Multiple sequence alignment - TraesCS6B01G230300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G230300 chr6B 100.000 3604 0 0 1 3604 371609378 371612981 0.000000e+00 6656.0
1 TraesCS6B01G230300 chr6B 91.832 808 52 8 1 796 118974747 118975552 0.000000e+00 1114.0
2 TraesCS6B01G230300 chr6B 81.549 439 76 5 2173 2607 347119912 347119475 1.230000e-94 357.0
3 TraesCS6B01G230300 chr6B 92.121 165 12 1 2860 3023 371612157 371612321 7.780000e-57 231.0
4 TraesCS6B01G230300 chr6B 92.121 165 12 1 2780 2944 371612237 371612400 7.780000e-57 231.0
5 TraesCS6B01G230300 chr6B 91.860 86 6 1 2939 3023 371612157 371612242 6.320000e-23 119.0
6 TraesCS6B01G230300 chr6B 91.860 86 6 1 2780 2865 371612316 371612400 6.320000e-23 119.0
7 TraesCS6B01G230300 chr6D 94.995 2058 82 9 813 2865 198603505 198601464 0.000000e+00 3210.0
8 TraesCS6B01G230300 chr6D 85.016 307 22 7 2942 3232 198601545 198601247 1.270000e-74 291.0
9 TraesCS6B01G230300 chr6D 96.154 52 2 0 3464 3515 238520939 238520888 6.410000e-13 86.1
10 TraesCS6B01G230300 chr6D 96.078 51 2 0 3465 3515 238513957 238513907 2.310000e-12 84.2
11 TraesCS6B01G230300 chr6D 94.444 36 2 0 3282 3317 198601211 198601176 5.030000e-04 56.5
12 TraesCS6B01G230300 chr6D 100.000 29 0 0 3226 3254 198601238 198601210 2.000000e-03 54.7
13 TraesCS6B01G230300 chr6A 94.163 2056 92 12 813 2865 299717163 299719193 0.000000e+00 3107.0
14 TraesCS6B01G230300 chr6A 83.038 395 36 16 2939 3311 299719109 299719494 2.680000e-86 329.0
15 TraesCS6B01G230300 chr3B 94.052 807 32 9 1 796 740886332 740887133 0.000000e+00 1210.0
16 TraesCS6B01G230300 chr3B 90.683 805 55 12 1 793 16676230 16675434 0.000000e+00 1053.0
17 TraesCS6B01G230300 chr3B 90.311 805 59 8 1 789 602480362 602479561 0.000000e+00 1037.0
18 TraesCS6B01G230300 chr3B 86.256 211 24 5 561 771 800145083 800144878 1.300000e-54 224.0
19 TraesCS6B01G230300 chr3B 91.358 81 5 2 3521 3600 611356497 611356576 3.800000e-20 110.0
20 TraesCS6B01G230300 chr3B 94.231 52 3 0 3464 3515 611352326 611352377 2.980000e-11 80.5
21 TraesCS6B01G230300 chr1B 92.583 809 33 10 1 797 628102791 628101998 0.000000e+00 1136.0
22 TraesCS6B01G230300 chr3D 92.579 795 42 7 1 783 602075107 602074318 0.000000e+00 1125.0
23 TraesCS6B01G230300 chr3D 88.889 72 5 3 3465 3536 56611932 56612000 6.410000e-13 86.1
24 TraesCS6B01G230300 chr7D 91.634 777 49 10 1 764 102536497 102537270 0.000000e+00 1061.0
25 TraesCS6B01G230300 chr5A 90.208 817 57 11 1 797 293500776 293501589 0.000000e+00 1044.0
26 TraesCS6B01G230300 chr5A 94.118 51 3 0 3465 3515 616018379 616018329 1.070000e-10 78.7
27 TraesCS6B01G230300 chr4D 91.511 695 48 5 110 796 306298460 306297769 0.000000e+00 946.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G230300 chr6B 371609378 371612981 3603 False 1471.20 6656 93.59240 1 3604 5 chr6B.!!$F2 3603
1 TraesCS6B01G230300 chr6B 118974747 118975552 805 False 1114.00 1114 91.83200 1 796 1 chr6B.!!$F1 795
2 TraesCS6B01G230300 chr6D 198601176 198603505 2329 True 903.05 3210 93.61375 813 3317 4 chr6D.!!$R3 2504
3 TraesCS6B01G230300 chr6A 299717163 299719494 2331 False 1718.00 3107 88.60050 813 3311 2 chr6A.!!$F1 2498
4 TraesCS6B01G230300 chr3B 740886332 740887133 801 False 1210.00 1210 94.05200 1 796 1 chr3B.!!$F3 795
5 TraesCS6B01G230300 chr3B 16675434 16676230 796 True 1053.00 1053 90.68300 1 793 1 chr3B.!!$R1 792
6 TraesCS6B01G230300 chr3B 602479561 602480362 801 True 1037.00 1037 90.31100 1 789 1 chr3B.!!$R2 788
7 TraesCS6B01G230300 chr1B 628101998 628102791 793 True 1136.00 1136 92.58300 1 797 1 chr1B.!!$R1 796
8 TraesCS6B01G230300 chr3D 602074318 602075107 789 True 1125.00 1125 92.57900 1 783 1 chr3D.!!$R1 782
9 TraesCS6B01G230300 chr7D 102536497 102537270 773 False 1061.00 1061 91.63400 1 764 1 chr7D.!!$F1 763
10 TraesCS6B01G230300 chr5A 293500776 293501589 813 False 1044.00 1044 90.20800 1 797 1 chr5A.!!$F1 796
11 TraesCS6B01G230300 chr4D 306297769 306298460 691 True 946.00 946 91.51100 110 796 1 chr4D.!!$R1 686

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
797 834 0.522180 CGTCAACTAGGAGCACTCGT 59.478 55.0 0.00 0.00 0.00 4.18 F
1418 1455 0.793104 GTACATTGGAAAGCGCGTGC 60.793 55.0 14.39 14.39 43.24 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2576 2621 0.249955 TCATCTCATGCGGCTTGTCA 59.750 50.0 14.53 4.33 0.0 3.58 R
3411 3499 0.032403 TTGTGCTGCTTGATTGCCAC 59.968 50.0 0.00 0.00 0.0 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
412 441 7.484140 TGTGCATCACAAAAATTTACACTGTA 58.516 30.769 0.00 0.00 41.69 2.74
530 563 7.464830 TCGAGGAAACGATATTCATTTCTTC 57.535 36.000 0.00 8.28 37.37 2.87
577 610 5.449107 ACCGCTGTACATAATACCTACTG 57.551 43.478 0.00 0.00 0.00 2.74
598 631 3.918114 GAGCGCTGCAGTCAAACGC 62.918 63.158 18.48 22.79 43.81 4.84
646 680 2.126914 AAGTCTGCTGCGTATCGATC 57.873 50.000 0.00 0.00 0.00 3.69
676 710 2.954611 GAAACCAGGAACGCTGCC 59.045 61.111 0.00 0.00 0.00 4.85
746 783 1.209127 CGTTTGGCGCGAATCCTTT 59.791 52.632 12.10 0.00 0.00 3.11
797 834 0.522180 CGTCAACTAGGAGCACTCGT 59.478 55.000 0.00 0.00 0.00 4.18
798 835 1.736126 CGTCAACTAGGAGCACTCGTA 59.264 52.381 0.00 0.62 0.00 3.43
799 836 2.355132 CGTCAACTAGGAGCACTCGTAT 59.645 50.000 0.00 0.00 30.73 3.06
800 837 3.558829 CGTCAACTAGGAGCACTCGTATA 59.441 47.826 0.00 0.00 30.73 1.47
801 838 4.318903 CGTCAACTAGGAGCACTCGTATAG 60.319 50.000 0.00 2.18 30.73 1.31
802 839 4.023878 GTCAACTAGGAGCACTCGTATAGG 60.024 50.000 0.00 0.00 30.73 2.57
803 840 4.135306 CAACTAGGAGCACTCGTATAGGA 58.865 47.826 0.00 0.00 30.73 2.94
804 841 4.010667 ACTAGGAGCACTCGTATAGGAG 57.989 50.000 18.61 18.61 39.97 3.69
805 842 2.279935 AGGAGCACTCGTATAGGAGG 57.720 55.000 22.78 14.19 38.39 4.30
806 843 1.495574 AGGAGCACTCGTATAGGAGGT 59.504 52.381 22.78 9.82 38.39 3.85
807 844 1.881324 GGAGCACTCGTATAGGAGGTC 59.119 57.143 22.78 16.20 38.39 3.85
808 845 1.881324 GAGCACTCGTATAGGAGGTCC 59.119 57.143 22.78 12.23 38.39 4.46
809 846 0.960286 GCACTCGTATAGGAGGTCCC 59.040 60.000 22.78 7.48 38.39 4.46
810 847 1.618487 CACTCGTATAGGAGGTCCCC 58.382 60.000 22.78 0.00 38.39 4.81
811 848 1.145325 CACTCGTATAGGAGGTCCCCT 59.855 57.143 22.78 4.51 38.39 4.79
825 862 1.221840 CCCCTCGCATAACAGCACT 59.778 57.895 0.00 0.00 0.00 4.40
836 873 4.539870 CATAACAGCACTCCAACAAGTTG 58.460 43.478 0.00 0.00 40.13 3.16
906 943 3.694072 GCAATTAGCCCACACTACATGAA 59.306 43.478 0.00 0.00 37.23 2.57
907 944 4.157656 GCAATTAGCCCACACTACATGAAA 59.842 41.667 0.00 0.00 37.23 2.69
908 945 5.677091 GCAATTAGCCCACACTACATGAAAG 60.677 44.000 0.00 0.00 37.23 2.62
909 946 4.901197 TTAGCCCACACTACATGAAAGA 57.099 40.909 0.00 0.00 0.00 2.52
910 947 3.340814 AGCCCACACTACATGAAAGAG 57.659 47.619 0.00 0.00 0.00 2.85
911 948 2.026822 AGCCCACACTACATGAAAGAGG 60.027 50.000 0.00 2.40 0.00 3.69
912 949 2.359900 CCCACACTACATGAAAGAGGC 58.640 52.381 0.00 0.00 0.00 4.70
913 950 2.359900 CCACACTACATGAAAGAGGCC 58.640 52.381 0.00 0.00 0.00 5.19
1359 1396 2.093306 TTCGGTTGTTGCAGATCGAT 57.907 45.000 0.00 0.00 0.00 3.59
1405 1442 3.090219 GCTCGCGGGGAGGTACATT 62.090 63.158 21.65 0.00 43.36 2.71
1418 1455 0.793104 GTACATTGGAAAGCGCGTGC 60.793 55.000 14.39 14.39 43.24 5.34
1465 1502 3.431486 GCCTTCTCCTCATCACTGGTAAG 60.431 52.174 0.00 0.00 0.00 2.34
1486 1523 1.350193 CTCGTTGCTTCGTGTGCTAT 58.650 50.000 1.73 0.00 0.00 2.97
1591 1629 4.640789 TGCGAACACATTTTTAGGTTGT 57.359 36.364 0.00 0.00 0.00 3.32
1592 1630 5.752892 TGCGAACACATTTTTAGGTTGTA 57.247 34.783 0.00 0.00 0.00 2.41
1593 1631 6.320494 TGCGAACACATTTTTAGGTTGTAT 57.680 33.333 0.00 0.00 0.00 2.29
1594 1632 7.436430 TGCGAACACATTTTTAGGTTGTATA 57.564 32.000 0.00 0.00 0.00 1.47
1633 1675 6.981722 AGGTTGTTACATTGTTGAATCCTTC 58.018 36.000 0.00 0.00 0.00 3.46
1634 1676 6.777580 AGGTTGTTACATTGTTGAATCCTTCT 59.222 34.615 0.00 0.00 0.00 2.85
1664 1706 4.634012 TCTGGCTTGTTTAGTGGTGTAT 57.366 40.909 0.00 0.00 0.00 2.29
1678 1720 2.827652 GGTGTATCTCTAGCACCTTGC 58.172 52.381 8.71 0.00 46.57 4.01
1722 1764 5.127194 TGAGATTGAATAGTAGCTCAACGGT 59.873 40.000 0.00 0.00 34.52 4.83
1745 1787 9.796120 CGGTTTATTGTGTTAACCATTCATAAT 57.204 29.630 2.48 0.00 41.06 1.28
1807 1849 5.621197 AAGAACATTGCTTGCGTTACATA 57.379 34.783 0.00 0.00 0.00 2.29
1853 1895 4.062293 TGAATTTCGGTACTTGTGGACTG 58.938 43.478 0.00 0.00 0.00 3.51
1855 1897 1.416243 TTCGGTACTTGTGGACTGGT 58.584 50.000 0.00 0.00 0.00 4.00
1857 1899 1.764134 TCGGTACTTGTGGACTGGTTT 59.236 47.619 0.00 0.00 0.00 3.27
1907 1949 2.371841 TCATTGGTATCCCGGGATTCAG 59.628 50.000 40.00 24.31 36.17 3.02
1911 1953 2.047830 GGTATCCCGGGATTCAGAGTT 58.952 52.381 40.00 17.85 36.17 3.01
