Multiple sequence alignment - TraesCS6B01G228500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G228500 chr6B 100.000 6750 0 0 1 6750 361578031 361584780 0.000000e+00 12466.0
1 TraesCS6B01G228500 chr6B 76.636 107 21 4 2548 2652 361580682 361580578 1.000000e-03 56.5
2 TraesCS6B01G228500 chr6A 96.864 3093 77 9 3340 6423 301091524 301088443 0.000000e+00 5156.0
3 TraesCS6B01G228500 chr6A 96.976 2381 49 7 544 2902 301093916 301091537 0.000000e+00 3976.0
4 TraesCS6B01G228500 chr6A 87.339 466 38 7 96 544 301095593 301095132 1.300000e-141 514.0
5 TraesCS6B01G228500 chr6A 88.889 45 3 2 2531 2575 301091777 301091819 3.000000e-03 54.7
6 TraesCS6B01G228500 chr6A 100.000 28 0 0 2625 2652 301091868 301091895 1.200000e-02 52.8
7 TraesCS6B01G228500 chr6D 95.276 2752 78 12 1 2711 191647511 191650251 0.000000e+00 4314.0
8 TraesCS6B01G228500 chr6D 97.339 1954 40 8 4552 6505 191651497 191653438 0.000000e+00 3310.0
9 TraesCS6B01G228500 chr6D 97.517 1168 18 4 3397 4554 191650250 191651416 0.000000e+00 1986.0
10 TraesCS6B01G228500 chr6D 93.868 212 9 4 6540 6750 191663800 191664008 3.930000e-82 316.0
11 TraesCS6B01G228500 chr6D 93.651 63 4 0 6688 6750 191670987 191671049 2.000000e-15 95.3
12 TraesCS6B01G228500 chr6D 100.000 41 0 0 6501 6541 191663744 191663784 7.260000e-10 76.8
13 TraesCS6B01G228500 chr6D 100.000 28 0 0 2625 2652 191650114 191650087 1.200000e-02 52.8
14 TraesCS6B01G228500 chr7D 92.784 388 21 5 2910 3295 408463321 408462939 7.650000e-154 555.0
15 TraesCS6B01G228500 chr7D 85.385 130 11 7 6307 6434 591451115 591450992 1.980000e-25 128.0
16 TraesCS6B01G228500 chr7D 90.323 62 6 0 191 252 40113552 40113491 1.560000e-11 82.4
17 TraesCS6B01G228500 chr7A 91.241 411 27 8 2892 3299 247210870 247210466 9.890000e-153 551.0
18 TraesCS6B01G228500 chr7A 91.457 398 29 4 2894 3290 129520918 129521311 5.950000e-150 542.0
19 TraesCS6B01G228500 chr7A 88.288 111 9 3 6319 6429 452650602 452650496 5.490000e-26 130.0
20 TraesCS6B01G228500 chr5A 91.940 397 27 4 2895 3290 428142288 428142680 9.890000e-153 551.0
21 TraesCS6B01G228500 chr5A 91.899 395 27 4 2899 3292 63261037 63260647 1.280000e-151 547.0
22 TraesCS6B01G228500 chr5A 91.878 394 27 4 2897 3289 637772139 637772528 4.600000e-151 545.0
23 TraesCS6B01G228500 chr5A 100.000 28 0 0 6168 6195 141071946 141071919 1.200000e-02 52.8
24 TraesCS6B01G228500 chr1A 91.521 401 28 5 2897 3295 539269276 539268880 1.280000e-151 547.0
25 TraesCS6B01G228500 chr1A 91.521 401 27 6 2897 3295 358829301 358828906 4.600000e-151 545.0
26 TraesCS6B01G228500 chr3A 91.089 404 31 4 2894 3295 387303146 387303546 5.950000e-150 542.0
27 TraesCS6B01G228500 chr4D 88.710 124 11 3 6307 6428 105123837 105123959 1.520000e-31 148.0
28 TraesCS6B01G228500 chr4A 89.189 111 10 2 6319 6427 470693668 470693558 3.280000e-28 137.0
29 TraesCS6B01G228500 chr4B 86.614 127 11 5 6307 6429 235376191 235376067 1.180000e-27 135.0
30 TraesCS6B01G228500 chr2B 85.827 127 12 5 6307 6428 148243867 148243742 5.490000e-26 130.0
31 TraesCS6B01G228500 chr2B 95.238 42 1 1 1391 1431 353566026 353566067 1.570000e-06 65.8
32 TraesCS6B01G228500 chr1B 85.714 126 14 4 6307 6429 13447302 13447426 5.490000e-26 130.0
33 TraesCS6B01G228500 chr2D 97.368 38 1 0 1394 1431 181307857 181307820 1.570000e-06 65.8
34 TraesCS6B01G228500 chr5B 96.970 33 1 0 1399 1431 694172404 694172436 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G228500 chr6B 361578031 361584780 6749 False 12466.000000 12466 100.000000 1 6750 1 chr6B.!!$F1 6749
1 TraesCS6B01G228500 chr6A 301088443 301095593 7150 True 3215.333333 5156 93.726333 96 6423 3 chr6A.!!$R1 6327
2 TraesCS6B01G228500 chr6D 191647511 191653438 5927 False 3203.333333 4314 96.710667 1 6505 3 chr6D.!!$F2 6504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
107 108 1.071699 GGGATGTGCTCGGCCTTTATA 59.928 52.381 0.00 0.0 0.00 0.98 F
1671 2922 0.688087 TTGTTCCAAACGGGGCCTTT 60.688 50.000 0.84 0.0 37.22 3.11 F
2918 4176 0.318445 ATACACGGGTCGCGCTATTC 60.318 55.000 9.49 0.0 0.00 1.75 F
4303 5579 0.109597 GCACTGCTCATTTTGGACCG 60.110 55.000 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1913 3164 0.251916 TTATTCAGGGTGTCAGGCCG 59.748 55.000 0.00 0.0 0.00 6.13 R
3291 4549 0.868177 CGCGTGTGTGTGTGTGTAGA 60.868 55.000 0.00 0.0 0.00 2.59 R
4324 5600 0.890683 CCACAACCAAGAATCTGGCC 59.109 55.000 0.00 0.0 40.45 5.36 R
5794 7153 2.101415 ACCTTTTCTGCCAAAAGAGTGC 59.899 45.455 16.07 0.0 39.04 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 4.389992 CAGACATCACAACACACACTATCC 59.610 45.833 0.00 0.00 0.00 2.59
82 83 3.139029 CCGACTAGAGTTGGGCAAC 57.861 57.895 7.97 0.00 44.24 4.17
90 91 4.589675 GTTGGGCAACGTGGGGGA 62.590 66.667 0.00 0.00 37.60 4.81
107 108 1.071699 GGGATGTGCTCGGCCTTTATA 59.928 52.381 0.00 0.00 0.00 0.98
113 114 1.282447 TGCTCGGCCTTTATAAACCCA 59.718 47.619 0.00 0.00 0.00 4.51
131 132 1.619654 CAGGCATTGGGTTGTTCTCA 58.380 50.000 0.00 0.00 0.00 3.27
159 160 4.088823 AGACCGTGTCGTTTGTAGATAC 57.911 45.455 0.00 0.00 37.67 2.24
165 166 5.388061 CCGTGTCGTTTGTAGATACACAAAG 60.388 44.000 1.86 0.00 46.20 2.77
353 371 5.335897 GCTTATGTTCTTGGTTGCAGATTCA 60.336 40.000 0.00 0.00 0.00 2.57
360 378 7.814107 TGTTCTTGGTTGCAGATTCAATTATTC 59.186 33.333 0.00 0.00 0.00 1.75
497 515 6.878923 TCACCCACAACTTATCTATGTTGAAG 59.121 38.462 17.78 11.54 44.29 3.02
530 548 7.096477 GCAGTGAACATACATTGAACTTGTTTC 60.096 37.037 0.00 0.00 31.09 2.78
667 1902 1.449782 CCATATACGGCCCACTGCA 59.550 57.895 0.00 0.00 43.89 4.41
899 2134 2.490991 GTTAGTCCACCGCTGAGTTTT 58.509 47.619 0.00 0.00 0.00 2.43
934 2170 2.076207 TCCCGTCAGATTCCCGAATA 57.924 50.000 0.00 0.00 0.00 1.75
1099 2335 1.902508 TCTGTTGGCACTTAGCTAGCT 59.097 47.619 23.12 23.12 44.79 3.32
1256 2492 4.019591 ACGCAGGGATAGGAAAAACTTACT 60.020 41.667 0.00 0.00 0.00 2.24
1257 2493 4.332819 CGCAGGGATAGGAAAAACTTACTG 59.667 45.833 0.00 0.00 0.00 2.74
1302 2538 4.398319 ACAGGAACTAAAACCACAGGATG 58.602 43.478 0.00 0.00 39.30 3.51
1331 2567 4.462483 ACAACTGTTGTTTGGATGTCAAGT 59.538 37.500 19.85 0.00 42.22 3.16
1402 2638 6.262496 CGAAATTCTAAAATTCTACCCCCTCC 59.738 42.308 0.00 0.00 33.93 4.30
1403 2639 6.668133 AATTCTAAAATTCTACCCCCTCCA 57.332 37.500 0.00 0.00 28.70 3.86
1445 2696 5.173774 CAAACGGAGATACATCCATTTGG 57.826 43.478 6.44 0.00 44.75 3.28
1483 2734 2.158295 ACGGAGGGAGTATGGAATAGCT 60.158 50.000 0.00 0.00 0.00 3.32
1511 2762 5.493809 CCAAAAAGAAACGTAGGGATAGGA 58.506 41.667 0.00 0.00 0.00 2.94
1616 2867 6.993786 AAAACAAAATGAACATTTCCCGTT 57.006 29.167 12.20 12.37 39.88 4.44
1636 2887 6.127479 CCCGTTGGAATCATATCCTTCAAAAA 60.127 38.462 0.00 0.00 40.35 1.94
1671 2922 0.688087 TTGTTCCAAACGGGGCCTTT 60.688 50.000 0.84 0.00 37.22 3.11
1681 2932 1.542472 ACGGGGCCTTTGAAATTTACG 59.458 47.619 0.84 0.00 0.00 3.18
1813 3064 2.371259 GGGGAGAGGGGCTCTGAAC 61.371 68.421 0.00 0.00 41.35 3.18
1855 3106 3.812053 CACTCCTTTTCAGGTCTGTCAAG 59.188 47.826 0.00 2.39 41.69 3.02
1886 3137 0.914644 CTCAAGGAAGGCTGATGGGA 59.085 55.000 0.00 0.00 0.00 4.37
2200 3452 5.476945 GGTGAATGTGAAGGTTGAGGTAATT 59.523 40.000 0.00 0.00 0.00 1.40
2231 3483 4.527038 TGTTGTTTTCTAACCCACCAACAA 59.473 37.500 0.00 0.00 32.98 2.83
2716 3971 9.561069 AATAGTGATTTGTATGAGGTATGTTCC 57.439 33.333 0.00 0.00 0.00 3.62
2910 4168 7.977904 TGTTACTCATATATATACACGGGTCG 58.022 38.462 0.00 0.00 0.00 4.79
2911 4169 5.496133 ACTCATATATATACACGGGTCGC 57.504 43.478 0.00 0.00 0.00 5.19
2912 4170 4.034858 ACTCATATATATACACGGGTCGCG 59.965 45.833 7.88 7.88 0.00 5.87
2913 4171 2.830772 TATATATACACGGGTCGCGC 57.169 50.000 9.49 0.00 0.00 6.86
2914 4172 1.171308 ATATATACACGGGTCGCGCT 58.829 50.000 9.49 0.00 0.00 5.92
2915 4173 1.807139 TATATACACGGGTCGCGCTA 58.193 50.000 9.49 0.00 0.00 4.26
2916 4174 1.171308 ATATACACGGGTCGCGCTAT 58.829 50.000 9.49 7.18 0.00 2.97
2917 4175 0.953727 TATACACGGGTCGCGCTATT 59.046 50.000 9.49 0.00 0.00 1.73
