Multiple sequence alignment - TraesCS6B01G219900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G219900 chr6B 100.000 2862 0 0 1 2862 309803274 309800413 0.000000e+00 5286
1 TraesCS6B01G219900 chr6B 99.138 232 2 0 2631 2862 388348345 388348114 4.410000e-113 418
2 TraesCS6B01G219900 chr6B 99.138 232 2 0 2631 2862 398905634 398905865 4.410000e-113 418
3 TraesCS6B01G219900 chr6B 98.707 232 3 0 2631 2862 333162361 333162592 2.050000e-111 412
4 TraesCS6B01G219900 chr6B 98.283 233 4 0 2630 2862 355984067 355984299 2.650000e-110 409
5 TraesCS6B01G219900 chr6B 98.276 232 4 0 2631 2862 355991042 355991273 9.550000e-110 407
6 TraesCS6B01G219900 chr6B 89.818 275 20 3 609 875 485756601 485756327 2.110000e-91 346
7 TraesCS6B01G219900 chr6D 93.888 1636 100 0 996 2631 262113271 262114906 0.000000e+00 2468
8 TraesCS6B01G219900 chr6D 84.483 522 44 15 3 491 262112682 262113199 5.550000e-132 481
9 TraesCS6B01G219900 chr6D 90.251 359 31 3 131 486 256243296 256242939 1.550000e-127 466
10 TraesCS6B01G219900 chr5D 92.959 1676 115 1 959 2631 107865568 107863893 0.000000e+00 2438
11 TraesCS6B01G219900 chr4D 92.780 1676 118 1 959 2631 396675252 396676927 0.000000e+00 2422
12 TraesCS6B01G219900 chr4D 89.665 358 35 1 131 486 396674868 396675225 3.360000e-124 455
13 TraesCS6B01G219900 chr4D 89.665 358 35 1 131 486 453304855 453304498 3.360000e-124 455
14 TraesCS6B01G219900 chr4D 86.486 111 12 3 10 120 225868106 225868213 5.010000e-23 119
15 TraesCS6B01G219900 chr3A 92.923 1639 115 1 993 2631 425180839 425182476 0.000000e+00 2383
16 TraesCS6B01G219900 chr3A 92.248 1677 126 2 959 2631 309533643 309531967 0.000000e+00 2374
17 TraesCS6B01G219900 chr3A 89.385 358 34 4 131 486 425180411 425180766 5.620000e-122 448
18 TraesCS6B01G219900 chr3A 88.194 144 14 2 3 145 425180254 425180395 4.900000e-38 169
19 TraesCS6B01G219900 chr6A 92.862 1639 117 0 993 2631 291876482 291878120 0.000000e+00 2379
20 TraesCS6B01G219900 chr6A 91.771 1677 133 3 959 2631 491361280 491362955 0.000000e+00 2327
21 TraesCS6B01G219900 chr1A 91.711 1677 134 3 959 2631 312563067 312564742 0.000000e+00 2322
22 TraesCS6B01G219900 chr1A 89.510 143 12 3 5 145 221266646 221266505 8.150000e-41 178
23 TraesCS6B01G219900 chr2A 91.538 1678 135 6 959 2631 313166102 313164427 0.000000e+00 2305
24 TraesCS6B01G219900 chr2A 88.122 362 38 4 134 491 313166485 313166125 2.640000e-115 425
25 TraesCS6B01G219900 chr5A 90.379 343 33 0 144 486 397122679 397122337 4.350000e-123 451
26 TraesCS6B01G219900 chr2D 88.732 355 38 2 131 483 203224872 203224518 1.580000e-117 433
27 TraesCS6B01G219900 chr4B 88.333 360 39 2 129 486 241429754 241430112 2.040000e-116 429
28 TraesCS6B01G219900 chr1B 98.712 233 3 0 2630 2862 683851631 683851399 5.710000e-112 414