1975 2018 7.921786 TTGTTATCAGTCCCACTTCTATTTG 57.078 36.000 0.00 0.00 0.00 2.32
2076 2119 5.079643 AGTGGGAGTTGTTTGCTGATAATT 58.920 37.500 0.00 0.00 0.00 1.40
2079 2122 4.176271 GGAGTTGTTTGCTGATAATTGGC 58.824 43.478 0.00 0.00 0.00 4.52
2118 2161 2.732412 TCTGTACTCTCAAGCACTGC 57.268 50.000 0.00 0.00 0.00 4.40
2130 2173 1.832167 GCACTGCACTTTCCCCCAA 60.832 57.895 0.00 0.00 0.00 4.12
2218 2263 1.078918 TGCCAATCCGCAGAGTGAG 60.079 57.895 0.00 0.00 40.57 3.51
2369 2414 2.022195 TCGGAGAAGGAGGTACATTCG 58.978 52.381 0.00 0.00 43.00 3.34
2375 2420 3.055094 AGAAGGAGGTACATTCGTGCATT 60.055 43.478 0.00 0.00 43.00 3.56
2413 2458 2.423577 CCTTTACCCGTCTTGTTCCAG 58.576 52.381 0.00 0.00 0.00 3.86
2419 2464 1.067071 CCCGTCTTGTTCCAGTACCTC 60.067 57.143 0.00 0.00 0.00 3.85
2483 2528 2.420687 GCCCGACTTCAAGAAGGATGAT 60.421 50.000 13.83 0.00 42.53 2.45
2491 2536 4.148128 TCAAGAAGGATGATCAGAAGGC 57.852 45.455 0.09 0.00 0.00 4.35
2510 2555 1.268896 GCCATTGATGCCGAGTTGATG 60.269 52.381 0.00 0.00 0.00 3.07
2688 2733 5.473504 TCTGTACTTCTGATTTCTTTTGCCC 59.526 40.000 0.00 0.00 0.00 5.36
2700 2745 0.676736 TTTTGCCCGGTTGGTGAATC 59.323 50.000 0.00 0.00 36.04 2.52
2745 2790 8.125978 TGCCTGTCAAATATTTTGAGAAGATT 57.874 30.769 0.00 0.00 0.00 2.40
2767 2813 8.294690 AGATTACTAGAAGTACCATCCCCTTTA 58.705 37.037 0.00 0.00 28.93 1.85
2773 2819 2.177016 AGTACCATCCCCTTTATTGGCC 59.823 50.000 0.00 0.00 32.26 5.36
2774 2820 0.264657 ACCATCCCCTTTATTGGCCC 59.735 55.000 0.00 0.00 32.26 5.80
2787 2833 1.739338 TTGGCCCGTTGCGACATTTT 61.739 50.000 0.00 0.00 42.61 1.82
2788 2834 1.443702 GGCCCGTTGCGACATTTTC 60.444 57.895 4.64 0.00 42.61 2.29
2789 2835 1.579429 GCCCGTTGCGACATTTTCT 59.421 52.632 4.64 0.00 0.00 2.52
2790 2836 0.039527 GCCCGTTGCGACATTTTCTT 60.040 50.000 4.64 0.00 0.00 2.52
2791 2837 1.685302 CCCGTTGCGACATTTTCTTG 58.315 50.000 4.64 0.00 0.00 3.02
2792 2838 1.265635 CCCGTTGCGACATTTTCTTGA 59.734 47.619 4.64 0.00 0.00 3.02
2793 2839 2.095263 CCCGTTGCGACATTTTCTTGAT 60.095 45.455 4.64 0.00 0.00 2.57
2794 2840 3.163594 CCGTTGCGACATTTTCTTGATC 58.836 45.455 4.64 0.00 0.00 2.92
2795 2841 3.163594 CGTTGCGACATTTTCTTGATCC 58.836 45.455 4.64 0.00 0.00 3.36
2796 2842 3.163594 GTTGCGACATTTTCTTGATCCG 58.836 45.455 0.00 0.00 0.00 4.18
2797 2843 2.422597 TGCGACATTTTCTTGATCCGT 58.577 42.857 0.00 0.00 0.00 4.69
2798 2844 2.415168 TGCGACATTTTCTTGATCCGTC 59.585 45.455 0.00 0.00 0.00 4.79
2799 2845 2.415168 GCGACATTTTCTTGATCCGTCA 59.585 45.455 0.00 0.00 0.00 4.35
2800 2846 3.063997 GCGACATTTTCTTGATCCGTCAT 59.936 43.478 0.00 0.00 33.56 3.06
2801 2847 4.437390 GCGACATTTTCTTGATCCGTCATT 60.437 41.667 0.00 0.00 33.56 2.57
2802 2848 5.023920 CGACATTTTCTTGATCCGTCATTG 58.976 41.667 0.00 0.00 33.56 2.82
2803 2849 5.390885 CGACATTTTCTTGATCCGTCATTGT 60.391 40.000 0.00 0.00 33.56 2.71
2804 2850 6.183360 CGACATTTTCTTGATCCGTCATTGTA 60.183 38.462 0.00 0.00 33.56 2.41
2805 2851 7.465916 CGACATTTTCTTGATCCGTCATTGTAT 60.466 37.037 0.00 0.00 33.56 2.29
2806 2852 8.055279 ACATTTTCTTGATCCGTCATTGTATT 57.945 30.769 0.00 0.00 33.56 1.89
2807 2853 9.173021 ACATTTTCTTGATCCGTCATTGTATTA 57.827 29.630 0.00 0.00 33.56 0.98
2811 2857 8.956533 TTCTTGATCCGTCATTGTATTATTCA 57.043 30.769 0.00 0.00 33.56 2.57
2812 2858 8.593492 TCTTGATCCGTCATTGTATTATTCAG 57.407 34.615 0.00 0.00 33.56 3.02
2813 2859 7.657354 TCTTGATCCGTCATTGTATTATTCAGG 59.343 37.037 0.00 0.00 33.56 3.86
2814 2860 5.700832 TGATCCGTCATTGTATTATTCAGGC 59.299 40.000 0.00 0.00 0.00 4.85
2815 2861 5.290493 TCCGTCATTGTATTATTCAGGCT 57.710 39.130 0.00 0.00 0.00 4.58
2816 2862 5.056480 TCCGTCATTGTATTATTCAGGCTG 58.944 41.667 8.58 8.58 0.00 4.85
2817 2863 4.319766 CCGTCATTGTATTATTCAGGCTGC 60.320 45.833 10.34 0.00 0.00 5.25
2818 2864 4.273235 CGTCATTGTATTATTCAGGCTGCA 59.727 41.667 10.34 0.00 0.00 4.41
2819 2865 5.220835 CGTCATTGTATTATTCAGGCTGCAA 60.221 40.000 10.34 6.77 0.00 4.08
2820 2866 6.513884 CGTCATTGTATTATTCAGGCTGCAAT 60.514 38.462 10.34 12.64 0.00 3.56
2821 2867 7.205297 GTCATTGTATTATTCAGGCTGCAATT 58.795 34.615 10.34 0.20 0.00 2.32
2822 2868 7.380602 GTCATTGTATTATTCAGGCTGCAATTC 59.619 37.037 10.34 7.62 0.00 2.17
2823 2869 7.286087 TCATTGTATTATTCAGGCTGCAATTCT 59.714 33.333 10.34 4.76 0.00 2.40
2824 2870 6.381481 TGTATTATTCAGGCTGCAATTCTG 57.619 37.500 10.34 0.00 0.00 3.02
2825 2871 6.121590 TGTATTATTCAGGCTGCAATTCTGA 58.878 36.000 10.34 8.62 35.95 3.27
2826 2872 5.769484 ATTATTCAGGCTGCAATTCTGAG 57.231 39.130 10.34 0.00 38.55 3.35
2827 2873 2.574006 TTCAGGCTGCAATTCTGAGT 57.426 45.000 10.34 0.00 38.55 3.41
2828 2874 3.701205 TTCAGGCTGCAATTCTGAGTA 57.299 42.857 10.34 0.00 38.55 2.59
2829 2875 3.701205 TCAGGCTGCAATTCTGAGTAA 57.299 42.857 10.34 0.00 33.21 2.24
2830 2876 4.019792 TCAGGCTGCAATTCTGAGTAAA 57.980 40.909 10.34 0.00 33.21 2.01
2831 2877 4.592942 TCAGGCTGCAATTCTGAGTAAAT 58.407 39.130 10.34 0.00 33.21 1.40
2832 2878 4.397103 TCAGGCTGCAATTCTGAGTAAATG 59.603 41.667 10.34 0.00 33.21 2.32
2833 2879 4.157289 CAGGCTGCAATTCTGAGTAAATGT 59.843 41.667 0.00 0.00 0.00 2.71
2834 2880 4.768968 AGGCTGCAATTCTGAGTAAATGTT 59.231 37.500 0.50 0.00 0.00 2.71
2835 2881 5.244626 AGGCTGCAATTCTGAGTAAATGTTT 59.755 36.000 0.50 0.00 0.00 2.83
2836 2882 5.928264 GGCTGCAATTCTGAGTAAATGTTTT 59.072 36.000 0.50 0.00 0.00 2.43
2837 2883 7.039784 AGGCTGCAATTCTGAGTAAATGTTTTA 60.040 33.333 0.50 0.00 0.00 1.52
2838 2884 7.761249 GGCTGCAATTCTGAGTAAATGTTTTAT 59.239 33.333 0.50 0.00 0.00 1.40
2839 2885 8.801913 GCTGCAATTCTGAGTAAATGTTTTATC 58.198 33.333 0.00 0.00 0.00 1.75
2854 2900 8.922058 AATGTTTTATCTTCTGATCATTGTGC 57.078 30.769 0.00 0.00 34.32 4.57
2855 2901 7.451501 TGTTTTATCTTCTGATCATTGTGCA 57.548 32.000 0.00 0.00 34.32 4.57
2856 2902 8.058667 TGTTTTATCTTCTGATCATTGTGCAT 57.941 30.769 0.00 0.00 34.32 3.96
2857 2903 7.971722 TGTTTTATCTTCTGATCATTGTGCATG 59.028 33.333 0.00 0.00 34.32 4.06
2858 2904 7.868906 TTTATCTTCTGATCATTGTGCATGA 57.131 32.000 0.00 0.00 46.41 3.07
2859 2905 5.752892 ATCTTCTGATCATTGTGCATGAC 57.247 39.130 0.00 0.00 45.12 3.06
2860 2906 3.619929 TCTTCTGATCATTGTGCATGACG 59.380 43.478 0.00 0.00 45.12 4.35
2861 2907 1.667212 TCTGATCATTGTGCATGACGC 59.333 47.619 0.00 0.00 45.12 5.19
2862 2908 0.734309 TGATCATTGTGCATGACGCC 59.266 50.000 0.00 0.00 45.12 5.68
2863 2909 0.734309 GATCATTGTGCATGACGCCA 59.266 50.000 0.00 0.00 45.12 5.69
2864 2910 1.335810 GATCATTGTGCATGACGCCAT 59.664 47.619 0.00 0.00 45.12 4.40
2865 2911 1.175654 TCATTGTGCATGACGCCATT 58.824 45.000 0.00 0.00 36.94 3.16
2866 2912 1.545136 TCATTGTGCATGACGCCATTT 59.455 42.857 0.00 0.00 36.94 2.32
2882 2928 3.000041 CCATTTTCTTGATCCGTCGTCA 59.000 45.455 0.00 0.00 0.00 4.35
2907 2953 2.760634 TTCAGGCTGCAATTCGAGTA 57.239 45.000 10.34 0.00 0.00 2.59
2908 2954 2.760634 TCAGGCTGCAATTCGAGTAA 57.239 45.000 10.34 0.00 0.00 2.24
2909 2955 3.052455 TCAGGCTGCAATTCGAGTAAA 57.948 42.857 10.34 0.00 0.00 2.01
2910 2956 3.609853 TCAGGCTGCAATTCGAGTAAAT 58.390 40.909 10.34 0.00 0.00 1.40
2911 2957 3.374988 TCAGGCTGCAATTCGAGTAAATG 59.625 43.478 10.34 0.00 0.00 2.32
2912 2958 3.127548 CAGGCTGCAATTCGAGTAAATGT 59.872 43.478 0.00 0.00 0.00 2.71
2913 2959 3.758554 AGGCTGCAATTCGAGTAAATGTT 59.241 39.130 0.50 0.00 0.00 2.71
2914 2960 4.218417 AGGCTGCAATTCGAGTAAATGTTT 59.782 37.500 0.50 0.00 0.00 2.83
2915 2961 4.923281 GGCTGCAATTCGAGTAAATGTTTT 59.077 37.500 0.50 0.00 0.00 2.43
2916 2962 6.072175 AGGCTGCAATTCGAGTAAATGTTTTA 60.072 34.615 0.50 0.00 0.00 1.52
2917 2963 6.751888 GGCTGCAATTCGAGTAAATGTTTTAT 59.248 34.615 0.50 0.00 0.00 1.40
2918 2964 7.044052 GGCTGCAATTCGAGTAAATGTTTTATC 60.044 37.037 0.50 0.00 0.00 1.75
2919 2965 7.698130 GCTGCAATTCGAGTAAATGTTTTATCT 59.302 33.333 0.00 0.00 0.00 1.98
2920 2966 9.559958 CTGCAATTCGAGTAAATGTTTTATCTT 57.440 29.630 0.00 0.00 0.00 2.40
2921 2967 9.554724 TGCAATTCGAGTAAATGTTTTATCTTC 57.445 29.630 0.00 0.00 0.00 2.87
2922 2968 9.774742 GCAATTCGAGTAAATGTTTTATCTTCT 57.225 29.630 0.00 0.00 0.00 2.85
2940 2986 6.048073 TCTTCTTATTATTGTGCATGACGC 57.952 37.500 0.00 0.00 42.89 5.19
2941 2987 4.811555 TCTTATTATTGTGCATGACGCC 57.188 40.909 0.00 0.00 41.33 5.68
2942 2988 4.195416 TCTTATTATTGTGCATGACGCCA 58.805 39.130 0.00 0.00 41.33 5.69
2943 2989 4.821260 TCTTATTATTGTGCATGACGCCAT 59.179 37.500 0.00 0.00 41.33 4.40
2944 2990 5.299028 TCTTATTATTGTGCATGACGCCATT 59.701 36.000 0.00 0.00 41.33 3.16
2945 2991 3.865011 TTATTGTGCATGACGCCATTT 57.135 38.095 0.00 0.00 41.33 2.32
2946 2992 2.747396 ATTGTGCATGACGCCATTTT 57.253 40.000 0.00 0.00 41.33 1.82
