 TCGATGCATTAGGTTTCGACTA 57.358 40.909 0.00 0.00 34.24 2.59
2509 4180 3.520290 TCGATGCATTAGGTTTCGACT 57.480 42.857 0.00 0.00 34.24 4.18
2510 4181 3.242316 GGTTCGATGCATTAGGTTTCGAC 60.242 47.826 0.00 0.00 38.42 4.20
2511 4182 2.933906 GGTTCGATGCATTAGGTTTCGA 59.066 45.455 0.00 0.60 37.08 3.71
2512 4183 2.031683 GGGTTCGATGCATTAGGTTTCG 59.968 50.000 0.00 0.00 0.00 3.46
2513 4184 3.279434 AGGGTTCGATGCATTAGGTTTC 58.721 45.455 0.00 0.00 0.00 2.78
2514 4185 3.366052 AGGGTTCGATGCATTAGGTTT 57.634 42.857 0.00 0.00 0.00 3.27
2515 4186 3.366052 AAGGGTTCGATGCATTAGGTT 57.634 42.857 0.00 0.00 0.00 3.50
2516 4187 3.016736 CAAAGGGTTCGATGCATTAGGT 58.983 45.455 0.00 0.00 0.00 3.08
2517 4188 2.223572 GCAAAGGGTTCGATGCATTAGG 60.224 50.000 0.00 0.00 38.63 2.69
2518 4189 2.223572 GGCAAAGGGTTCGATGCATTAG 60.224 50.000 0.00 0.00 40.51 1.73
2519 4190 1.748493 GGCAAAGGGTTCGATGCATTA 59.252 47.619 0.00 0.00 40.51 1.90
2520 4191 0.532115 GGCAAAGGGTTCGATGCATT 59.468 50.000 0.00 0.00 40.51 3.56
2521 4192 1.656818 CGGCAAAGGGTTCGATGCAT 61.657 55.000 0.00 0.00 40.51 3.96
2522 4193 2.331893 CGGCAAAGGGTTCGATGCA 61.332 57.895 8.54 0.00 40.51 3.96
2523 4194 1.376609 ATCGGCAAAGGGTTCGATGC 61.377 55.000 0.00 0.00 40.27 3.91
2524 4195 0.657840 GATCGGCAAAGGGTTCGATG 59.342 55.000 0.00 0.00 41.58 3.84
2525 4196 0.251916 TGATCGGCAAAGGGTTCGAT 59.748 50.000 0.00 0.00 43.75 3.59
2526 4197 0.035598 TTGATCGGCAAAGGGTTCGA 59.964 50.000 0.00 0.00 32.46 3.71
2527 4198 0.878416 TTTGATCGGCAAAGGGTTCG 59.122 50.000 1.11 0.00 41.37 3.95
2528 4199 2.556622 TCTTTTGATCGGCAAAGGGTTC 59.443 45.455 11.62 0.00 46.38 3.62
2529 4200 2.593026 TCTTTTGATCGGCAAAGGGTT 58.407 42.857 11.62 0.00 46.38 4.11
2530 4201 2.286365 TCTTTTGATCGGCAAAGGGT 57.714 45.000 11.62 0.00 46.38 4.34
2531 4202 3.874392 AATCTTTTGATCGGCAAAGGG 57.126 42.857 11.62 6.97 46.38 3.95
2532 4203 4.640201 TCCTAATCTTTTGATCGGCAAAGG 59.360 41.667 10.40 7.22 46.38 3.11
2533 4204 5.818136 TCCTAATCTTTTGATCGGCAAAG 57.182 39.130 5.78 5.78 46.38 2.77
2534 4205 5.105917 GGTTCCTAATCTTTTGATCGGCAAA 60.106 40.000 1.11 1.11 44.38 3.68
2535 4206 4.398044 GGTTCCTAATCTTTTGATCGGCAA 59.602 41.667 0.00 0.00 38.40 4.52