29 TraesCS6B01G219900 chr1B 98.276 232 4 0 2631 2862 683844607 683844376 9.550000e-110 407
30 TraesCS6B01G219900 chr2B 98.707 232 2 1 2631 2862 22243926 22243696 7.380000e-111 411
31 TraesCS6B01G219900 chr3B 98.276 232 4 0 2631 2862 565418779 565418548 9.550000e-110 407
32 TraesCS6B01G219900 chr4A 87.037 270 30 4 606 875 630072681 630072945 1.670000e-77 300


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G219900 chr6B 309800413 309803274 2861 True 5286.0 5286 100.000000 1 2862 1 chr6B.!!$R1 2861
1 TraesCS6B01G219900 chr6D 262112682 262114906 2224 False 1474.5 2468 89.185500 3 2631 2 chr6D.!!$F1 2628
2 TraesCS6B01G219900 chr5D 107863893 107865568 1675 True 2438.0 2438 92.959000 959 2631 1 chr5D.!!$R1 1672
3 TraesCS6B01G219900 chr4D 396674868 396676927 2059 False 1438.5 2422 91.222500 131 2631 2 chr4D.!!$F2 2500
4 TraesCS6B01G219900 chr3A 309531967 309533643 1676 True 2374.0 2374 92.248000 959 2631 1 chr3A.!!$R1 1672
5 TraesCS6B01G219900 chr3A 425180254 425182476 2222 False 1000.0 2383 90.167333 3 2631 3 chr3A.!!$F1 2628
6 TraesCS6B01G219900 chr6A 291876482 291878120 1638 False 2379.0 2379 92.862000 993 2631 1 chr6A.!!$F1 1638
7 TraesCS6B01G219900 chr6A 491361280 491362955 1675 False 2327.0 2327 91.771000 959 2631 1 chr6A.!!$F2 1672
8 TraesCS6B01G219900 chr1A 312563067 312564742 1675 False 2322.0 2322 91.711000 959 2631 1 chr1A.!!$F1 1672
9 TraesCS6B01G219900 chr2A 313164427 313166485 2058 True 1365.0 2305 89.830000 134 2631 2 chr2A.!!$R1 2497

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
611 649 0.035534 TGTGATTGGATGTCACGGGG 60.036 55.0 2.32 0.0 46.89 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2469 2523 0.391661 ATCCAAGCAACAGCGTCGAT 60.392 50.0 0.0 0.0 0.0 3.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 69 8.406297 AGATAGAAGTGTTTTGAAAAGGTTGTC 58.594 33.333 0.00 0.00 0.00 3.18
67 70 5.720202 AGAAGTGTTTTGAAAAGGTTGTCC 58.280 37.500 0.00 0.00 0.00 4.02
75 78 3.551846 TGAAAAGGTTGTCCCTCTCAAC 58.448 45.455 0.00 0.00 45.47 3.18
76 79 3.053991 TGAAAAGGTTGTCCCTCTCAACA 60.054 43.478 10.21 0.00 45.47 3.33
236 271 1.613437 CCCACGGACAATTTTTCTGCT 59.387 47.619 0.00 0.00 0.00 4.24
247 282 2.974692 TTTTCTGCTTGGCCCGCTCA 62.975 55.000 14.34 0.42 0.00 4.26
248 283 2.769652 TTTCTGCTTGGCCCGCTCAT 62.770 55.000 14.34 0.00 0.00 2.90
285 320 2.044946 GGCATCGGTCCCTTGCTT 60.045 61.111 9.82 0.00 36.62 3.91
302 337 1.882352 GCTTTTCCTCTTCCTCGGCAA 60.882 52.381 0.00 0.00 0.00 4.52
321 356 2.878406 CAACTCCGTTCAGTGGTTCAAT 59.122 45.455 0.00 0.00 0.00 2.57
322 357 2.494059 ACTCCGTTCAGTGGTTCAATG 58.506 47.619 0.00 0.00 0.00 2.82
326 361 2.350772 CCGTTCAGTGGTTCAATGCTTC 60.351 50.000 0.00 0.00 29.02 3.86
327 363 2.290367 CGTTCAGTGGTTCAATGCTTCA 59.710 45.455 0.00 0.00 29.02 3.02