2947 2993 2.063156 TTGTGCATGACGCCATTTTC 57.937 45.000 0.00 0.00 41.33 2.29
2948 2994 1.246649 TGTGCATGACGCCATTTTCT 58.753 45.000 0.00 0.00 41.33 2.52
2949 2995 1.612950 TGTGCATGACGCCATTTTCTT 59.387 42.857 0.00 0.00 41.33 2.52
2950 2996 1.987770 GTGCATGACGCCATTTTCTTG 59.012 47.619 0.00 0.00 41.33 3.02
2951 2997 1.885233 TGCATGACGCCATTTTCTTGA 59.115 42.857 0.00 0.00 41.33 3.02
2952 2998 2.492881 TGCATGACGCCATTTTCTTGAT 59.507 40.909 0.00 0.00 41.33 2.57
2953 2999 3.111098 GCATGACGCCATTTTCTTGATC 58.889 45.455 0.00 0.00 32.94 2.92
2954 3000 3.699067 CATGACGCCATTTTCTTGATCC 58.301 45.455 0.00 0.00 0.00 3.36
2955 3001 1.737236 TGACGCCATTTTCTTGATCCG 59.263 47.619 0.00 0.00 0.00 4.18
2956 3002 1.737793 GACGCCATTTTCTTGATCCGT 59.262 47.619 0.00 0.00 0.00 4.69
2957 3003 1.737793 ACGCCATTTTCTTGATCCGTC 59.262 47.619 0.00 0.00 0.00 4.79
2958 3004 1.267532 CGCCATTTTCTTGATCCGTCG 60.268 52.381 0.00 0.00 0.00 5.12
2959 3005 1.737793 GCCATTTTCTTGATCCGTCGT 59.262 47.619 0.00 0.00 0.00 4.34
2960 3006 2.223044 GCCATTTTCTTGATCCGTCGTC 60.223 50.000 0.00 0.00 0.00 4.20
2961 3007 2.029244 CCATTTTCTTGATCCGTCGTCG 59.971 50.000 0.00 0.00 0.00 5.12
2962 3008 2.427232 TTTTCTTGATCCGTCGTCGT 57.573 45.000 0.71 0.00 35.01 4.34
2963 3009 3.557577 TTTTCTTGATCCGTCGTCGTA 57.442 42.857 0.71 0.00 35.01 3.43
2964 3010 3.770263 TTTCTTGATCCGTCGTCGTAT 57.230 42.857 0.71 0.00 35.01 3.06
2965 3011 3.770263 TTCTTGATCCGTCGTCGTATT 57.230 42.857 0.71 0.00 35.01 1.89
2966 3012 3.329743 TCTTGATCCGTCGTCGTATTC 57.670 47.619 0.71 0.00 35.01 1.75
2967 3013 2.941064 TCTTGATCCGTCGTCGTATTCT 59.059 45.455 0.71 0.00 35.01 2.40
2968 3014 3.376234 TCTTGATCCGTCGTCGTATTCTT 59.624 43.478 0.71 0.00 35.01 2.52
2969 3015 3.329743 TGATCCGTCGTCGTATTCTTC 57.670 47.619 0.71 0.00 35.01 2.87
2970 3016 2.679336 TGATCCGTCGTCGTATTCTTCA 59.321 45.455 0.71 0.00 35.01 3.02
2971 3017 2.819422 TCCGTCGTCGTATTCTTCAG 57.181 50.000 0.71 0.00 35.01 3.02
2972 3018 1.399440 TCCGTCGTCGTATTCTTCAGG 59.601 52.381 0.71 0.00 35.01 3.86
2973 3019 1.189403 CGTCGTCGTATTCTTCAGGC 58.811 55.000 0.00 0.00 0.00 4.85
2974 3020 1.202154 CGTCGTCGTATTCTTCAGGCT 60.202 52.381 0.00 0.00 0.00 4.58
2975 3021 2.186076 GTCGTCGTATTCTTCAGGCTG 58.814 52.381 8.58 8.58 0.00 4.85
2976 3022 0.924090 CGTCGTATTCTTCAGGCTGC 59.076 55.000 10.34 0.00 0.00 5.25
2977 3023 1.469940 CGTCGTATTCTTCAGGCTGCT 60.470 52.381 10.34 0.00 0.00 4.24
2978 3024 2.223502 CGTCGTATTCTTCAGGCTGCTA 60.224 50.000 10.34 0.00 0.00 3.49
2979 3025 3.551046 CGTCGTATTCTTCAGGCTGCTAT 60.551 47.826 10.34 2.91 0.00 2.97
2980 3026 3.984633 GTCGTATTCTTCAGGCTGCTATC 59.015 47.826 10.34 0.00 0.00 2.08
2981 3027 3.005897 TCGTATTCTTCAGGCTGCTATCC 59.994 47.826 10.34 0.00 0.00 2.59
2982 3028 2.540265 ATTCTTCAGGCTGCTATCCG 57.460 50.000 10.34 0.00 0.00 4.18
2983 3029 1.485124 TTCTTCAGGCTGCTATCCGA 58.515 50.000 10.34 0.00 0.00 4.55
2984 3030 1.035923 TCTTCAGGCTGCTATCCGAG 58.964 55.000 10.34 0.00 0.00 4.63
2985 3031 0.749649 CTTCAGGCTGCTATCCGAGT 59.250 55.000 10.34 0.00 0.00 4.18
2986 3032 1.957177 CTTCAGGCTGCTATCCGAGTA 59.043 52.381 10.34 0.00 0.00 2.59
3089 3151 2.928801 TTTGCAGAGCTTGGACAGTA 57.071 45.000 0.00 0.00 0.00 2.74
3092 3154 4.551702 TTGCAGAGCTTGGACAGTATTA 57.448 40.909 0.00 0.00 0.00 0.98
3103 3165 7.985184 AGCTTGGACAGTATTATGATTTCGTTA 59.015 33.333 0.00 0.00 0.00 3.18
3104 3166 8.774586 GCTTGGACAGTATTATGATTTCGTTAT 58.225 33.333 0.00 0.00 0.00 1.89
3145 3207 4.108501 ACAATCCGTTCCCCTAAAAGTT 57.891 40.909 0.00 0.00 0.00 2.66
3257 3345 1.996292 GAGTGCGTACAATCTGCTCA 58.004 50.000 6.38 0.00 37.89 4.26
3258 3346 2.337583 GAGTGCGTACAATCTGCTCAA 58.662 47.619 6.38 0.00 37.89 3.02
3259 3347 2.069273 AGTGCGTACAATCTGCTCAAC 58.931 47.619 6.38 0.00 0.00 3.18
3260 3348 2.069273 GTGCGTACAATCTGCTCAACT 58.931 47.619 0.00 0.00 0.00 3.16
3261 3349 2.480419 GTGCGTACAATCTGCTCAACTT 59.520 45.455 0.00 0.00 0.00 2.66
3262 3350 3.678072 GTGCGTACAATCTGCTCAACTTA 59.322 43.478 0.00 0.00 0.00 2.24
3263 3351 4.330074 GTGCGTACAATCTGCTCAACTTAT 59.670 41.667 0.00 0.00 0.00 1.73
3264 3352 4.566759 TGCGTACAATCTGCTCAACTTATC 59.433 41.667 0.00 0.00 0.00 1.75
3265 3353 4.566759 GCGTACAATCTGCTCAACTTATCA 59.433 41.667 0.00 0.00 0.00 2.15
3266 3354 5.276584 GCGTACAATCTGCTCAACTTATCAG 60.277 44.000 0.00 0.00 0.00 2.90
3267 3355 5.276584 CGTACAATCTGCTCAACTTATCAGC 60.277 44.000 0.00 0.00 0.00 4.26
3268 3356 4.582869 ACAATCTGCTCAACTTATCAGCA 58.417 39.130 0.00 0.00 40.90 4.41
3269 3357 5.005740 ACAATCTGCTCAACTTATCAGCAA 58.994 37.500 0.00 0.00 42.52 3.91
3270 3358 5.474532 ACAATCTGCTCAACTTATCAGCAAA 59.525 36.000 0.00 0.00 42.52 3.68
3271 3359 6.016024 ACAATCTGCTCAACTTATCAGCAAAA 60.016 34.615 0.00 0.00 42.52 2.44
3272 3360 6.770746 ATCTGCTCAACTTATCAGCAAAAT 57.229 33.333 0.00 0.00 42.52 1.82
3273 3361 5.946298 TCTGCTCAACTTATCAGCAAAATG 58.054 37.500 0.00 0.00 42.52 2.32
3274 3362 5.474532 TCTGCTCAACTTATCAGCAAAATGT 59.525 36.000 0.00 0.00 42.52 2.71
3275 3363 5.702865 TGCTCAACTTATCAGCAAAATGTC 58.297 37.500 0.00 0.00 40.22 3.06
3276 3364 5.098211 GCTCAACTTATCAGCAAAATGTCC 58.902 41.667 0.00 0.00 33.06 4.02
3277 3365 5.335897 GCTCAACTTATCAGCAAAATGTCCA 60.336 40.000 0.00 0.00 33.06 4.02
3278 3366 6.647334 TCAACTTATCAGCAAAATGTCCAA 57.353 33.333 0.00 0.00 0.00 3.53
3279 3367 6.680810 TCAACTTATCAGCAAAATGTCCAAG 58.319 36.000 0.00 0.00 0.00 3.61
3280 3368 6.489700 TCAACTTATCAGCAAAATGTCCAAGA 59.510 34.615 0.00 0.00 0.00 3.02
3281 3369 7.177216 TCAACTTATCAGCAAAATGTCCAAGAT 59.823 33.333 0.00 0.00 0.00 2.40
3282 3370 6.860080 ACTTATCAGCAAAATGTCCAAGATG 58.140 36.000 0.00 0.00 0.00 2.90
3311 3399 8.328758 ACTCCCTCTGATGTGAAATATGTTTTA 58.671 33.333 0.00 0.00 0.00 1.52
3313 3401 9.699410 TCCCTCTGATGTGAAATATGTTTTATT 57.301 29.630 0.00 0.00 0.00 1.40
3338 3426 8.654230 TGTTGTTCAATCTTAGAGATCATAGC 57.346 34.615 0.00 0.00 32.89 2.97
3339 3427 8.481314 TGTTGTTCAATCTTAGAGATCATAGCT 58.519 33.333 0.00 0.00 32.89 3.32
3340 3428 9.973450 GTTGTTCAATCTTAGAGATCATAGCTA 57.027 33.333 0.00 0.00 32.89 3.32
3342 3430 9.579932 TGTTCAATCTTAGAGATCATAGCTAGA 57.420 33.333 0.00 0.00 32.89 2.43
3347 3435 9.927668 AATCTTAGAGATCATAGCTAGAAAAGC 57.072 33.333 0.00 0.00 42.21 3.51
3348 3436 9.087871 ATCTTAGAGATCATAGCTAGAAAAGCA 57.912 33.333 0.00 0.00 41.75 3.91
3360 3448 5.619625 CTAGAAAAGCAAGTTGGAGGAAG 57.380 43.478 4.75 0.00 0.00 3.46
3361 3449 3.903467 AGAAAAGCAAGTTGGAGGAAGT 58.097 40.909 4.75 0.00 0.00 3.01
3362 3450 5.048846 AGAAAAGCAAGTTGGAGGAAGTA 57.951 39.130 4.75 0.00 0.00 2.24
3363 3451 5.445964 AGAAAAGCAAGTTGGAGGAAGTAA 58.554 37.500 4.75 0.00 0.00 2.24
3364 3452 5.891551 AGAAAAGCAAGTTGGAGGAAGTAAA 59.108 36.000 4.75 0.00 0.00 2.01
3365 3453 6.379988 AGAAAAGCAAGTTGGAGGAAGTAAAA 59.620 34.615 4.75 0.00 0.00 1.52
3366 3454 6.538945 AAAGCAAGTTGGAGGAAGTAAAAA 57.461 33.333 4.75 0.00 0.00 1.94
3387 3475 6.694877 AAAACAAGAGAACTTAAGGTGGTC 57.305 37.500 7.53 0.00 34.70 4.02
3388 3476 5.632034 AACAAGAGAACTTAAGGTGGTCT 57.368 39.130 7.53 1.78 34.70 3.85
3389 3477 4.962155 ACAAGAGAACTTAAGGTGGTCTG 58.038 43.478 7.53 0.35 34.70 3.51
3390 3478 4.654262 ACAAGAGAACTTAAGGTGGTCTGA 59.346 41.667 7.53 0.00 34.70 3.27
3391 3479 5.221541 ACAAGAGAACTTAAGGTGGTCTGAG 60.222 44.000 7.53 4.50 34.70 3.35
3392 3480 3.835395 AGAGAACTTAAGGTGGTCTGAGG 59.165 47.826 7.53 0.00 0.00 3.86
3393 3481 3.579151 GAGAACTTAAGGTGGTCTGAGGT 59.421 47.826 7.53 0.00 0.00 3.85
3394 3482 3.579151 AGAACTTAAGGTGGTCTGAGGTC 59.421 47.826 7.53 0.00 0.00 3.85
3395 3483 2.972348 ACTTAAGGTGGTCTGAGGTCA 58.028 47.619 7.53 0.00 0.00 4.02
3396 3484 3.314693 ACTTAAGGTGGTCTGAGGTCAA 58.685 45.455 7.53 0.00 0.00 3.18
3397 3485 3.910627 ACTTAAGGTGGTCTGAGGTCAAT 59.089 43.478 7.53 0.00 0.00 2.57
3398 3486 4.351111 ACTTAAGGTGGTCTGAGGTCAATT 59.649 41.667 7.53 0.00 0.00 2.32
3399 3487 2.867109 AGGTGGTCTGAGGTCAATTG 57.133 50.000 0.00 0.00 0.00 2.32
3400 3488 2.338809 AGGTGGTCTGAGGTCAATTGA 58.661 47.619 3.38 3.38 0.00 2.57
3401 3489 2.039084 AGGTGGTCTGAGGTCAATTGAC 59.961 50.000 27.16 27.16 44.04 3.18
3402 3490 2.224523 GGTGGTCTGAGGTCAATTGACA 60.225 50.000 33.42 16.87 46.47 3.58
3403 3491 3.476552 GTGGTCTGAGGTCAATTGACAA 58.523 45.455 33.42 20.06 46.47 3.18
3404 3492 3.499918 GTGGTCTGAGGTCAATTGACAAG 59.500 47.826 33.42 26.42 46.47 3.16
3405 3493 2.485814 GGTCTGAGGTCAATTGACAAGC 59.514 50.000 33.42 23.13 46.47 4.01
3406 3494 2.158449 GTCTGAGGTCAATTGACAAGCG 59.842 50.000 33.42 20.74 46.47 4.68
3407 3495 0.874390 TGAGGTCAATTGACAAGCGC 59.126 50.000 33.42 20.82 46.47 5.92
3408 3496 0.874390 GAGGTCAATTGACAAGCGCA 59.126 50.000 33.42 0.00 46.47 6.09