2918 4176 0.318445 ATACACGGGTCGCGCTATTC 60.318 55.000 9.49 0.00 0.00 1.75
2919 4177 2.651367 TACACGGGTCGCGCTATTCG 62.651 60.000 9.49 7.19 42.12 3.34
2920 4178 3.818787 ACGGGTCGCGCTATTCGT 61.819 61.111 9.49 7.88 41.07 3.85
2921 4179 3.022914 CGGGTCGCGCTATTCGTC 61.023 66.667 5.56 0.00 41.07 4.20
2922 4180 2.103538 GGGTCGCGCTATTCGTCA 59.896 61.111 5.56 0.00 41.07 4.35
2923 4181 2.228914 GGGTCGCGCTATTCGTCAC 61.229 63.158 5.56 0.00 41.07 3.67
2924 4182 2.228914 GGTCGCGCTATTCGTCACC 61.229 63.158 5.56 0.00 41.07 4.02
2925 4183 2.103538 TCGCGCTATTCGTCACCC 59.896 61.111 5.56 0.00 41.07 4.61
2926 4184 2.104331 CGCGCTATTCGTCACCCT 59.896 61.111 5.56 0.00 41.07 4.34
2927 4185 2.230940 CGCGCTATTCGTCACCCTG 61.231 63.158 5.56 0.00 41.07 4.45
2928 4186 1.883084 GCGCTATTCGTCACCCTGG 60.883 63.158 0.00 0.00 41.07 4.45
2929 4187 1.227263 CGCTATTCGTCACCCTGGG 60.227 63.158 12.28 12.28 0.00 4.45
2930 4188 1.905512 GCTATTCGTCACCCTGGGT 59.094 57.895 14.05 14.05 35.62 4.51
2941 4199 2.361085 ACCCTGGGTGAGGAATAGTT 57.639 50.000 19.82 0.00 46.33 2.24
2942 4200 3.502051 ACCCTGGGTGAGGAATAGTTA 57.498 47.619 19.82 0.00 46.33 2.24
2943 4201 4.022359 ACCCTGGGTGAGGAATAGTTAT 57.978 45.455 19.82 0.00 46.33 1.89
2944 4202 4.380791 ACCCTGGGTGAGGAATAGTTATT 58.619 43.478 19.82 0.00 46.33 1.40
2945 4203 4.412528 ACCCTGGGTGAGGAATAGTTATTC 59.587 45.833 19.82 3.75 46.33 1.75
2946 4204 4.660771 CCCTGGGTGAGGAATAGTTATTCT 59.339 45.833 3.97 0.00 46.33 2.40
2947 4205 5.132816 CCCTGGGTGAGGAATAGTTATTCTT 59.867 44.000 3.97 4.41 46.33 2.52
2948 4206 6.292150 CCTGGGTGAGGAATAGTTATTCTTC 58.708 44.000 13.90 13.90 46.33 2.87
2953 4211 6.248569 TGAGGAATAGTTATTCTTCACCCC 57.751 41.667 17.60 0.81 46.85 4.95
2954 4212 5.132144 TGAGGAATAGTTATTCTTCACCCCC 59.868 44.000 17.60 0.23 46.85 5.40
2955 4213 5.297799 AGGAATAGTTATTCTTCACCCCCT 58.702 41.667 10.71 0.00 41.33 4.79
2956 4214 5.369993 AGGAATAGTTATTCTTCACCCCCTC 59.630 44.000 10.71 0.00 41.33 4.30
2957 4215 5.369993 GGAATAGTTATTCTTCACCCCCTCT 59.630 44.000 10.71 0.00 41.33 3.69
2958 4216 6.464607 GGAATAGTTATTCTTCACCCCCTCTC 60.465 46.154 10.71 0.00 41.33 3.20
2959 4217 4.081695 AGTTATTCTTCACCCCCTCTCT 57.918 45.455 0.00 0.00 0.00 3.10
2960 4218 5.222278 AGTTATTCTTCACCCCCTCTCTA 57.778 43.478 0.00 0.00 0.00 2.43
2961 4219 5.793967 AGTTATTCTTCACCCCCTCTCTAT 58.206 41.667 0.00 0.00 0.00 1.98
2962 4220 6.213525 AGTTATTCTTCACCCCCTCTCTATT 58.786 40.000 0.00 0.00 0.00 1.73
2963 4221 6.678857 AGTTATTCTTCACCCCCTCTCTATTT 59.321 38.462 0.00 0.00 0.00 1.40
2964 4222 7.184753 AGTTATTCTTCACCCCCTCTCTATTTT 59.815 37.037 0.00 0.00 0.00 1.82
2965 4223 4.844349 TCTTCACCCCCTCTCTATTTTG 57.156 45.455 0.00 0.00 0.00 2.44
2966 4224 4.435137 TCTTCACCCCCTCTCTATTTTGA 58.565 43.478 0.00 0.00 0.00 2.69
2967 4225 4.225267 TCTTCACCCCCTCTCTATTTTGAC 59.775 45.833 0.00 0.00 0.00 3.18
2968 4226 2.500098 TCACCCCCTCTCTATTTTGACG 59.500 50.000 0.00 0.00 0.00 4.35
2969 4227 2.236395 CACCCCCTCTCTATTTTGACGT 59.764 50.000 0.00 0.00 0.00 4.34
2970 4228 2.500504 ACCCCCTCTCTATTTTGACGTC 59.499 50.000 9.11 9.11 0.00 4.34
2971 4229 2.500098 CCCCCTCTCTATTTTGACGTCA 59.500 50.000 15.76 15.76 0.00 4.35
2972 4230 3.055385 CCCCCTCTCTATTTTGACGTCAA 60.055 47.826 26.53 26.53 0.00 3.18
2973 4231 4.384208 CCCCCTCTCTATTTTGACGTCAAT 60.384 45.833 30.10 19.28 35.55 2.57
2974 4232 4.572389 CCCCTCTCTATTTTGACGTCAATG 59.428 45.833 30.10 19.55 35.55 2.82
2975 4233 4.034510 CCCTCTCTATTTTGACGTCAATGC 59.965 45.833 30.10 0.00 35.55 3.56
2976 4234 4.631377 CCTCTCTATTTTGACGTCAATGCA 59.369 41.667 30.10 17.89 35.55 3.96
2977 4235 5.446473 CCTCTCTATTTTGACGTCAATGCAC 60.446 44.000 30.10 0.00 35.55 4.57
2978 4236 4.391830 TCTCTATTTTGACGTCAATGCACC 59.608 41.667 30.10 0.00 35.55 5.01
2979 4237 2.330231 ATTTTGACGTCAATGCACCG 57.670 45.000 30.10 0.00 35.55 4.94
2980 4238 1.018148 TTTTGACGTCAATGCACCGT 58.982 45.000 30.10 0.00 35.55 4.83
2981 4239 1.867166 TTTGACGTCAATGCACCGTA 58.133 45.000 30.10 11.18 35.55 4.02
2982 4240 2.087501 TTGACGTCAATGCACCGTAT 57.912 45.000 26.53 0.00 34.51 3.06
2983 4241 2.087501 TGACGTCAATGCACCGTATT 57.912 45.000 17.62 0.00 34.51 1.89
2984 4242 2.418692 TGACGTCAATGCACCGTATTT 58.581 42.857 17.62 0.00 34.51 1.40
2985 4243 2.809119 TGACGTCAATGCACCGTATTTT 59.191 40.909 17.62 0.00 34.51 1.82
2986 4244 3.995048 TGACGTCAATGCACCGTATTTTA 59.005 39.130 17.62 0.00 34.51 1.52
2987 4245 4.092237 TGACGTCAATGCACCGTATTTTAG 59.908 41.667 17.62 0.00 34.51 1.85
2988 4246 4.247258 ACGTCAATGCACCGTATTTTAGA 58.753 39.130 0.00 0.00 32.22 2.10
2989 4247 4.873827 ACGTCAATGCACCGTATTTTAGAT 59.126 37.500 0.00 0.00 32.22 1.98
2990 4248 5.353123 ACGTCAATGCACCGTATTTTAGATT 59.647 36.000 0.00 0.00 32.22 2.40
2991 4249 6.128117 ACGTCAATGCACCGTATTTTAGATTT 60.128 34.615 0.00 0.00 32.22 2.17
2992 4250 6.410914 CGTCAATGCACCGTATTTTAGATTTC 59.589 38.462 0.00 0.00 0.00 2.17
2993 4251 6.410914 GTCAATGCACCGTATTTTAGATTTCG 59.589 38.462 0.00 0.00 0.00 3.46
2994 4252 6.092944 TCAATGCACCGTATTTTAGATTTCGT 59.907 34.615 0.00 0.00 0.00 3.85
2995 4253 7.278203 TCAATGCACCGTATTTTAGATTTCGTA 59.722 33.333 0.00 0.00 0.00 3.43
2996 4254 6.964741 TGCACCGTATTTTAGATTTCGTAA 57.035 33.333 0.00 0.00 0.00 3.18
2997 4255 7.361889 TGCACCGTATTTTAGATTTCGTAAA 57.638 32.000 0.00 0.00 0.00 2.01
2998 4256 7.976826 TGCACCGTATTTTAGATTTCGTAAAT 58.023 30.769 0.00 0.00 0.00 1.40
2999 4257 8.452534 TGCACCGTATTTTAGATTTCGTAAATT 58.547 29.630 0.00 0.00 0.00 1.82
3000 4258 9.281075 GCACCGTATTTTAGATTTCGTAAATTT 57.719 29.630 0.00 0.00 0.00 1.82
3048 4306 9.178427 AGACAACGTAAGAAAATATATACTCGC 57.822 33.333 0.00 0.00 43.62 5.03
3049 4307 8.290663 ACAACGTAAGAAAATATATACTCGCC 57.709 34.615 0.00 0.00 43.62 5.54
3050 4308 7.113965 ACAACGTAAGAAAATATATACTCGCCG 59.886 37.037 0.00 0.00 43.62 6.46
3051 4309 6.672147 ACGTAAGAAAATATATACTCGCCGT 58.328 36.000 0.00 0.00 43.62 5.68
3052 4310 7.806690 ACGTAAGAAAATATATACTCGCCGTA 58.193 34.615 0.00 0.00 43.62 4.02
3053 4311 8.289618 ACGTAAGAAAATATATACTCGCCGTAA 58.710 33.333 0.00 0.00 43.62 3.18
3054 4312 9.117145 CGTAAGAAAATATATACTCGCCGTAAA 57.883 33.333 0.00 0.00 43.02 2.01
3103 4361 7.740519 ACGAACGTAAAATATAGTGTACACC 57.259 36.000 22.28 4.91 0.00 4.16
3104 4362 7.312154 ACGAACGTAAAATATAGTGTACACCA 58.688 34.615 22.28 9.78 0.00 4.17
3105 4363 7.975616 ACGAACGTAAAATATAGTGTACACCAT 59.024 33.333 22.28 16.77 0.00 3.55
3106 4364 9.449550 CGAACGTAAAATATAGTGTACACCATA 57.550 33.333 22.28 18.43 0.00 2.74
3117 4375 6.358118 AGTGTACACCATACATAAAATGCG 57.642 37.500 22.28 0.00 0.00 4.73
3118 4376 6.110033 AGTGTACACCATACATAAAATGCGA 58.890 36.000 22.28 0.00 0.00 5.10
3119 4377 6.765989 AGTGTACACCATACATAAAATGCGAT 59.234 34.615 22.28 0.00 0.00 4.58
3120 4378 7.929245 AGTGTACACCATACATAAAATGCGATA 59.071 33.333 22.28 0.00 0.00 2.92
3121 4379 8.717821 GTGTACACCATACATAAAATGCGATAT 58.282 33.333 15.42 0.00 0.00 1.63
3122 4380 9.278978 TGTACACCATACATAAAATGCGATATT 57.721 29.630 0.00 0.00 0.00 1.28
3125 4383 9.066892 ACACCATACATAAAATGCGATATTTCT 57.933 29.630 0.00 0.00 0.00 2.52
3126 4384 9.333497 CACCATACATAAAATGCGATATTTCTG 57.667 33.333 0.00 0.00 0.00 3.02
3127 4385 8.514594 ACCATACATAAAATGCGATATTTCTGG 58.485 33.333 0.00 0.00 0.00 3.86
3128 4386 8.514594 CCATACATAAAATGCGATATTTCTGGT 58.485 33.333 0.00 0.00 0.00 4.00
3129 4387 9.546909 CATACATAAAATGCGATATTTCTGGTC 57.453 33.333 0.00 0.00 0.00 4.02
3130 4388 7.807977 ACATAAAATGCGATATTTCTGGTCT 57.192 32.000 0.00 0.00 0.00 3.85
3131 4389 8.225603 ACATAAAATGCGATATTTCTGGTCTT 57.774 30.769 0.00 0.00 0.00 3.01
3132 4390 9.337396 ACATAAAATGCGATATTTCTGGTCTTA 57.663 29.630 0.00 0.00 0.00 2.10
3254 4512 5.759059 TCGTAAGATTACCTAGGGTGAAGA 58.241 41.667 14.81 0.00 45.01 2.87
3255 4513 6.189859 TCGTAAGATTACCTAGGGTGAAGAA 58.810 40.000 14.81 0.00 45.01 2.52
3256 4514 6.837568 TCGTAAGATTACCTAGGGTGAAGAAT 59.162 38.462 14.81 2.63 45.01 2.40