2536 4207 3.945285 GGTTCCTAATCTTTTGATCGGCA 59.055 43.478 0.00 0.00 38.40 5.69
2537 4208 3.002348 CGGTTCCTAATCTTTTGATCGGC 59.998 47.826 0.00 0.00 38.40 5.54
2538 4209 4.189231 ACGGTTCCTAATCTTTTGATCGG 58.811 43.478 0.00 0.00 38.40 4.18
2539 4210 4.270325 GGACGGTTCCTAATCTTTTGATCG 59.730 45.833 0.00 0.00 37.25 3.69
2540 4211 5.736486 GGACGGTTCCTAATCTTTTGATC 57.264 43.478 0.00 0.00 37.25 2.92
2553 4224 2.845363 TGTAAAAGGAGGACGGTTCC 57.155 50.000 0.00 0.00 43.22 3.62
2554 4225 3.934068 TCATGTAAAAGGAGGACGGTTC 58.066 45.455 0.00 0.00 0.00 3.62
2555 4226 4.569719 ATCATGTAAAAGGAGGACGGTT 57.430 40.909 0.00 0.00 0.00 4.44
2556 4227 4.141779 GGTATCATGTAAAAGGAGGACGGT 60.142 45.833 0.00 0.00 0.00 4.83
2557 4228 4.377897 GGTATCATGTAAAAGGAGGACGG 58.622 47.826 0.00 0.00 0.00 4.79
2558 4229 4.101119 AGGGTATCATGTAAAAGGAGGACG 59.899 45.833 0.00 0.00 0.00 4.79
2559 4230 5.632034 AGGGTATCATGTAAAAGGAGGAC 57.368 43.478 0.00 0.00 0.00 3.85
2560 4231 5.631481 GCAAGGGTATCATGTAAAAGGAGGA 60.631 44.000 0.00 0.00 0.00 3.71
2561 4232 4.580580 GCAAGGGTATCATGTAAAAGGAGG 59.419 45.833 0.00 0.00 0.00 4.30
2562 4233 4.580580 GGCAAGGGTATCATGTAAAAGGAG 59.419 45.833 0.00 0.00 0.00 3.69
2563 4234 4.532834 GGCAAGGGTATCATGTAAAAGGA 58.467 43.478 0.00 0.00 0.00 3.36
2564 4235 3.315191 CGGCAAGGGTATCATGTAAAAGG 59.685 47.826 0.00 0.00 0.00 3.11
2565 4236 4.196193 TCGGCAAGGGTATCATGTAAAAG 58.804 43.478 0.00 0.00 0.00 2.27
2566 4237 4.223556 TCGGCAAGGGTATCATGTAAAA 57.776 40.909 0.00 0.00 0.00 1.52
2567 4238 3.916359 TCGGCAAGGGTATCATGTAAA 57.084 42.857 0.00 0.00 0.00 2.01
2568 4239 3.452990 TCTTCGGCAAGGGTATCATGTAA 59.547 43.478 0.00 0.00 0.00 2.41
2569 4240 3.035363 TCTTCGGCAAGGGTATCATGTA 58.965 45.455 0.00 0.00 0.00 2.29
2570 4241 1.837439 TCTTCGGCAAGGGTATCATGT 59.163 47.619 0.00 0.00 0.00 3.21
2571 4242 2.620251 TCTTCGGCAAGGGTATCATG 57.380 50.000 0.00 0.00 0.00 3.07
2572 4243 2.158755 CCTTCTTCGGCAAGGGTATCAT 60.159 50.000 0.00 0.00 37.37 2.45
2573 4244 1.209504 CCTTCTTCGGCAAGGGTATCA 59.790 52.381 0.00 0.00 37.37 2.15
2574 4245 1.954927 CCTTCTTCGGCAAGGGTATC 58.045 55.000 0.00 0.00 37.37 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.