3409 3497 1.266718 GAGGTCAATTGACAAGCGCAA 59.733 47.619 33.42 0.00 46.47 4.85
3410 3498 1.680735 AGGTCAATTGACAAGCGCAAA 59.319 42.857 33.42 0.00 46.47 3.68
3411 3499 2.053627 GGTCAATTGACAAGCGCAAAG 58.946 47.619 33.42 0.19 46.47 2.77
3412 3500 2.543653 GGTCAATTGACAAGCGCAAAGT 60.544 45.455 33.42 4.28 46.47 2.66
3413 3501 2.468777 GTCAATTGACAAGCGCAAAGTG 59.531 45.455 29.43 4.35 44.18 3.16
3414 3502 1.788308 CAATTGACAAGCGCAAAGTGG 59.212 47.619 11.47 0.00 0.00 4.00
3415 3503 0.318955 ATTGACAAGCGCAAAGTGGC 60.319 50.000 11.47 4.54 0.00 5.01
3416 3504 1.661498 TTGACAAGCGCAAAGTGGCA 61.661 50.000 11.47 7.59 0.00 4.92
3417 3505 1.065600 GACAAGCGCAAAGTGGCAA 59.934 52.632 11.47 0.00 0.00 4.52
3418 3506 0.318955 GACAAGCGCAAAGTGGCAAT 60.319 50.000 11.47 0.00 0.00 3.56
3419 3507 0.318955 ACAAGCGCAAAGTGGCAATC 60.319 50.000 11.47 0.00 0.00 2.67
3420 3508 0.318869 CAAGCGCAAAGTGGCAATCA 60.319 50.000 11.47 0.00 0.00 2.57
3421 3509 0.388659 AAGCGCAAAGTGGCAATCAA 59.611 45.000 11.47 0.00 0.00 2.57
3422 3510 0.038892 AGCGCAAAGTGGCAATCAAG 60.039 50.000 11.47 0.00 0.00 3.02
3423 3511 1.620413 GCGCAAAGTGGCAATCAAGC 61.620 55.000 0.30 0.00 0.00 4.01
3424 3512 0.318869 CGCAAAGTGGCAATCAAGCA 60.319 50.000 0.00 0.00 35.83 3.91
3425 3513 1.425412 GCAAAGTGGCAATCAAGCAG 58.575 50.000 0.00 0.00 35.83 4.24
3426 3514 1.425412 CAAAGTGGCAATCAAGCAGC 58.575 50.000 0.00 0.00 35.83 5.25
3427 3515 1.042229 AAAGTGGCAATCAAGCAGCA 58.958 45.000 0.00 0.00 35.83 4.41
3428 3516 0.316204 AAGTGGCAATCAAGCAGCAC 59.684 50.000 0.00 0.00 35.83 4.40
3429 3517 0.824595 AGTGGCAATCAAGCAGCACA 60.825 50.000 0.00 0.00 35.83 4.57
3430 3518 0.032403 GTGGCAATCAAGCAGCACAA 59.968 50.000 0.00 0.00 35.83 3.33
3431 3519 0.315886 TGGCAATCAAGCAGCACAAG 59.684 50.000 0.00 0.00 35.83 3.16
3432 3520 0.389426 GGCAATCAAGCAGCACAAGG 60.389 55.000 0.00 0.00 35.83 3.61
3433 3521 1.012486 GCAATCAAGCAGCACAAGGC 61.012 55.000 0.00 0.00 45.30 4.35
3442 3530 3.430862 GCACAAGGCGGCAATCGA 61.431 61.111 13.08 0.00 42.43 3.59
3443 3531 2.976840 GCACAAGGCGGCAATCGAA 61.977 57.895 13.08 0.00 42.43 3.71
3444 3532 1.135315 CACAAGGCGGCAATCGAAG 59.865 57.895 13.08 0.00 42.43 3.79
3445 3533 1.003839 ACAAGGCGGCAATCGAAGA 60.004 52.632 13.08 0.00 42.43 2.87
3446 3534 0.605319 ACAAGGCGGCAATCGAAGAA 60.605 50.000 13.08 0.00 43.58 2.52
3447 3535 0.097674 CAAGGCGGCAATCGAAGAAG 59.902 55.000 13.08 0.00 43.58 2.85
3448 3536 0.036388 AAGGCGGCAATCGAAGAAGA 60.036 50.000 13.08 0.00 43.58 2.87
3449 3537 0.460987 AGGCGGCAATCGAAGAAGAG 60.461 55.000 13.08 0.00 43.58 2.85
3450 3538 0.460284 GGCGGCAATCGAAGAAGAGA 60.460 55.000 3.07 0.00 43.58 3.10
3451 3539 1.359848 GCGGCAATCGAAGAAGAGAA 58.640 50.000 0.00 0.00 43.58 2.87
3452 3540 1.325943 GCGGCAATCGAAGAAGAGAAG 59.674 52.381 0.00 0.00 43.58 2.85
3453 3541 1.325943 CGGCAATCGAAGAAGAGAAGC 59.674 52.381 0.00 0.00 43.58 3.86
3454 3542 1.668237 GGCAATCGAAGAAGAGAAGCC 59.332 52.381 0.00 0.00 43.58 4.35
3455 3543 1.325943 GCAATCGAAGAAGAGAAGCCG 59.674 52.381 0.00 0.00 43.58 5.52
3456 3544 2.881074 CAATCGAAGAAGAGAAGCCGA 58.119 47.619 0.00 0.00 43.58 5.54
3457 3545 2.857152 CAATCGAAGAAGAGAAGCCGAG 59.143 50.000 0.00 0.00 43.58 4.63
3458 3546 1.535833 TCGAAGAAGAGAAGCCGAGT 58.464 50.000 0.00 0.00 0.00 4.18
3459 3547 2.708051 TCGAAGAAGAGAAGCCGAGTA 58.292 47.619 0.00 0.00 0.00 2.59
3460 3548 2.678836 TCGAAGAAGAGAAGCCGAGTAG 59.321 50.000 0.00 0.00 0.00 2.57
3461 3549 2.223386 CGAAGAAGAGAAGCCGAGTAGG 60.223 54.545 0.00 0.00 44.97 3.18
3462 3550 2.810870 AGAAGAGAAGCCGAGTAGGA 57.189 50.000 0.00 0.00 45.00 2.94
3463 3551 3.088789 AGAAGAGAAGCCGAGTAGGAA 57.911 47.619 0.00 0.00 45.00 3.36
3464 3552 3.637769 AGAAGAGAAGCCGAGTAGGAAT 58.362 45.455 0.00 0.00 45.00 3.01
3465 3553 3.383185 AGAAGAGAAGCCGAGTAGGAATG 59.617 47.826 0.00 0.00 45.00 2.67
3466 3554 3.019799 AGAGAAGCCGAGTAGGAATGA 57.980 47.619 0.00 0.00 45.00 2.57
3467 3555 3.571590 AGAGAAGCCGAGTAGGAATGAT 58.428 45.455 0.00 0.00 45.00 2.45
3468 3556 3.320541 AGAGAAGCCGAGTAGGAATGATG 59.679 47.826 0.00 0.00 45.00 3.07
3469 3557 3.034635 AGAAGCCGAGTAGGAATGATGT 58.965 45.455 0.00 0.00 45.00 3.06
3470 3558 2.898729 AGCCGAGTAGGAATGATGTG 57.101 50.000 0.00 0.00 45.00 3.21
3471 3559 2.388735 AGCCGAGTAGGAATGATGTGA 58.611 47.619 0.00 0.00 45.00 3.58
3472 3560 2.101582 AGCCGAGTAGGAATGATGTGAC 59.898 50.000 0.00 0.00 45.00 3.67
3473 3561 2.732366 CCGAGTAGGAATGATGTGACG 58.268 52.381 0.00 0.00 45.00 4.35
3474 3562 2.543861 CCGAGTAGGAATGATGTGACGG 60.544 54.545 0.00 0.00 45.00 4.79
3475 3563 2.099263 CGAGTAGGAATGATGTGACGGT 59.901 50.000 0.00 0.00 0.00 4.83
3476 3564 3.448686 GAGTAGGAATGATGTGACGGTG 58.551 50.000 0.00 0.00 0.00 4.94
3477 3565 2.168521 AGTAGGAATGATGTGACGGTGG 59.831 50.000 0.00 0.00 0.00 4.61
3478 3566 0.392998 AGGAATGATGTGACGGTGGC 60.393 55.000 0.00 0.00 0.00 5.01
3479 3567 1.376609 GGAATGATGTGACGGTGGCC 61.377 60.000 0.00 0.00 0.00 5.36
3480 3568 1.376609 GAATGATGTGACGGTGGCCC 61.377 60.000 0.00 0.00 0.00 5.80
3490 3578 4.734652 GGTGGCCCGATCTTTTGA 57.265 55.556 0.00 0.00 0.00 2.69
3491 3579 3.191182 GGTGGCCCGATCTTTTGAT 57.809 52.632 0.00 0.00 42.82 2.57
3492 3580 1.474330 GGTGGCCCGATCTTTTGATT 58.526 50.000 0.00 0.00 39.67 2.57
3493 3581 2.650322 GGTGGCCCGATCTTTTGATTA 58.350 47.619 0.00 0.00 39.67 1.75
3494 3582 2.618709 GGTGGCCCGATCTTTTGATTAG 59.381 50.000 0.00 0.00 39.67 1.73
3495 3583 3.541632 GTGGCCCGATCTTTTGATTAGA 58.458 45.455 0.00 0.00 39.67 2.10
3496 3584 3.561725 GTGGCCCGATCTTTTGATTAGAG 59.438 47.826 0.00 0.00 39.67 2.43
3497 3585 3.199946 TGGCCCGATCTTTTGATTAGAGT 59.800 43.478 0.00 0.00 39.67 3.24
3498 3586 3.561725 GGCCCGATCTTTTGATTAGAGTG 59.438 47.826 0.00 0.00 39.67 3.51
3499 3587 3.561725 GCCCGATCTTTTGATTAGAGTGG 59.438 47.826 0.00 0.00 39.67 4.00
3500 3588 4.130118 CCCGATCTTTTGATTAGAGTGGG 58.870 47.826 0.00 0.00 39.67 4.61
3501 3589 4.130118 CCGATCTTTTGATTAGAGTGGGG 58.870 47.826 0.00 0.00 39.67 4.96
3502 3590 4.141711 CCGATCTTTTGATTAGAGTGGGGA 60.142 45.833 0.00 0.00 39.67 4.81
3503 3591 5.455326 CCGATCTTTTGATTAGAGTGGGGAT 60.455 44.000 0.00 0.00 39.67 3.85
3504 3592 6.239600 CCGATCTTTTGATTAGAGTGGGGATA 60.240 42.308 0.00 0.00 39.67 2.59
3505 3593 7.217200 CGATCTTTTGATTAGAGTGGGGATAA 58.783 38.462 0.00 0.00 39.67 1.75
3506 3594 7.171678 CGATCTTTTGATTAGAGTGGGGATAAC 59.828 40.741 0.00 0.00 39.67 1.89
3507 3595 7.510675 TCTTTTGATTAGAGTGGGGATAACT 57.489 36.000 0.00 0.00 0.00 2.24
3508 3596 8.618240 TCTTTTGATTAGAGTGGGGATAACTA 57.382 34.615 0.00 0.00 0.00 2.24
3509 3597 9.225682 TCTTTTGATTAGAGTGGGGATAACTAT 57.774 33.333 0.00 0.00 0.00 2.12
3510 3598 9.495572 CTTTTGATTAGAGTGGGGATAACTATC 57.504 37.037 0.00 0.00 0.00 2.08
3511 3599 6.835819 TGATTAGAGTGGGGATAACTATCG 57.164 41.667 0.00 0.00 33.52 2.92
3512 3600 6.549242 TGATTAGAGTGGGGATAACTATCGA 58.451 40.000 0.00 0.00 33.52 3.59
3513 3601 7.182760 TGATTAGAGTGGGGATAACTATCGAT 58.817 38.462 2.16 2.16 33.52 3.59
3514 3602 7.674348 TGATTAGAGTGGGGATAACTATCGATT 59.326 37.037 1.71 0.00 33.52 3.34
3515 3603 5.986501 AGAGTGGGGATAACTATCGATTC 57.013 43.478 1.71 0.00 33.52 2.52
3516 3604 5.646215 AGAGTGGGGATAACTATCGATTCT 58.354 41.667 1.71 0.00 33.52 2.40
3517 3605 6.078664 AGAGTGGGGATAACTATCGATTCTT 58.921 40.000 1.71 0.00 33.52 2.52
3518 3606 6.555360 AGAGTGGGGATAACTATCGATTCTTT 59.445 38.462 1.71 0.00 33.52 2.52
3519 3607 6.525629 AGTGGGGATAACTATCGATTCTTTG 58.474 40.000 1.71 0.00 33.52 2.77
3520 3608 6.326583 AGTGGGGATAACTATCGATTCTTTGA 59.673 38.462 1.71 0.00 33.52 2.69
3521 3609 7.016661 AGTGGGGATAACTATCGATTCTTTGAT 59.983 37.037 1.71 0.00 33.52 2.57
3522 3610 7.118390 GTGGGGATAACTATCGATTCTTTGATG 59.882 40.741 1.71 0.00 33.52 3.07
3523 3611 6.595716 GGGGATAACTATCGATTCTTTGATGG 59.404 42.308 1.71 0.00 33.52 3.51
3524 3612 7.162082 GGGATAACTATCGATTCTTTGATGGT 58.838 38.462 1.71 0.00 38.67 3.55
3525 3613 7.661847 GGGATAACTATCGATTCTTTGATGGTT 59.338 37.037 1.71 8.60 44.86 3.67
3526 3614 9.706691 GGATAACTATCGATTCTTTGATGGTTA 57.293 33.333 1.71 11.71 45.86 2.85
3530 3618 9.613428 AACTATCGATTCTTTGATGGTTATTGA 57.387 29.630 1.71 0.00 42.50 2.57
3531 3619 9.784531 ACTATCGATTCTTTGATGGTTATTGAT 57.215 29.630 1.71 0.00 34.68 2.57
3533 3621 8.915057 ATCGATTCTTTGATGGTTATTGATCT 57.085 30.769 0.00 0.00 0.00 2.75
3534 3622 8.737168 TCGATTCTTTGATGGTTATTGATCTT 57.263 30.769 0.00 0.00 0.00 2.40
3535 3623 8.615211 TCGATTCTTTGATGGTTATTGATCTTG 58.385 33.333 0.00 0.00 0.00 3.02
3536 3624 8.400947 CGATTCTTTGATGGTTATTGATCTTGT 58.599 33.333 0.00 0.00 0.00 3.16
3537 3625 9.727627 GATTCTTTGATGGTTATTGATCTTGTC 57.272 33.333 0.00 0.00 0.00 3.18
