Multiple sequence alignment - TraesCS6B01G232000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G232000 chr6B 100.000 3579 0 0 1 3579 387924988 387921410 0.000000e+00 6610
1 TraesCS6B01G232000 chr6B 95.896 2875 96 10 708 3579 646722172 646725027 0.000000e+00 4636
2 TraesCS6B01G232000 chr6B 94.030 2881 132 14 708 3579 114230011 114232860 0.000000e+00 4331
3 TraesCS6B01G232000 chr6B 93.857 2230 102 14 708 2925 476708872 476711078 0.000000e+00 3326
4 TraesCS6B01G232000 chr6B 92.432 991 56 10 700 1676 245661389 245660404 0.000000e+00 1397
5 TraesCS6B01G232000 chr6B 88.994 318 23 3 707 1022 387917478 387917785 2.020000e-102 383
6 TraesCS6B01G232000 chr6B 87.774 319 31 7 708 1022 476712966 476712652 2.030000e-97 366
7 TraesCS6B01G232000 chr6B 87.578 322 21 6 708 1021 225321896 225321586 4.390000e-94 355
8 TraesCS6B01G232000 chr6B 96.651 209 7 0 499 707 503132661 503132869 7.350000e-92 348
9 TraesCS6B01G232000 chr2B 95.281 2882 91 16 708 3579 451484992 451487838 0.000000e+00 4527
10 TraesCS6B01G232000 chr2B 96.509 2091 63 2 1488 3578 178741719 178743799 0.000000e+00 3448
11 TraesCS6B01G232000 chr2B 92.140 2023 113 18 708 2716 36422145 36420155 0.000000e+00 2813
12 TraesCS6B01G232000 chr2B 92.941 510 25 3 1 499 600881410 600881919 0.000000e+00 732
13 TraesCS6B01G232000 chr2B 87.476 511 38 14 1 499 118623717 118624213 1.870000e-157 566
14 TraesCS6B01G232000 chr2B 89.308 318 22 4 707 1022 451517174 451516867 4.330000e-104 388
15 TraesCS6B01G232000 chr2B 97.129 209 6 0 499 707 203058056 203057848 1.580000e-93 353
16 TraesCS6B01G232000 chr2B 96.651 209 7 0 499 707 656464712 656464504 7.350000e-92 348
17 TraesCS6B01G232000 chr2B 96.190 210 8 0 499 708 171899392 171899183 9.510000e-91 344
18 TraesCS6B01G232000 chr5B 94.751 2877 106 14 711 3579 434055860 434053021 0.000000e+00 4434
19 TraesCS6B01G232000 chr5B 95.833 456 19 0 1 456 192882394 192882849 0.000000e+00 737
20 TraesCS6B01G232000 chr6A 94.067 2882 126 11 707 3579 35946508 35949353 0.000000e+00 4333
21 TraesCS6B01G232000 chr4A 95.455 2112 59 9 1011 3111 706721827 706719742 0.000000e+00 3334
22 TraesCS6B01G232000 chr4A 96.507 2004 56 3 1576 3579 621804894 621802905 0.000000e+00 3301
23 TraesCS6B01G232000 chr2A 96.158 2004 68 1 1576 3579 772403893 772405887 0.000000e+00 3265
24 TraesCS6B01G232000 chr2A 92.704 1028 45 8 707 1718 581577062 581576049 0.000000e+00 1456
25 TraesCS6B01G232000 chr2A 92.308 1027 56 10 701 1718 507386182 507385170 0.000000e+00 1437
26 TraesCS6B01G232000 chr2A 87.692 325 20 5 708 1022 581569057 581569371 9.450000e-96 361
27 TraesCS6B01G232000 chr5A 95.764 1983 71 5 1597 3579 13344017 13342048 0.000000e+00 3184
28 TraesCS6B01G232000 chr5A 87.937 315 31 7 708 1018 13331594 13331905 7.300000e-97 364
29 TraesCS6B01G232000 chr7A 95.499 1933 63 14 1656 3579 299416182 299418099 0.000000e+00 3066
30 TraesCS6B01G232000 chr7A 96.651 209 6 1 499 707 403739281 403739074 2.650000e-91 346
31 TraesCS6B01G232000 chr3A 92.488 1025 62 10 704 1718 171625543 171626562 0.000000e+00 1452
32 TraesCS6B01G232000 chr6D 89.151 931 61 22 706 1620 4320195 4319289 0.000000e+00 1123
33 TraesCS6B01G232000 chr6D 93.346 511 22 4 1 499 65042280 65041770 0.000000e+00 745
34 TraesCS6B01G232000 chr3B 90.238 881 54 9 708 1576 344147567 344146707 0.000000e+00 1122
35 TraesCS6B01G232000 chr3B 95.614 456 20 0 1 456 137096550 137097005 0.000000e+00 732
36 TraesCS6B01G232000 chr3B 92.941 510 25 4 1 499 532766448 532766957 0.000000e+00 732
37 TraesCS6B01G232000 chrUn 84.753 892 74 25 708 1584 30900493 30901337 0.000000e+00 837
38 TraesCS6B01G232000 chr2D 86.897 725 61 15 707 1422 625378061 625377362 0.000000e+00 782
39 TraesCS6B01G232000 chr1B 95.833 456 18 1 1 456 332047917 332048371 0.000000e+00 736
40 TraesCS6B01G232000 chr1B 96.651 209 7 0 499 707 80971462 80971254 7.350000e-92 348
41 TraesCS6B01G232000 chr1B 96.635 208 7 0 499 706 341220173 341219966 2.650000e-91 346
42 TraesCS6B01G232000 chr3D 92.941 510 25 3 1 499 133897031 133896522 0.000000e+00 732
43 TraesCS6B01G232000 chr3D 92.941 510 24 4 1 499 535265274 535265782 0.000000e+00 732
44 TraesCS6B01G232000 chr1D 92.941 510 25 6 1 499 139352585 139353094 0.000000e+00 732
45 TraesCS6B01G232000 chr1D 91.194 511 33 5 1 499 253482550 253483060 0.000000e+00 684
46 TraesCS6B01G232000 chr1D 90.766 509 36 5 1 499 190159940 190160447 0.000000e+00 669
47 TraesCS6B01G232000 chr4B 89.105 514 30 6 1 499 99930772 99931274 1.830000e-172 616
48 TraesCS6B01G232000 chr4B 96.651 209 7 0 499 707 410536197 410535989 7.350000e-92 348
49 TraesCS6B01G232000 chr4D 90.708 452 37 5 1 451 351535367 351534920 6.610000e-167 597
50 TraesCS6B01G232000 chr1A 87.695 512 35 12 1 499 324103750 324104246 4.010000e-159 571
51 TraesCS6B01G232000 chr7B 96.651 209 7 0 499 707 570642608 570642400 7.350000e-92 348


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G232000 chr6B 387921410 387924988 3578 True 6610 6610 100.000 1 3579 1 chr6B.!!$R3 3578
1 TraesCS6B01G232000 chr6B 646722172 646725027 2855 False 4636 4636 95.896 708 3579 1 chr6B.!!$F5 2871
2 TraesCS6B01G232000 chr6B 114230011 114232860 2849 False 4331 4331 94.030 708 3579 1 chr6B.!!$F1 2871
3 TraesCS6B01G232000 chr6B 476708872 476711078 2206 False 3326 3326 93.857 708 2925 1 chr6B.!!$F3 2217
4 TraesCS6B01G232000 chr6B 245660404 245661389 985 True 1397 1397 92.432 700 1676 1 chr6B.!!$R2 976
5 TraesCS6B01G232000 chr2B 451484992 451487838 2846 False 4527 4527 95.281 708 3579 1 chr2B.!!$F3 2871
6 TraesCS6B01G232000 chr2B 178741719 178743799 2080 False 3448 3448 96.509 1488 3578 1 chr2B.!!$F2 2090
7 TraesCS6B01G232000 chr2B 36420155 36422145 1990 True 2813 2813 92.140 708 2716 1 chr2B.!!$R1 2008
8 TraesCS6B01G232000 chr2B 600881410 600881919 509 False 732 732 92.941 1 499 1 chr2B.!!$F4 498
9 TraesCS6B01G232000 chr5B 434053021 434055860 2839 True 4434 4434 94.751 711 3579 1 chr5B.!!$R1 2868
10 TraesCS6B01G232000 chr6A 35946508 35949353 2845 False 4333 4333 94.067 707 3579 1 chr6A.!!$F1 2872
11 TraesCS6B01G232000 chr4A 706719742 706721827 2085 True 3334 3334 95.455 1011 3111 1 chr4A.!!$R2 2100
12 TraesCS6B01G232000 chr4A 621802905 621804894 1989 True 3301 3301 96.507 1576 3579 1 chr4A.!!$R1 2003
13 TraesCS6B01G232000 chr2A 772403893 772405887 1994 False 3265 3265 96.158 1576 3579 1 chr2A.!!$F2 2003
14 TraesCS6B01G232000 chr2A 581576049 581577062 1013 True 1456 1456 92.704 707 1718 1 chr2A.!!$R2 1011
15 TraesCS6B01G232000 chr2A 507385170 507386182 1012 True 1437 1437 92.308 701 1718 1 chr2A.!!$R1 1017
16 TraesCS6B01G232000 chr5A 13342048 13344017 1969 True 3184 3184 95.764 1597 3579 1 chr5A.!!$R1 1982
17 TraesCS6B01G232000 chr7A 299416182 299418099 1917 False 3066 3066 95.499 1656 3579 1 chr7A.!!$F1 1923
18 TraesCS6B01G232000 chr3A 171625543 171626562 1019 False 1452 1452 92.488 704 1718 1 chr3A.!!$F1 1014
19 TraesCS6B01G232000 chr6D 4319289 4320195 906 True 1123 1123 89.151 706 1620 1 chr6D.!!$R1 914
20 TraesCS6B01G232000 chr6D 65041770 65042280 510 True 745 745 93.346 1 499 1 chr6D.!!$R2 498
21 TraesCS6B01G232000 chr3B 344146707 344147567 860 True 1122 1122 90.238 708 1576 1 chr3B.!!$R1 868
22 TraesCS6B01G232000 chr3B 532766448 532766957 509 False 732 732 92.941 1 499 1 chr3B.!!$F2 498
23 TraesCS6B01G232000 chrUn 30900493 30901337 844 False 837 837 84.753 708 1584 1 chrUn.!!$F1 876
24 TraesCS6B01G232000 chr2D 625377362 625378061 699 True 782 782 86.897 707 1422 1 chr2D.!!$R1 715