3257 4515 8.000709 TCGTAAGATTACCTAGGGTGAAGAATA 58.999 37.037 14.81 0.00 45.01 1.75
3258 4516 8.636213 CGTAAGATTACCTAGGGTGAAGAATAA 58.364 37.037 14.81 0.00 36.23 1.40
3259 4517 9.761504 GTAAGATTACCTAGGGTGAAGAATAAC 57.238 37.037 14.81 0.00 36.19 1.89
3260 4518 8.625467 AAGATTACCTAGGGTGAAGAATAACT 57.375 34.615 14.81 0.00 36.19 2.24
3261 4519 8.625467 AGATTACCTAGGGTGAAGAATAACTT 57.375 34.615 14.81 0.00 38.14 2.66
3262 4520 9.725206 AGATTACCTAGGGTGAAGAATAACTTA 57.275 33.333 14.81 0.00 36.67 2.24
3266 4524 8.625467 ACCTAGGGTGAAGAATAACTTATTCT 57.375 34.615 14.81 15.62 44.74 2.40
3267 4525 8.487028 ACCTAGGGTGAAGAATAACTTATTCTG 58.513 37.037 20.22 9.99 43.39 3.02
3276 4534 6.566197 GAATAACTTATTCTGCATCCTGGG 57.434 41.667 12.55 0.00 41.00 4.45
3277 4535 5.653255 ATAACTTATTCTGCATCCTGGGT 57.347 39.130 0.00 0.00 0.00 4.51
3278 4536 3.287867 ACTTATTCTGCATCCTGGGTG 57.712 47.619 1.54 1.54 0.00 4.61
3279 4537 2.846206 ACTTATTCTGCATCCTGGGTGA 59.154 45.455 12.09 0.00 0.00 4.02
3280 4538 3.461085 ACTTATTCTGCATCCTGGGTGAT 59.539 43.478 12.09 0.00 0.00 3.06
3281 4539 2.359981 ATTCTGCATCCTGGGTGATG 57.640 50.000 12.09 2.06 44.02 3.07
3282 4540 1.288188 TTCTGCATCCTGGGTGATGA 58.712 50.000 12.09 4.66 43.94 2.92
3283 4541 1.288188 TCTGCATCCTGGGTGATGAA 58.712 50.000 12.09 0.00 43.94 2.57
3284 4542 1.848388 TCTGCATCCTGGGTGATGAAT 59.152 47.619 12.09 0.00 43.94 2.57
3285 4543 3.047857 TCTGCATCCTGGGTGATGAATA 58.952 45.455 12.09 0.00 43.94 1.75
3286 4544 3.072038 TCTGCATCCTGGGTGATGAATAG 59.928 47.826 12.09 0.00 43.94 1.73
3287 4545 2.779430 TGCATCCTGGGTGATGAATAGT 59.221 45.455 12.09 0.00 43.94 2.12
3288 4546 3.973305 TGCATCCTGGGTGATGAATAGTA 59.027 43.478 12.09 0.00 43.94 1.82
3289 4547 4.598807 TGCATCCTGGGTGATGAATAGTAT 59.401 41.667 12.09 0.00 43.94 2.12
3290 4548 5.073554 TGCATCCTGGGTGATGAATAGTATT 59.926 40.000 12.09 0.00 43.94 1.89
3291 4549 6.006449 GCATCCTGGGTGATGAATAGTATTT 58.994 40.000 12.09 0.00 43.94 1.40
3292 4550 6.150140 GCATCCTGGGTGATGAATAGTATTTC 59.850 42.308 12.09 0.00 43.94 2.17
3293 4551 7.456725 CATCCTGGGTGATGAATAGTATTTCT 58.543 38.462 0.00 0.00 43.94 2.52
3294 4552 8.597167 CATCCTGGGTGATGAATAGTATTTCTA 58.403 37.037 0.00 0.00 43.94 2.10
3295 4553 7.963532 TCCTGGGTGATGAATAGTATTTCTAC 58.036 38.462 0.00 0.00 0.00 2.59
3296 4554 7.567250 TCCTGGGTGATGAATAGTATTTCTACA 59.433 37.037 0.00 0.00 0.00 2.74
3297 4555 7.657761 CCTGGGTGATGAATAGTATTTCTACAC 59.342 40.741 0.00 6.03 34.72 2.90
3298 4556 8.084985 TGGGTGATGAATAGTATTTCTACACA 57.915 34.615 16.92 10.80 35.85 3.72
3299 4557 7.985184 TGGGTGATGAATAGTATTTCTACACAC 59.015 37.037 16.92 15.31 36.87 3.82
3300 4558 7.985184 GGGTGATGAATAGTATTTCTACACACA 59.015 37.037 16.92 3.76 36.63 3.72
3301 4559 8.818057 GGTGATGAATAGTATTTCTACACACAC 58.182 37.037 16.92 13.46 35.85 3.82
3302 4560 9.366216 GTGATGAATAGTATTTCTACACACACA 57.634 33.333 0.00 0.00 35.11 3.72
3303 4561 9.366216 TGATGAATAGTATTTCTACACACACAC 57.634 33.333 0.00 0.00 0.00 3.82
3304 4562 9.366216 GATGAATAGTATTTCTACACACACACA 57.634 33.333 0.00 0.00 0.00 3.72
3305 4563 8.528917 TGAATAGTATTTCTACACACACACAC 57.471 34.615 0.00 0.00 0.00 3.82
3306 4564 8.145122 TGAATAGTATTTCTACACACACACACA 58.855 33.333 0.00 0.00 0.00 3.72
3307 4565 7.884816 ATAGTATTTCTACACACACACACAC 57.115 36.000 0.00 0.00 0.00 3.82
3308 4566 4.743151 AGTATTTCTACACACACACACACG 59.257 41.667 0.00 0.00 0.00 4.49
3309 4567 1.282817 TTCTACACACACACACACGC 58.717 50.000 0.00 0.00 0.00 5.34
3310 4568 0.868177 TCTACACACACACACACGCG 60.868 55.000 3.53 3.53 0.00 6.01
3311 4569 2.410935 CTACACACACACACACGCGC 62.411 60.000 5.73 0.00 0.00 6.86
3312 4570 4.918060 CACACACACACACGCGCG 62.918 66.667 30.96 30.96 0.00 6.86
3332 4590 3.858989 CGCGCACACACACACACA 61.859 61.111 8.75 0.00 0.00 3.72
3333 4591 2.277247 GCGCACACACACACACAC 60.277 61.111 0.30 0.00 0.00 3.82
3334 4592 3.033166 GCGCACACACACACACACA 62.033 57.895 0.30 0.00 0.00 3.72
3335 4593 1.720894 CGCACACACACACACACAT 59.279 52.632 0.00 0.00 0.00 3.21
3336 4594 0.933796 CGCACACACACACACACATA 59.066 50.000 0.00 0.00 0.00 2.29
3337 4595 1.328986 CGCACACACACACACACATAA 59.671 47.619 0.00 0.00 0.00 1.90
3338 4596 2.032117 CGCACACACACACACACATAAT 60.032 45.455 0.00 0.00 0.00 1.28
3392 4650 6.320418 TGTCATACGGTTCTATCTGTACACAT 59.680 38.462 0.00 0.00 32.91 3.21
3493 4751 6.717084 AGCCAAGCTAATCTTAGACTTGTTTT 59.283 34.615 20.26 10.86 39.93 2.43
3537 4795 3.584848 GACTAGCAGGGTATGGATTGGAT 59.415 47.826 0.00 0.00 0.00 3.41
3618 4876 4.652421 TGTTGTTCTGTCACATGCATTT 57.348 36.364 0.00 0.00 0.00 2.32
4004 5272 1.767681 TGGGCTGAAAAACTGGCAAAT 59.232 42.857 0.00 0.00 42.87 2.32
4205 5481 2.133553 CAAGCTGCGATCTATCACCTG 58.866 52.381 0.00 0.00 0.00 4.00
4235 5511 7.990886 AGTGGTGACTTGTTTATTCTTCAGTAA 59.009 33.333 0.00 0.00 0.00 2.24
4303 5579 0.109597 GCACTGCTCATTTTGGACCG 60.110 55.000 0.00 0.00 0.00 4.79
4324 5600 3.375299 CGTTTCTATTTGAAGGCCAGGAG 59.625 47.826 5.01 0.00 35.89 3.69
4419 5695 9.540538 TTCCCTATTAATTTGGTTCTGAAATCA 57.459 29.630 0.00 0.00 0.00 2.57
4484 5760 1.814394 CATCAGGCTGCTTTGTGCTTA 59.186 47.619 10.34 0.00 43.37 3.09
4631 5990 6.842437 TTTCTCTAGACTTGTGCTATCACT 57.158 37.500 0.00 0.00 43.49 3.41
4697 6056 2.359850 GTCAGACGGCATGCCCAA 60.360 61.111 30.79 9.03 0.00 4.12
5062 6421 6.455360 ACGAATGGTGCAATCAAAGAATAT 57.545 33.333 0.00 0.00 0.00 1.28
5223 6582 7.884877 TGATATTCTGAATGACACTGAAGGTTT 59.115 33.333 13.01 0.00 0.00 3.27
5594 6953 2.560542 TGTGCAAAGCCGGTTTTATCAT 59.439 40.909 16.44 0.00 0.00 2.45
5660 7019 4.996122 CCTCAGATCCATGTTCATTAGAGC 59.004 45.833 0.00 0.00 0.00 4.09
5830 7189 6.593978 CAGAAAAGGTGATGAACTAAACTCG 58.406 40.000 0.00 0.00 0.00 4.18
5864 7223 3.713288 TCGTCCTGTAAACTGACAGTTG 58.287 45.455 21.24 8.74 44.54 3.16
6044 7403 2.094390 TCGTCCCATAACAGTGTACAGC 60.094 50.000 0.00 0.00 0.00 4.40
6284 7643 4.206200 GCAATTCGGTTTTATATGTTGGCG 59.794 41.667 0.00 0.00 0.00 5.69
6304 7663 5.126222 TGGCGTTCTATAAAATGGATTTGCA 59.874 36.000 0.00 0.00 32.27 4.08
6318 7677 5.064558 TGGATTTGCACAATTTGATTTGCT 58.935 33.333 2.79 0.00 35.91 3.91
6425 7784 4.540715 CTCCCTAGAGCCAAAATGGATTT 58.459 43.478 0.00 0.00 35.51 2.17
6446 7805 1.331756 CCGTGCCAGTGATTCTTATGC 59.668 52.381 0.00 0.00 0.00 3.14
6473 7832 4.925054 CCTGCACATTAAGACAAAACATGG 59.075 41.667 0.00 0.00 0.00 3.66
6474 7833 5.278907 CCTGCACATTAAGACAAAACATGGA 60.279 40.000 0.00 0.00 0.00 3.41
6475 7834 5.771469 TGCACATTAAGACAAAACATGGAG 58.229 37.500 0.00 0.00 0.00 3.86
6476 7835 5.534278 TGCACATTAAGACAAAACATGGAGA 59.466 36.000 0.00 0.00 0.00 3.71
6505 7864 0.255890 TAAACCTGGGGAGCAGCATC 59.744 55.000 0.00 0.00 0.00 3.91
6506 7865 1.504275 AAACCTGGGGAGCAGCATCT 61.504 55.000 0.00 0.00 0.00 2.90
6507 7866 0.621571 AACCTGGGGAGCAGCATCTA 60.622 55.000 0.00 0.00 0.00 1.98
6508 7867 0.621571 ACCTGGGGAGCAGCATCTAA 60.622 55.000 0.00 0.00 0.00 2.10
6509 7868 0.548031 CCTGGGGAGCAGCATCTAAA 59.452 55.000 0.00 0.00 0.00 1.85
6510 7869 1.673168 CTGGGGAGCAGCATCTAAAC 58.327 55.000 0.00 0.00 0.00 2.01
6511 7870 0.991146 TGGGGAGCAGCATCTAAACA 59.009 50.000 0.00 0.00 0.00 2.83
6512 7871 1.565759 TGGGGAGCAGCATCTAAACAT 59.434 47.619 0.00 0.00 0.00 2.71
6513 7872 2.025037 TGGGGAGCAGCATCTAAACATT 60.025 45.455 0.00 0.00 0.00 2.71
6514 7873 3.026694 GGGGAGCAGCATCTAAACATTT 58.973 45.455 0.00 0.00 0.00 2.32
6515 7874 3.067320 GGGGAGCAGCATCTAAACATTTC 59.933 47.826 0.00 0.00 0.00 2.17
6516 7875 3.242870 GGGAGCAGCATCTAAACATTTCG 60.243 47.826 0.00 0.00 0.00 3.46
6517 7876 3.375299 GGAGCAGCATCTAAACATTTCGT 59.625 43.478 0.00 0.00 0.00 3.85
6518 7877 4.337763 GAGCAGCATCTAAACATTTCGTG 58.662 43.478 0.00 0.00 0.00 4.35
6519 7878 3.127548 AGCAGCATCTAAACATTTCGTGG 59.872 43.478 0.00 0.00 0.00 4.94
6520 7879 3.119849 GCAGCATCTAAACATTTCGTGGT 60.120 43.478 0.00 0.00 0.00 4.16
6521 7880 4.615912 GCAGCATCTAAACATTTCGTGGTT 60.616 41.667 0.00 0.00 41.61 3.67