3538 3626 7.307493 TCTTTGATGGTTATTGATCTTGTCG 57.693 36.000 0.00 0.00 0.00 4.35
3539 3627 6.878923 TCTTTGATGGTTATTGATCTTGTCGT 59.121 34.615 0.00 0.00 0.00 4.34
3540 3628 8.038351 TCTTTGATGGTTATTGATCTTGTCGTA 58.962 33.333 0.00 0.00 0.00 3.43
3541 3629 7.770801 TTGATGGTTATTGATCTTGTCGTAG 57.229 36.000 0.00 0.00 0.00 3.51
3542 3630 6.280643 TGATGGTTATTGATCTTGTCGTAGG 58.719 40.000 0.00 0.00 0.00 3.18
3543 3631 4.439057 TGGTTATTGATCTTGTCGTAGGC 58.561 43.478 0.00 0.00 0.00 3.93
3544 3632 4.081365 TGGTTATTGATCTTGTCGTAGGCA 60.081 41.667 0.00 0.00 45.30 4.75
3559 3647 2.768253 AGGCACGATCATCTTGAACA 57.232 45.000 0.00 0.00 0.00 3.18
3560 3648 3.057969 AGGCACGATCATCTTGAACAA 57.942 42.857 0.00 0.00 0.00 2.83
3561 3649 2.744202 AGGCACGATCATCTTGAACAAC 59.256 45.455 0.00 0.00 0.00 3.32
3562 3650 2.474526 GGCACGATCATCTTGAACAACG 60.475 50.000 0.00 0.00 0.00 4.10
3563 3651 2.411748 GCACGATCATCTTGAACAACGA 59.588 45.455 0.00 0.00 0.00 3.85
3564 3652 3.482598 GCACGATCATCTTGAACAACGAG 60.483 47.826 0.00 0.00 0.00 4.18
3565 3653 3.061295 CACGATCATCTTGAACAACGAGG 59.939 47.826 0.00 0.00 0.00 4.63
3566 3654 3.254060 CGATCATCTTGAACAACGAGGT 58.746 45.455 0.00 0.00 0.00 3.85
3567 3655 3.679980 CGATCATCTTGAACAACGAGGTT 59.320 43.478 0.00 0.00 0.00 3.50
3568 3656 4.201628 CGATCATCTTGAACAACGAGGTTC 60.202 45.833 14.19 14.19 45.75 3.62
3578 3666 4.261888 CGAGGTTCGTGTTCCTGG 57.738 61.111 0.00 0.00 34.72 4.45
3579 3667 1.663739 CGAGGTTCGTGTTCCTGGA 59.336 57.895 0.00 0.00 34.72 3.86
3580 3668 0.032952 CGAGGTTCGTGTTCCTGGAA 59.967 55.000 4.68 4.68 34.72 3.53
3581 3669 1.797025 GAGGTTCGTGTTCCTGGAAG 58.203 55.000 9.92 0.00 33.83 3.46
3582 3670 0.250338 AGGTTCGTGTTCCTGGAAGC 60.250 55.000 9.92 5.17 38.19 3.86
3583 3671 0.534203 GGTTCGTGTTCCTGGAAGCA 60.534 55.000 9.92 8.36 37.91 3.91
3584 3672 1.305201 GTTCGTGTTCCTGGAAGCAA 58.695 50.000 9.92 0.00 0.00 3.91
3585 3673 1.002792 GTTCGTGTTCCTGGAAGCAAC 60.003 52.381 9.92 7.94 0.00 4.17
3586 3674 0.534203 TCGTGTTCCTGGAAGCAACC 60.534 55.000 9.92 0.00 0.00 3.77
3587 3675 1.841663 CGTGTTCCTGGAAGCAACCG 61.842 60.000 9.92 8.14 0.00 4.44
3588 3676 0.534203 GTGTTCCTGGAAGCAACCGA 60.534 55.000 9.92 0.00 0.00 4.69
3589 3677 0.181587 TGTTCCTGGAAGCAACCGAA 59.818 50.000 9.92 0.00 0.00 4.30
3590 3678 0.875059 GTTCCTGGAAGCAACCGAAG 59.125 55.000 9.92 0.00 0.00 3.79
3591 3679 0.762418 TTCCTGGAAGCAACCGAAGA 59.238 50.000 4.68 0.00 0.00 2.87
3592 3680 0.762418 TCCTGGAAGCAACCGAAGAA 59.238 50.000 0.00 0.00 0.00 2.52
3593 3681 0.875059 CCTGGAAGCAACCGAAGAAC 59.125 55.000 0.00 0.00 0.00 3.01
3594 3682 0.875059 CTGGAAGCAACCGAAGAACC 59.125 55.000 0.00 0.00 0.00 3.62
3595 3683 0.882927 TGGAAGCAACCGAAGAACCG 60.883 55.000 0.00 0.00 0.00 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 9 2.691526 ACAGGGGAAAACGGAAAAACTC 59.308 45.455 0.00 0.00 0.00 3.01
577 610 0.658536 GTTTGACTGCAGCGCTCAAC 60.659 55.000 15.27 9.75 0.00 3.18
598 631 0.108662 TGCACTAGCGACTGACCATG 60.109 55.000 0.00 0.00 46.23 3.66
646 680 2.664436 GGTTTCGAACCCGCGACAG 61.664 63.158 8.23 0.00 46.12 3.51
746 783 3.671928 GTCAAAACGAGTAGCTTTCGCTA 59.328 43.478 17.14 0.00 46.79 4.26
804 841 2.252072 TGCTGTTATGCGAGGGGACC 62.252 60.000 0.00 0.00 42.83 4.46
805 842 1.090052 GTGCTGTTATGCGAGGGGAC 61.090 60.000 0.00 0.00 35.36 4.46
806 843 1.220749 GTGCTGTTATGCGAGGGGA 59.779 57.895 0.00 0.00 35.36 4.81
807 844 0.811616 GAGTGCTGTTATGCGAGGGG 60.812 60.000 0.00 0.00 35.36 4.79
808 845 0.811616 GGAGTGCTGTTATGCGAGGG 60.812 60.000 0.00 0.00 35.36 4.30
809 846 0.108186 TGGAGTGCTGTTATGCGAGG 60.108 55.000 0.00 0.00 35.36 4.63
810 847 1.394917 GTTGGAGTGCTGTTATGCGAG 59.605 52.381 0.00 0.00 35.36 5.03
811 848 1.270571 TGTTGGAGTGCTGTTATGCGA 60.271 47.619 0.00 0.00 35.36 5.10
825 862 3.699038 CCCAGTTCTTTCAACTTGTTGGA 59.301 43.478 12.75 2.04 0.00 3.53
858 895 0.719465 CGATACAGCCCGTGTGAAAC 59.281 55.000 0.00 0.00 40.69 2.78
859 896 0.390603 CCGATACAGCCCGTGTGAAA 60.391 55.000 0.00 0.00 40.69 2.69
906 943 2.883026 ACGCTAGATATCTGGCCTCTT 58.117 47.619 29.00 12.71 46.13 2.85
907 944 2.595750 ACGCTAGATATCTGGCCTCT 57.404 50.000 29.00 13.35 46.13 3.69
908 945 2.094442 GGAACGCTAGATATCTGGCCTC 60.094 54.545 29.00 24.50 46.13 4.70
909 946 1.896465 GGAACGCTAGATATCTGGCCT 59.104 52.381 29.00 19.28 46.13 5.19
910 947 1.618837 TGGAACGCTAGATATCTGGCC 59.381 52.381 29.00 18.18 46.13 5.36
911 948 2.610727 GGTGGAACGCTAGATATCTGGC 60.611 54.545 26.49 26.49 45.52 4.85
912 949 2.628178 TGGTGGAACGCTAGATATCTGG 59.372 50.000 15.79 13.61 38.12 3.86
913 950 3.553096 GGTGGTGGAACGCTAGATATCTG 60.553 52.174 15.79 6.65 38.12 2.90
1031 1068 1.154205 CGTCGGAGCCATTGGTGATC 61.154 60.000 4.26 0.68 0.00 2.92
1418 1455 1.805345 CTTGAGCTGCTTGAGGAACAG 59.195 52.381 2.53 0.00 34.48 3.16
1465 1502 2.551270 CACACGAAGCAACGAGGC 59.449 61.111 9.33 0.00 37.03 4.70
1486 1523 2.256158 CGACCCGTCACGTTAGCA 59.744 61.111 0.00 0.00 0.00 3.49
1526 1564 2.558359 AGCAACAGACCTACCAAAATGC 59.442 45.455 0.00 0.00 0.00 3.56
1538 1576 2.749621 CTCCATGGGTAAAGCAACAGAC 59.250 50.000 13.02 0.00 0.00 3.51
1594 1632 9.686683 ATGTAACAACCTTTCTCAAATAGCTAT 57.313 29.630 0.00 0.00 0.00 2.97
1609 1651 6.976934 AAGGATTCAACAATGTAACAACCT 57.023 33.333 0.00 0.00 0.00 3.50
1745 1787 8.902540 ATCACATTACTAAACACACTGAAGAA 57.097 30.769 0.00 0.00 0.00 2.52
1828 1870 4.753107 GTCCACAAGTACCGAAATTCAAGA 59.247 41.667 0.00 0.00 0.00 3.02
1831 1873 4.062293 CAGTCCACAAGTACCGAAATTCA 58.938 43.478 0.00 0.00 0.00 2.57
1907 1949 5.642491 AGCAGAGGGAATTTACGTAAAACTC 59.358 40.000 23.49 23.43 0.00 3.01
1911 1953 4.901868 ACAGCAGAGGGAATTTACGTAAA 58.098 39.130 22.12 22.12 0.00 2.01
1953 1995 7.103641 TGACAAATAGAAGTGGGACTGATAAC 58.896 38.462 0.00 0.00 0.00 1.89
1954 1996 7.252612 TGACAAATAGAAGTGGGACTGATAA 57.747 36.000 0.00 0.00 0.00 1.75
1956 1998 5.762179 TGACAAATAGAAGTGGGACTGAT 57.238 39.130 0.00 0.00 0.00 2.90
1957 1999 5.013079 ACATGACAAATAGAAGTGGGACTGA 59.987 40.000 0.00 0.00 0.00 3.41
1975 2018 7.615582 TCCAAAATAAGTCATCTCACATGAC 57.384 36.000 0.00 6.62 46.41 3.06
2105 2148 1.534595 GGAAAGTGCAGTGCTTGAGAG 59.465 52.381 17.60 0.00 0.00 3.20
2118 2161 2.875296 TGACTCATTTGGGGGAAAGTG 58.125 47.619 0.00 0.00 0.00 3.16
2171 2216 7.559170 CCATTGATCTTGAAAGGTCCTAAAGAT 59.441 37.037 17.99 17.99 39.63 2.40
2218 2263 1.429423 GCAATGACGTAAGCCTGGC 59.571 57.895 11.65 11.65 45.62 4.85
2369 2414 7.177392 AGGGCATCTAAAAGGATAATAATGCAC 59.823 37.037 0.00 0.00 41.44 4.57
2375 2420 8.168058 GGGTAAAGGGCATCTAAAAGGATAATA 58.832 37.037 0.00 0.00 0.00 0.98
2441 2486 1.999648 AATTCTTGGTTGCCTGCAGA 58.000 45.000 17.39 0.00 0.00 4.26
2465 2510 5.003692 TCTGATCATCCTTCTTGAAGTCG 57.996 43.478 9.21 0.00 0.00 4.18
2491 2536 2.291365 TCATCAACTCGGCATCAATGG 58.709 47.619 0.00 0.00 0.00 3.16
2510 2555 1.606737 GGGACAGCATCGATAGCCTTC 60.607 57.143 13.80 10.89 0.00 3.46
2576 2621 0.249955 TCATCTCATGCGGCTTGTCA 59.750 50.000 14.53 4.33 0.00 3.58
2658 2703 5.241662 AGAAATCAGAAGTACAGAACCAGC 58.758 41.667 0.00 0.00 0.00 4.85
2688 2733 4.022416 TGGAAATCAAAGATTCACCAACCG 60.022 41.667 12.68 0.00 0.00 4.44
2700 2745 4.320788 GGCAGACTTCAGTGGAAATCAAAG 60.321 45.833 0.00 0.00 31.84 2.77
2745 2790 7.291651 CCAATAAAGGGGATGGTACTTCTAGTA 59.708 40.741 0.00 0.00 0.00 1.82
2767 2813 1.531739 AAATGTCGCAACGGGCCAAT 61.532 50.000 4.39 0.00 40.31 3.16
2773 2819 2.679355 TCAAGAAAATGTCGCAACGG 57.321 45.000 0.00 0.00 0.00 4.44
2774 2820 3.163594 GGATCAAGAAAATGTCGCAACG 58.836 45.455 0.00 0.00 0.00 4.10
2787 2833 7.657354 CCTGAATAATACAATGACGGATCAAGA 59.343 37.037 0.00 0.00 38.69 3.02
2788 2834 7.571983 GCCTGAATAATACAATGACGGATCAAG 60.572 40.741 0.00 0.00 38.69 3.02
2789 2835 6.204688 GCCTGAATAATACAATGACGGATCAA 59.795 38.462 0.00 0.00 38.69 2.57
2790 2836 5.700832 GCCTGAATAATACAATGACGGATCA 59.299 40.000 0.00 0.00 39.83 2.92
2791 2837 5.934625 AGCCTGAATAATACAATGACGGATC 59.065 40.000 0.00 0.00 0.00 3.36
2792 2838 5.702670 CAGCCTGAATAATACAATGACGGAT 59.297 40.000 0.00 0.00 0.00 4.18
2793 2839 5.056480 CAGCCTGAATAATACAATGACGGA 58.944 41.667 0.00 0.00 0.00 4.69
2794 2840 4.319766 GCAGCCTGAATAATACAATGACGG 60.320 45.833 0.00 0.00 0.00 4.79
2795 2841 4.273235 TGCAGCCTGAATAATACAATGACG 59.727 41.667 0.00 0.00 0.00 4.35
2796 2842 5.756195 TGCAGCCTGAATAATACAATGAC 57.244 39.130 0.00 0.00 0.00 3.06
2797 2843 6.964807 ATTGCAGCCTGAATAATACAATGA 57.035 33.333 0.00 0.00 0.00 2.57
2798 2844 7.381408 CAGAATTGCAGCCTGAATAATACAATG 59.619 37.037 0.00 0.00 0.00 2.82
2799 2845 7.286087 TCAGAATTGCAGCCTGAATAATACAAT 59.714 33.333 10.92 0.00 34.38 2.71