25 TraesCS6B01G232000 chr3D 133896522 133897031 509 True 732 732 92.941 1 499 1 chr3D.!!$R1 498
26 TraesCS6B01G232000 chr3D 535265274 535265782 508 False 732 732 92.941 1 499 1 chr3D.!!$F1 498
27 TraesCS6B01G232000 chr1D 139352585 139353094 509 False 732 732 92.941 1 499 1 chr1D.!!$F1 498
28 TraesCS6B01G232000 chr1D 253482550 253483060 510 False 684 684 91.194 1 499 1 chr1D.!!$F3 498
29 TraesCS6B01G232000 chr1D 190159940 190160447 507 False 669 669 90.766 1 499 1 chr1D.!!$F2 498
30 TraesCS6B01G232000 chr4B 99930772 99931274 502 False 616 616 89.105 1 499 1 chr4B.!!$F1 498

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
170 171 0.032952 TTCTTCGTGGACCCTTCGTG 59.967 55.0 0.00 0.00 0.00 4.35 F
482 483 0.033405 TAACCCAGCTCTAGACGCCT 60.033 55.0 9.65 0.00 0.00 5.52 F
693 694 0.100682 CTCGCTAGTTGCTTAGCCGA 59.899 55.0 0.29 1.12 42.41 5.54 F
1692 1811 0.108233 CTCAAGTGGCTGCTCCTCTC 60.108 60.0 0.00 0.00 37.69 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1669 1788 0.610687 GGAGCAGCCACTTGAGTAGT 59.389 55.000 0.0 0.0 37.68 2.73 R
2294 2422 1.288350 CTCTGCATTCTTCAGCTCCG 58.712 55.000 0.0 0.0 0.00 4.63 R
2331 2459 2.260822 AGCTTCTCTTGGGTGAGCTTA 58.739 47.619 0.0 0.0 34.29 3.09 R
3377 3532 0.681733 GCGCCAAGATGGATCTCCTA 59.318 55.000 0.0 0.0 40.96 2.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 106 3.444034 CGTGAAGATCTACCCAAGTGAGA 59.556 47.826 0.00 0.00 0.00 3.27
106 107 4.098654 CGTGAAGATCTACCCAAGTGAGAT 59.901 45.833 0.00 0.00 32.57 2.75
115 116 6.023603 TCTACCCAAGTGAGATAAGTCCTTT 58.976 40.000 0.00 0.00 0.00 3.11
149 150 3.282021 CATGGTGGGATAGACAAGGTTG 58.718 50.000 0.00 0.00 0.00 3.77
150 151 1.004277 TGGTGGGATAGACAAGGTTGC 59.996 52.381 0.00 0.00 0.00 4.17
151 152 1.282157 GGTGGGATAGACAAGGTTGCT 59.718 52.381 0.00 0.00 0.00 3.91
152 153 2.290960 GGTGGGATAGACAAGGTTGCTT 60.291 50.000 0.00 0.00 0.00 3.91
153 154 3.010420 GTGGGATAGACAAGGTTGCTTC 58.990 50.000 0.00 0.00 0.00 3.86
154 155 2.912956 TGGGATAGACAAGGTTGCTTCT 59.087 45.455 0.00 0.00 0.00 2.85
155 156 3.330701 TGGGATAGACAAGGTTGCTTCTT 59.669 43.478 0.00 0.00 0.00 2.52
156 157 3.942115 GGGATAGACAAGGTTGCTTCTTC 59.058 47.826 0.00 0.00 0.00 2.87
157 158 3.619038 GGATAGACAAGGTTGCTTCTTCG 59.381 47.826 0.00 0.00 0.00 3.79
158 159 2.622064 AGACAAGGTTGCTTCTTCGT 57.378 45.000 0.00 0.00 0.00 3.85
159 160 2.213499 AGACAAGGTTGCTTCTTCGTG 58.787 47.619 0.00 0.00 0.00 4.35
160 161 1.264288 GACAAGGTTGCTTCTTCGTGG 59.736 52.381 0.00 0.00 0.00 4.94
161 162 1.134220 ACAAGGTTGCTTCTTCGTGGA 60.134 47.619 0.00 0.00 0.00 4.02
162 163 1.264288 CAAGGTTGCTTCTTCGTGGAC 59.736 52.381 0.00 0.00 0.00 4.02
163 164 0.250338 AGGTTGCTTCTTCGTGGACC 60.250 55.000 0.00 0.00 0.00 4.46
164 165 1.235281 GGTTGCTTCTTCGTGGACCC 61.235 60.000 0.00 0.00 0.00 4.46
165 166 0.250338 GTTGCTTCTTCGTGGACCCT 60.250 55.000 0.00 0.00 0.00 4.34
166 167 0.472471 TTGCTTCTTCGTGGACCCTT 59.528 50.000 0.00 0.00 0.00 3.95
167 168 0.034896 TGCTTCTTCGTGGACCCTTC 59.965 55.000 0.00 0.00 0.00 3.46
168 169 1.014564 GCTTCTTCGTGGACCCTTCG 61.015 60.000 0.00 0.00 0.00 3.79
169 170 0.317479 CTTCTTCGTGGACCCTTCGT 59.683 55.000 0.00 0.00 0.00 3.85
170 171 0.032952 TTCTTCGTGGACCCTTCGTG 59.967 55.000 0.00 0.00 0.00 4.35
171 172 1.374252 CTTCGTGGACCCTTCGTGG 60.374 63.158 0.00 0.00 0.00 4.94
188 189 3.319198 GGTGGAGCCCTTCGTGGA 61.319 66.667 0.00 0.00 38.35 4.02
189 190 2.047179 GTGGAGCCCTTCGTGGAC 60.047 66.667 0.00 0.00 38.35 4.02
190 191 2.203788 TGGAGCCCTTCGTGGACT 60.204 61.111 0.00 0.00 38.35 3.85
191 192 2.283529 TGGAGCCCTTCGTGGACTC 61.284 63.158 5.35 5.35 38.35 3.36
192 193 2.182030 GAGCCCTTCGTGGACTCG 59.818 66.667 0.00 0.00 38.35 4.18
193 194 3.991536 GAGCCCTTCGTGGACTCGC 62.992 68.421 0.00 0.00 38.35 5.03
196 197 4.717629 CCTTCGTGGACTCGCGCA 62.718 66.667 8.75 0.00 45.48 6.09
197 198 2.733218 CTTCGTGGACTCGCGCAA 60.733 61.111 8.75 0.00 45.48 4.85
198 199 3.000080 CTTCGTGGACTCGCGCAAC 62.000 63.158 8.75 0.00 45.48 4.17
201 202 2.665185 GTGGACTCGCGCAACCTT 60.665 61.111 8.75 0.00 0.00 3.50
202 203 2.110213 TGGACTCGCGCAACCTTT 59.890 55.556 8.75 0.00 0.00 3.11
203 204 0.947180 GTGGACTCGCGCAACCTTTA 60.947 55.000 8.75 0.00 0.00 1.85
204 205 0.947180 TGGACTCGCGCAACCTTTAC 60.947 55.000 8.75 0.00 0.00 2.01
205 206 1.632948 GGACTCGCGCAACCTTTACC 61.633 60.000 8.75 0.00 0.00 2.85
206 207 1.632948 GACTCGCGCAACCTTTACCC 61.633 60.000 8.75 0.00 0.00 3.69
207 208 1.375523 CTCGCGCAACCTTTACCCT 60.376 57.895 8.75 0.00 0.00 4.34
208 209 0.953960 CTCGCGCAACCTTTACCCTT 60.954 55.000 8.75 0.00 0.00 3.95
209 210 0.535553 TCGCGCAACCTTTACCCTTT 60.536 50.000 8.75 0.00 0.00 3.11
210 211 0.386731 CGCGCAACCTTTACCCTTTG 60.387 55.000 8.75 0.00 0.00 2.77
211 212 0.671796 GCGCAACCTTTACCCTTTGT 59.328 50.000 0.30 0.00 0.00 2.83
212 213 1.601914 GCGCAACCTTTACCCTTTGTG 60.602 52.381 0.30 0.00 33.52 3.33
213 214 1.000717 CGCAACCTTTACCCTTTGTGG 60.001 52.381 0.00 0.00 0.00 4.17
225 226 2.230660 CCTTTGTGGGTTGAAGTCTCC 58.769 52.381 0.00 0.00 0.00 3.71
226 227 2.422803 CCTTTGTGGGTTGAAGTCTCCA 60.423 50.000 0.00 0.00 0.00 3.86
227 228 3.490348 CTTTGTGGGTTGAAGTCTCCAT 58.510 45.455 0.00 0.00 0.00 3.41
228 229 2.859165 TGTGGGTTGAAGTCTCCATC 57.141 50.000 0.00 0.00 0.00 3.51
229 230 2.054021 TGTGGGTTGAAGTCTCCATCA 58.946 47.619 0.00 0.00 0.00 3.07
230 231 2.441375 TGTGGGTTGAAGTCTCCATCAA 59.559 45.455 0.00 0.00 33.37 2.57
234 235 3.795561 GTTGAAGTCTCCATCAACGTG 57.204 47.619 3.24 0.00 44.01 4.49
235 236 2.455674 TGAAGTCTCCATCAACGTGG 57.544 50.000 0.00 0.00 40.76 4.94
236 237 1.967779 TGAAGTCTCCATCAACGTGGA 59.032 47.619 0.00 0.00 45.78 4.02
237 238 2.567169 TGAAGTCTCCATCAACGTGGAT 59.433 45.455 0.00 0.00 46.67 3.41
238 239 2.680312 AGTCTCCATCAACGTGGATG 57.320 50.000 23.72 23.72 46.67 3.51
239 240 1.902508 AGTCTCCATCAACGTGGATGT 59.097 47.619 27.21 9.34 46.67 3.06
240 241 3.096852 AGTCTCCATCAACGTGGATGTA 58.903 45.455 27.21 14.32 46.67 2.29
241 242 3.119101 AGTCTCCATCAACGTGGATGTAC 60.119 47.826 27.21 21.39 46.67 2.90
242 243 2.159296 TCTCCATCAACGTGGATGTACG 60.159 50.000 27.21 14.90 46.67 3.67
243 244 1.819903 TCCATCAACGTGGATGTACGA 59.180 47.619 27.21 16.74 46.46 3.43
244 245 2.429250 TCCATCAACGTGGATGTACGAT 59.571 45.455 27.21 0.00 46.46 3.73
245 246 3.633065 TCCATCAACGTGGATGTACGATA 59.367 43.478 27.21 6.69 46.46 2.92
246 247 3.981416 CCATCAACGTGGATGTACGATAG 59.019 47.826 27.21 9.84 46.46 2.08
247 248 3.074504 TCAACGTGGATGTACGATAGC 57.925 47.619 5.23 0.00 46.46 2.97
248 249 2.424246 TCAACGTGGATGTACGATAGCA 59.576 45.455 5.23 0.00 46.46 3.49
249 250 2.486951 ACGTGGATGTACGATAGCAC 57.513 50.000 5.23 0.00 46.46 4.40
250 251 1.066605 ACGTGGATGTACGATAGCACC 59.933 52.381 5.23 0.00 46.46 5.01
251 252 1.066454 CGTGGATGTACGATAGCACCA 59.934 52.381 0.00 0.00 46.46 4.17
252 253 2.470821 GTGGATGTACGATAGCACCAC 58.529 52.381 0.00 0.00 39.20 4.16
253 254 1.411246 TGGATGTACGATAGCACCACC 59.589 52.381 0.00 0.00 42.67 4.61
254 255 1.687123 GGATGTACGATAGCACCACCT 59.313 52.381 0.00 0.00 42.67 4.00
255 256 2.889045 GGATGTACGATAGCACCACCTA 59.111 50.000 0.00 0.00 42.67 3.08
256 257 3.510360 GGATGTACGATAGCACCACCTAT 59.490 47.826 0.00 0.00 42.67 2.57
257 258 4.380655 GGATGTACGATAGCACCACCTATC 60.381 50.000 0.00 0.00 40.05 2.08
263 264 2.973694 TAGCACCACCTATCGAAACC 57.026 50.000 0.00 0.00 0.00 3.27
264 265 0.981183 AGCACCACCTATCGAAACCA 59.019 50.000 0.00 0.00 0.00 3.67
265 266 1.084289 GCACCACCTATCGAAACCAC 58.916 55.000 0.00 0.00 0.00 4.16