6522 7881 4.853196 CAGCATCTAAACATTTCGTGGTTG 59.147 41.667 0.00 0.00 38.47 3.77
6523 7882 4.518970 AGCATCTAAACATTTCGTGGTTGT 59.481 37.500 0.00 0.00 38.47 3.32
6524 7883 5.009610 AGCATCTAAACATTTCGTGGTTGTT 59.990 36.000 0.00 0.00 38.47 2.83
6525 7884 5.689961 GCATCTAAACATTTCGTGGTTGTTT 59.310 36.000 5.69 5.69 43.74 2.83
6526 7885 6.345723 GCATCTAAACATTTCGTGGTTGTTTG 60.346 38.462 9.77 2.28 42.02 2.93
6527 7886 6.438259 TCTAAACATTTCGTGGTTGTTTGA 57.562 33.333 9.77 4.12 42.02 2.69
6528 7887 6.853720 TCTAAACATTTCGTGGTTGTTTGAA 58.146 32.000 9.77 0.00 42.02 2.69
6529 7888 7.484975 TCTAAACATTTCGTGGTTGTTTGAAT 58.515 30.769 9.77 0.00 42.02 2.57
6530 7889 8.622157 TCTAAACATTTCGTGGTTGTTTGAATA 58.378 29.630 9.77 0.00 42.02 1.75
6531 7890 7.692908 AAACATTTCGTGGTTGTTTGAATAG 57.307 32.000 0.00 0.00 40.88 1.73
6532 7891 5.219633 ACATTTCGTGGTTGTTTGAATAGC 58.780 37.500 0.00 0.00 0.00 2.97
6533 7892 3.529634 TTCGTGGTTGTTTGAATAGCG 57.470 42.857 0.00 0.00 0.00 4.26
6534 7893 2.756829 TCGTGGTTGTTTGAATAGCGA 58.243 42.857 0.00 0.00 0.00 4.93
6535 7894 3.331150 TCGTGGTTGTTTGAATAGCGAT 58.669 40.909 0.00 0.00 0.00 4.58
6536 7895 3.124466 TCGTGGTTGTTTGAATAGCGATG 59.876 43.478 0.00 0.00 0.00 3.84
6537 7896 3.124466 CGTGGTTGTTTGAATAGCGATGA 59.876 43.478 0.00 0.00 0.00 2.92
6538 7897 4.201812 CGTGGTTGTTTGAATAGCGATGAT 60.202 41.667 0.00 0.00 0.00 2.45
6539 7898 5.006261 CGTGGTTGTTTGAATAGCGATGATA 59.994 40.000 0.00 0.00 0.00 2.15
6540 7899 6.456315 CGTGGTTGTTTGAATAGCGATGATAA 60.456 38.462 0.00 0.00 0.00 1.75
6541 7900 7.247728 GTGGTTGTTTGAATAGCGATGATAAA 58.752 34.615 0.00 0.00 0.00 1.40
6542 7901 7.753132 GTGGTTGTTTGAATAGCGATGATAAAA 59.247 33.333 0.00 0.00 0.00 1.52
6543 7902 7.753132 TGGTTGTTTGAATAGCGATGATAAAAC 59.247 33.333 0.00 0.00 0.00 2.43
6544 7903 7.753132 GGTTGTTTGAATAGCGATGATAAAACA 59.247 33.333 0.58 0.58 35.22 2.83
6545 7904 9.123709 GTTGTTTGAATAGCGATGATAAAACAA 57.876 29.630 10.23 10.23 41.42 2.83
6546 7905 8.894409 TGTTTGAATAGCGATGATAAAACAAG 57.106 30.769 1.92 0.00 34.39 3.16
6547 7906 8.511321 TGTTTGAATAGCGATGATAAAACAAGT 58.489 29.630 1.92 0.00 34.39 3.16
6548 7907 9.341899 GTTTGAATAGCGATGATAAAACAAGTT 57.658 29.630 0.00 0.00 0.00 2.66
6549 7908 8.894409 TTGAATAGCGATGATAAAACAAGTTG 57.106 30.769 0.00 0.00 0.00 3.16
6550 7909 8.039603 TGAATAGCGATGATAAAACAAGTTGT 57.960 30.769 1.64 1.64 0.00 3.32
6551 7910 9.157104 TGAATAGCGATGATAAAACAAGTTGTA 57.843 29.630 9.37 0.00 0.00 2.41
6552 7911 9.422196 GAATAGCGATGATAAAACAAGTTGTAC 57.578 33.333 9.37 0.20 0.00 2.90
6553 7912 8.718102 ATAGCGATGATAAAACAAGTTGTACT 57.282 30.769 9.37 1.95 0.00 2.73
6554 7913 9.811995 ATAGCGATGATAAAACAAGTTGTACTA 57.188 29.630 9.37 4.27 0.00 1.82
6555 7914 8.186178 AGCGATGATAAAACAAGTTGTACTAG 57.814 34.615 9.37 0.00 0.00 2.57
6556 7915 7.277981 AGCGATGATAAAACAAGTTGTACTAGG 59.722 37.037 9.37 0.00 0.00 3.02
6557 7916 7.277098 GCGATGATAAAACAAGTTGTACTAGGA 59.723 37.037 9.37 0.00 0.00 2.94
6558 7917 9.314321 CGATGATAAAACAAGTTGTACTAGGAT 57.686 33.333 9.37 0.00 0.00 3.24
6610 7969 9.887406 TTTTCTGTTAAGAATAAGCTTTTACGG 57.113 29.630 3.20 0.00 42.04 4.02
6611 7970 8.836268 TTCTGTTAAGAATAAGCTTTTACGGA 57.164 30.769 3.20 0.00 37.51 4.69
6612 7971 8.836268 TCTGTTAAGAATAAGCTTTTACGGAA 57.164 30.769 3.20 0.00 30.45 4.30
6613 7972 9.275398 TCTGTTAAGAATAAGCTTTTACGGAAA 57.725 29.630 3.20 0.00 30.45 3.13
6614 7973 9.887406 CTGTTAAGAATAAGCTTTTACGGAAAA 57.113 29.630 3.20 5.24 33.48 2.29
6619 7978 8.797266 AGAATAAGCTTTTACGGAAAAACAAG 57.203 30.769 3.20 0.00 34.16 3.16
6620 7979 8.410912 AGAATAAGCTTTTACGGAAAAACAAGT 58.589 29.630 3.20 0.00 34.16 3.16
6621 7980 8.936070 AATAAGCTTTTACGGAAAAACAAGTT 57.064 26.923 3.20 0.00 34.16 2.66
6622 7981 8.936070 ATAAGCTTTTACGGAAAAACAAGTTT 57.064 26.923 3.20 2.22 34.16 2.66
6623 7982 6.641176 AGCTTTTACGGAAAAACAAGTTTG 57.359 33.333 7.04 0.00 34.16 2.93
6624 7983 5.579119 AGCTTTTACGGAAAAACAAGTTTGG 59.421 36.000 7.04 0.00 34.16 3.28
6625 7984 5.220510 GCTTTTACGGAAAAACAAGTTTGGG 60.221 40.000 7.04 0.00 34.16 4.12
6626 7985 2.971660 ACGGAAAAACAAGTTTGGGG 57.028 45.000 0.00 0.00 32.36 4.96
6627 7986 2.181125 ACGGAAAAACAAGTTTGGGGT 58.819 42.857 0.00 0.00 32.36 4.95
6628 7987 3.363627 ACGGAAAAACAAGTTTGGGGTA 58.636 40.909 0.00 0.00 32.36 3.69
6629 7988 3.382227 ACGGAAAAACAAGTTTGGGGTAG 59.618 43.478 0.00 0.00 32.36 3.18
6630 7989 3.243602 CGGAAAAACAAGTTTGGGGTAGG 60.244 47.826 0.00 0.00 32.36 3.18
6631 7990 3.962063 GGAAAAACAAGTTTGGGGTAGGA 59.038 43.478 0.00 0.00 32.36 2.94
6632 7991 4.038763 GGAAAAACAAGTTTGGGGTAGGAG 59.961 45.833 0.00 0.00 32.36 3.69
6633 7992 4.529716 AAAACAAGTTTGGGGTAGGAGA 57.470 40.909 0.00 0.00 32.36 3.71
6634 7993 3.790089 AACAAGTTTGGGGTAGGAGAG 57.210 47.619 0.00 0.00 0.00 3.20
6635 7994 2.702748 ACAAGTTTGGGGTAGGAGAGT 58.297 47.619 0.00 0.00 0.00 3.24
6636 7995 2.638363 ACAAGTTTGGGGTAGGAGAGTC 59.362 50.000 0.00 0.00 0.00 3.36
6637 7996 2.907042 CAAGTTTGGGGTAGGAGAGTCT 59.093 50.000 0.00 0.00 0.00 3.24
6638 7997 4.094476 CAAGTTTGGGGTAGGAGAGTCTA 58.906 47.826 0.00 0.00 0.00 2.59
6639 7998 4.415224 AGTTTGGGGTAGGAGAGTCTAA 57.585 45.455 0.00 0.00 0.00 2.10
6640 7999 4.354662 AGTTTGGGGTAGGAGAGTCTAAG 58.645 47.826 0.00 0.00 0.00 2.18
6641 8000 4.045590 AGTTTGGGGTAGGAGAGTCTAAGA 59.954 45.833 0.00 0.00 0.00 2.10
6642 8001 3.666345 TGGGGTAGGAGAGTCTAAGAC 57.334 52.381 0.00 0.00 0.00 3.01
6643 8002 3.199671 TGGGGTAGGAGAGTCTAAGACT 58.800 50.000 0.00 0.00 46.42 3.24
6656 8015 6.827586 AGTCTAAGACTCTTTGTACTCCTG 57.172 41.667 0.00 0.00 38.71 3.86
6657 8016 5.712917 AGTCTAAGACTCTTTGTACTCCTGG 59.287 44.000 0.00 0.00 38.71 4.45
6658 8017 5.477637 GTCTAAGACTCTTTGTACTCCTGGT 59.522 44.000 0.00 0.00 0.00 4.00
6659 8018 6.015265 GTCTAAGACTCTTTGTACTCCTGGTT 60.015 42.308 0.00 0.00 0.00 3.67
6660 8019 5.632034 AAGACTCTTTGTACTCCTGGTTT 57.368 39.130 0.00 0.00 0.00 3.27
6661 8020 4.962155 AGACTCTTTGTACTCCTGGTTTG 58.038 43.478 0.00 0.00 0.00 2.93
6662 8021 3.477530 ACTCTTTGTACTCCTGGTTTGC 58.522 45.455 0.00 0.00 0.00 3.68
6663 8022 3.118038 ACTCTTTGTACTCCTGGTTTGCA 60.118 43.478 0.00 0.00 0.00 4.08
6664 8023 3.211045 TCTTTGTACTCCTGGTTTGCAC 58.789 45.455 0.00 0.00 0.00 4.57
6665 8024 3.118038 TCTTTGTACTCCTGGTTTGCACT 60.118 43.478 0.00 0.00 0.00 4.40
6666 8025 3.290948 TTGTACTCCTGGTTTGCACTT 57.709 42.857 0.00 0.00 0.00 3.16
6667 8026 2.846193 TGTACTCCTGGTTTGCACTTC 58.154 47.619 0.00 0.00 0.00 3.01
6668 8027 2.171659 TGTACTCCTGGTTTGCACTTCA 59.828 45.455 0.00 0.00 0.00 3.02
6669 8028 2.664402 ACTCCTGGTTTGCACTTCAT 57.336 45.000 0.00 0.00 0.00 2.57
6670 8029 2.508526 ACTCCTGGTTTGCACTTCATC 58.491 47.619 0.00 0.00 0.00 2.92
6671 8030 2.107204 ACTCCTGGTTTGCACTTCATCT 59.893 45.455 0.00 0.00 0.00 2.90
6672 8031 3.152341 CTCCTGGTTTGCACTTCATCTT 58.848 45.455 0.00 0.00 0.00 2.40
6673 8032 3.565307 TCCTGGTTTGCACTTCATCTTT 58.435 40.909 0.00 0.00 0.00 2.52
6674 8033 3.569701 TCCTGGTTTGCACTTCATCTTTC 59.430 43.478 0.00 0.00 0.00 2.62
6675 8034 3.571401 CCTGGTTTGCACTTCATCTTTCT 59.429 43.478 0.00 0.00 0.00 2.52
6676 8035 4.038402 CCTGGTTTGCACTTCATCTTTCTT 59.962 41.667 0.00 0.00 0.00 2.52
6677 8036 5.241506 CCTGGTTTGCACTTCATCTTTCTTA 59.758 40.000 0.00 0.00 0.00 2.10
6678 8037 6.239008 CCTGGTTTGCACTTCATCTTTCTTAA 60.239 38.462 0.00 0.00 0.00 1.85
6679 8038 6.503524 TGGTTTGCACTTCATCTTTCTTAAC 58.496 36.000 0.00 0.00 0.00 2.01
6680 8039 5.625311 GGTTTGCACTTCATCTTTCTTAACG 59.375 40.000 0.00 0.00 0.00 3.18
6681 8040 5.356882 TTGCACTTCATCTTTCTTAACGG 57.643 39.130 0.00 0.00 0.00 4.44
6682 8041 3.751175 TGCACTTCATCTTTCTTAACGGG 59.249 43.478 0.00 0.00 0.00 5.28
6683 8042 4.000988 GCACTTCATCTTTCTTAACGGGA 58.999 43.478 0.00 0.00 0.00 5.14
6684 8043 4.454504 GCACTTCATCTTTCTTAACGGGAA 59.545 41.667 0.00 0.00 0.00 3.97
6685 8044 5.617087 GCACTTCATCTTTCTTAACGGGAAC 60.617 44.000 0.00 0.00 0.00 3.62
6686 8045 5.468746 CACTTCATCTTTCTTAACGGGAACA 59.531 40.000 0.00 0.00 0.00 3.18