2800 2846 6.602803 TCAGAATTGCAGCCTGAATAATACAA 59.397 34.615 10.92 0.00 34.38 2.41
2801 2847 6.121590 TCAGAATTGCAGCCTGAATAATACA 58.878 36.000 10.92 0.00 34.38 2.29
2802 2848 6.261826 ACTCAGAATTGCAGCCTGAATAATAC 59.738 38.462 13.33 0.00 36.61 1.89
2803 2849 6.359804 ACTCAGAATTGCAGCCTGAATAATA 58.640 36.000 13.33 0.00 36.61 0.98
2804 2850 5.198965 ACTCAGAATTGCAGCCTGAATAAT 58.801 37.500 13.33 0.00 36.61 1.28
2805 2851 4.592942 ACTCAGAATTGCAGCCTGAATAA 58.407 39.130 13.33 0.00 36.61 1.40
2806 2852 4.226427 ACTCAGAATTGCAGCCTGAATA 57.774 40.909 13.33 0.00 36.61 1.75
2807 2853 3.083122 ACTCAGAATTGCAGCCTGAAT 57.917 42.857 13.33 3.99 36.61 2.57
2808 2854 2.574006 ACTCAGAATTGCAGCCTGAA 57.426 45.000 13.33 0.00 36.61 3.02
2809 2855 3.701205 TTACTCAGAATTGCAGCCTGA 57.299 42.857 12.22 12.22 35.81 3.86
2810 2856 4.157289 ACATTTACTCAGAATTGCAGCCTG 59.843 41.667 5.92 5.92 0.00 4.85
2811 2857 4.338879 ACATTTACTCAGAATTGCAGCCT 58.661 39.130 0.00 0.00 0.00 4.58
2812 2858 4.708726 ACATTTACTCAGAATTGCAGCC 57.291 40.909 0.00 0.00 0.00 4.85
2813 2859 8.693542 ATAAAACATTTACTCAGAATTGCAGC 57.306 30.769 0.00 0.00 0.00 5.25
2828 2874 9.362539 GCACAATGATCAGAAGATAAAACATTT 57.637 29.630 0.09 0.00 33.72 2.32
2829 2875 8.525316 TGCACAATGATCAGAAGATAAAACATT 58.475 29.630 0.09 0.00 33.72 2.71
2830 2876 8.058667 TGCACAATGATCAGAAGATAAAACAT 57.941 30.769 0.09 0.00 33.72 2.71
2831 2877 7.451501 TGCACAATGATCAGAAGATAAAACA 57.548 32.000 0.09 0.00 33.72 2.83
2832 2878 8.186163 TCATGCACAATGATCAGAAGATAAAAC 58.814 33.333 0.09 0.00 40.50 2.43
2833 2879 8.186163 GTCATGCACAATGATCAGAAGATAAAA 58.814 33.333 0.09 0.00 46.90 1.52
2834 2880 7.466320 CGTCATGCACAATGATCAGAAGATAAA 60.466 37.037 0.09 0.00 46.90 1.40
2835 2881 6.018507 CGTCATGCACAATGATCAGAAGATAA 60.019 38.462 0.09 0.00 46.90 1.75
2836 2882 5.464389 CGTCATGCACAATGATCAGAAGATA 59.536 40.000 0.09 0.00 46.90 1.98
2837 2883 4.272748 CGTCATGCACAATGATCAGAAGAT 59.727 41.667 0.09 0.00 46.90 2.40
2838 2884 3.619929 CGTCATGCACAATGATCAGAAGA 59.380 43.478 0.09 0.00 46.90 2.87
2839 2885 3.787805 GCGTCATGCACAATGATCAGAAG 60.788 47.826 0.09 0.00 46.90 2.85
2840 2886 2.096335 GCGTCATGCACAATGATCAGAA 59.904 45.455 0.09 0.00 46.90 3.02
2841 2887 1.667212 GCGTCATGCACAATGATCAGA 59.333 47.619 0.09 0.00 46.90 3.27
2842 2888 1.268386 GGCGTCATGCACAATGATCAG 60.268 52.381 0.09 0.00 46.90 2.90
2843 2889 0.734309 GGCGTCATGCACAATGATCA 59.266 50.000 0.00 0.00 46.90 2.92
2844 2890 0.734309 TGGCGTCATGCACAATGATC 59.266 50.000 0.00 0.00 46.90 2.92
2845 2891 1.395635 ATGGCGTCATGCACAATGAT 58.604 45.000 0.00 0.00 46.90 2.45
2853 2899 2.634982 TCAAGAAAATGGCGTCATGC 57.365 45.000 1.74 0.00 45.38 4.06
2854 2900 3.699067 GGATCAAGAAAATGGCGTCATG 58.301 45.455 1.74 0.00 33.18 3.07
2855 2901 2.355756 CGGATCAAGAAAATGGCGTCAT 59.644 45.455 0.00 0.00 34.56 3.06
2856 2902 1.737236 CGGATCAAGAAAATGGCGTCA 59.263 47.619 0.00 0.00 0.00 4.35
2857 2903 1.737793 ACGGATCAAGAAAATGGCGTC 59.262 47.619 0.00 0.00 0.00 5.19
2858 2904 1.737793 GACGGATCAAGAAAATGGCGT 59.262 47.619 0.00 0.00 0.00 5.68
2859 2905 1.267532 CGACGGATCAAGAAAATGGCG 60.268 52.381 0.00 0.00 0.00 5.69
2860 2906 1.737793 ACGACGGATCAAGAAAATGGC 59.262 47.619 0.00 0.00 0.00 4.40
2861 2907 3.000041 TGACGACGGATCAAGAAAATGG 59.000 45.455 0.00 0.00 0.00 3.16
2862 2908 4.864916 ATGACGACGGATCAAGAAAATG 57.135 40.909 0.00 0.00 0.00 2.32
2863 2909 8.833231 ATAATATGACGACGGATCAAGAAAAT 57.167 30.769 0.00 0.00 0.00 1.82
2864 2910 8.657074 AATAATATGACGACGGATCAAGAAAA 57.343 30.769 0.00 0.00 0.00 2.29
2865 2911 7.923878 TGAATAATATGACGACGGATCAAGAAA 59.076 33.333 0.00 0.00 0.00 2.52
2866 2912 7.430441 TGAATAATATGACGACGGATCAAGAA 58.570 34.615 0.00 0.00 0.00 2.52
2882 2928 6.000219 ACTCGAATTGCAGCCTGAATAATAT 59.000 36.000 0.00 0.00 0.00 1.28
2914 2960 8.282592 GCGTCATGCACAATAATAAGAAGATAA 58.717 33.333 0.00 0.00 45.45 1.75
2915 2961 7.796838 GCGTCATGCACAATAATAAGAAGATA 58.203 34.615 0.00 0.00 45.45 1.98
2916 2962 6.662616 GCGTCATGCACAATAATAAGAAGAT 58.337 36.000 0.00 0.00 45.45 2.40
2917 2963 6.048073 GCGTCATGCACAATAATAAGAAGA 57.952 37.500 0.00 0.00 45.45 2.87
2932 2978 2.634982 TCAAGAAAATGGCGTCATGC 57.365 45.000 1.74 0.00 45.38 4.06
2933 2979 3.699067 GGATCAAGAAAATGGCGTCATG 58.301 45.455 1.74 0.00 33.18 3.07
2934 2980 2.355756 CGGATCAAGAAAATGGCGTCAT 59.644 45.455 0.00 0.00 34.56 3.06
2935 2981 1.737236 CGGATCAAGAAAATGGCGTCA 59.263 47.619 0.00 0.00 0.00 4.35
2936 2982 1.737793 ACGGATCAAGAAAATGGCGTC 59.262 47.619 0.00 0.00 0.00 5.19
2937 2983 1.737793 GACGGATCAAGAAAATGGCGT 59.262 47.619 0.00 0.00 0.00 5.68
2938 2984 1.267532 CGACGGATCAAGAAAATGGCG 60.268 52.381 0.00 0.00 0.00 5.69
2939 2985 1.737793 ACGACGGATCAAGAAAATGGC 59.262 47.619 0.00 0.00 0.00 4.40
2940 2986 2.029244 CGACGACGGATCAAGAAAATGG 59.971 50.000 0.00 0.00 35.72 3.16
2941 2987 2.666508 ACGACGACGGATCAAGAAAATG 59.333 45.455 12.58 0.00 44.46 2.32
2942 2988 2.955614 ACGACGACGGATCAAGAAAAT 58.044 42.857 12.58 0.00 44.46 1.82
2943 2989 2.427232 ACGACGACGGATCAAGAAAA 57.573 45.000 12.58 0.00 44.46 2.29
2944 2990 3.770263 ATACGACGACGGATCAAGAAA 57.230 42.857 12.58 0.00 38.93 2.52
2945 2991 3.376234 AGAATACGACGACGGATCAAGAA 59.624 43.478 12.58 0.00 42.74 2.52
2946 2992 2.941064 AGAATACGACGACGGATCAAGA 59.059 45.455 12.58 0.00 42.74 3.02
2947 2993 3.335786 AGAATACGACGACGGATCAAG 57.664 47.619 12.58 0.00 42.74 3.02
2948 2994 3.127376 TGAAGAATACGACGACGGATCAA 59.873 43.478 12.58 0.00 42.74 2.57
2949 2995 2.679336 TGAAGAATACGACGACGGATCA 59.321 45.455 12.58 0.62 42.74 2.92
2950 2996 3.289911 CTGAAGAATACGACGACGGATC 58.710 50.000 12.58 6.67 42.74 3.36
2951 2997 2.033049 CCTGAAGAATACGACGACGGAT 59.967 50.000 12.58 5.57 45.76 4.18
2952 2998 1.399440 CCTGAAGAATACGACGACGGA 59.601 52.381 12.58 2.72 44.46 4.69
2953 2999 1.823828 CCTGAAGAATACGACGACGG 58.176 55.000 12.58 0.00 44.46 4.79
2954 3000 1.189403 GCCTGAAGAATACGACGACG 58.811 55.000 5.58 5.58 45.75 5.12
2955 3001 2.186076 CAGCCTGAAGAATACGACGAC 58.814 52.381 0.00 0.00 0.00 4.34
2956 3002 1.469251 GCAGCCTGAAGAATACGACGA 60.469 52.381 0.00 0.00 0.00 4.20
2957 3003 0.924090 GCAGCCTGAAGAATACGACG 59.076 55.000 0.00 0.00 0.00 5.12
2958 3004 2.301577 AGCAGCCTGAAGAATACGAC 57.698 50.000 0.00 0.00 0.00 4.34
2959 3005 3.005897 GGATAGCAGCCTGAAGAATACGA 59.994 47.826 0.00 0.00 0.00 3.43
2960 3006 3.321497 GGATAGCAGCCTGAAGAATACG 58.679 50.000 0.00 0.00 0.00 3.06
2961 3007 3.005897 TCGGATAGCAGCCTGAAGAATAC 59.994 47.826 0.00 0.00 0.00 1.89
2962 3008 3.230976 TCGGATAGCAGCCTGAAGAATA 58.769 45.455 0.00 0.00 0.00 1.75
2963 3009 2.036992 CTCGGATAGCAGCCTGAAGAAT 59.963 50.000 0.00 0.00 0.00 2.40
2964 3010 1.410517 CTCGGATAGCAGCCTGAAGAA 59.589 52.381 0.00 0.00 0.00 2.52
2965 3011 1.035923 CTCGGATAGCAGCCTGAAGA 58.964 55.000 0.00 0.00 0.00 2.87
2966 3012 0.749649 ACTCGGATAGCAGCCTGAAG 59.250 55.000 0.00 0.00 0.00 3.02
2967 3013 2.067365 TACTCGGATAGCAGCCTGAA 57.933 50.000 0.00 0.00 0.00 3.02
2968 3014 2.067365 TTACTCGGATAGCAGCCTGA 57.933 50.000 0.00 0.00 0.00 3.86
2969 3015 2.890808 TTTACTCGGATAGCAGCCTG 57.109 50.000 0.00 0.00 0.00 4.85
2970 3016 2.700897 ACATTTACTCGGATAGCAGCCT 59.299 45.455 0.00 0.00 0.00 4.58
2971 3017 3.113260 ACATTTACTCGGATAGCAGCC 57.887 47.619 0.00 0.00 0.00 4.85
2972 3018 5.485662 AAAACATTTACTCGGATAGCAGC 57.514 39.130 0.00 0.00 0.00 5.25
2973 3019 8.594881 AGATAAAACATTTACTCGGATAGCAG 57.405 34.615 0.00 0.00 0.00 4.24
2974 3020 8.958119 AAGATAAAACATTTACTCGGATAGCA 57.042 30.769 0.00 0.00 0.00 3.49
2975 3021 9.262358 AGAAGATAAAACATTTACTCGGATAGC 57.738 33.333 0.00 0.00 0.00 2.97
2978 3024 9.838339 ATCAGAAGATAAAACATTTACTCGGAT 57.162 29.630 0.00 0.00 31.14 4.18
2979 3025 9.314321 GATCAGAAGATAAAACATTTACTCGGA 57.686 33.333 0.00 0.00 33.72 4.55
2980 3026 9.098355 TGATCAGAAGATAAAACATTTACTCGG 57.902 33.333 0.00 0.00 33.72 4.63
2986 3032 9.362539 GCACAATGATCAGAAGATAAAACATTT 57.637 29.630 0.09 0.00 33.72 2.32
3024 3070 6.127563 TGACCTACTTGCAAATACATACTCGA 60.128 38.462 0.00 0.00 0.00 4.04
3025 3071 6.040247 TGACCTACTTGCAAATACATACTCG 58.960 40.000 0.00 0.00 0.00 4.18
3026 3072 7.333423 TGTTGACCTACTTGCAAATACATACTC 59.667 37.037 0.00 0.00 0.00 2.59
3027 3073 7.165485 TGTTGACCTACTTGCAAATACATACT 58.835 34.615 0.00 0.00 0.00 2.12
3103 3165 5.234752 TGTTGCAGACTAATGACACGTAAT 58.765 37.500 0.00 0.00 0.00 1.89
3104 3166 4.623002 TGTTGCAGACTAATGACACGTAA 58.377 39.130 0.00 0.00 0.00 3.18
3105 3167 4.245845 TGTTGCAGACTAATGACACGTA 57.754 40.909 0.00 0.00 0.00 3.57
3106 3168 3.106242 TGTTGCAGACTAATGACACGT 57.894 42.857 0.00 0.00 0.00 4.49