266 267 1.355971 CACCACCTATCGAAACCACG 58.644 55.000 0.00 0.00 0.00 4.94
267 268 0.248289 ACCACCTATCGAAACCACGG 59.752 55.000 0.00 0.00 0.00 4.94
268 269 0.533491 CCACCTATCGAAACCACGGA 59.467 55.000 0.00 0.00 0.00 4.69
269 270 1.138266 CCACCTATCGAAACCACGGAT 59.862 52.381 0.00 0.00 0.00 4.18
270 271 2.363038 CCACCTATCGAAACCACGGATA 59.637 50.000 0.00 0.00 0.00 2.59
271 272 3.181473 CCACCTATCGAAACCACGGATAA 60.181 47.826 0.00 0.00 0.00 1.75
272 273 4.435425 CACCTATCGAAACCACGGATAAA 58.565 43.478 0.00 0.00 0.00 1.40
273 274 4.871557 CACCTATCGAAACCACGGATAAAA 59.128 41.667 0.00 0.00 0.00 1.52
274 275 5.352016 CACCTATCGAAACCACGGATAAAAA 59.648 40.000 0.00 0.00 0.00 1.94
295 296 6.737254 AAAATATCGGTGTCTCGAAATTGT 57.263 33.333 0.00 0.00 42.69 2.71
296 297 5.718649 AATATCGGTGTCTCGAAATTGTG 57.281 39.130 0.00 0.00 42.69 3.33
297 298 2.519377 TCGGTGTCTCGAAATTGTGT 57.481 45.000 0.00 0.00 36.12 3.72
298 299 2.828877 TCGGTGTCTCGAAATTGTGTT 58.171 42.857 0.00 0.00 36.12 3.32
299 300 3.199677 TCGGTGTCTCGAAATTGTGTTT 58.800 40.909 0.00 0.00 36.12 2.83
300 301 3.001838 TCGGTGTCTCGAAATTGTGTTTG 59.998 43.478 0.00 0.00 36.12 2.93
301 302 3.042887 GGTGTCTCGAAATTGTGTTTGC 58.957 45.455 0.00 0.00 0.00 3.68
302 303 3.488384 GGTGTCTCGAAATTGTGTTTGCA 60.488 43.478 0.00 0.00 0.00 4.08
303 304 3.482110 GTGTCTCGAAATTGTGTTTGCAC 59.518 43.478 0.00 0.00 45.44 4.57
314 315 1.327303 TGTTTGCACACTCCAATCCC 58.673 50.000 4.37 0.00 0.00 3.85
315 316 1.327303 GTTTGCACACTCCAATCCCA 58.673 50.000 0.00 0.00 0.00 4.37
316 317 1.895131 GTTTGCACACTCCAATCCCAT 59.105 47.619 0.00 0.00 0.00 4.00
317 318 1.838112 TTGCACACTCCAATCCCATC 58.162 50.000 0.00 0.00 0.00 3.51
318 319 0.034186 TGCACACTCCAATCCCATCC 60.034 55.000 0.00 0.00 0.00 3.51
319 320 0.753111 GCACACTCCAATCCCATCCC 60.753 60.000 0.00 0.00 0.00 3.85
320 321 0.921896 CACACTCCAATCCCATCCCT 59.078 55.000 0.00 0.00 0.00 4.20
321 322 1.285962 CACACTCCAATCCCATCCCTT 59.714 52.381 0.00 0.00 0.00 3.95
322 323 2.003072 ACACTCCAATCCCATCCCTTT 58.997 47.619 0.00 0.00 0.00 3.11
323 324 3.053693 CACACTCCAATCCCATCCCTTTA 60.054 47.826 0.00 0.00 0.00 1.85
324 325 3.053619 ACACTCCAATCCCATCCCTTTAC 60.054 47.826 0.00 0.00 0.00 2.01
325 326 3.053693 CACTCCAATCCCATCCCTTTACA 60.054 47.826 0.00 0.00 0.00 2.41
326 327 3.793827 ACTCCAATCCCATCCCTTTACAT 59.206 43.478 0.00 0.00 0.00 2.29
327 328 4.232820 ACTCCAATCCCATCCCTTTACATT 59.767 41.667 0.00 0.00 0.00 2.71
328 329 4.803452 TCCAATCCCATCCCTTTACATTC 58.197 43.478 0.00 0.00 0.00 2.67
329 330 4.482025 TCCAATCCCATCCCTTTACATTCT 59.518 41.667 0.00 0.00 0.00 2.40
330 331 5.043432 TCCAATCCCATCCCTTTACATTCTT 60.043 40.000 0.00 0.00 0.00 2.52
331 332 5.069516 CCAATCCCATCCCTTTACATTCTTG 59.930 44.000 0.00 0.00 0.00 3.02
332 333 3.631250 TCCCATCCCTTTACATTCTTGC 58.369 45.455 0.00 0.00 0.00 4.01
333 334 3.011144 TCCCATCCCTTTACATTCTTGCA 59.989 43.478 0.00 0.00 0.00 4.08
334 335 3.768757 CCCATCCCTTTACATTCTTGCAA 59.231 43.478 0.00 0.00 0.00 4.08
335 336 4.406649 CCCATCCCTTTACATTCTTGCAAT 59.593 41.667 0.00 0.00 0.00 3.56
336 337 5.104817 CCCATCCCTTTACATTCTTGCAATT 60.105 40.000 0.00 0.00 0.00 2.32
337 338 6.408869 CCATCCCTTTACATTCTTGCAATTT 58.591 36.000 0.00 0.00 0.00 1.82
338 339 6.314400 CCATCCCTTTACATTCTTGCAATTTG 59.686 38.462 0.00 0.49 0.00 2.32
339 340 5.237048 TCCCTTTACATTCTTGCAATTTGC 58.763 37.500 14.49 14.49 45.29 3.68
353 354 4.961511 GCAATTTGCATGCTTTACTTTCC 58.038 39.130 20.33 0.00 44.26 3.13
354 355 4.434593 GCAATTTGCATGCTTTACTTTCCG 60.435 41.667 20.33 0.00 44.26 4.30
355 356 2.346099 TTGCATGCTTTACTTTCCGC 57.654 45.000 20.33 0.00 0.00 5.54
356 357 1.533625 TGCATGCTTTACTTTCCGCT 58.466 45.000 20.33 0.00 0.00 5.52
357 358 1.199789 TGCATGCTTTACTTTCCGCTG 59.800 47.619 20.33 0.00 0.00 5.18
358 359 1.900237 CATGCTTTACTTTCCGCTGC 58.100 50.000 0.00 0.00 0.00 5.25
359 360 1.470098 CATGCTTTACTTTCCGCTGCT 59.530 47.619 0.00 0.00 0.00 4.24
360 361 1.156736 TGCTTTACTTTCCGCTGCTC 58.843 50.000 0.00 0.00 0.00 4.26
361 362 1.156736 GCTTTACTTTCCGCTGCTCA 58.843 50.000 0.00 0.00 0.00 4.26
362 363 1.740025 GCTTTACTTTCCGCTGCTCAT 59.260 47.619 0.00 0.00 0.00 2.90
363 364 2.936498 GCTTTACTTTCCGCTGCTCATA 59.064 45.455 0.00 0.00 0.00 2.15
364 365 3.561725 GCTTTACTTTCCGCTGCTCATAT 59.438 43.478 0.00 0.00 0.00 1.78
365 366 4.750098 GCTTTACTTTCCGCTGCTCATATA 59.250 41.667 0.00 0.00 0.00 0.86
366 367 5.333416 GCTTTACTTTCCGCTGCTCATATAC 60.333 44.000 0.00 0.00 0.00 1.47
367 368 5.531122 TTACTTTCCGCTGCTCATATACT 57.469 39.130 0.00 0.00 0.00 2.12
368 369 3.983741 ACTTTCCGCTGCTCATATACTC 58.016 45.455 0.00 0.00 0.00 2.59
369 370 3.639094 ACTTTCCGCTGCTCATATACTCT 59.361 43.478 0.00 0.00 0.00 3.24
370 371 4.100189 ACTTTCCGCTGCTCATATACTCTT 59.900 41.667 0.00 0.00 0.00 2.85
371 372 3.650070 TCCGCTGCTCATATACTCTTG 57.350 47.619 0.00 0.00 0.00 3.02
372 373 2.959030 TCCGCTGCTCATATACTCTTGT 59.041 45.455 0.00 0.00 0.00 3.16
373 374 3.004839 TCCGCTGCTCATATACTCTTGTC 59.995 47.826 0.00 0.00 0.00 3.18
374 375 3.243535 CCGCTGCTCATATACTCTTGTCA 60.244 47.826 0.00 0.00 0.00 3.58
375 376 4.554292 CGCTGCTCATATACTCTTGTCAT 58.446 43.478 0.00 0.00 0.00 3.06
376 377 4.385146 CGCTGCTCATATACTCTTGTCATG 59.615 45.833 0.00 0.00 0.00 3.07
377 378 4.152045 GCTGCTCATATACTCTTGTCATGC 59.848 45.833 0.00 0.00 0.00 4.06
378 379 5.539979 CTGCTCATATACTCTTGTCATGCT 58.460 41.667 0.00 0.00 0.00 3.79
379 380 5.922053 TGCTCATATACTCTTGTCATGCTT 58.078 37.500 0.00 0.00 0.00 3.91
380 381 5.756833 TGCTCATATACTCTTGTCATGCTTG 59.243 40.000 0.00 0.00 0.00 4.01
381 382 5.333952 GCTCATATACTCTTGTCATGCTTGC 60.334 44.000 0.00 0.00 0.00 4.01
382 383 5.922053 TCATATACTCTTGTCATGCTTGCT 58.078 37.500 0.00 0.00 0.00 3.91
383 384 6.351711 TCATATACTCTTGTCATGCTTGCTT 58.648 36.000 0.00 0.00 0.00 3.91
384 385 4.959596 ATACTCTTGTCATGCTTGCTTG 57.040 40.909 2.58 2.58 0.00 4.01
385 386 2.854963 ACTCTTGTCATGCTTGCTTGA 58.145 42.857 7.03 7.03 0.00 3.02
386 387 3.418995 ACTCTTGTCATGCTTGCTTGAT 58.581 40.909 13.00 0.00 0.00 2.57
387 388 4.582869 ACTCTTGTCATGCTTGCTTGATA 58.417 39.130 13.00 8.67 0.00 2.15
388 389 5.191426 ACTCTTGTCATGCTTGCTTGATAT 58.809 37.500 13.00 0.00 0.00 1.63
389 390 5.066117 ACTCTTGTCATGCTTGCTTGATATG 59.934 40.000 13.00 12.24 0.00 1.78
390 391 4.945543 TCTTGTCATGCTTGCTTGATATGT 59.054 37.500 13.00 0.00 0.00 2.29
391 392 6.114767 TCTTGTCATGCTTGCTTGATATGTA 58.885 36.000 13.00 0.00 0.00 2.29
392 393 6.769341 TCTTGTCATGCTTGCTTGATATGTAT 59.231 34.615 13.00 0.00 0.00 2.29
393 394 6.947644 TGTCATGCTTGCTTGATATGTATT 57.052 33.333 13.00 0.00 0.00 1.89
394 395 6.731164 TGTCATGCTTGCTTGATATGTATTG 58.269 36.000 13.00 0.00 0.00 1.90
395 396 6.319405 TGTCATGCTTGCTTGATATGTATTGT 59.681 34.615 13.00 0.00 0.00 2.71
396 397 6.635641 GTCATGCTTGCTTGATATGTATTGTG 59.364 38.462 13.00 0.00 0.00 3.33
397 398 6.543100 TCATGCTTGCTTGATATGTATTGTGA 59.457 34.615 7.03 0.00 0.00 3.58
398 399 6.756299 TGCTTGCTTGATATGTATTGTGAA 57.244 33.333 0.00 0.00 0.00 3.18
399 400 7.337480 TGCTTGCTTGATATGTATTGTGAAT 57.663 32.000 0.00 0.00 0.00 2.57
400 401 7.197703 TGCTTGCTTGATATGTATTGTGAATG 58.802 34.615 0.00 0.00 0.00 2.67
401 402 7.148035 TGCTTGCTTGATATGTATTGTGAATGT 60.148 33.333 0.00 0.00 0.00 2.71
402 403 7.703621 GCTTGCTTGATATGTATTGTGAATGTT 59.296 33.333 0.00 0.00 0.00 2.71
413 414 8.346476 TGTATTGTGAATGTTAAAACTTGTGC 57.654 30.769 0.00 0.00 0.00 4.57
414 415 6.843069 ATTGTGAATGTTAAAACTTGTGCC 57.157 33.333 0.00 0.00 0.00 5.01
415 416 5.330455 TGTGAATGTTAAAACTTGTGCCA 57.670 34.783 0.00 0.00 0.00 4.92