6687 8046 5.701290 ACTTCATCTTTCTTAACGGGAACAG 59.299 40.000 0.00 0.00 0.00 3.16
6688 8047 5.477607 TCATCTTTCTTAACGGGAACAGA 57.522 39.130 0.00 0.00 0.00 3.41
6689 8048 5.860611 TCATCTTTCTTAACGGGAACAGAA 58.139 37.500 0.00 0.00 0.00 3.02
6690 8049 6.472887 TCATCTTTCTTAACGGGAACAGAAT 58.527 36.000 0.00 0.00 0.00 2.40
6691 8050 6.371548 TCATCTTTCTTAACGGGAACAGAATG 59.628 38.462 0.00 0.00 46.00 2.67
6705 8064 1.398390 CAGAATGTTAGCGACAAGGGC 59.602 52.381 0.10 0.00 42.62 5.19
6706 8065 0.373716 GAATGTTAGCGACAAGGGCG 59.626 55.000 0.10 0.00 42.62 6.13
6707 8066 0.036765 AATGTTAGCGACAAGGGCGA 60.037 50.000 0.00 0.00 42.62 5.54
6708 8067 0.460284 ATGTTAGCGACAAGGGCGAG 60.460 55.000 0.00 0.00 42.62 5.03
6709 8068 2.125673 TTAGCGACAAGGGCGAGC 60.126 61.111 0.00 0.00 35.00 5.03
6710 8069 3.982372 TTAGCGACAAGGGCGAGCG 62.982 63.158 0.00 0.00 35.00 5.03
6721 8080 2.176792 GCGAGCGCCAAAAAGAGG 59.823 61.111 2.29 0.00 34.56 3.69
6722 8081 2.617274 GCGAGCGCCAAAAAGAGGT 61.617 57.895 2.29 0.00 34.56 3.85
6723 8082 1.949257 CGAGCGCCAAAAAGAGGTT 59.051 52.632 2.29 0.00 0.00 3.50
6724 8083 0.110192 CGAGCGCCAAAAAGAGGTTC 60.110 55.000 2.29 0.00 0.00 3.62
6725 8084 0.951558 GAGCGCCAAAAAGAGGTTCA 59.048 50.000 2.29 0.00 0.00 3.18
6726 8085 1.336755 GAGCGCCAAAAAGAGGTTCAA 59.663 47.619 2.29 0.00 0.00 2.69
6727 8086 1.754226 AGCGCCAAAAAGAGGTTCAAA 59.246 42.857 2.29 0.00 0.00 2.69
6728 8087 1.858458 GCGCCAAAAAGAGGTTCAAAC 59.142 47.619 0.00 0.00 0.00 2.93
6747 8106 3.717294 GAAGGCCGGCCCAAGAGA 61.717 66.667 41.72 0.00 36.58 3.10
6748 8107 3.978571 GAAGGCCGGCCCAAGAGAC 62.979 68.421 41.72 20.19 36.58 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 0.038526 ACGTTGCCCAACTCTAGTCG 60.039 55.000 9.23 0.00 39.08 4.18
79 80 2.034066 AGCACATCCCCCACGTTG 59.966 61.111 0.00 0.00 0.00 4.10
82 83 4.838152 CCGAGCACATCCCCCACG 62.838 72.222 0.00 0.00 0.00 4.94
90 91 2.949644 GGTTTATAAAGGCCGAGCACAT 59.050 45.455 0.00 0.00 0.00 3.21
113 114 1.620822 GTGAGAACAACCCAATGCCT 58.379 50.000 0.00 0.00 0.00 4.75
295 296 7.020914 AGCAGCATAAGTTAAGTGAATTAGC 57.979 36.000 0.00 0.00 0.00 3.09
353 371 5.812286 ACCCGGATATTAAGCGGAATAATT 58.188 37.500 0.73 0.00 0.00 1.40
360 378 2.249844 ACAACCCGGATATTAAGCGG 57.750 50.000 0.73 0.00 0.00 5.52
487 505 2.205074 CTGCTACGGGCTTCAACATAG 58.795 52.381 4.43 0.00 42.39 2.23
497 515 1.287425 GTATGTTCACTGCTACGGGC 58.713 55.000 0.00 0.00 42.22 6.13
507 525 9.599322 CTAGAAACAAGTTCAATGTATGTTCAC 57.401 33.333 0.00 0.00 38.86 3.18
510 528 9.561069 ACTCTAGAAACAAGTTCAATGTATGTT 57.439 29.630 0.00 0.00 38.86 2.71
667 1902 1.376424 CAGCGGTGAGTCAATGCCT 60.376 57.895 9.50 0.00 0.00 4.75
899 2134 2.224670 ACGGGAATGCACACTAAAAGGA 60.225 45.455 0.00 0.00 0.00 3.36
934 2170 4.307432 CTGGAACGACAGACACACTAATT 58.693 43.478 0.00 0.00 40.97 1.40
1099 2335 5.279607 CCAAGCTTCTCCAATCCAAATCAAA 60.280 40.000 0.00 0.00 0.00 2.69
1209 2445 4.057406 TGAGCTTCCAAATGTTTTGGTG 57.943 40.909 16.38 12.25 40.40 4.17
1256 2492 6.874278 AGGAATTCCGGATACATGATATCA 57.126 37.500 18.82 8.10 42.08 2.15
1257 2493 7.782049 TGTAGGAATTCCGGATACATGATATC 58.218 38.462 18.82 3.34 42.08 1.63
1302 2538 3.211045 TCCAAACAACAGTTGTAGAGCC 58.789 45.455 19.45 0.00 44.59 4.70
1309 2545 4.997565 ACTTGACATCCAAACAACAGTTG 58.002 39.130 12.03 12.03 33.76 3.16
1402 2638 4.631131 TGAGCGACAACTAATATGGGATG 58.369 43.478 0.00 0.00 0.00 3.51
1403 2639 4.955811 TGAGCGACAACTAATATGGGAT 57.044 40.909 0.00 0.00 0.00 3.85
1445 2696 2.073816 CCGTCCATGTTAGTTGTCACC 58.926 52.381 0.00 0.00 0.00 4.02
1483 2734 4.076394 CCCTACGTTTCTTTTTGGGATGA 58.924 43.478 0.00 0.00 35.40 2.92
1511 2762 7.657354 GCATAGAATTTTGGTTCCTCTGTTTTT 59.343 33.333 0.00 0.00 0.00 1.94
1616 2867 7.880160 ACGATTTTTGAAGGATATGATTCCA 57.120 32.000 0.00 0.00 38.32 3.53
1636 2887 6.642707 TGGAACAAAGGAAAAACATACGAT 57.357 33.333 0.00 0.00 31.92 3.73
1671 2922 4.875544 GCATCCTGCTACGTAAATTTCA 57.124 40.909 0.00 0.00 40.96 2.69
1813 3064 1.929836 GAAGCAATAGTCAGCTGACCG 59.070 52.381 37.09 25.28 45.85 4.79
1855 3106 3.561725 CCTTCCTTGAGTGACTTGTTGAC 59.438 47.826 0.00 0.00 0.00 3.18
1886 3137 3.181487 GGCATTACCACATTCGCAGAATT 60.181 43.478 1.76 0.00 39.68 2.17
1913 3164 0.251916 TTATTCAGGGTGTCAGGCCG 59.748 55.000 0.00 0.00 0.00 6.13
2200 3452 5.422331 TGGGTTAGAAAACAACAATTGGTCA 59.578 36.000 10.83 0.00 37.34 4.02
2231 3483 6.266558 GGTACAGAGATCTCCATTAGACACAT 59.733 42.308 19.30 0.00 36.93 3.21
2303 3555 4.747605 GGATTAAGCCAAAGCGAAAAACAA 59.252 37.500 4.48 0.00 46.67 2.83
2612 3865 5.504994 GCTGTATTCCGAAGTTGTGACAAAA 60.505 40.000 0.00 0.00 0.00 2.44
2716 3971 7.194607 ACAAATCAATATAGAAGTGATGCCG 57.805 36.000 0.00 0.00 32.38 5.69
2886 4144 6.909357 GCGACCCGTGTATATATATGAGTAAC 59.091 42.308 5.44 0.00 0.00 2.50
2902 4160 3.320078 CGAATAGCGCGACCCGTG 61.320 66.667 12.10 0.00 40.54 4.94
2904 4162 3.022914 GACGAATAGCGCGACCCG 61.023 66.667 12.10 7.82 46.04 5.28
2905 4163 2.103538 TGACGAATAGCGCGACCC 59.896 61.111 12.10 0.00 46.04 4.46
2906 4164 2.228914 GGTGACGAATAGCGCGACC 61.229 63.158 12.10 0.00 46.04 4.79
2907 4165 2.228914 GGGTGACGAATAGCGCGAC 61.229 63.158 12.10 0.04 46.04 5.19
2909 4167 2.104331 AGGGTGACGAATAGCGCG 59.896 61.111 0.00 0.00 46.04 6.86
2910 4168 1.883084 CCAGGGTGACGAATAGCGC 60.883 63.158 0.00 0.00 46.04 5.92
2911 4169 1.956629 ACCCAGGGTGACGAATAGCG 61.957 60.000 11.70 0.00 39.57 4.26
2912 4170 1.905512 ACCCAGGGTGACGAATAGC 59.094 57.895 11.70 0.00 32.98 2.97
2919 4177 9.736671 GAATAACTATTCCTCACCCAGGGTGAC 62.737 48.148 34.62 17.53 44.45 3.67
2920 4178 7.827072 GAATAACTATTCCTCACCCAGGGTGA 61.827 46.154 35.32 35.32 45.54 4.02
2921 4179 5.687706 GAATAACTATTCCTCACCCAGGGTG 60.688 48.000 31.06 31.06 43.50 4.61
2922 4180 2.361085 AACTATTCCTCACCCAGGGT 57.639 50.000 4.76 4.76 43.67 4.34
2923 4181 4.660771 AGAATAACTATTCCTCACCCAGGG 59.339 45.833 2.85 2.85 43.67 4.45
2924 4182 5.896073 AGAATAACTATTCCTCACCCAGG 57.104 43.478 5.95 0.00 42.29 4.45
2925 4183 6.889198 TGAAGAATAACTATTCCTCACCCAG 58.111 40.000 6.65 0.00 42.29 4.45
2926 4184 6.884472 TGAAGAATAACTATTCCTCACCCA 57.116 37.500 6.65 0.00 42.29 4.51
2930 4188 5.132144 GGGGGTGAAGAATAACTATTCCTCA 59.868 44.000 6.65 6.65 42.29 3.86
2931 4189 5.369993 AGGGGGTGAAGAATAACTATTCCTC 59.630 44.000 5.95 4.07 42.29 3.71
2932 4190 5.297799 AGGGGGTGAAGAATAACTATTCCT 58.702 41.667 5.95 0.00 42.29 3.36
2933 4191 5.369993 AGAGGGGGTGAAGAATAACTATTCC 59.630 44.000 5.95 0.00 42.29 3.01
2934 4192 6.327887 AGAGAGGGGGTGAAGAATAACTATTC 59.672 42.308 1.83 1.83 41.78 1.75
2935 4193 6.213525 AGAGAGGGGGTGAAGAATAACTATT 58.786 40.000 0.00 0.00 0.00 1.73
2936 4194 5.793967 AGAGAGGGGGTGAAGAATAACTAT 58.206 41.667 0.00 0.00 0.00 2.12
2937 4195 5.222278 AGAGAGGGGGTGAAGAATAACTA 57.778 43.478 0.00 0.00 0.00 2.24
2938 4196 4.081695 AGAGAGGGGGTGAAGAATAACT 57.918 45.455 0.00 0.00 0.00 2.24
2939 4197 6.502074 AATAGAGAGGGGGTGAAGAATAAC 57.498 41.667 0.00 0.00 0.00 1.89
2940 4198 7.183839 TCAAAATAGAGAGGGGGTGAAGAATAA 59.816 37.037 0.00 0.00 0.00 1.40
2941 4199 6.676632 TCAAAATAGAGAGGGGGTGAAGAATA 59.323 38.462 0.00 0.00 0.00 1.75
2942 4200 5.492524 TCAAAATAGAGAGGGGGTGAAGAAT 59.507 40.000 0.00 0.00 0.00 2.40
2943 4201 4.849810 TCAAAATAGAGAGGGGGTGAAGAA 59.150 41.667 0.00 0.00 0.00 2.52
2944 4202 4.225267 GTCAAAATAGAGAGGGGGTGAAGA 59.775 45.833 0.00 0.00 0.00 2.87
2945 4203 4.518249 GTCAAAATAGAGAGGGGGTGAAG 58.482 47.826 0.00 0.00 0.00 3.02
2946 4204 3.055385 CGTCAAAATAGAGAGGGGGTGAA 60.055 47.826 0.00 0.00 0.00 3.18
2947 4205 2.500098 CGTCAAAATAGAGAGGGGGTGA 59.500 50.000 0.00 0.00 0.00 4.02
2948 4206 2.236395 ACGTCAAAATAGAGAGGGGGTG 59.764 50.000 0.00 0.00 0.00 4.61
2949 4207 2.500504 GACGTCAAAATAGAGAGGGGGT 59.499 50.000 11.55 0.00 0.00 4.95
2950 4208 2.500098 TGACGTCAAAATAGAGAGGGGG 59.500 50.000 17.62 0.00 0.00 5.40
2951 4209 3.887621 TGACGTCAAAATAGAGAGGGG 57.112 47.619 17.62 0.00 0.00 4.79