3108 3170 4.436050 CGGATTGTTGCAGACTAATGACAC 60.436 45.833 0.00 0.00 0.00 3.67
3145 3207 3.258372 ACGTTTACAAGATCTGCTGGAGA 59.742 43.478 0.07 0.07 34.25 3.71
3208 3270 7.221067 CAGAATAAGTTACGAGATCTGTTGGAC 59.779 40.741 0.00 0.09 0.00 4.02
3221 3283 3.307242 GCACTCTGCCAGAATAAGTTACG 59.693 47.826 0.00 0.00 37.42 3.18
3254 3342 6.258230 TGGACATTTTGCTGATAAGTTGAG 57.742 37.500 0.00 0.00 0.00 3.02
3255 3343 6.489700 TCTTGGACATTTTGCTGATAAGTTGA 59.510 34.615 0.00 0.00 0.00 3.18
3256 3344 6.680810 TCTTGGACATTTTGCTGATAAGTTG 58.319 36.000 0.00 0.00 0.00 3.16
3257 3345 6.899393 TCTTGGACATTTTGCTGATAAGTT 57.101 33.333 0.00 0.00 0.00 2.66
3258 3346 6.660521 TCATCTTGGACATTTTGCTGATAAGT 59.339 34.615 0.00 0.00 0.00 2.24
3259 3347 7.092137 TCATCTTGGACATTTTGCTGATAAG 57.908 36.000 0.00 0.00 0.00 1.73
3260 3348 7.649533 ATCATCTTGGACATTTTGCTGATAA 57.350 32.000 0.00 0.00 0.00 1.75
3261 3349 7.994911 AGTATCATCTTGGACATTTTGCTGATA 59.005 33.333 0.00 0.00 0.00 2.15
3262 3350 6.832384 AGTATCATCTTGGACATTTTGCTGAT 59.168 34.615 0.00 0.00 0.00 2.90
3263 3351 6.182627 AGTATCATCTTGGACATTTTGCTGA 58.817 36.000 0.00 0.00 0.00 4.26
3264 3352 6.446781 AGTATCATCTTGGACATTTTGCTG 57.553 37.500 0.00 0.00 0.00 4.41
3265 3353 5.591877 GGAGTATCATCTTGGACATTTTGCT 59.408 40.000 0.00 0.00 36.25 3.91
3266 3354 5.221126 GGGAGTATCATCTTGGACATTTTGC 60.221 44.000 0.00 0.00 36.25 3.68
3267 3355 6.125029 AGGGAGTATCATCTTGGACATTTTG 58.875 40.000 0.00 0.00 36.25 2.44
3268 3356 6.159398 AGAGGGAGTATCATCTTGGACATTTT 59.841 38.462 0.00 0.00 36.25 1.82
3269 3357 5.669447 AGAGGGAGTATCATCTTGGACATTT 59.331 40.000 0.00 0.00 36.25 2.32
3270 3358 5.071519 CAGAGGGAGTATCATCTTGGACATT 59.928 44.000 0.00 0.00 36.25 2.71
3271 3359 4.592351 CAGAGGGAGTATCATCTTGGACAT 59.408 45.833 0.00 0.00 36.25 3.06
3272 3360 3.963374 CAGAGGGAGTATCATCTTGGACA 59.037 47.826 0.00 0.00 36.25 4.02
3273 3361 4.219115 TCAGAGGGAGTATCATCTTGGAC 58.781 47.826 0.00 0.00 36.25 4.02
3274 3362 4.542906 TCAGAGGGAGTATCATCTTGGA 57.457 45.455 0.00 0.00 36.25 3.53
3275 3363 4.592351 ACATCAGAGGGAGTATCATCTTGG 59.408 45.833 0.00 0.00 36.25 3.61
3276 3364 5.303845 TCACATCAGAGGGAGTATCATCTTG 59.696 44.000 0.00 0.00 36.25 3.02
3277 3365 5.462240 TCACATCAGAGGGAGTATCATCTT 58.538 41.667 0.00 0.00 36.25 2.40
3278 3366 5.072129 TCACATCAGAGGGAGTATCATCT 57.928 43.478 0.00 0.00 36.25 2.90
3279 3367 5.798125 TTCACATCAGAGGGAGTATCATC 57.202 43.478 0.00 0.00 36.25 2.92
3280 3368 6.760440 ATTTCACATCAGAGGGAGTATCAT 57.240 37.500 0.00 0.00 36.25 2.45
3281 3369 7.290948 ACATATTTCACATCAGAGGGAGTATCA 59.709 37.037 0.00 0.00 36.25 2.15
3282 3370 7.675062 ACATATTTCACATCAGAGGGAGTATC 58.325 38.462 0.00 0.00 0.00 2.24
3313 3401 8.481314 AGCTATGATCTCTAAGATTGAACAACA 58.519 33.333 0.00 0.00 34.53 3.33
3321 3409 9.927668 GCTTTTCTAGCTATGATCTCTAAGATT 57.072 33.333 0.00 0.00 46.77 2.40
3338 3426 5.066593 ACTTCCTCCAACTTGCTTTTCTAG 58.933 41.667 0.00 0.00 0.00 2.43
3339 3427 5.048846 ACTTCCTCCAACTTGCTTTTCTA 57.951 39.130 0.00 0.00 0.00 2.10
3340 3428 3.903467 ACTTCCTCCAACTTGCTTTTCT 58.097 40.909 0.00 0.00 0.00 2.52
3341 3429 5.767816 TTACTTCCTCCAACTTGCTTTTC 57.232 39.130 0.00 0.00 0.00 2.29
3342 3430 6.538945 TTTTACTTCCTCCAACTTGCTTTT 57.461 33.333 0.00 0.00 0.00 2.27
3343 3431 6.538945 TTTTTACTTCCTCCAACTTGCTTT 57.461 33.333 0.00 0.00 0.00 3.51
3363 3451 6.890268 AGACCACCTTAAGTTCTCTTGTTTTT 59.110 34.615 0.97 0.00 35.36 1.94
3364 3452 6.318900 CAGACCACCTTAAGTTCTCTTGTTTT 59.681 38.462 0.97 0.00 35.36 2.43
3365 3453 5.823045 CAGACCACCTTAAGTTCTCTTGTTT 59.177 40.000 0.97 0.00 35.36 2.83
3366 3454 5.130477 TCAGACCACCTTAAGTTCTCTTGTT 59.870 40.000 0.97 0.00 35.36 2.83
3367 3455 4.654262 TCAGACCACCTTAAGTTCTCTTGT 59.346 41.667 0.97 0.00 35.36 3.16
3368 3456 5.215252 TCAGACCACCTTAAGTTCTCTTG 57.785 43.478 0.97 0.00 35.36 3.02
3369 3457 4.284746 CCTCAGACCACCTTAAGTTCTCTT 59.715 45.833 0.97 0.00 37.65 2.85
3370 3458 3.835395 CCTCAGACCACCTTAAGTTCTCT 59.165 47.826 0.97 0.00 0.00 3.10
3371 3459 3.579151 ACCTCAGACCACCTTAAGTTCTC 59.421 47.826 0.97 0.00 0.00 2.87
3372 3460 3.579151 GACCTCAGACCACCTTAAGTTCT 59.421 47.826 0.97 0.00 0.00 3.01
3373 3461 3.323979 TGACCTCAGACCACCTTAAGTTC 59.676 47.826 0.97 0.00 0.00 3.01
3374 3462 3.314693 TGACCTCAGACCACCTTAAGTT 58.685 45.455 0.97 0.00 0.00 2.66
3375 3463 2.972348 TGACCTCAGACCACCTTAAGT 58.028 47.619 0.97 0.00 0.00 2.24
3376 3464 4.559862 ATTGACCTCAGACCACCTTAAG 57.440 45.455 0.00 0.00 0.00 1.85
3377 3465 4.349636 TCAATTGACCTCAGACCACCTTAA 59.650 41.667 3.38 0.00 0.00 1.85
3378 3466 3.907474 TCAATTGACCTCAGACCACCTTA 59.093 43.478 3.38 0.00 0.00 2.69
3379 3467 2.711009 TCAATTGACCTCAGACCACCTT 59.289 45.455 3.38 0.00 0.00 3.50
3380 3468 2.039084 GTCAATTGACCTCAGACCACCT 59.961 50.000 25.26 0.00 39.07 4.00
3381 3469 2.224523 TGTCAATTGACCTCAGACCACC 60.225 50.000 30.66 6.71 44.15 4.61
3382 3470 3.126001 TGTCAATTGACCTCAGACCAC 57.874 47.619 30.66 7.74 44.15 4.16
3383 3471 3.743521 CTTGTCAATTGACCTCAGACCA 58.256 45.455 30.66 10.98 44.15 4.02
3384 3472 2.485814 GCTTGTCAATTGACCTCAGACC 59.514 50.000 30.66 11.83 44.15 3.85
3385 3473 2.158449 CGCTTGTCAATTGACCTCAGAC 59.842 50.000 30.66 18.56 44.15 3.51
3386 3474 2.416747 CGCTTGTCAATTGACCTCAGA 58.583 47.619 30.66 12.98 44.15 3.27
3387 3475 1.135859 GCGCTTGTCAATTGACCTCAG 60.136 52.381 30.66 23.93 44.15 3.35
3388 3476 0.874390 GCGCTTGTCAATTGACCTCA 59.126 50.000 30.66 16.49 44.15 3.86
3389 3477 0.874390 TGCGCTTGTCAATTGACCTC 59.126 50.000 30.66 19.54 44.15 3.85
3390 3478 1.317613 TTGCGCTTGTCAATTGACCT 58.682 45.000 30.66 0.00 44.15 3.85
3391 3479 2.053627 CTTTGCGCTTGTCAATTGACC 58.946 47.619 30.66 17.76 44.15 4.02
3392 3480 2.468777 CACTTTGCGCTTGTCAATTGAC 59.531 45.455 28.10 28.10 44.97 3.18
3393 3481 2.543445 CCACTTTGCGCTTGTCAATTGA 60.543 45.455 9.73 3.38 0.00 2.57
3394 3482 1.788308 CCACTTTGCGCTTGTCAATTG 59.212 47.619 9.73 0.00 0.00 2.32
3395 3483 1.869342 GCCACTTTGCGCTTGTCAATT 60.869 47.619 9.73 0.00 0.00 2.32
3396 3484 0.318955 GCCACTTTGCGCTTGTCAAT 60.319 50.000 9.73 0.00 0.00 2.57
3397 3485 1.065600 GCCACTTTGCGCTTGTCAA 59.934 52.632 9.73 0.00 0.00 3.18
3398 3486 1.661498 TTGCCACTTTGCGCTTGTCA 61.661 50.000 9.73 0.00 0.00 3.58
3399 3487 0.318955 ATTGCCACTTTGCGCTTGTC 60.319 50.000 9.73 0.00 0.00 3.18
3400 3488 0.318955 GATTGCCACTTTGCGCTTGT 60.319 50.000 9.73 1.31 0.00 3.16
3401 3489 0.318869 TGATTGCCACTTTGCGCTTG 60.319 50.000 9.73 0.58 0.00 4.01
3402 3490 0.388659 TTGATTGCCACTTTGCGCTT 59.611 45.000 9.73 0.00 0.00 4.68
3403 3491 0.038892 CTTGATTGCCACTTTGCGCT 60.039 50.000 9.73 0.00 0.00 5.92
3404 3492 1.620413 GCTTGATTGCCACTTTGCGC 61.620 55.000 0.00 0.00 0.00 6.09
3405 3493 0.318869 TGCTTGATTGCCACTTTGCG 60.319 50.000 0.00 0.00 0.00 4.85
3406 3494 1.425412 CTGCTTGATTGCCACTTTGC 58.575 50.000 0.00 0.00 0.00 3.68
3407 3495 1.269883 TGCTGCTTGATTGCCACTTTG 60.270 47.619 0.00 0.00 0.00 2.77
3408 3496 1.042229 TGCTGCTTGATTGCCACTTT 58.958 45.000 0.00 0.00 0.00 2.66
3409 3497 0.316204 GTGCTGCTTGATTGCCACTT 59.684 50.000 0.00 0.00 0.00 3.16
3410 3498 0.824595 TGTGCTGCTTGATTGCCACT 60.825 50.000 0.00 0.00 0.00 4.00
3411 3499 0.032403 TTGTGCTGCTTGATTGCCAC 59.968 50.000 0.00 0.00 0.00 5.01
3412 3500 0.315886 CTTGTGCTGCTTGATTGCCA 59.684 50.000 0.00 0.00 0.00 4.92
3413 3501 0.389426 CCTTGTGCTGCTTGATTGCC 60.389 55.000 0.00 0.00 0.00 4.52
3414 3502 1.012486 GCCTTGTGCTGCTTGATTGC 61.012 55.000 0.00 0.00 36.87 3.56
3415 3503 0.731514 CGCCTTGTGCTGCTTGATTG 60.732 55.000 0.00 0.00 38.05 2.67
3416 3504 1.582968 CGCCTTGTGCTGCTTGATT 59.417 52.632 0.00 0.00 38.05 2.57
3417 3505 2.338015 CCGCCTTGTGCTGCTTGAT 61.338 57.895 0.00 0.00 38.05 2.57
3418 3506 2.979676 CCGCCTTGTGCTGCTTGA 60.980 61.111 0.00 0.00 38.05 3.02
3419 3507 4.712425 GCCGCCTTGTGCTGCTTG 62.712 66.667 0.00 0.00 45.67 4.01
3423 3511 2.180017 GATTGCCGCCTTGTGCTG 59.820 61.111 0.00 0.00 38.05 4.41
3424 3512 3.434319 CGATTGCCGCCTTGTGCT 61.434 61.111 0.00 0.00 38.05 4.40
3425 3513 2.855728 CTTCGATTGCCGCCTTGTGC 62.856 60.000 0.00 0.00 38.37 4.57
3426 3514 1.135315 CTTCGATTGCCGCCTTGTG 59.865 57.895 0.00 0.00 38.37 3.33
3427 3515 0.605319 TTCTTCGATTGCCGCCTTGT 60.605 50.000 0.00 0.00 38.37 3.16
3428 3516 0.097674 CTTCTTCGATTGCCGCCTTG 59.902 55.000 0.00 0.00 38.37 3.61
3429 3517 0.036388 TCTTCTTCGATTGCCGCCTT 60.036 50.000 0.00 0.00 38.37 4.35
3430 3518 0.460987 CTCTTCTTCGATTGCCGCCT 60.461 55.000 0.00 0.00 38.37 5.52
3431 3519 0.460284 TCTCTTCTTCGATTGCCGCC 60.460 55.000 0.00 0.00 38.37 6.13
3432 3520 1.325943 CTTCTCTTCTTCGATTGCCGC 59.674 52.381 0.00 0.00 38.37 6.53
3433 3521 1.325943 GCTTCTCTTCTTCGATTGCCG 59.674 52.381 0.00 0.00 40.25 5.69