416 417 5.724328 TGTGAATGTTAAAACTTGTGCCAA 58.276 33.333 0.00 0.00 0.00 4.52
417 418 6.166279 TGTGAATGTTAAAACTTGTGCCAAA 58.834 32.000 0.00 0.00 0.00 3.28
418 419 6.650807 TGTGAATGTTAAAACTTGTGCCAAAA 59.349 30.769 0.00 0.00 0.00 2.44
419 420 6.958752 GTGAATGTTAAAACTTGTGCCAAAAC 59.041 34.615 0.00 0.00 0.00 2.43
420 421 6.876257 TGAATGTTAAAACTTGTGCCAAAACT 59.124 30.769 0.00 0.00 0.00 2.66
421 422 6.902224 ATGTTAAAACTTGTGCCAAAACTC 57.098 33.333 0.00 0.00 0.00 3.01
422 423 5.172205 TGTTAAAACTTGTGCCAAAACTCC 58.828 37.500 0.00 0.00 0.00 3.85
423 424 3.971245 AAAACTTGTGCCAAAACTCCA 57.029 38.095 0.00 0.00 0.00 3.86
424 425 2.959507 AACTTGTGCCAAAACTCCAC 57.040 45.000 0.00 0.00 0.00 4.02
425 426 2.143876 ACTTGTGCCAAAACTCCACT 57.856 45.000 0.00 0.00 0.00 4.00
426 427 2.456577 ACTTGTGCCAAAACTCCACTT 58.543 42.857 0.00 0.00 0.00 3.16
427 428 2.427095 ACTTGTGCCAAAACTCCACTTC 59.573 45.455 0.00 0.00 0.00 3.01
428 429 2.136298 TGTGCCAAAACTCCACTTCA 57.864 45.000 0.00 0.00 0.00 3.02
429 430 2.451490 TGTGCCAAAACTCCACTTCAA 58.549 42.857 0.00 0.00 0.00 2.69
430 431 2.165437 TGTGCCAAAACTCCACTTCAAC 59.835 45.455 0.00 0.00 0.00 3.18
431 432 2.427095 GTGCCAAAACTCCACTTCAACT 59.573 45.455 0.00 0.00 0.00 3.16
432 433 3.096092 TGCCAAAACTCCACTTCAACTT 58.904 40.909 0.00 0.00 0.00 2.66
433 434 4.097286 GTGCCAAAACTCCACTTCAACTTA 59.903 41.667 0.00 0.00 0.00 2.24
434 435 4.707448 TGCCAAAACTCCACTTCAACTTAA 59.293 37.500 0.00 0.00 0.00 1.85
435 436 5.186021 TGCCAAAACTCCACTTCAACTTAAA 59.814 36.000 0.00 0.00 0.00 1.52
436 437 5.748630 GCCAAAACTCCACTTCAACTTAAAG 59.251 40.000 0.00 0.00 0.00 1.85
437 438 6.405397 GCCAAAACTCCACTTCAACTTAAAGA 60.405 38.462 0.00 0.00 0.00 2.52
438 439 7.196331 CCAAAACTCCACTTCAACTTAAAGAG 58.804 38.462 0.00 0.00 0.00 2.85
439 440 7.067008 CCAAAACTCCACTTCAACTTAAAGAGA 59.933 37.037 0.00 0.00 0.00 3.10
440 441 8.624776 CAAAACTCCACTTCAACTTAAAGAGAT 58.375 33.333 0.00 0.00 0.00 2.75
441 442 8.753497 AAACTCCACTTCAACTTAAAGAGATT 57.247 30.769 0.00 0.00 0.00 2.40
442 443 9.847224 AAACTCCACTTCAACTTAAAGAGATTA 57.153 29.630 0.00 0.00 0.00 1.75
443 444 9.847224 AACTCCACTTCAACTTAAAGAGATTAA 57.153 29.630 0.00 0.00 32.62 1.40
444 445 9.847224 ACTCCACTTCAACTTAAAGAGATTAAA 57.153 29.630 0.00 0.00 33.20 1.52
459 460 9.914131 AAAGAGATTAAAAATTGCACCTTAGTC 57.086 29.630 0.00 0.00 0.00 2.59
460 461 8.870075 AGAGATTAAAAATTGCACCTTAGTCT 57.130 30.769 0.00 0.00 0.00 3.24
461 462 9.959721 AGAGATTAAAAATTGCACCTTAGTCTA 57.040 29.630 0.00 0.00 0.00 2.59
468 469 7.640597 AAATTGCACCTTAGTCTATTAACCC 57.359 36.000 0.00 0.00 0.00 4.11
469 470 5.765576 TTGCACCTTAGTCTATTAACCCA 57.234 39.130 0.00 0.00 0.00 4.51
470 471 5.353394 TGCACCTTAGTCTATTAACCCAG 57.647 43.478 0.00 0.00 0.00 4.45
471 472 4.127907 GCACCTTAGTCTATTAACCCAGC 58.872 47.826 0.00 0.00 0.00 4.85
472 473 4.141688 GCACCTTAGTCTATTAACCCAGCT 60.142 45.833 0.00 0.00 0.00 4.24
473 474 5.602628 CACCTTAGTCTATTAACCCAGCTC 58.397 45.833 0.00 0.00 0.00 4.09
474 475 5.364157 CACCTTAGTCTATTAACCCAGCTCT 59.636 44.000 0.00 0.00 0.00 4.09
475 476 6.550108 CACCTTAGTCTATTAACCCAGCTCTA 59.450 42.308 0.00 0.00 0.00 2.43
476 477 6.778559 ACCTTAGTCTATTAACCCAGCTCTAG 59.221 42.308 0.00 0.00 0.00 2.43
477 478 7.005296 CCTTAGTCTATTAACCCAGCTCTAGA 58.995 42.308 0.00 0.00 0.00 2.43
478 479 7.040271 CCTTAGTCTATTAACCCAGCTCTAGAC 60.040 44.444 0.00 0.00 36.78 2.59
479 480 4.822896 AGTCTATTAACCCAGCTCTAGACG 59.177 45.833 0.00 0.00 39.83 4.18
480 481 2.892784 ATTAACCCAGCTCTAGACGC 57.107 50.000 6.17 6.17 0.00 5.19
481 482 0.822164 TTAACCCAGCTCTAGACGCC 59.178 55.000 9.65 0.00 0.00 5.68
482 483 0.033405 TAACCCAGCTCTAGACGCCT 60.033 55.000 9.65 0.00 0.00 5.52
483 484 1.324005 AACCCAGCTCTAGACGCCTC 61.324 60.000 9.65 0.00 0.00 4.70
484 485 1.454847 CCCAGCTCTAGACGCCTCT 60.455 63.158 9.65 0.00 0.00 3.69
485 486 1.040339 CCCAGCTCTAGACGCCTCTT 61.040 60.000 9.65 0.00 0.00 2.85
486 487 0.383949 CCAGCTCTAGACGCCTCTTC 59.616 60.000 9.65 0.00 0.00 2.87
487 488 1.388547 CAGCTCTAGACGCCTCTTCT 58.611 55.000 9.65 0.00 0.00 2.85
488 489 1.748493 CAGCTCTAGACGCCTCTTCTT 59.252 52.381 9.65 0.00 0.00 2.52
489 490 1.748493 AGCTCTAGACGCCTCTTCTTG 59.252 52.381 9.65 0.00 0.00 3.02
490 491 1.746220 GCTCTAGACGCCTCTTCTTGA 59.254 52.381 0.00 0.00 0.00 3.02
491 492 2.360801 GCTCTAGACGCCTCTTCTTGAT 59.639 50.000 0.00 0.00 0.00 2.57
492 493 3.550030 GCTCTAGACGCCTCTTCTTGATC 60.550 52.174 0.00 0.00 0.00 2.92
493 494 2.952978 TCTAGACGCCTCTTCTTGATCC 59.047 50.000 0.00 0.00 0.00 3.36
494 495 1.859302 AGACGCCTCTTCTTGATCCT 58.141 50.000 0.00 0.00 0.00 3.24
495 496 2.183679 AGACGCCTCTTCTTGATCCTT 58.816 47.619 0.00 0.00 0.00 3.36
496 497 2.569404 AGACGCCTCTTCTTGATCCTTT 59.431 45.455 0.00 0.00 0.00 3.11
497 498 2.933260 GACGCCTCTTCTTGATCCTTTC 59.067 50.000 0.00 0.00 0.00 2.62
498 499 2.303022 ACGCCTCTTCTTGATCCTTTCA 59.697 45.455 0.00 0.00 0.00 2.69
499 500 2.675348 CGCCTCTTCTTGATCCTTTCAC 59.325 50.000 0.00 0.00 32.84 3.18
500 501 3.679389 GCCTCTTCTTGATCCTTTCACA 58.321 45.455 0.00 0.00 32.84 3.58
501 502 4.074970 GCCTCTTCTTGATCCTTTCACAA 58.925 43.478 0.00 0.00 32.84 3.33
502 503 4.520492 GCCTCTTCTTGATCCTTTCACAAA 59.480 41.667 0.00 0.00 32.84 2.83
503 504 5.184671 GCCTCTTCTTGATCCTTTCACAAAT 59.815 40.000 0.00 0.00 32.84 2.32
504 505 6.375455 GCCTCTTCTTGATCCTTTCACAAATA 59.625 38.462 0.00 0.00 32.84 1.40
505 506 7.094205 GCCTCTTCTTGATCCTTTCACAAATAA 60.094 37.037 0.00 0.00 32.84 1.40
506 507 8.796475 CCTCTTCTTGATCCTTTCACAAATAAA 58.204 33.333 0.00 0.00 32.84 1.40
511 512 9.527157 TCTTGATCCTTTCACAAATAAATACCA 57.473 29.630 0.00 0.00 32.84 3.25
543 544 9.617523 ATCATTATTGAATGTACTGTCACATCA 57.382 29.630 0.00 0.00 42.71 3.07
544 545 9.617523 TCATTATTGAATGTACTGTCACATCAT 57.382 29.630 0.00 0.00 42.71 2.45
547 548 9.883142 TTATTGAATGTACTGTCACATCATACA 57.117 29.630 0.00 0.53 38.19 2.29
548 549 8.969260 ATTGAATGTACTGTCACATCATACAT 57.031 30.769 4.42 4.42 38.19 2.29
554 555 9.836864 ATGTACTGTCACATCATACATATTTGT 57.163 29.630 7.43 0.00 33.89 2.83
555 556 9.665719 TGTACTGTCACATCATACATATTTGTT 57.334 29.630 0.00 0.00 37.28 2.83
560 561 9.625747 TGTCACATCATACATATTTGTTATGGT 57.374 29.630 0.00 0.00 41.80 3.55
629 630 5.405331 GACTTCGGTCAAACCTAATATGC 57.595 43.478 0.00 0.00 43.91 3.14
630 631 4.839121 ACTTCGGTCAAACCTAATATGCA 58.161 39.130 0.00 0.00 35.66 3.96
631 632 4.876107 ACTTCGGTCAAACCTAATATGCAG 59.124 41.667 0.00 0.00 35.66 4.41
632 633 4.746535 TCGGTCAAACCTAATATGCAGA 57.253 40.909 0.00 0.00 35.66 4.26
633 634 4.693283 TCGGTCAAACCTAATATGCAGAG 58.307 43.478 0.00 0.00 35.66 3.35
634 635 4.161565 TCGGTCAAACCTAATATGCAGAGT 59.838 41.667 0.00 0.00 35.66 3.24
635 636 4.876107 CGGTCAAACCTAATATGCAGAGTT 59.124 41.667 0.00 0.00 35.66 3.01
636 637 6.046593 CGGTCAAACCTAATATGCAGAGTTA 58.953 40.000 0.00 0.00 35.66 2.24
637 638 6.537301 CGGTCAAACCTAATATGCAGAGTTAA 59.463 38.462 0.00 0.00 35.66 2.01
638 639 7.226720 CGGTCAAACCTAATATGCAGAGTTAAT 59.773 37.037 0.00 0.00 35.66 1.40
639 640 9.555727 GGTCAAACCTAATATGCAGAGTTAATA 57.444 33.333 0.00 0.00 34.73 0.98
646 647 9.878599 CCTAATATGCAGAGTTAATAAAAACGG 57.121 33.333 0.00 0.00 34.46 4.44
649 650 5.873179 TGCAGAGTTAATAAAAACGGAGG 57.127 39.130 0.00 0.00 34.46 4.30
650 651 4.698304 TGCAGAGTTAATAAAAACGGAGGG 59.302 41.667 0.00 0.00 34.46 4.30
651 652 4.939439 GCAGAGTTAATAAAAACGGAGGGA 59.061 41.667 0.00 0.00 34.46 4.20
652 653 5.064834 GCAGAGTTAATAAAAACGGAGGGAG 59.935 44.000 0.00 0.00 34.46 4.30
653 654 6.171213 CAGAGTTAATAAAAACGGAGGGAGT 58.829 40.000 0.00 0.00 34.46 3.85