2952 4210 4.034510 GCATTGACGTCAAAATAGAGAGGG 59.965 45.833 32.69 13.54 39.55 4.30
2953 4211 4.631377 TGCATTGACGTCAAAATAGAGAGG 59.369 41.667 32.69 12.12 39.55 3.69
2954 4212 5.446473 GGTGCATTGACGTCAAAATAGAGAG 60.446 44.000 32.69 16.02 39.55 3.20
2955 4213 4.391830 GGTGCATTGACGTCAAAATAGAGA 59.608 41.667 32.69 9.96 39.55 3.10
2956 4214 4.651994 GGTGCATTGACGTCAAAATAGAG 58.348 43.478 32.69 18.73 39.55 2.43
2957 4215 3.124466 CGGTGCATTGACGTCAAAATAGA 59.876 43.478 32.69 11.54 39.55 1.98
2958 4216 3.120338 ACGGTGCATTGACGTCAAAATAG 60.120 43.478 32.69 22.44 39.55 1.73
2959 4217 2.809119 ACGGTGCATTGACGTCAAAATA 59.191 40.909 32.69 18.95 39.55 1.40
2960 4218 1.606668 ACGGTGCATTGACGTCAAAAT 59.393 42.857 32.69 16.45 39.55 1.82
2961 4219 1.018148 ACGGTGCATTGACGTCAAAA 58.982 45.000 32.69 19.17 39.55 2.44
2962 4220 1.867166 TACGGTGCATTGACGTCAAA 58.133 45.000 32.69 15.69 41.53 2.69
2963 4221 2.087501 ATACGGTGCATTGACGTCAA 57.912 45.000 31.41 31.41 41.53 3.18
2964 4222 2.087501 AATACGGTGCATTGACGTCA 57.912 45.000 15.76 15.76 41.53 4.35
2965 4223 3.465122 AAAATACGGTGCATTGACGTC 57.535 42.857 9.11 9.11 41.53 4.34
2966 4224 4.247258 TCTAAAATACGGTGCATTGACGT 58.753 39.130 12.08 12.08 43.88 4.34
2967 4225 4.850859 TCTAAAATACGGTGCATTGACG 57.149 40.909 0.00 0.00 0.00 4.35
2968 4226 6.410914 CGAAATCTAAAATACGGTGCATTGAC 59.589 38.462 0.00 0.00 0.00 3.18
2969 4227 6.092944 ACGAAATCTAAAATACGGTGCATTGA 59.907 34.615 0.00 0.00 0.00 2.57
2970 4228 6.255215 ACGAAATCTAAAATACGGTGCATTG 58.745 36.000 0.00 0.00 0.00 2.82
2971 4229 6.431198 ACGAAATCTAAAATACGGTGCATT 57.569 33.333 0.00 0.00 0.00 3.56
2972 4230 7.542534 TTACGAAATCTAAAATACGGTGCAT 57.457 32.000 0.00 0.00 0.00 3.96
2973 4231 6.964741 TTACGAAATCTAAAATACGGTGCA 57.035 33.333 0.00 0.00 0.00 4.57
2974 4232 8.831000 AATTTACGAAATCTAAAATACGGTGC 57.169 30.769 0.00 0.00 0.00 5.01
3022 4280 9.178427 GCGAGTATATATTTTCTTACGTTGTCT 57.822 33.333 0.00 0.00 0.00 3.41
3023 4281 8.423215 GGCGAGTATATATTTTCTTACGTTGTC 58.577 37.037 0.00 0.00 0.00 3.18
3024 4282 7.113965 CGGCGAGTATATATTTTCTTACGTTGT 59.886 37.037 0.00 0.00 0.00 3.32
3025 4283 7.113965 ACGGCGAGTATATATTTTCTTACGTTG 59.886 37.037 16.62 0.00 0.00 4.10
3026 4284 7.141363 ACGGCGAGTATATATTTTCTTACGTT 58.859 34.615 16.62 0.00 0.00 3.99
3027 4285 6.672147 ACGGCGAGTATATATTTTCTTACGT 58.328 36.000 16.62 0.00 0.00 3.57
3028 4286 8.659569 TTACGGCGAGTATATATTTTCTTACG 57.340 34.615 16.62 0.00 34.88 3.18
3077 4335 9.284594 GGTGTACACTATATTTTACGTTCGTAA 57.715 33.333 24.55 12.72 0.00 3.18
3078 4336 8.454894 TGGTGTACACTATATTTTACGTTCGTA 58.545 33.333 24.55 0.78 0.00 3.43
3079 4337 7.312154 TGGTGTACACTATATTTTACGTTCGT 58.688 34.615 24.55 2.91 0.00 3.85
3080 4338 7.739022 TGGTGTACACTATATTTTACGTTCG 57.261 36.000 24.55 0.00 0.00 3.95
3091 4349 9.198837 CGCATTTTATGTATGGTGTACACTATA 57.801 33.333 23.66 23.66 34.29 1.31
3092 4350 7.929245 TCGCATTTTATGTATGGTGTACACTAT 59.071 33.333 25.60 25.60 36.46 2.12
3093 4351 7.266400 TCGCATTTTATGTATGGTGTACACTA 58.734 34.615 24.55 20.03 0.00 2.74
3094 4352 6.110033 TCGCATTTTATGTATGGTGTACACT 58.890 36.000 24.55 9.37 0.00 3.55
3095 4353 6.352682 TCGCATTTTATGTATGGTGTACAC 57.647 37.500 18.01 18.01 0.00 2.90
3096 4354 8.840833 ATATCGCATTTTATGTATGGTGTACA 57.159 30.769 0.00 0.00 0.00 2.90
3099 4357 9.066892 AGAAATATCGCATTTTATGTATGGTGT 57.933 29.630 0.00 0.00 0.00 4.16
3100 4358 9.333497 CAGAAATATCGCATTTTATGTATGGTG 57.667 33.333 0.00 0.00 0.00 4.17
3101 4359 8.514594 CCAGAAATATCGCATTTTATGTATGGT 58.485 33.333 0.00 0.00 0.00 3.55
3102 4360 8.514594 ACCAGAAATATCGCATTTTATGTATGG 58.485 33.333 0.00 0.00 0.00 2.74
3103 4361 9.546909 GACCAGAAATATCGCATTTTATGTATG 57.453 33.333 0.00 0.00 0.00 2.39
3104 4362 9.507329 AGACCAGAAATATCGCATTTTATGTAT 57.493 29.630 0.00 0.00 0.00 2.29
3105 4363 8.902540 AGACCAGAAATATCGCATTTTATGTA 57.097 30.769 0.00 0.00 0.00 2.29
3106 4364 7.807977 AGACCAGAAATATCGCATTTTATGT 57.192 32.000 0.00 0.00 0.00 2.29
3217 4475 9.350357 GGTAATCTTACGATCGCTTCATAAATA 57.650 33.333 16.60 0.00 34.50 1.40
3218 4476 8.088981 AGGTAATCTTACGATCGCTTCATAAAT 58.911 33.333 16.60 0.00 34.50 1.40
3219 4477 7.431249 AGGTAATCTTACGATCGCTTCATAAA 58.569 34.615 16.60 0.00 34.50 1.40
3220 4478 6.978338 AGGTAATCTTACGATCGCTTCATAA 58.022 36.000 16.60 4.99 34.50 1.90
3221 4479 6.570672 AGGTAATCTTACGATCGCTTCATA 57.429 37.500 16.60 0.00 34.50 2.15
3222 4480 5.455056 AGGTAATCTTACGATCGCTTCAT 57.545 39.130 16.60 0.00 34.50 2.57
3223 4481 4.913335 AGGTAATCTTACGATCGCTTCA 57.087 40.909 16.60 0.00 34.50 3.02
3224 4482 5.392286 CCTAGGTAATCTTACGATCGCTTC 58.608 45.833 16.60 0.00 34.50 3.86
3225 4483 4.217983 CCCTAGGTAATCTTACGATCGCTT 59.782 45.833 16.60 0.00 34.50 4.68
3226 4484 3.757493 CCCTAGGTAATCTTACGATCGCT 59.243 47.826 16.60 5.20 34.50 4.93
3227 4485 3.505293 ACCCTAGGTAATCTTACGATCGC 59.495 47.826 16.60 0.00 32.11 4.58
3228 4486 4.758674 TCACCCTAGGTAATCTTACGATCG 59.241 45.833 14.88 14.88 32.11 3.69
3229 4487 6.489361 TCTTCACCCTAGGTAATCTTACGATC 59.511 42.308 8.29 0.00 32.11 3.69
3230 4488 6.371278 TCTTCACCCTAGGTAATCTTACGAT 58.629 40.000 8.29 0.00 32.11 3.73
3231 4489 5.759059 TCTTCACCCTAGGTAATCTTACGA 58.241 41.667 8.29 0.00 32.11 3.43
3232 4490 6.461110 TTCTTCACCCTAGGTAATCTTACG 57.539 41.667 8.29 0.00 32.11 3.18
3233 4491 9.761504 GTTATTCTTCACCCTAGGTAATCTTAC 57.238 37.037 8.29 0.00 32.11 2.34
3234 4492 9.725206 AGTTATTCTTCACCCTAGGTAATCTTA 57.275 33.333 8.29 0.00 32.11 2.10
3235 4493 8.625467 AGTTATTCTTCACCCTAGGTAATCTT 57.375 34.615 8.29 0.00 32.11 2.40
3236 4494 8.625467 AAGTTATTCTTCACCCTAGGTAATCT 57.375 34.615 8.29 0.00 32.11 2.40
3253 4511 6.016777 CACCCAGGATGCAGAATAAGTTATTC 60.017 42.308 22.80 22.80 39.03 1.75
3254 4512 5.829924 CACCCAGGATGCAGAATAAGTTATT 59.170 40.000 7.87 7.87 31.97 1.40
3255 4513 5.132648 TCACCCAGGATGCAGAATAAGTTAT 59.867 40.000 0.00 0.00 31.97 1.89
3256 4514 4.473196 TCACCCAGGATGCAGAATAAGTTA 59.527 41.667 0.00 0.00 31.97 2.24
3257 4515 3.266772 TCACCCAGGATGCAGAATAAGTT 59.733 43.478 0.00 0.00 31.97 2.66
3258 4516 2.846206 TCACCCAGGATGCAGAATAAGT 59.154 45.455 0.00 0.00 31.97 2.24
3259 4517 3.565764 TCACCCAGGATGCAGAATAAG 57.434 47.619 0.00 0.00 31.97 1.73
3260 4518 3.459227 TCATCACCCAGGATGCAGAATAA 59.541 43.478 0.00 0.00 43.44 1.40
3261 4519 3.047857 TCATCACCCAGGATGCAGAATA 58.952 45.455 0.00 0.00 43.44 1.75
3262 4520 1.848388 TCATCACCCAGGATGCAGAAT 59.152 47.619 0.00 0.00 43.44 2.40
3263 4521 1.288188 TCATCACCCAGGATGCAGAA 58.712 50.000 0.00 0.00 43.44 3.02
3264 4522 1.288188 TTCATCACCCAGGATGCAGA 58.712 50.000 0.00 0.00 43.44 4.26
3265 4523 2.359981 ATTCATCACCCAGGATGCAG 57.640 50.000 0.00 0.00 43.44 4.41
3266 4524 2.779430 ACTATTCATCACCCAGGATGCA 59.221 45.455 0.00 0.00 43.44 3.96
3267 4525 3.498774 ACTATTCATCACCCAGGATGC 57.501 47.619 0.00 0.00 43.44 3.91
3268 4526 7.456725 AGAAATACTATTCATCACCCAGGATG 58.543 38.462 0.00 0.00 44.78 3.51
3269 4527 7.639062 AGAAATACTATTCATCACCCAGGAT 57.361 36.000 0.00 0.00 0.00 3.24
3270 4528 7.567250 TGTAGAAATACTATTCATCACCCAGGA 59.433 37.037 0.00 0.00 33.39 3.86
3271 4529 7.657761 GTGTAGAAATACTATTCATCACCCAGG 59.342 40.741 0.00 0.00 33.39 4.45
3272 4530 8.204160 TGTGTAGAAATACTATTCATCACCCAG 58.796 37.037 0.00 0.00 35.91 4.45
3273 4531 7.985184 GTGTGTAGAAATACTATTCATCACCCA 59.015 37.037 0.00 0.00 35.91 4.51
3274 4532 7.985184 TGTGTGTAGAAATACTATTCATCACCC 59.015 37.037 0.00 0.00 35.91 4.61
3275 4533 8.818057 GTGTGTGTAGAAATACTATTCATCACC 58.182 37.037 0.00 0.00 35.91 4.02
3276 4534 9.366216 TGTGTGTGTAGAAATACTATTCATCAC 57.634 33.333 0.00 0.00 36.57 3.06
3277 4535 9.366216 GTGTGTGTGTAGAAATACTATTCATCA 57.634 33.333 0.00 0.00 33.39 3.07
3278 4536 9.366216 TGTGTGTGTGTAGAAATACTATTCATC 57.634 33.333 0.00 0.00 33.39 2.92
3279 4537 9.151471 GTGTGTGTGTGTAGAAATACTATTCAT 57.849 33.333 0.00 0.00 33.39 2.57
3280 4538 8.145122 TGTGTGTGTGTGTAGAAATACTATTCA 58.855 33.333 0.00 0.00 33.39 2.57