3434 3522 1.668237 GGCTTCTCTTCTTCGATTGCC 59.332 52.381 0.00 0.00 0.00 4.52
3435 3523 1.325943 CGGCTTCTCTTCTTCGATTGC 59.674 52.381 0.00 0.00 0.00 3.56
3436 3524 2.857152 CTCGGCTTCTCTTCTTCGATTG 59.143 50.000 0.00 0.00 0.00 2.67
3437 3525 2.494073 ACTCGGCTTCTCTTCTTCGATT 59.506 45.455 0.00 0.00 0.00 3.34
3438 3526 2.096248 ACTCGGCTTCTCTTCTTCGAT 58.904 47.619 0.00 0.00 0.00 3.59
3439 3527 1.535833 ACTCGGCTTCTCTTCTTCGA 58.464 50.000 0.00 0.00 0.00 3.71
3440 3528 2.223386 CCTACTCGGCTTCTCTTCTTCG 60.223 54.545 0.00 0.00 0.00 3.79
3441 3529 3.018149 TCCTACTCGGCTTCTCTTCTTC 58.982 50.000 0.00 0.00 0.00 2.87
3442 3530 3.088789 TCCTACTCGGCTTCTCTTCTT 57.911 47.619 0.00 0.00 0.00 2.52
3443 3531 2.810870 TCCTACTCGGCTTCTCTTCT 57.189 50.000 0.00 0.00 0.00 2.85
3444 3532 3.381908 TCATTCCTACTCGGCTTCTCTTC 59.618 47.826 0.00 0.00 0.00 2.87
3445 3533 3.366396 TCATTCCTACTCGGCTTCTCTT 58.634 45.455 0.00 0.00 0.00 2.85
3446 3534 3.019799 TCATTCCTACTCGGCTTCTCT 57.980 47.619 0.00 0.00 0.00 3.10
3447 3535 3.068873 ACATCATTCCTACTCGGCTTCTC 59.931 47.826 0.00 0.00 0.00 2.87
3448 3536 3.034635 ACATCATTCCTACTCGGCTTCT 58.965 45.455 0.00 0.00 0.00 2.85
3449 3537 3.126831 CACATCATTCCTACTCGGCTTC 58.873 50.000 0.00 0.00 0.00 3.86
3450 3538 2.766263 TCACATCATTCCTACTCGGCTT 59.234 45.455 0.00 0.00 0.00 4.35
3451 3539 2.101582 GTCACATCATTCCTACTCGGCT 59.898 50.000 0.00 0.00 0.00 5.52
3452 3540 2.474816 GTCACATCATTCCTACTCGGC 58.525 52.381 0.00 0.00 0.00 5.54
3453 3541 2.543861 CCGTCACATCATTCCTACTCGG 60.544 54.545 0.00 0.00 0.00 4.63
3454 3542 2.099263 ACCGTCACATCATTCCTACTCG 59.901 50.000 0.00 0.00 0.00 4.18
3455 3543 3.448686 CACCGTCACATCATTCCTACTC 58.551 50.000 0.00 0.00 0.00 2.59
3456 3544 2.168521 CCACCGTCACATCATTCCTACT 59.831 50.000 0.00 0.00 0.00 2.57
3457 3545 2.550978 CCACCGTCACATCATTCCTAC 58.449 52.381 0.00 0.00 0.00 3.18
3458 3546 1.134521 GCCACCGTCACATCATTCCTA 60.135 52.381 0.00 0.00 0.00 2.94
3459 3547 0.392998 GCCACCGTCACATCATTCCT 60.393 55.000 0.00 0.00 0.00 3.36
3460 3548 1.376609 GGCCACCGTCACATCATTCC 61.377 60.000 0.00 0.00 0.00 3.01
3461 3549 1.376609 GGGCCACCGTCACATCATTC 61.377 60.000 4.39 0.00 0.00 2.67
3462 3550 1.378514 GGGCCACCGTCACATCATT 60.379 57.895 4.39 0.00 0.00 2.57
3463 3551 2.272146 GGGCCACCGTCACATCAT 59.728 61.111 4.39 0.00 0.00 2.45
3473 3561 1.474330 AATCAAAAGATCGGGCCACC 58.526 50.000 4.39 0.00 0.00 4.61
3474 3562 3.541632 TCTAATCAAAAGATCGGGCCAC 58.458 45.455 4.39 0.00 0.00 5.01
3475 3563 3.199946 ACTCTAATCAAAAGATCGGGCCA 59.800 43.478 4.39 0.00 0.00 5.36
3476 3564 3.561725 CACTCTAATCAAAAGATCGGGCC 59.438 47.826 0.00 0.00 0.00 5.80
3477 3565 3.561725 CCACTCTAATCAAAAGATCGGGC 59.438 47.826 0.00 0.00 0.00 6.13
3478 3566 4.130118 CCCACTCTAATCAAAAGATCGGG 58.870 47.826 0.00 0.00 31.56 5.14
3479 3567 4.130118 CCCCACTCTAATCAAAAGATCGG 58.870 47.826 0.00 0.00 0.00 4.18
3480 3568 5.023533 TCCCCACTCTAATCAAAAGATCG 57.976 43.478 0.00 0.00 0.00 3.69
3481 3569 8.214364 AGTTATCCCCACTCTAATCAAAAGATC 58.786 37.037 0.00 0.00 0.00 2.75
3482 3570 8.107196 AGTTATCCCCACTCTAATCAAAAGAT 57.893 34.615 0.00 0.00 0.00 2.40
3483 3571 7.510675 AGTTATCCCCACTCTAATCAAAAGA 57.489 36.000 0.00 0.00 0.00 2.52
3484 3572 9.495572 GATAGTTATCCCCACTCTAATCAAAAG 57.504 37.037 0.00 0.00 0.00 2.27
3485 3573 8.148351 CGATAGTTATCCCCACTCTAATCAAAA 58.852 37.037 0.00 0.00 0.00 2.44
3486 3574 7.507956 TCGATAGTTATCCCCACTCTAATCAAA 59.492 37.037 0.00 0.00 37.40 2.69
3487 3575 7.008332 TCGATAGTTATCCCCACTCTAATCAA 58.992 38.462 0.00 0.00 37.40 2.57
3488 3576 6.549242 TCGATAGTTATCCCCACTCTAATCA 58.451 40.000 0.00 0.00 37.40 2.57
3489 3577 7.648039 ATCGATAGTTATCCCCACTCTAATC 57.352 40.000 0.00 0.00 37.40 1.75
3490 3578 7.896496 AGAATCGATAGTTATCCCCACTCTAAT 59.104 37.037 0.00 0.00 37.40 1.73
3491 3579 7.239438 AGAATCGATAGTTATCCCCACTCTAA 58.761 38.462 0.00 0.00 37.40 2.10
3492 3580 6.791371 AGAATCGATAGTTATCCCCACTCTA 58.209 40.000 0.00 0.00 37.40 2.43
3493 3581 5.646215 AGAATCGATAGTTATCCCCACTCT 58.354 41.667 0.00 0.00 37.40 3.24
3494 3582 5.986501 AGAATCGATAGTTATCCCCACTC 57.013 43.478 0.00 0.00 37.40 3.51
3495 3583 6.326583 TCAAAGAATCGATAGTTATCCCCACT 59.673 38.462 0.00 0.00 37.40 4.00
3496 3584 6.522054 TCAAAGAATCGATAGTTATCCCCAC 58.478 40.000 0.00 0.00 37.40 4.61
3497 3585 6.740944 TCAAAGAATCGATAGTTATCCCCA 57.259 37.500 0.00 0.00 37.40 4.96
3498 3586 6.595716 CCATCAAAGAATCGATAGTTATCCCC 59.404 42.308 0.00 0.00 37.40 4.81
3499 3587 7.162082 ACCATCAAAGAATCGATAGTTATCCC 58.838 38.462 0.00 0.00 37.40 3.85
3500 3588 8.608844 AACCATCAAAGAATCGATAGTTATCC 57.391 34.615 0.00 0.00 37.40 2.59
3504 3592 9.613428 TCAATAACCATCAAAGAATCGATAGTT 57.387 29.630 0.00 0.00 30.35 2.24
3505 3593 9.784531 ATCAATAACCATCAAAGAATCGATAGT 57.215 29.630 0.00 0.00 37.40 2.12
3508 3596 8.915057 AGATCAATAACCATCAAAGAATCGAT 57.085 30.769 0.00 0.00 0.00 3.59
3509 3597 8.615211 CAAGATCAATAACCATCAAAGAATCGA 58.385 33.333 0.00 0.00 0.00 3.59
3510 3598 8.400947 ACAAGATCAATAACCATCAAAGAATCG 58.599 33.333 0.00 0.00 0.00 3.34
3511 3599 9.727627 GACAAGATCAATAACCATCAAAGAATC 57.272 33.333 0.00 0.00 0.00 2.52
3512 3600 8.400947 CGACAAGATCAATAACCATCAAAGAAT 58.599 33.333 0.00 0.00 0.00 2.40
3513 3601 7.390440 ACGACAAGATCAATAACCATCAAAGAA 59.610 33.333 0.00 0.00 0.00 2.52
3514 3602 6.878923 ACGACAAGATCAATAACCATCAAAGA 59.121 34.615 0.00 0.00 0.00 2.52
3515 3603 7.076842 ACGACAAGATCAATAACCATCAAAG 57.923 36.000 0.00 0.00 0.00 2.77
3516 3604 7.279981 CCTACGACAAGATCAATAACCATCAAA 59.720 37.037 0.00 0.00 0.00 2.69
3517 3605 6.761242 CCTACGACAAGATCAATAACCATCAA 59.239 38.462 0.00 0.00 0.00 2.57
3518 3606 6.280643 CCTACGACAAGATCAATAACCATCA 58.719 40.000 0.00 0.00 0.00 3.07
3519 3607 5.177696 GCCTACGACAAGATCAATAACCATC 59.822 44.000 0.00 0.00 0.00 3.51
3520 3608 5.057149 GCCTACGACAAGATCAATAACCAT 58.943 41.667 0.00 0.00 0.00 3.55
3521 3609 4.081365 TGCCTACGACAAGATCAATAACCA 60.081 41.667 0.00 0.00 0.00 3.67
3522 3610 4.270325 GTGCCTACGACAAGATCAATAACC 59.730 45.833 0.00 0.00 0.00 2.85
3523 3611 5.391060 GTGCCTACGACAAGATCAATAAC 57.609 43.478 0.00 0.00 0.00 1.89
3538 3626 3.521560 TGTTCAAGATGATCGTGCCTAC 58.478 45.455 3.40 3.11 0.00 3.18
3539 3627 3.885724 TGTTCAAGATGATCGTGCCTA 57.114 42.857 3.40 0.00 0.00 3.93
3540 3628 2.744202 GTTGTTCAAGATGATCGTGCCT 59.256 45.455 3.40 0.00 0.00 4.75
3541 3629 2.474526 CGTTGTTCAAGATGATCGTGCC 60.475 50.000 3.40 0.00 0.00 5.01
3542 3630 2.411748 TCGTTGTTCAAGATGATCGTGC 59.588 45.455 3.40 0.00 0.00 5.34
3543 3631 3.061295 CCTCGTTGTTCAAGATGATCGTG 59.939 47.826 1.78 1.78 0.00 4.35
3544 3632 3.254060 CCTCGTTGTTCAAGATGATCGT 58.746 45.455 0.00 0.00 0.00 3.73
3545 3633 3.254060 ACCTCGTTGTTCAAGATGATCG 58.746 45.455 0.00 0.00 0.00 3.69
3546 3634 4.201628 CGAACCTCGTTGTTCAAGATGATC 60.202 45.833 16.14 0.00 43.84 2.92
3547 3635 3.679980 CGAACCTCGTTGTTCAAGATGAT 59.320 43.478 16.14 0.00 43.84 2.45
3548 3636 3.057019 CGAACCTCGTTGTTCAAGATGA 58.943 45.455 16.14 0.00 43.84 2.92
3549 3637 3.439932 CGAACCTCGTTGTTCAAGATG 57.560 47.619 16.14 1.13 43.84 2.90
3561 3649 0.032952 TTCCAGGAACACGAACCTCG 59.967 55.000 0.00 0.00 46.93 4.63
3562 3650 1.797025 CTTCCAGGAACACGAACCTC 58.203 55.000 0.00 0.00 33.91 3.85
3563 3651 0.250338 GCTTCCAGGAACACGAACCT 60.250 55.000 0.00 0.00 36.92 3.50
3564 3652 0.534203 TGCTTCCAGGAACACGAACC 60.534 55.000 0.00 0.00 0.00 3.62
3565 3653 1.002792 GTTGCTTCCAGGAACACGAAC 60.003 52.381 0.00 0.00 44.58 3.95
3566 3654 1.305201 GTTGCTTCCAGGAACACGAA 58.695 50.000 0.00 0.00 44.58 3.85
3567 3655 0.534203 GGTTGCTTCCAGGAACACGA 60.534 55.000 9.93 0.00 46.62 4.35
3568 3656 1.841663 CGGTTGCTTCCAGGAACACG 61.842 60.000 9.93 7.33 46.62 4.49
3569 3657 0.534203 TCGGTTGCTTCCAGGAACAC 60.534 55.000 9.93 0.00 46.62 3.32
3570 3658 0.181587 TTCGGTTGCTTCCAGGAACA 59.818 50.000 9.93 0.00 46.62 3.18
3571 3659 0.875059 CTTCGGTTGCTTCCAGGAAC 59.125 55.000 0.00 0.00 44.49 3.62
3572 3660 0.762418 TCTTCGGTTGCTTCCAGGAA 59.238 50.000 0.71 0.71 0.00 3.36
3573 3661 0.762418 TTCTTCGGTTGCTTCCAGGA 59.238 50.000 0.00 0.00 0.00 3.86
3574 3662 0.875059 GTTCTTCGGTTGCTTCCAGG 59.125 55.000 0.00 0.00 0.00 4.45
3575 3663 0.875059 GGTTCTTCGGTTGCTTCCAG 59.125 55.000 0.00 0.00 0.00 3.86
3576 3664 0.882927 CGGTTCTTCGGTTGCTTCCA 60.883 55.000 0.00 0.00 0.00 3.53
3577 3665 1.574702 CCGGTTCTTCGGTTGCTTCC 61.575 60.000 0.00 0.00 44.60 3.46
3578 3666 1.866925 CCGGTTCTTCGGTTGCTTC 59.133 57.895 0.00 0.00 44.60 3.86
3579 3667 4.058797 CCGGTTCTTCGGTTGCTT 57.941 55.556 0.00 0.00 44.60 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.