654 655 7.325694 CAGAGTTAATAAAAACGGAGGGAGTA 58.674 38.462 0.00 0.00 34.46 2.59
655 656 7.277319 CAGAGTTAATAAAAACGGAGGGAGTAC 59.723 40.741 0.00 0.00 34.46 2.73
656 657 7.179872 AGAGTTAATAAAAACGGAGGGAGTACT 59.820 37.037 0.00 0.00 34.46 2.73
657 658 8.366359 AGTTAATAAAAACGGAGGGAGTACTA 57.634 34.615 0.00 0.00 34.46 1.82
658 659 8.473219 AGTTAATAAAAACGGAGGGAGTACTAG 58.527 37.037 0.00 0.00 34.46 2.57
659 660 6.864151 AATAAAAACGGAGGGAGTACTAGT 57.136 37.500 0.00 0.00 0.00 2.57
660 661 7.961326 AATAAAAACGGAGGGAGTACTAGTA 57.039 36.000 0.00 0.00 0.00 1.82
661 662 5.911378 AAAAACGGAGGGAGTACTAGTAG 57.089 43.478 1.87 0.00 0.00 2.57
662 663 4.582973 AAACGGAGGGAGTACTAGTAGT 57.417 45.455 10.09 10.09 0.00 2.73
663 664 4.582973 AACGGAGGGAGTACTAGTAGTT 57.417 45.455 8.40 3.29 0.00 2.24
664 665 5.700402 AACGGAGGGAGTACTAGTAGTTA 57.300 43.478 8.40 0.00 0.00 2.24
665 666 5.029807 ACGGAGGGAGTACTAGTAGTTAC 57.970 47.826 8.40 7.98 0.00 2.50
666 667 4.719273 ACGGAGGGAGTACTAGTAGTTACT 59.281 45.833 8.40 12.04 40.24 2.24
667 668 5.900123 ACGGAGGGAGTACTAGTAGTTACTA 59.100 44.000 8.40 0.00 37.73 1.82
683 684 8.865590 GTAGTTACTAGTACTACTCGCTAGTT 57.134 38.462 22.32 2.03 41.62 2.24
684 685 7.769272 AGTTACTAGTACTACTCGCTAGTTG 57.231 40.000 0.91 0.00 41.62 3.16
685 686 6.257630 AGTTACTAGTACTACTCGCTAGTTGC 59.742 42.308 0.91 3.62 41.62 4.17
686 687 4.768583 ACTAGTACTACTCGCTAGTTGCT 58.231 43.478 0.00 0.00 41.62 3.91
687 688 5.184711 ACTAGTACTACTCGCTAGTTGCTT 58.815 41.667 0.00 0.00 41.62 3.91
688 689 6.344500 ACTAGTACTACTCGCTAGTTGCTTA 58.656 40.000 0.00 0.00 41.62 3.09
689 690 5.738118 AGTACTACTCGCTAGTTGCTTAG 57.262 43.478 0.00 0.00 36.95 2.18
690 691 3.423996 ACTACTCGCTAGTTGCTTAGC 57.576 47.619 0.00 0.00 42.05 3.09
691 692 2.099427 ACTACTCGCTAGTTGCTTAGCC 59.901 50.000 0.29 0.00 42.41 3.93
692 693 0.179134 ACTCGCTAGTTGCTTAGCCG 60.179 55.000 0.29 0.00 42.41 5.52
693 694 0.100682 CTCGCTAGTTGCTTAGCCGA 59.899 55.000 0.29 1.12 42.41 5.54
694 695 0.528924 TCGCTAGTTGCTTAGCCGAA 59.471 50.000 0.29 0.00 42.41 4.30
695 696 1.136305 TCGCTAGTTGCTTAGCCGAAT 59.864 47.619 0.29 0.00 42.41 3.34
696 697 1.523095 CGCTAGTTGCTTAGCCGAATC 59.477 52.381 0.29 0.00 42.41 2.52
697 698 2.550978 GCTAGTTGCTTAGCCGAATCA 58.449 47.619 0.29 0.00 40.10 2.57
698 699 2.285488 GCTAGTTGCTTAGCCGAATCAC 59.715 50.000 0.29 0.00 40.10 3.06
699 700 1.739067 AGTTGCTTAGCCGAATCACC 58.261 50.000 0.29 0.00 0.00 4.02
700 701 1.279271 AGTTGCTTAGCCGAATCACCT 59.721 47.619 0.29 0.00 0.00 4.00
701 702 2.500098 AGTTGCTTAGCCGAATCACCTA 59.500 45.455 0.29 0.00 0.00 3.08
702 703 2.866762 GTTGCTTAGCCGAATCACCTAG 59.133 50.000 0.29 0.00 0.00 3.02
719 720 3.206150 CCTAGCACGGAGTTAATTGCAT 58.794 45.455 0.00 0.00 41.61 3.96
728 729 6.533723 CACGGAGTTAATTGCATAGAAGTACA 59.466 38.462 0.00 0.00 41.61 2.90
842 844 7.450627 GCTAAACGCCTATTTATACGTATTGG 58.549 38.462 14.33 9.54 37.87 3.16
848 850 2.616634 TTTATACGTATTGGCGCCCA 57.383 45.000 26.77 15.07 34.88 5.36
862 864 2.892640 CCCAATCCGACAGCTCGA 59.107 61.111 0.00 0.00 43.06 4.04
965 1008 4.254709 TGCGCTGCAACCTGGTCT 62.255 61.111 9.73 0.00 34.76 3.85
1013 1060 2.277126 ATTCCCCTCCCCTCCTCCTG 62.277 65.000 0.00 0.00 0.00 3.86
1032 1082 1.080705 CTCGCTCGTTTCCTCCGTT 60.081 57.895 0.00 0.00 0.00 4.44
1147 1208 3.470709 CGTACATGCATTCTTCCTCCAT 58.529 45.455 0.00 0.00 0.00 3.41
1226 1296 4.759516 TTGGTTGATTTCGCTAGGTTTC 57.240 40.909 0.00 0.00 0.00 2.78
1245 1315 4.599047 TTCGATTTGGCCATTGTCTTTT 57.401 36.364 6.09 0.00 0.00 2.27
1692 1811 0.108233 CTCAAGTGGCTGCTCCTCTC 60.108 60.000 0.00 0.00 37.69 3.20
1723 1842 9.461312 AATGTAGTGGTCTGATGCTAAATTTAA 57.539 29.630 0.00 0.00 0.00 1.52
1783 1911 5.835113 ACTTGCTGTATGAACTGTTTTGT 57.165 34.783 0.00 0.00 0.00 2.83
1784 1912 6.207691 ACTTGCTGTATGAACTGTTTTGTT 57.792 33.333 0.00 0.00 0.00 2.83
1785 1913 6.035843 ACTTGCTGTATGAACTGTTTTGTTG 58.964 36.000 0.00 0.00 0.00 3.33
1786 1914 5.574891 TGCTGTATGAACTGTTTTGTTGT 57.425 34.783 0.00 0.00 0.00 3.32
1787 1915 5.960113 TGCTGTATGAACTGTTTTGTTGTT 58.040 33.333 0.00 0.00 0.00 2.83
1788 1916 5.804473 TGCTGTATGAACTGTTTTGTTGTTG 59.196 36.000 0.00 0.00 0.00 3.33
1789 1917 5.804979 GCTGTATGAACTGTTTTGTTGTTGT 59.195 36.000 0.00 0.00 0.00 3.32
1790 1918 6.310224 GCTGTATGAACTGTTTTGTTGTTGTT 59.690 34.615 0.00 0.00 0.00 2.83
1791 1919 7.573916 TGTATGAACTGTTTTGTTGTTGTTG 57.426 32.000 0.00 0.00 0.00 3.33
1792 1920 7.148641 TGTATGAACTGTTTTGTTGTTGTTGT 58.851 30.769 0.00 0.00 0.00 3.32
1793 1921 7.653713 TGTATGAACTGTTTTGTTGTTGTTGTT 59.346 29.630 0.00 0.00 0.00 2.83
1794 1922 6.279227 TGAACTGTTTTGTTGTTGTTGTTG 57.721 33.333 0.00 0.00 0.00 3.33
1863 1991 4.489771 GATCACCAGTGGCCCCCG 62.490 72.222 9.78 0.00 0.00 5.73
1932 2060 3.826157 CCAAAAGTGCTAGGGTGAATGAA 59.174 43.478 0.00 0.00 0.00 2.57
2100 2228 4.747931 GCCATTACATATCAGCAGGAGGTT 60.748 45.833 0.00 0.00 0.00 3.50
2331 2459 4.142049 GCAGAGCTAACTAAGTGTCAGGAT 60.142 45.833 0.00 0.00 0.00 3.24
2379 2507 2.875094 AGCTTCAGGTTGCTGATCTT 57.125 45.000 0.00 0.00 38.21 2.40
2397 2525 8.473219 GCTGATCTTCTTAAGGGAAATGAAAAT 58.527 33.333 1.85 0.00 0.00 1.82
3149 3303 1.269723 GTTGCACCTTTAAGCCTCCAC 59.730 52.381 0.00 0.00 0.00 4.02
3184 3338 0.252881 TCCCCAATGAGCTCACTCCT 60.253 55.000 20.97 0.00 42.74 3.69
3189 3343 3.618351 CCAATGAGCTCACTCCTGAATT 58.382 45.455 20.97 3.56 42.74 2.17
3340 3495 4.260985 CAACACTAACCATAGCATCCACA 58.739 43.478 0.00 0.00 31.96 4.17
3453 3608 2.643551 CTCGTATGCCATTGGGTTCTT 58.356 47.619 4.53 0.00 36.17 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 106 2.238646 TCATCGCCCACAAAGGACTTAT 59.761 45.455 0.00 0.00 41.22 1.73
106 107 1.626321 TCATCGCCCACAAAGGACTTA 59.374 47.619 0.00 0.00 41.22 2.24
115 116 2.271821 CCATGGTCATCGCCCACA 59.728 61.111 2.57 0.00 34.07 4.17
149 150 1.014564 CGAAGGGTCCACGAAGAAGC 61.015 60.000 0.00 0.00 0.00 3.86
150 151 0.317479 ACGAAGGGTCCACGAAGAAG 59.683 55.000 11.86 0.00 0.00 2.85
151 152 0.032952 CACGAAGGGTCCACGAAGAA 59.967 55.000 11.86 0.00 0.00 2.52
152 153 1.663739 CACGAAGGGTCCACGAAGA 59.336 57.895 11.86 0.00 0.00 2.87
153 154 1.374252 CCACGAAGGGTCCACGAAG 60.374 63.158 11.86 5.69 0.00 3.79
154 155 2.738480 CCACGAAGGGTCCACGAA 59.262 61.111 11.86 0.00 0.00 3.85
171 172 3.319198 TCCACGAAGGGCTCCACC 61.319 66.667 0.00 0.00 38.24 4.61
172 173 2.047179 GTCCACGAAGGGCTCCAC 60.047 66.667 0.00 0.00 39.61 4.02
179 180 4.717629 TGCGCGAGTCCACGAAGG 62.718 66.667 12.10 0.00 39.47 3.46
180 181 2.733218 TTGCGCGAGTCCACGAAG 60.733 61.111 12.10 0.00 35.09 3.79
181 182 3.033764 GTTGCGCGAGTCCACGAA 61.034 61.111 12.10 0.00 35.09 3.85
184 185 0.947180 TAAAGGTTGCGCGAGTCCAC 60.947 55.000 12.10 0.00 0.00 4.02
185 186 0.947180 GTAAAGGTTGCGCGAGTCCA 60.947 55.000 12.10 0.00 0.00 4.02
186 187 1.632948 GGTAAAGGTTGCGCGAGTCC 61.633 60.000 12.10 8.15 0.00 3.85
187 188 1.632948 GGGTAAAGGTTGCGCGAGTC 61.633 60.000 12.10 0.00 0.00 3.36
188 189 1.670083 GGGTAAAGGTTGCGCGAGT 60.670 57.895 12.10 0.00 0.00 4.18
189 190 0.953960 AAGGGTAAAGGTTGCGCGAG 60.954 55.000 12.10 0.00 33.57 5.03
190 191 0.535553 AAAGGGTAAAGGTTGCGCGA 60.536 50.000 12.10 0.00 33.57 5.87
191 192 0.386731 CAAAGGGTAAAGGTTGCGCG 60.387 55.000 0.00 0.00 33.57 6.86
192 193 0.671796 ACAAAGGGTAAAGGTTGCGC 59.328 50.000 0.00 0.00 0.00 6.09
193 194 1.000717 CCACAAAGGGTAAAGGTTGCG 60.001 52.381 0.00 0.00 0.00 4.85
194 195 2.812358 CCACAAAGGGTAAAGGTTGC 57.188 50.000 0.00 0.00 0.00 4.17
205 206 2.230660 GGAGACTTCAACCCACAAAGG 58.769 52.381 0.00 0.00 37.03 3.11