3281 4539 8.433126 GTGTGTGTGTGTGTAGAAATACTATTC 58.567 37.037 0.00 0.00 33.39 1.75
3282 4540 7.115805 CGTGTGTGTGTGTGTAGAAATACTATT 59.884 37.037 0.00 0.00 33.39 1.73
3283 4541 6.584942 CGTGTGTGTGTGTGTAGAAATACTAT 59.415 38.462 0.00 0.00 33.39 2.12
3284 4542 5.916320 CGTGTGTGTGTGTGTAGAAATACTA 59.084 40.000 0.00 0.00 0.00 1.82
3285 4543 4.743151 CGTGTGTGTGTGTGTAGAAATACT 59.257 41.667 0.00 0.00 0.00 2.12
3286 4544 4.607557 GCGTGTGTGTGTGTGTAGAAATAC 60.608 45.833 0.00 0.00 0.00 1.89
3287 4545 3.491639 GCGTGTGTGTGTGTGTAGAAATA 59.508 43.478 0.00 0.00 0.00 1.40
3288 4546 2.286833 GCGTGTGTGTGTGTGTAGAAAT 59.713 45.455 0.00 0.00 0.00 2.17
3289 4547 1.661617 GCGTGTGTGTGTGTGTAGAAA 59.338 47.619 0.00 0.00 0.00 2.52
3290 4548 1.282817 GCGTGTGTGTGTGTGTAGAA 58.717 50.000 0.00 0.00 0.00 2.10
3291 4549 0.868177 CGCGTGTGTGTGTGTGTAGA 60.868 55.000 0.00 0.00 0.00 2.59
3292 4550 1.557907 CGCGTGTGTGTGTGTGTAG 59.442 57.895 0.00 0.00 0.00 2.74
3293 4551 2.518312 GCGCGTGTGTGTGTGTGTA 61.518 57.895 8.43 0.00 0.00 2.90
3294 4552 3.860125 GCGCGTGTGTGTGTGTGT 61.860 61.111 8.43 0.00 0.00 3.72
3295 4553 4.918060 CGCGCGTGTGTGTGTGTG 62.918 66.667 24.19 0.00 0.00 3.82
3315 4573 3.858989 TGTGTGTGTGTGTGCGCG 61.859 61.111 0.00 0.00 0.00 6.86
3316 4574 2.277247 GTGTGTGTGTGTGTGCGC 60.277 61.111 0.00 0.00 0.00 6.09
3317 4575 0.933796 TATGTGTGTGTGTGTGTGCG 59.066 50.000 0.00 0.00 0.00 5.34
3318 4576 3.624326 ATTATGTGTGTGTGTGTGTGC 57.376 42.857 0.00 0.00 0.00 4.57
3319 4577 5.339177 ACAAATTATGTGTGTGTGTGTGTG 58.661 37.500 0.00 0.00 41.93 3.82
3320 4578 5.449862 GGACAAATTATGTGTGTGTGTGTGT 60.450 40.000 0.00 0.00 44.12 3.72
3321 4579 4.975502 GGACAAATTATGTGTGTGTGTGTG 59.024 41.667 0.00 0.00 44.12 3.82
3322 4580 4.642437 TGGACAAATTATGTGTGTGTGTGT 59.358 37.500 0.00 0.00 44.12 3.72
3323 4581 5.180367 TGGACAAATTATGTGTGTGTGTG 57.820 39.130 0.00 0.00 44.12 3.82
3324 4582 5.301551 ACATGGACAAATTATGTGTGTGTGT 59.698 36.000 0.00 0.00 44.12 3.72
3325 4583 5.630264 CACATGGACAAATTATGTGTGTGTG 59.370 40.000 9.27 2.36 44.12 3.82
3326 4584 5.771469 CACATGGACAAATTATGTGTGTGT 58.229 37.500 9.27 0.00 44.12 3.72
3332 4590 5.336690 GGTGCTTCACATGGACAAATTATGT 60.337 40.000 0.00 0.00 39.74 2.29
3333 4591 5.104374 GGTGCTTCACATGGACAAATTATG 58.896 41.667 0.00 0.00 35.86 1.90
3334 4592 5.018809 AGGTGCTTCACATGGACAAATTAT 58.981 37.500 0.00 0.00 35.86 1.28
3335 4593 4.406456 AGGTGCTTCACATGGACAAATTA 58.594 39.130 0.00 0.00 35.86 1.40
3336 4594 3.233507 AGGTGCTTCACATGGACAAATT 58.766 40.909 0.00 0.00 35.86 1.82
3337 4595 2.880443 AGGTGCTTCACATGGACAAAT 58.120 42.857 0.00 0.00 35.86 2.32
3338 4596 2.361757 CAAGGTGCTTCACATGGACAAA 59.638 45.455 0.00 0.00 35.86 2.83
3392 4650 6.423604 CACGCATGACACATGGATACTATTTA 59.576 38.462 12.56 0.00 37.61 1.40
3537 4795 6.017687 CGATTTGGAATGTGAGCTTATGATCA 60.018 38.462 0.00 0.00 36.12 2.92
3618 4876 2.305635 TGCAAACAGAAGGAGATAGGCA 59.694 45.455 0.00 0.00 0.00 4.75
3747 5014 3.071312 TGGCCATCATTCTTGCAAAGTTT 59.929 39.130 0.00 0.00 46.34 2.66
3833 5100 7.566569 AGTTCTAGCCTAAATAACTTTCCTCC 58.433 38.462 0.00 0.00 0.00 4.30
4205 5481 4.275936 AGAATAAACAAGTCACCACTGTGC 59.724 41.667 1.29 0.00 42.46 4.57
4235 5511 4.471386 AGGTAGGCTAACAGACAATGATGT 59.529 41.667 12.94 0.00 44.25 3.06
4285 5561 1.238439 ACGGTCCAAAATGAGCAGTG 58.762 50.000 0.00 0.00 33.04 3.66
4303 5579 3.696548 CCTCCTGGCCTTCAAATAGAAAC 59.303 47.826 3.32 0.00 35.40 2.78
4324 5600 0.890683 CCACAACCAAGAATCTGGCC 59.109 55.000 0.00 0.00 40.45 5.36
4484 5760 5.848406 TCACTGTTTTCCACACAAAAACTT 58.152 33.333 11.42 0.00 43.65 2.66
4605 5964 6.868864 GTGATAGCACAAGTCTAGAGAAAACA 59.131 38.462 6.17 0.00 44.51 2.83
4631 5990 5.069914 TCGAGCCCTTATTTATAGACAAGCA 59.930 40.000 0.00 0.00 0.00 3.91
5062 6421 3.537337 TCTTTTCATAGGACCCCTCCAA 58.463 45.455 0.00 0.00 39.39 3.53
5223 6582 5.541845 ACGACATTTCATTTCTCTCAGACA 58.458 37.500 0.00 0.00 0.00 3.41
5794 7153 2.101415 ACCTTTTCTGCCAAAAGAGTGC 59.899 45.455 16.07 0.00 39.04 4.40
5830 7189 2.159226 ACAGGACGATAGCAGTAACAGC 60.159 50.000 0.00 0.00 42.67 4.40
6044 7403 6.886307 TGAAACTTCACTTTTGCAAAAACTG 58.114 32.000 23.92 20.28 31.01 3.16
6159 7518 6.603201 ACCAAATCAGTACCATTAGTCCATTG 59.397 38.462 0.00 0.00 0.00 2.82
6247 7606 5.108517 ACCGAATTGCGCAAATCAAAATAT 58.891 33.333 31.33 9.89 39.11 1.28
6250 7609 2.748605 ACCGAATTGCGCAAATCAAAA 58.251 38.095 31.33 8.57 39.11 2.44
6304 7663 5.470777 CACCCAAATGAGCAAATCAAATTGT 59.529 36.000 0.00 0.00 42.53 2.71
6315 7674 0.758310 TTGCCACACCCAAATGAGCA 60.758 50.000 0.00 0.00 32.93 4.26
6318 7677 3.643320 TGTTTATTGCCACACCCAAATGA 59.357 39.130 0.00 0.00 0.00 2.57
6361 7720 8.016801 GCCAAAAATGGATTTTACAAATGTCAG 58.983 33.333 0.00 0.00 39.20 3.51
6425 7784 2.905075 CATAAGAATCACTGGCACGGA 58.095 47.619 0.00 0.00 38.67 4.69
6446 7805 7.144722 TGTTTTGTCTTAATGTGCAGGATAG 57.855 36.000 0.00 0.00 0.00 2.08
6484 7843 1.133809 TGCTGCTCCCCAGGTTTAGT 61.134 55.000 0.00 0.00 42.03 2.24
6486 7845 0.255890 GATGCTGCTCCCCAGGTTTA 59.744 55.000 0.00 0.00 42.03 2.01
6505 7864 7.692908 ATTCAAACAACCACGAAATGTTTAG 57.307 32.000 11.01 7.75 43.36 1.85
6506 7865 7.380065 GCTATTCAAACAACCACGAAATGTTTA 59.620 33.333 11.01 1.67 43.36 2.01
6507 7866 6.200097 GCTATTCAAACAACCACGAAATGTTT 59.800 34.615 0.00 0.00 45.39 2.83
6508 7867 5.689961 GCTATTCAAACAACCACGAAATGTT 59.310 36.000 0.00 0.00 38.85 2.71
6509 7868 5.219633 GCTATTCAAACAACCACGAAATGT 58.780 37.500 0.00 0.00 0.00 2.71
6510 7869 4.320690 CGCTATTCAAACAACCACGAAATG 59.679 41.667 0.00 0.00 0.00 2.32
6511 7870 4.214545 TCGCTATTCAAACAACCACGAAAT 59.785 37.500 0.00 0.00 0.00 2.17
6512 7871 3.560481 TCGCTATTCAAACAACCACGAAA 59.440 39.130 0.00 0.00 0.00 3.46
6513 7872 3.132160 TCGCTATTCAAACAACCACGAA 58.868 40.909 0.00 0.00 0.00 3.85
6514 7873 2.756829 TCGCTATTCAAACAACCACGA 58.243 42.857 0.00 0.00 0.00 4.35
6515 7874 3.124466 TCATCGCTATTCAAACAACCACG 59.876 43.478 0.00 0.00 0.00 4.94
6516 7875 4.678509 TCATCGCTATTCAAACAACCAC 57.321 40.909 0.00 0.00 0.00 4.16
6517 7876 6.993786 TTATCATCGCTATTCAAACAACCA 57.006 33.333 0.00 0.00 0.00 3.67
6518 7877 7.753132 TGTTTTATCATCGCTATTCAAACAACC 59.247 33.333 0.00 0.00 31.65 3.77
6519 7878 8.667987 TGTTTTATCATCGCTATTCAAACAAC 57.332 30.769 0.00 0.00 31.65 3.32
6520 7879 9.340695 CTTGTTTTATCATCGCTATTCAAACAA 57.659 29.630 0.00 0.00 39.39 2.83
6521 7880 8.511321 ACTTGTTTTATCATCGCTATTCAAACA 58.489 29.630 0.00 0.00 32.48 2.83
6522 7881 8.895932 ACTTGTTTTATCATCGCTATTCAAAC 57.104 30.769 0.00 0.00 0.00 2.93
6523 7882 9.340695 CAACTTGTTTTATCATCGCTATTCAAA 57.659 29.630 0.00 0.00 0.00 2.69
6524 7883 8.511321 ACAACTTGTTTTATCATCGCTATTCAA 58.489 29.630 0.00 0.00 0.00 2.69
6525 7884 8.039603 ACAACTTGTTTTATCATCGCTATTCA 57.960 30.769 0.00 0.00 0.00 2.57
6526 7885 9.422196 GTACAACTTGTTTTATCATCGCTATTC 57.578 33.333 0.00 0.00 0.00 1.75
6527 7886 9.162764 AGTACAACTTGTTTTATCATCGCTATT 57.837 29.630 0.00 0.00 0.00 1.73
6528 7887 8.718102 AGTACAACTTGTTTTATCATCGCTAT 57.282 30.769 0.00 0.00 0.00 2.97
6529 7888 9.297586 CTAGTACAACTTGTTTTATCATCGCTA 57.702 33.333 0.00 0.00 0.00 4.26
6530 7889 7.277981 CCTAGTACAACTTGTTTTATCATCGCT 59.722 37.037 0.00 0.00 0.00 4.93
6531 7890 7.277098 TCCTAGTACAACTTGTTTTATCATCGC 59.723 37.037 0.00 0.00 0.00 4.58
6532 7891 8.697846 TCCTAGTACAACTTGTTTTATCATCG 57.302 34.615 0.00 0.00 0.00 3.84
6584 7943 9.887406 CCGTAAAAGCTTATTCTTAACAGAAAA 57.113 29.630 0.00 0.00 42.53 2.29
6585 7944 9.275398 TCCGTAAAAGCTTATTCTTAACAGAAA 57.725 29.630 0.00 0.00 42.53 2.52
6586 7945 8.836268 TCCGTAAAAGCTTATTCTTAACAGAA 57.164 30.769 0.00 0.00 43.45 3.02
6587 7946 8.836268 TTCCGTAAAAGCTTATTCTTAACAGA 57.164 30.769 0.00 0.00 0.00 3.41
6588 7947 9.887406 TTTTCCGTAAAAGCTTATTCTTAACAG 57.113 29.630 0.00 0.00 31.04 3.16
6593 7952 9.244799 CTTGTTTTTCCGTAAAAGCTTATTCTT 57.755 29.630 0.00 0.00 36.90 2.52
6594 7953 8.410912 ACTTGTTTTTCCGTAAAAGCTTATTCT 58.589 29.630 0.00 0.00 36.90 2.40