206 207 2.930950 TGGAGACTTCAACCCACAAAG 58.069 47.619 0.00 0.00 0.00 2.77
207 208 3.117701 TGATGGAGACTTCAACCCACAAA 60.118 43.478 0.00 0.00 41.09 2.83
208 209 2.441375 TGATGGAGACTTCAACCCACAA 59.559 45.455 0.00 0.00 41.09 3.33
209 210 2.054021 TGATGGAGACTTCAACCCACA 58.946 47.619 0.00 0.00 41.09 4.17
210 211 2.859165 TGATGGAGACTTCAACCCAC 57.141 50.000 0.00 0.00 41.09 4.61
216 217 1.967779 TCCACGTTGATGGAGACTTCA 59.032 47.619 0.00 0.00 44.14 3.02
217 218 2.743636 TCCACGTTGATGGAGACTTC 57.256 50.000 0.00 0.00 44.14 3.01
224 225 2.287393 TCGTACATCCACGTTGATGG 57.713 50.000 27.50 14.01 45.16 3.51
225 226 3.425525 GCTATCGTACATCCACGTTGATG 59.574 47.826 23.87 23.87 46.10 3.07
226 227 3.067601 TGCTATCGTACATCCACGTTGAT 59.932 43.478 0.00 0.00 42.51 2.57
227 228 2.424246 TGCTATCGTACATCCACGTTGA 59.576 45.455 0.00 0.00 42.51 3.18
228 229 2.534349 GTGCTATCGTACATCCACGTTG 59.466 50.000 0.00 0.00 42.51 4.10
229 230 2.480759 GGTGCTATCGTACATCCACGTT 60.481 50.000 0.00 0.00 42.51 3.99
230 231 1.066605 GGTGCTATCGTACATCCACGT 59.933 52.381 0.00 0.00 42.51 4.49
231 232 1.066454 TGGTGCTATCGTACATCCACG 59.934 52.381 0.00 0.00 43.28 4.94
232 233 2.470821 GTGGTGCTATCGTACATCCAC 58.529 52.381 0.00 0.00 37.33 4.02
233 234 1.411246 GGTGGTGCTATCGTACATCCA 59.589 52.381 0.00 0.00 0.00 3.41
234 235 1.687123 AGGTGGTGCTATCGTACATCC 59.313 52.381 0.00 0.00 0.00 3.51
235 236 4.672024 CGATAGGTGGTGCTATCGTACATC 60.672 50.000 3.96 0.00 45.51 3.06
236 237 3.190744 CGATAGGTGGTGCTATCGTACAT 59.809 47.826 3.96 0.00 45.51 2.29
237 238 2.551032 CGATAGGTGGTGCTATCGTACA 59.449 50.000 3.96 0.00 45.51 2.90
238 239 3.198863 CGATAGGTGGTGCTATCGTAC 57.801 52.381 3.96 0.00 45.51 3.67
242 243 3.181469 TGGTTTCGATAGGTGGTGCTATC 60.181 47.826 0.00 0.00 0.00 2.08
243 244 2.769663 TGGTTTCGATAGGTGGTGCTAT 59.230 45.455 0.00 0.00 0.00 2.97
244 245 2.093869 GTGGTTTCGATAGGTGGTGCTA 60.094 50.000 0.00 0.00 0.00 3.49
245 246 0.981183 TGGTTTCGATAGGTGGTGCT 59.019 50.000 0.00 0.00 0.00 4.40
246 247 1.084289 GTGGTTTCGATAGGTGGTGC 58.916 55.000 0.00 0.00 0.00 5.01
247 248 1.355971 CGTGGTTTCGATAGGTGGTG 58.644 55.000 0.00 0.00 0.00 4.17
248 249 0.248289 CCGTGGTTTCGATAGGTGGT 59.752 55.000 0.00 0.00 0.00 4.16
249 250 0.533491 TCCGTGGTTTCGATAGGTGG 59.467 55.000 0.00 0.00 0.00 4.61
250 251 2.596904 ATCCGTGGTTTCGATAGGTG 57.403 50.000 0.00 0.00 0.00 4.00
251 252 4.741321 TTTATCCGTGGTTTCGATAGGT 57.259 40.909 0.00 0.00 0.00 3.08
271 272 7.021196 CACAATTTCGAGACACCGATATTTTT 58.979 34.615 0.00 0.00 37.84 1.94
272 273 6.148811 ACACAATTTCGAGACACCGATATTTT 59.851 34.615 0.00 0.00 37.84 1.82
273 274 5.642063 ACACAATTTCGAGACACCGATATTT 59.358 36.000 0.00 0.00 37.84 1.40
274 275 5.175859 ACACAATTTCGAGACACCGATATT 58.824 37.500 0.00 0.00 39.52 1.28
275 276 4.755411 ACACAATTTCGAGACACCGATAT 58.245 39.130 0.00 0.00 38.45 1.63
276 277 4.182693 ACACAATTTCGAGACACCGATA 57.817 40.909 0.00 0.00 38.45 2.92
277 278 3.040147 ACACAATTTCGAGACACCGAT 57.960 42.857 0.00 0.00 38.45 4.18
278 279 2.519377 ACACAATTTCGAGACACCGA 57.481 45.000 0.00 0.00 36.70 4.69
279 280 3.288242 CAAACACAATTTCGAGACACCG 58.712 45.455 0.00 0.00 0.00 4.94
280 281 3.042887 GCAAACACAATTTCGAGACACC 58.957 45.455 0.00 0.00 0.00 4.16
281 282 3.482110 GTGCAAACACAATTTCGAGACAC 59.518 43.478 0.00 0.00 46.61 3.67
282 283 3.690422 GTGCAAACACAATTTCGAGACA 58.310 40.909 0.00 0.00 46.61 3.41
295 296 1.327303 GGGATTGGAGTGTGCAAACA 58.673 50.000 10.29 0.00 29.75 2.83
296 297 1.327303 TGGGATTGGAGTGTGCAAAC 58.673 50.000 0.00 0.00 29.75 2.93
297 298 2.170166 GATGGGATTGGAGTGTGCAAA 58.830 47.619 0.00 0.00 29.75 3.68
298 299 1.616725 GGATGGGATTGGAGTGTGCAA 60.617 52.381 0.00 0.00 30.73 4.08
299 300 0.034186 GGATGGGATTGGAGTGTGCA 60.034 55.000 0.00 0.00 0.00 4.57
300 301 0.753111 GGGATGGGATTGGAGTGTGC 60.753 60.000 0.00 0.00 0.00 4.57
301 302 0.921896 AGGGATGGGATTGGAGTGTG 59.078 55.000 0.00 0.00 0.00 3.82
302 303 1.686236 AAGGGATGGGATTGGAGTGT 58.314 50.000 0.00 0.00 0.00 3.55
303 304 2.834638 AAAGGGATGGGATTGGAGTG 57.165 50.000 0.00 0.00 0.00 3.51
304 305 3.197983 TGTAAAGGGATGGGATTGGAGT 58.802 45.455 0.00 0.00 0.00 3.85
305 306 3.951563 TGTAAAGGGATGGGATTGGAG 57.048 47.619 0.00 0.00 0.00 3.86
306 307 4.482025 AGAATGTAAAGGGATGGGATTGGA 59.518 41.667 0.00 0.00 0.00 3.53
307 308 4.808042 AGAATGTAAAGGGATGGGATTGG 58.192 43.478 0.00 0.00 0.00 3.16
308 309 5.452356 GCAAGAATGTAAAGGGATGGGATTG 60.452 44.000 0.00 0.00 0.00 2.67
309 310 4.651045 GCAAGAATGTAAAGGGATGGGATT 59.349 41.667 0.00 0.00 0.00 3.01
310 311 4.218312 GCAAGAATGTAAAGGGATGGGAT 58.782 43.478 0.00 0.00 0.00 3.85
311 312 3.011144 TGCAAGAATGTAAAGGGATGGGA 59.989 43.478 0.00 0.00 0.00 4.37
312 313 3.364549 TGCAAGAATGTAAAGGGATGGG 58.635 45.455 0.00 0.00 0.00 4.00
313 314 5.603170 ATTGCAAGAATGTAAAGGGATGG 57.397 39.130 4.94 0.00 34.73 3.51
314 315 6.183360 GCAAATTGCAAGAATGTAAAGGGATG 60.183 38.462 13.73 0.00 44.26 3.51
315 316 5.876460 GCAAATTGCAAGAATGTAAAGGGAT 59.124 36.000 13.73 0.00 44.26 3.85
316 317 5.237048 GCAAATTGCAAGAATGTAAAGGGA 58.763 37.500 13.73 0.00 44.26 4.20
317 318 5.535043 GCAAATTGCAAGAATGTAAAGGG 57.465 39.130 13.73 0.00 44.26 3.95
331 332 4.434593 CGGAAAGTAAAGCATGCAAATTGC 60.435 41.667 21.98 11.58 45.29 3.56
332 333 4.434593 GCGGAAAGTAAAGCATGCAAATTG 60.435 41.667 21.98 0.60 0.00 2.32
333 334 3.679502 GCGGAAAGTAAAGCATGCAAATT 59.320 39.130 21.98 13.96 0.00 1.82
334 335 3.056607 AGCGGAAAGTAAAGCATGCAAAT 60.057 39.130 21.98 7.81 0.00 2.32
335 336 2.295909 AGCGGAAAGTAAAGCATGCAAA 59.704 40.909 21.98 0.90 0.00 3.68
336 337 1.885887 AGCGGAAAGTAAAGCATGCAA 59.114 42.857 21.98 1.32 0.00 4.08
337 338 1.199789 CAGCGGAAAGTAAAGCATGCA 59.800 47.619 21.98 0.00 0.00 3.96
338 339 1.900237 CAGCGGAAAGTAAAGCATGC 58.100 50.000 10.51 10.51 0.00 4.06
339 340 1.470098 AGCAGCGGAAAGTAAAGCATG 59.530 47.619 0.00 0.00 0.00 4.06
340 341 1.740025 GAGCAGCGGAAAGTAAAGCAT 59.260 47.619 0.00 0.00 0.00 3.79
341 342 1.156736 GAGCAGCGGAAAGTAAAGCA 58.843 50.000 0.00 0.00 0.00 3.91
342 343 1.156736 TGAGCAGCGGAAAGTAAAGC 58.843 50.000 0.00 0.00 0.00 3.51
343 344 5.986135 AGTATATGAGCAGCGGAAAGTAAAG 59.014 40.000 0.00 0.00 0.00 1.85
344 345 5.914033 AGTATATGAGCAGCGGAAAGTAAA 58.086 37.500 0.00 0.00 0.00 2.01
345 346 5.302059 AGAGTATATGAGCAGCGGAAAGTAA 59.698 40.000 0.00 0.00 0.00 2.24
346 347 4.827835 AGAGTATATGAGCAGCGGAAAGTA 59.172 41.667 0.00 0.00 0.00 2.24
347 348 3.639094 AGAGTATATGAGCAGCGGAAAGT 59.361 43.478 0.00 0.00 0.00 2.66
348 349 4.250116 AGAGTATATGAGCAGCGGAAAG 57.750 45.455 0.00 0.00 0.00 2.62
349 350 4.141937 ACAAGAGTATATGAGCAGCGGAAA 60.142 41.667 0.00 0.00 0.00 3.13
350 351 3.384789 ACAAGAGTATATGAGCAGCGGAA 59.615 43.478 0.00 0.00 0.00 4.30
351 352 2.959030 ACAAGAGTATATGAGCAGCGGA 59.041 45.455 0.00 0.00 0.00 5.54
352 353 3.243535 TGACAAGAGTATATGAGCAGCGG 60.244 47.826 0.00 0.00 0.00 5.52
353 354 3.969899 TGACAAGAGTATATGAGCAGCG 58.030 45.455 0.00 0.00 0.00 5.18
354 355 4.152045 GCATGACAAGAGTATATGAGCAGC 59.848 45.833 0.00 0.00 0.00 5.25
355 356 5.539979 AGCATGACAAGAGTATATGAGCAG 58.460 41.667 0.00 0.00 0.00 4.24
356 357 5.541953 AGCATGACAAGAGTATATGAGCA 57.458 39.130 0.00 0.00 0.00 4.26
357 358 5.333952 GCAAGCATGACAAGAGTATATGAGC 60.334 44.000 0.00 0.00 0.00 4.26
358 359 5.990386 AGCAAGCATGACAAGAGTATATGAG 59.010 40.000 0.00 0.00 0.00 2.90
359 360 5.922053 AGCAAGCATGACAAGAGTATATGA 58.078 37.500 0.00 0.00 0.00 2.15
360 361 6.259387 TCAAGCAAGCATGACAAGAGTATATG 59.741 38.462 0.00 0.00 0.00 1.78
361 362 6.351711 TCAAGCAAGCATGACAAGAGTATAT 58.648 36.000 0.00 0.00 0.00 0.86
362 363 5.733676 TCAAGCAAGCATGACAAGAGTATA 58.266 37.500 0.00 0.00 0.00 1.47
363 364 4.582869 TCAAGCAAGCATGACAAGAGTAT 58.417 39.130 0.00 0.00 0.00 2.12
364 365 4.006780 TCAAGCAAGCATGACAAGAGTA 57.993 40.909 0.00 0.00 0.00 2.59
365 366 2.854963 TCAAGCAAGCATGACAAGAGT 58.145 42.857 0.00 0.00 0.00 3.24
366 367 5.066117 ACATATCAAGCAAGCATGACAAGAG 59.934 40.000 1.76 0.00 0.00 2.85
367 368 4.945543 ACATATCAAGCAAGCATGACAAGA 59.054 37.500 1.76 0.00 0.00 3.02
368 369 5.244785 ACATATCAAGCAAGCATGACAAG 57.755 39.130 1.76 0.00 0.00 3.16
369 370 6.947644 ATACATATCAAGCAAGCATGACAA 57.052 33.333 1.76 0.00 0.00 3.18
370 371 6.319405 ACAATACATATCAAGCAAGCATGACA 59.681 34.615 1.76 0.00 0.00 3.58
371 372 6.635641 CACAATACATATCAAGCAAGCATGAC 59.364 38.462 1.76 0.00 0.00 3.06
372 373 6.543100 TCACAATACATATCAAGCAAGCATGA 59.457 34.615 2.25 2.25 0.00 3.07
373 374 6.731164 TCACAATACATATCAAGCAAGCATG 58.269 36.000 0.00 0.00 0.00 4.06
374 375 6.947644 TCACAATACATATCAAGCAAGCAT 57.052 33.333 0.00 0.00 0.00 3.79
375 376 6.756299 TTCACAATACATATCAAGCAAGCA 57.244 33.333 0.00 0.00 0.00 3.91
376 377 7.198390 ACATTCACAATACATATCAAGCAAGC 58.802 34.615 0.00 0.00 0.00 4.01
387 388 8.977505 GCACAAGTTTTAACATTCACAATACAT 58.022 29.630 0.00 0.00 0.00 2.29
388 389 7.436673 GGCACAAGTTTTAACATTCACAATACA 59.563 33.333 0.00 0.00 0.00 2.29
389 390 7.436673 TGGCACAAGTTTTAACATTCACAATAC 59.563 33.333 0.00 0.00 31.92 1.89
390 391 7.492524 TGGCACAAGTTTTAACATTCACAATA 58.507 30.769 0.00 0.00 31.92 1.90
391 392 6.344500 TGGCACAAGTTTTAACATTCACAAT 58.656 32.000 0.00 0.00 31.92 2.71
392 393 5.724328 TGGCACAAGTTTTAACATTCACAA 58.276 33.333 0.00 0.00 31.92 3.33
393 394 5.330455 TGGCACAAGTTTTAACATTCACA 57.670 34.783 0.00 0.00 31.92 3.58
409 410 2.136298 TGAAGTGGAGTTTTGGCACA 57.864 45.000 0.00 0.00 0.00 4.57
410 411 2.427095 AGTTGAAGTGGAGTTTTGGCAC 59.573 45.455 0.00 0.00 0.00 5.01
411 412 2.733956 AGTTGAAGTGGAGTTTTGGCA 58.266 42.857 0.00 0.00 0.00 4.92
412 413 3.801114 AAGTTGAAGTGGAGTTTTGGC 57.199 42.857 0.00 0.00 0.00 4.52
413 414 7.067008 TCTCTTTAAGTTGAAGTGGAGTTTTGG 59.933 37.037 7.22 0.00 0.00 3.28
414 415 7.985476 TCTCTTTAAGTTGAAGTGGAGTTTTG 58.015 34.615 7.22 0.00 0.00 2.44
415 416 8.753497 ATCTCTTTAAGTTGAAGTGGAGTTTT 57.247 30.769 7.22 0.00 0.00 2.43
416 417 8.753497 AATCTCTTTAAGTTGAAGTGGAGTTT 57.247 30.769 7.22 0.00 0.00 2.66
417 418 9.847224 TTAATCTCTTTAAGTTGAAGTGGAGTT 57.153 29.630 7.22 4.84 0.00 3.01
418 419 9.847224 TTTAATCTCTTTAAGTTGAAGTGGAGT 57.153 29.630 7.22 8.54 31.57 3.85
433 434 9.914131 GACTAAGGTGCAATTTTTAATCTCTTT 57.086 29.630 0.00 0.00 0.00 2.52
434 435 9.301897 AGACTAAGGTGCAATTTTTAATCTCTT 57.698 29.630 0.00 0.00 0.00 2.85
435 436 8.870075 AGACTAAGGTGCAATTTTTAATCTCT 57.130 30.769 0.00 0.00 0.00 3.10
442 443 8.528643 GGGTTAATAGACTAAGGTGCAATTTTT 58.471 33.333 0.00 0.00 0.00 1.94
443 444 7.672239 TGGGTTAATAGACTAAGGTGCAATTTT 59.328 33.333 0.00 0.00 0.00 1.82
444 445 7.179269 TGGGTTAATAGACTAAGGTGCAATTT 58.821 34.615 0.00 0.00 0.00 1.82
445 446 6.727394 TGGGTTAATAGACTAAGGTGCAATT 58.273 36.000 0.00 0.00 0.00 2.32
446 447 6.321821 TGGGTTAATAGACTAAGGTGCAAT 57.678 37.500 0.00 0.00 0.00 3.56
447 448 5.741011 CTGGGTTAATAGACTAAGGTGCAA 58.259 41.667 0.00 0.00 0.00 4.08
448 449 4.383770 GCTGGGTTAATAGACTAAGGTGCA 60.384 45.833 0.00 0.00 0.00 4.57
449 450 4.127907 GCTGGGTTAATAGACTAAGGTGC 58.872 47.826 0.00 0.00 0.00 5.01
450 451 5.364157 AGAGCTGGGTTAATAGACTAAGGTG 59.636 44.000 0.00 0.00 0.00 4.00
451 452 5.530243 AGAGCTGGGTTAATAGACTAAGGT 58.470 41.667 0.00 0.00 0.00 3.50
452 453 7.005296 TCTAGAGCTGGGTTAATAGACTAAGG 58.995 42.308 0.00 0.00 0.00 2.69
453 454 7.308109 CGTCTAGAGCTGGGTTAATAGACTAAG 60.308 44.444 0.00 0.00 37.86 2.18
454 455 6.485984 CGTCTAGAGCTGGGTTAATAGACTAA 59.514 42.308 0.00 0.00 37.86 2.24
455 456 5.996513 CGTCTAGAGCTGGGTTAATAGACTA 59.003 44.000 0.00 0.00 37.86 2.59
456 457 4.822896 CGTCTAGAGCTGGGTTAATAGACT 59.177 45.833 0.00 0.00 37.86 3.24
457 458 4.557097 GCGTCTAGAGCTGGGTTAATAGAC 60.557 50.000 0.00 0.00 37.07 2.59
458 459 3.568853 GCGTCTAGAGCTGGGTTAATAGA 59.431 47.826 0.00 0.00 0.00 1.98
459 460 3.305471 GGCGTCTAGAGCTGGGTTAATAG 60.305 52.174 12.09 0.00 34.52 1.73
460 461 2.626743 GGCGTCTAGAGCTGGGTTAATA 59.373 50.000 12.09 0.00 34.52 0.98
461 462 1.413077 GGCGTCTAGAGCTGGGTTAAT 59.587 52.381 12.09 0.00 34.52 1.40
462 463 0.822164 GGCGTCTAGAGCTGGGTTAA 59.178 55.000 12.09 0.00 34.52 2.01
463 464 0.033405 AGGCGTCTAGAGCTGGGTTA 60.033 55.000 12.09 0.00 34.52 2.85
464 465 1.305381 AGGCGTCTAGAGCTGGGTT 60.305 57.895 12.09 0.00 34.52 4.11
465 466 1.755008 GAGGCGTCTAGAGCTGGGT 60.755 63.158 12.09 0.00 34.52 4.51
466 467 1.040339 AAGAGGCGTCTAGAGCTGGG 61.040 60.000 9.76 0.00 30.45 4.45
467 468 0.383949 GAAGAGGCGTCTAGAGCTGG 59.616 60.000 9.76 0.00 30.45 4.85
468 469 1.388547 AGAAGAGGCGTCTAGAGCTG 58.611 55.000 9.76 0.00 30.45 4.24
469 470 1.748493 CAAGAAGAGGCGTCTAGAGCT 59.252 52.381 9.76 2.60 30.45 4.09
470 471 1.746220 TCAAGAAGAGGCGTCTAGAGC 59.254 52.381 9.76 0.00 30.45 4.09
471 472 3.004315 GGATCAAGAAGAGGCGTCTAGAG 59.996 52.174 9.76 0.90 30.45 2.43
472 473 2.952978 GGATCAAGAAGAGGCGTCTAGA 59.047 50.000 9.76 6.33 30.45 2.43
473 474 2.955660 AGGATCAAGAAGAGGCGTCTAG 59.044 50.000 9.76 0.91 30.45 2.43
474 475 3.019799 AGGATCAAGAAGAGGCGTCTA 57.980 47.619 9.76 0.00 30.45 2.59
475 476 1.859302 AGGATCAAGAAGAGGCGTCT 58.141 50.000 2.32 2.32 32.81 4.18
476 477 2.682155 AAGGATCAAGAAGAGGCGTC 57.318 50.000 0.00 0.00 0.00 5.19
477 478 2.303022 TGAAAGGATCAAGAAGAGGCGT 59.697 45.455 0.00 0.00 34.30 5.68
478 479 2.675348 GTGAAAGGATCAAGAAGAGGCG 59.325 50.000 0.00 0.00 40.50 5.52
479 480 3.679389 TGTGAAAGGATCAAGAAGAGGC 58.321 45.455 0.00 0.00 40.50 4.70
480 481 6.830873 ATTTGTGAAAGGATCAAGAAGAGG 57.169 37.500 0.00 0.00 40.50 3.69
485 486 9.527157 TGGTATTTATTTGTGAAAGGATCAAGA 57.473 29.630 0.00 0.00 40.50 3.02
517 518 9.617523 TGATGTGACAGTACATTCAATAATGAT 57.382 29.630 5.18 0.00 44.50 2.45
518 519 9.617523 ATGATGTGACAGTACATTCAATAATGA 57.382 29.630 5.18 0.00 44.50 2.57
521 522 9.883142 TGTATGATGTGACAGTACATTCAATAA 57.117 29.630 7.69 0.00 41.15 1.40
523 524 8.969260 ATGTATGATGTGACAGTACATTCAAT 57.031 30.769 12.39 0.00 41.15 2.57
528 529 9.836864 ACAAATATGTATGATGTGACAGTACAT 57.163 29.630 18.45 18.45 39.96 2.29
529 530 9.665719 AACAAATATGTATGATGTGACAGTACA 57.334 29.630 9.59 9.59 39.40 2.90
534 535 9.625747 ACCATAACAAATATGTATGATGTGACA 57.374 29.630 0.00 0.00 39.40 3.58
578 579 9.856162 ACTTCCTAAAGTTTGACCAAGTTTATA 57.144 29.630 0.00 0.00 43.28 0.98
579 580 8.762481 ACTTCCTAAAGTTTGACCAAGTTTAT 57.238 30.769 0.00 0.00 43.28 1.40
607 608 4.873827 TGCATATTAGGTTTGACCGAAGTC 59.126 41.667 0.00 0.00 44.90 3.01
608 609 4.839121 TGCATATTAGGTTTGACCGAAGT 58.161 39.130 0.00 0.00 44.90 3.01
609 610 5.116180 TCTGCATATTAGGTTTGACCGAAG 58.884 41.667 0.00 0.00 44.90 3.79
610 611 5.092554 TCTGCATATTAGGTTTGACCGAA 57.907 39.130 0.00 0.00 44.90 4.30
611 612 4.161565 ACTCTGCATATTAGGTTTGACCGA 59.838 41.667 0.00 0.00 44.90 4.69
612 613 4.442706 ACTCTGCATATTAGGTTTGACCG 58.557 43.478 0.00 0.00 44.90 4.79
613 614 7.859325 TTAACTCTGCATATTAGGTTTGACC 57.141 36.000 0.00 0.00 38.99 4.02
620 621 9.878599 CCGTTTTTATTAACTCTGCATATTAGG 57.121 33.333 0.00 0.00 0.00 2.69
623 624 8.621286 CCTCCGTTTTTATTAACTCTGCATATT 58.379 33.333 0.00 0.00 0.00 1.28
624 625 7.228706 CCCTCCGTTTTTATTAACTCTGCATAT 59.771 37.037 0.00 0.00 0.00 1.78