6595 7954 8.570096 ACTTGTTTTTCCGTAAAAGCTTATTC 57.430 30.769 0.00 0.00 36.90 1.75
6596 7955 8.936070 AACTTGTTTTTCCGTAAAAGCTTATT 57.064 26.923 0.00 0.00 36.90 1.40
6597 7956 8.813282 CAAACTTGTTTTTCCGTAAAAGCTTAT 58.187 29.630 0.00 0.00 36.90 1.73
6598 7957 7.275999 CCAAACTTGTTTTTCCGTAAAAGCTTA 59.724 33.333 0.00 0.00 36.90 3.09
6599 7958 6.091577 CCAAACTTGTTTTTCCGTAAAAGCTT 59.908 34.615 0.00 0.00 36.90 3.74
6600 7959 5.579119 CCAAACTTGTTTTTCCGTAAAAGCT 59.421 36.000 2.10 0.00 36.90 3.74
6601 7960 5.220510 CCCAAACTTGTTTTTCCGTAAAAGC 60.221 40.000 0.00 0.00 36.44 3.51
6602 7961 5.292345 CCCCAAACTTGTTTTTCCGTAAAAG 59.708 40.000 0.00 0.00 36.44 2.27
6603 7962 5.176592 CCCCAAACTTGTTTTTCCGTAAAA 58.823 37.500 0.00 0.00 33.41 1.52
6604 7963 4.222366 ACCCCAAACTTGTTTTTCCGTAAA 59.778 37.500 0.00 0.00 0.00 2.01
6605 7964 3.768215 ACCCCAAACTTGTTTTTCCGTAA 59.232 39.130 0.00 0.00 0.00 3.18
6606 7965 3.363627 ACCCCAAACTTGTTTTTCCGTA 58.636 40.909 0.00 0.00 0.00 4.02
6607 7966 2.181125 ACCCCAAACTTGTTTTTCCGT 58.819 42.857 0.00 0.00 0.00 4.69
6608 7967 2.971660 ACCCCAAACTTGTTTTTCCG 57.028 45.000 0.00 0.00 0.00 4.30
6609 7968 3.962063 TCCTACCCCAAACTTGTTTTTCC 59.038 43.478 0.00 0.00 0.00 3.13
6610 7969 4.891168 TCTCCTACCCCAAACTTGTTTTTC 59.109 41.667 0.00 0.00 0.00 2.29
6611 7970 4.874199 TCTCCTACCCCAAACTTGTTTTT 58.126 39.130 0.00 0.00 0.00 1.94
6612 7971 4.079385 ACTCTCCTACCCCAAACTTGTTTT 60.079 41.667 0.00 0.00 0.00 2.43
6613 7972 3.462205 ACTCTCCTACCCCAAACTTGTTT 59.538 43.478 0.00 0.00 0.00 2.83
6614 7973 3.053826 ACTCTCCTACCCCAAACTTGTT 58.946 45.455 0.00 0.00 0.00 2.83
6615 7974 2.638363 GACTCTCCTACCCCAAACTTGT 59.362 50.000 0.00 0.00 0.00 3.16
6616 7975 2.907042 AGACTCTCCTACCCCAAACTTG 59.093 50.000 0.00 0.00 0.00 3.16
6617 7976 3.277416 AGACTCTCCTACCCCAAACTT 57.723 47.619 0.00 0.00 0.00 2.66
6618 7977 4.045590 TCTTAGACTCTCCTACCCCAAACT 59.954 45.833 0.00 0.00 0.00 2.66
6619 7978 4.160065 GTCTTAGACTCTCCTACCCCAAAC 59.840 50.000 4.94 0.00 0.00 2.93
6620 7979 4.045590 AGTCTTAGACTCTCCTACCCCAAA 59.954 45.833 9.37 0.00 38.71 3.28
6621 7980 3.596956 AGTCTTAGACTCTCCTACCCCAA 59.403 47.826 9.37 0.00 38.71 4.12
6622 7981 3.199671 AGTCTTAGACTCTCCTACCCCA 58.800 50.000 9.37 0.00 38.71 4.96
6623 7982 3.957508 AGTCTTAGACTCTCCTACCCC 57.042 52.381 9.37 0.00 38.71 4.95
6633 7992 5.712917 CCAGGAGTACAAAGAGTCTTAGACT 59.287 44.000 15.44 15.44 46.42 3.24
6634 7993 5.477637 ACCAGGAGTACAAAGAGTCTTAGAC 59.522 44.000 5.65 3.85 0.00 2.59
6635 7994 5.642165 ACCAGGAGTACAAAGAGTCTTAGA 58.358 41.667 5.65 0.00 0.00 2.10
6636 7995 5.986501 ACCAGGAGTACAAAGAGTCTTAG 57.013 43.478 5.65 0.00 0.00 2.18
6637 7996 6.522054 CAAACCAGGAGTACAAAGAGTCTTA 58.478 40.000 5.65 0.00 0.00 2.10
6638 7997 5.368989 CAAACCAGGAGTACAAAGAGTCTT 58.631 41.667 0.00 0.00 0.00 3.01
6639 7998 4.743955 GCAAACCAGGAGTACAAAGAGTCT 60.744 45.833 0.00 0.00 0.00 3.24
6640 7999 3.498777 GCAAACCAGGAGTACAAAGAGTC 59.501 47.826 0.00 0.00 0.00 3.36
6641 8000 3.118038 TGCAAACCAGGAGTACAAAGAGT 60.118 43.478 0.00 0.00 0.00 3.24
6642 8001 3.251004 GTGCAAACCAGGAGTACAAAGAG 59.749 47.826 0.00 0.00 0.00 2.85
6643 8002 3.118038 AGTGCAAACCAGGAGTACAAAGA 60.118 43.478 0.00 0.00 0.00 2.52
6644 8003 3.214328 AGTGCAAACCAGGAGTACAAAG 58.786 45.455 0.00 0.00 0.00 2.77
6645 8004 3.290948 AGTGCAAACCAGGAGTACAAA 57.709 42.857 0.00 0.00 0.00 2.83
6646 8005 3.211045 GAAGTGCAAACCAGGAGTACAA 58.789 45.455 0.00 0.00 0.00 2.41
6647 8006 2.171659 TGAAGTGCAAACCAGGAGTACA 59.828 45.455 0.00 0.00 0.00 2.90
6648 8007 2.846193 TGAAGTGCAAACCAGGAGTAC 58.154 47.619 0.00 0.00 0.00 2.73
6649 8008 3.327757 AGATGAAGTGCAAACCAGGAGTA 59.672 43.478 0.00 0.00 0.00 2.59
6650 8009 2.107204 AGATGAAGTGCAAACCAGGAGT 59.893 45.455 0.00 0.00 0.00 3.85
6651 8010 2.787994 AGATGAAGTGCAAACCAGGAG 58.212 47.619 0.00 0.00 0.00 3.69
6652 8011 2.957402 AGATGAAGTGCAAACCAGGA 57.043 45.000 0.00 0.00 0.00 3.86
6653 8012 3.571401 AGAAAGATGAAGTGCAAACCAGG 59.429 43.478 0.00 0.00 0.00 4.45
6654 8013 4.843220 AGAAAGATGAAGTGCAAACCAG 57.157 40.909 0.00 0.00 0.00 4.00
6655 8014 6.503524 GTTAAGAAAGATGAAGTGCAAACCA 58.496 36.000 0.00 0.00 0.00 3.67
6656 8015 5.625311 CGTTAAGAAAGATGAAGTGCAAACC 59.375 40.000 0.00 0.00 0.00 3.27
6657 8016 5.625311 CCGTTAAGAAAGATGAAGTGCAAAC 59.375 40.000 0.00 0.00 0.00 2.93
6658 8017 5.278266 CCCGTTAAGAAAGATGAAGTGCAAA 60.278 40.000 0.00 0.00 0.00 3.68
6659 8018 4.215399 CCCGTTAAGAAAGATGAAGTGCAA 59.785 41.667 0.00 0.00 0.00 4.08
6660 8019 3.751175 CCCGTTAAGAAAGATGAAGTGCA 59.249 43.478 0.00 0.00 0.00 4.57
6661 8020 4.000988 TCCCGTTAAGAAAGATGAAGTGC 58.999 43.478 0.00 0.00 0.00 4.40
6662 8021 5.468746 TGTTCCCGTTAAGAAAGATGAAGTG 59.531 40.000 0.00 0.00 0.00 3.16
6663 8022 5.617252 TGTTCCCGTTAAGAAAGATGAAGT 58.383 37.500 0.00 0.00 0.00 3.01
6664 8023 5.932303 TCTGTTCCCGTTAAGAAAGATGAAG 59.068 40.000 0.00 0.00 0.00 3.02
6665 8024 5.860611 TCTGTTCCCGTTAAGAAAGATGAA 58.139 37.500 0.00 0.00 0.00 2.57
6666 8025 5.477607 TCTGTTCCCGTTAAGAAAGATGA 57.522 39.130 0.00 0.00 0.00 2.92
6667 8026 6.149474 ACATTCTGTTCCCGTTAAGAAAGATG 59.851 38.462 0.00 0.00 32.72 2.90
6668 8027 6.238648 ACATTCTGTTCCCGTTAAGAAAGAT 58.761 36.000 0.00 0.00 32.72 2.40
6669 8028 5.617252 ACATTCTGTTCCCGTTAAGAAAGA 58.383 37.500 0.00 0.00 32.72 2.52
6670 8029 5.941948 ACATTCTGTTCCCGTTAAGAAAG 57.058 39.130 0.00 0.00 32.72 2.62
6671 8030 6.072893 GCTAACATTCTGTTCCCGTTAAGAAA 60.073 38.462 0.00 0.00 40.22 2.52
6672 8031 5.410439 GCTAACATTCTGTTCCCGTTAAGAA 59.590 40.000 0.00 0.00 40.22 2.52
6673 8032 4.933400 GCTAACATTCTGTTCCCGTTAAGA 59.067 41.667 0.00 0.00 40.22 2.10
6674 8033 4.201685 CGCTAACATTCTGTTCCCGTTAAG 60.202 45.833 0.00 0.00 40.22 1.85
6675 8034 3.680937 CGCTAACATTCTGTTCCCGTTAA 59.319 43.478 0.00 0.00 40.22 2.01
6676 8035 3.056678 TCGCTAACATTCTGTTCCCGTTA 60.057 43.478 0.00 0.00 40.22 3.18
6677 8036 2.073816 CGCTAACATTCTGTTCCCGTT 58.926 47.619 0.00 0.00 40.22 4.44
6678 8037 1.274167 TCGCTAACATTCTGTTCCCGT 59.726 47.619 0.00 0.00 40.22 5.28
6679 8038 1.659098 GTCGCTAACATTCTGTTCCCG 59.341 52.381 0.00 1.63 40.22 5.14
6680 8039 2.695359 TGTCGCTAACATTCTGTTCCC 58.305 47.619 0.00 0.00 40.22 3.97
6681 8040 3.125316 CCTTGTCGCTAACATTCTGTTCC 59.875 47.826 0.00 0.00 40.22 3.62
6682 8041 3.125316 CCCTTGTCGCTAACATTCTGTTC 59.875 47.826 0.00 0.00 40.22 3.18
6683 8042 3.074412 CCCTTGTCGCTAACATTCTGTT 58.926 45.455 0.00 0.00 43.88 3.16
6684 8043 2.699954 CCCTTGTCGCTAACATTCTGT 58.300 47.619 0.00 0.00 37.82 3.41
6685 8044 1.398390 GCCCTTGTCGCTAACATTCTG 59.602 52.381 0.00 0.00 37.82 3.02
6686 8045 1.739067 GCCCTTGTCGCTAACATTCT 58.261 50.000 0.00 0.00 37.82 2.40
6687 8046 0.373716 CGCCCTTGTCGCTAACATTC 59.626 55.000 0.00 0.00 37.82 2.67
6688 8047 0.036765 TCGCCCTTGTCGCTAACATT 60.037 50.000 0.00 0.00 37.82 2.71
6689 8048 0.460284 CTCGCCCTTGTCGCTAACAT 60.460 55.000 0.00 0.00 37.82 2.71
6690 8049 1.080093 CTCGCCCTTGTCGCTAACA 60.080 57.895 0.00 0.00 35.59 2.41
6691 8050 2.453638 GCTCGCCCTTGTCGCTAAC 61.454 63.158 0.00 0.00 0.00 2.34
6692 8051 2.125673 GCTCGCCCTTGTCGCTAA 60.126 61.111 0.00 0.00 0.00 3.09
6693 8052 4.492160 CGCTCGCCCTTGTCGCTA 62.492 66.667 0.00 0.00 0.00 4.26
6704 8063 2.130073 AACCTCTTTTTGGCGCTCGC 62.130 55.000 7.64 5.60 41.06 5.03
6705 8064 0.110192 GAACCTCTTTTTGGCGCTCG 60.110 55.000 7.64 0.00 0.00 5.03
6706 8065 0.951558 TGAACCTCTTTTTGGCGCTC 59.048 50.000 7.64 0.00 0.00 5.03
6707 8066 1.398692 TTGAACCTCTTTTTGGCGCT 58.601 45.000 7.64 0.00 0.00 5.92
6708 8067 1.858458 GTTTGAACCTCTTTTTGGCGC 59.142 47.619 0.00 0.00 0.00 6.53
6709 8068 2.469826 GGTTTGAACCTCTTTTTGGCG 58.530 47.619 5.66 0.00 45.75 5.69
6720 8079 2.951458 CGGCCTTCGGTTTGAACC 59.049 61.111 0.00 2.75 45.76 3.62
6730 8089 3.717294 TCTCTTGGGCCGGCCTTC 61.717 66.667 42.70 28.63 36.10 3.46
6731 8090 4.035102 GTCTCTTGGGCCGGCCTT 62.035 66.667 42.70 0.00 36.10 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.