625 626 6.540914 CCCTCCGTTTTTATTAACTCTGCATA 59.459 38.462 0.00 0.00 0.00 3.14
626 627 5.357032 CCCTCCGTTTTTATTAACTCTGCAT 59.643 40.000 0.00 0.00 0.00 3.96
627 628 4.698304 CCCTCCGTTTTTATTAACTCTGCA 59.302 41.667 0.00 0.00 0.00 4.41
628 629 4.939439 TCCCTCCGTTTTTATTAACTCTGC 59.061 41.667 0.00 0.00 0.00 4.26
629 630 6.171213 ACTCCCTCCGTTTTTATTAACTCTG 58.829 40.000 0.00 0.00 0.00 3.35
630 631 6.370186 ACTCCCTCCGTTTTTATTAACTCT 57.630 37.500 0.00 0.00 0.00 3.24
631 632 7.326454 AGTACTCCCTCCGTTTTTATTAACTC 58.674 38.462 0.00 0.00 0.00 3.01
632 633 7.250032 AGTACTCCCTCCGTTTTTATTAACT 57.750 36.000 0.00 0.00 0.00 2.24
633 634 8.253810 ACTAGTACTCCCTCCGTTTTTATTAAC 58.746 37.037 0.00 0.00 0.00 2.01
634 635 8.366359 ACTAGTACTCCCTCCGTTTTTATTAA 57.634 34.615 0.00 0.00 0.00 1.40
635 636 7.961326 ACTAGTACTCCCTCCGTTTTTATTA 57.039 36.000 0.00 0.00 0.00 0.98
636 637 6.864151 ACTAGTACTCCCTCCGTTTTTATT 57.136 37.500 0.00 0.00 0.00 1.40
637 638 7.122048 ACTACTAGTACTCCCTCCGTTTTTAT 58.878 38.462 0.00 0.00 0.00 1.40
638 639 6.485171 ACTACTAGTACTCCCTCCGTTTTTA 58.515 40.000 0.00 0.00 0.00 1.52
639 640 5.328565 ACTACTAGTACTCCCTCCGTTTTT 58.671 41.667 0.00 0.00 0.00 1.94
640 641 4.928263 ACTACTAGTACTCCCTCCGTTTT 58.072 43.478 0.00 0.00 0.00 2.43
641 642 4.582973 ACTACTAGTACTCCCTCCGTTT 57.417 45.455 0.00 0.00 0.00 3.60
642 643 4.582973 AACTACTAGTACTCCCTCCGTT 57.417 45.455 0.00 0.00 0.00 4.44
643 644 4.719273 AGTAACTACTAGTACTCCCTCCGT 59.281 45.833 0.00 0.00 34.13 4.69
644 645 5.289083 AGTAACTACTAGTACTCCCTCCG 57.711 47.826 0.00 0.00 34.13 4.63
658 659 8.751335 CAACTAGCGAGTAGTACTAGTAACTAC 58.249 40.741 22.22 22.22 44.43 2.73
659 660 7.436673 GCAACTAGCGAGTAGTACTAGTAACTA 59.563 40.741 10.28 12.75 44.43 2.24
660 661 6.257630 GCAACTAGCGAGTAGTACTAGTAACT 59.742 42.308 10.28 12.34 44.43 2.24
661 662 6.418141 GCAACTAGCGAGTAGTACTAGTAAC 58.582 44.000 10.28 5.89 44.43 2.50
662 663 6.595772 GCAACTAGCGAGTAGTACTAGTAA 57.404 41.667 10.28 0.79 44.43 2.24
677 678 2.285488 GTGATTCGGCTAAGCAACTAGC 59.715 50.000 0.00 4.39 43.06 3.42
678 679 2.866762 GGTGATTCGGCTAAGCAACTAG 59.133 50.000 0.00 0.00 38.20 2.57
679 680 2.901249 GGTGATTCGGCTAAGCAACTA 58.099 47.619 0.00 0.00 38.20 2.24
680 681 1.279271 AGGTGATTCGGCTAAGCAACT 59.721 47.619 1.29 1.29 46.59 3.16
681 682 1.739067 AGGTGATTCGGCTAAGCAAC 58.261 50.000 0.00 0.00 41.66 4.17
682 683 2.741878 GCTAGGTGATTCGGCTAAGCAA 60.742 50.000 0.00 0.00 34.72 3.91
683 684 1.202533 GCTAGGTGATTCGGCTAAGCA 60.203 52.381 0.00 0.00 0.00 3.91
684 685 1.202533 TGCTAGGTGATTCGGCTAAGC 60.203 52.381 0.00 0.00 0.00 3.09
685 686 2.474816 GTGCTAGGTGATTCGGCTAAG 58.525 52.381 0.00 0.00 0.00 2.18
686 687 1.202371 CGTGCTAGGTGATTCGGCTAA 60.202 52.381 0.00 0.00 0.00 3.09
687 688 0.384309 CGTGCTAGGTGATTCGGCTA 59.616 55.000 0.00 0.00 0.00 3.93
688 689 1.141881 CGTGCTAGGTGATTCGGCT 59.858 57.895 0.00 0.00 0.00 5.52
689 690 1.883084 CCGTGCTAGGTGATTCGGC 60.883 63.158 0.00 0.00 0.00 5.54
690 691 0.249073 CTCCGTGCTAGGTGATTCGG 60.249 60.000 0.00 0.00 39.40 4.30
691 692 0.456221 ACTCCGTGCTAGGTGATTCG 59.544 55.000 7.01 0.00 0.00 3.34
692 693 2.674796 AACTCCGTGCTAGGTGATTC 57.325 50.000 7.01 0.00 0.00 2.52
693 694 4.755266 ATTAACTCCGTGCTAGGTGATT 57.245 40.909 7.01 2.11 0.00 2.57
694 695 4.442706 CAATTAACTCCGTGCTAGGTGAT 58.557 43.478 7.01 0.00 0.00 3.06
695 696 3.857052 CAATTAACTCCGTGCTAGGTGA 58.143 45.455 7.01 0.00 0.00 4.02
696 697 2.351726 GCAATTAACTCCGTGCTAGGTG 59.648 50.000 0.00 0.00 34.13 4.00
697 698 2.027561 TGCAATTAACTCCGTGCTAGGT 60.028 45.455 0.00 0.00 37.87 3.08
698 699 2.627945 TGCAATTAACTCCGTGCTAGG 58.372 47.619 0.00 0.00 37.87 3.02
699 700 5.289595 TCTATGCAATTAACTCCGTGCTAG 58.710 41.667 0.00 0.00 37.87 3.42
700 701 5.270893 TCTATGCAATTAACTCCGTGCTA 57.729 39.130 0.00 0.00 37.87 3.49
701 702 4.137116 TCTATGCAATTAACTCCGTGCT 57.863 40.909 0.00 0.00 37.87 4.40
702 703 4.332819 ACTTCTATGCAATTAACTCCGTGC 59.667 41.667 0.00 0.00 37.51 5.34
719 720 6.310467 GTGATGCTCGAATTGTTGTACTTCTA 59.690 38.462 0.00 0.00 0.00 2.10
757 758 2.598192 CGCAAAAATTAGCAATCGTGGG 59.402 45.455 0.00 0.00 0.00 4.61
826 828 4.247258 TGGGCGCCAATACGTATAAATAG 58.753 43.478 30.85 1.46 34.88 1.73
848 850 2.496817 GGCTCGAGCTGTCGGATT 59.503 61.111 34.46 0.00 46.80 3.01
925 947 1.803943 CTCGTCCTAGTCAGCGCTT 59.196 57.895 7.50 0.00 0.00 4.68
926 948 2.766400 GCTCGTCCTAGTCAGCGCT 61.766 63.158 2.64 2.64 0.00 5.92
960 1003 1.069090 GAACTGGTGCGACAGACCA 59.931 57.895 13.62 3.66 41.37 4.02
962 1005 0.946221 CTGGAACTGGTGCGACAGAC 60.946 60.000 13.62 7.41 40.97 3.51
963 1006 1.367471 CTGGAACTGGTGCGACAGA 59.633 57.895 13.62 0.00 40.97 3.41
965 1008 2.280797 GCTGGAACTGGTGCGACA 60.281 61.111 0.00 0.00 0.00 4.35
1013 1060 2.881352 CGGAGGAAACGAGCGAGC 60.881 66.667 0.00 0.00 0.00 5.03
1014 1061 1.080705 AACGGAGGAAACGAGCGAG 60.081 57.895 0.00 0.00 34.93 5.03
1147 1208 1.271001 TGACCTCGTTGAGACCGTCTA 60.271 52.381 0.00 0.00 0.00 2.59
1226 1296 3.120580 GCAAAAAGACAATGGCCAAATCG 60.121 43.478 10.96 0.15 0.00 3.34
1245 1315 1.669115 GACCTGCAGAAGCTCGCAA 60.669 57.895 17.39 0.00 42.74 4.85
1376 1487 3.181434 ACATGCTAAAAACCTCCTGTCCA 60.181 43.478 0.00 0.00 0.00 4.02
1377 1488 3.191371 CACATGCTAAAAACCTCCTGTCC 59.809 47.826 0.00 0.00 0.00 4.02
1379 1490 2.558359 GCACATGCTAAAAACCTCCTGT 59.442 45.455 0.00 0.00 38.21 4.00
1669 1788 0.610687 GGAGCAGCCACTTGAGTAGT 59.389 55.000 0.00 0.00 37.68 2.73
1692 1811 4.870426 AGCATCAGACCACTACATTTAACG 59.130 41.667 0.00 0.00 0.00 3.18
1723 1842 3.871485 TGCAGTTGCCAAAAAGAATGTT 58.129 36.364 1.06 0.00 41.18 2.71
1783 1911 6.422776 AAACAACAACAACAACAACAACAA 57.577 29.167 0.00 0.00 0.00 2.83
1784 1912 6.422776 AAAACAACAACAACAACAACAACA 57.577 29.167 0.00 0.00 0.00 3.33
1785 1913 6.290799 GCAAAAACAACAACAACAACAACAAC 60.291 34.615 0.00 0.00 0.00 3.32
1786 1914 5.739161 GCAAAAACAACAACAACAACAACAA 59.261 32.000 0.00 0.00 0.00 2.83
1787 1915 5.163764 TGCAAAAACAACAACAACAACAACA 60.164 32.000 0.00 0.00 0.00 3.33
1788 1916 5.266242 TGCAAAAACAACAACAACAACAAC 58.734 33.333 0.00 0.00 0.00 3.32
1789 1917 5.484173 TGCAAAAACAACAACAACAACAA 57.516 30.435 0.00 0.00 0.00 2.83
1790 1918 4.024556 CCTGCAAAAACAACAACAACAACA 60.025 37.500 0.00 0.00 0.00 3.33
1791 1919 4.212214 TCCTGCAAAAACAACAACAACAAC 59.788 37.500 0.00 0.00 0.00 3.32
1792 1920 4.380531 TCCTGCAAAAACAACAACAACAA 58.619 34.783 0.00 0.00 0.00 2.83
1793 1921 3.995199 TCCTGCAAAAACAACAACAACA 58.005 36.364 0.00 0.00 0.00 3.33
1794 1922 4.142924 CCTTCCTGCAAAAACAACAACAAC 60.143 41.667 0.00 0.00 0.00 3.32
1952 2080 5.462240 TCTCTTCTGTCAGATGGTGGATAT 58.538 41.667 14.07 0.00 0.00 1.63
2294 2422 1.288350 CTCTGCATTCTTCAGCTCCG 58.712 55.000 0.00 0.00 0.00 4.63
2331 2459 2.260822 AGCTTCTCTTGGGTGAGCTTA 58.739 47.619 0.00 0.00 34.29 3.09
2397 2525 5.426689 ACTGCCACTTCTCTTCAATATGA 57.573 39.130 0.00 0.00 0.00 2.15
2760 2909 8.945195 AATGTACCATCATCAACATATCCATT 57.055 30.769 0.00 0.00 32.44 3.16
2794 2943 1.696063 ACTGTCTGGTTTGCTGCAAT 58.304 45.000 16.77 0.00 0.00 3.56
3149 3303 1.293924 GGGATCTGCGTGATGAAGTG 58.706 55.000 0.00 0.00 35.14 3.16
3184 3338 4.031611 TGATGATCCATTGCCCAAATTCA 58.968 39.130 0.00 0.00 0.00 2.57
3189 3343 1.689813 GCATGATGATCCATTGCCCAA 59.310 47.619 0.00 0.00 0.00 4.12
3325 3480 1.283029 AGCTGTGTGGATGCTATGGTT 59.717 47.619 0.00 0.00 35.05 3.67
3340 3495 4.202588 CCTGGTAGGAGGTACTATAGCTGT 60.203 50.000 0.00 0.00 41.55 4.40
3377 3532 0.681733 GCGCCAAGATGGATCTCCTA 59.318 55.000 0.00 0.00 40.96 2.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.