341 377 1.731720 GCTTCATTGAGAGGCGAAGT 58.268 50.000 0.00 0.00 39.69 3.01
342 378 1.396301 GCTTCATTGAGAGGCGAAGTG 59.604 52.381 0.00 0.00 39.69 3.16
343 379 1.396301 CTTCATTGAGAGGCGAAGTGC 59.604 52.381 0.00 0.00 45.38 4.40
402 438 3.950395 GACTGGCTGGAGCTTATTTGAAT 59.050 43.478 0.00 0.00 41.70 2.57
413 449 6.713903 GGAGCTTATTTGAATCATGGATCTGA 59.286 38.462 0.00 0.00 0.00 3.27
416 452 8.164733 AGCTTATTTGAATCATGGATCTGATCT 58.835 33.333 16.61 0.00 34.79 2.75
423 459 3.660865 TCATGGATCTGATCTGCATTCG 58.339 45.455 16.61 3.59 0.00 3.34
439 475 2.517650 TTCGTTTGGATTTGGCAACC 57.482 45.000 0.00 0.00 0.00 3.77
508 546 2.721274 TGGATTGCGATGTTTTGTGG 57.279 45.000 0.00 0.00 0.00 4.17
515 553 5.378292 TTGCGATGTTTTGTGGCTATTTA 57.622 34.783 0.00 0.00 0.00 1.40
520 558 6.321717 CGATGTTTTGTGGCTATTTACACAT 58.678 36.000 0.00 0.00 45.90 3.21
521 559 7.468441 CGATGTTTTGTGGCTATTTACACATA 58.532 34.615 0.00 0.00 45.90 2.29
522 560 7.639850 CGATGTTTTGTGGCTATTTACACATAG 59.360 37.037 0.00 0.00 45.90 2.23
523 561 7.151999 TGTTTTGTGGCTATTTACACATAGG 57.848 36.000 0.00 0.00 45.90 2.57
524 562 6.151985 TGTTTTGTGGCTATTTACACATAGGG 59.848 38.462 0.00 0.00 45.90 3.53
525 563 5.702065 TTGTGGCTATTTACACATAGGGA 57.298 39.130 0.00 0.00 45.90 4.20
526 564 5.904984 TGTGGCTATTTACACATAGGGAT 57.095 39.130 0.00 0.00 42.20 3.85
527 565 6.260700 TGTGGCTATTTACACATAGGGATT 57.739 37.500 0.00 0.00 42.20 3.01
528 566 6.668645 TGTGGCTATTTACACATAGGGATTT 58.331 36.000 0.00 0.00 42.20 2.17
529 567 6.770785 TGTGGCTATTTACACATAGGGATTTC 59.229 38.462 0.00 0.00 42.20 2.17
530 568 6.998673 GTGGCTATTTACACATAGGGATTTCT 59.001 38.462 0.00 0.00 37.54 2.52
531 569 8.154856 GTGGCTATTTACACATAGGGATTTCTA 58.845 37.037 0.00 0.00 37.54 2.10
532 570 8.154856 TGGCTATTTACACATAGGGATTTCTAC 58.845 37.037 0.00 0.00 0.00 2.59
533 571 7.606839 GGCTATTTACACATAGGGATTTCTACC 59.393 40.741 0.00 0.00 0.00 3.18
534 572 8.376270 GCTATTTACACATAGGGATTTCTACCT 58.624 37.037 0.00 0.00 40.89 3.08
544 582 8.814448 ATAGGGATTTCTACCTATGGAAAGAA 57.186 34.615 2.62 0.00 45.81 2.52
545 583 7.525158 AGGGATTTCTACCTATGGAAAGAAA 57.475 36.000 15.42 15.42 38.54 2.52
546 584 8.119062 AGGGATTTCTACCTATGGAAAGAAAT 57.881 34.615 20.37 20.37 43.79 2.17
552 590 7.807977 TCTACCTATGGAAAGAAATCAATGC 57.192 36.000 0.00 0.00 0.00 3.56
553 591 5.505173 ACCTATGGAAAGAAATCAATGCG 57.495 39.130 0.00 0.00 0.00 4.73
554 592 5.192927 ACCTATGGAAAGAAATCAATGCGA 58.807 37.500 0.00 0.00 0.00 5.10
555 593 5.829924 ACCTATGGAAAGAAATCAATGCGAT 59.170 36.000 0.00 0.00 35.12 4.58
556 594 6.322201 ACCTATGGAAAGAAATCAATGCGATT 59.678 34.615 0.00 0.00 46.70 3.34
572 610 5.574891 TGCGATTTTGGCATTAGTATTGT 57.425 34.783 0.00 0.00 35.04 2.71
573 611 5.960113 TGCGATTTTGGCATTAGTATTGTT 58.040 33.333 0.00 0.00 35.04 2.83
574 612 5.804473 TGCGATTTTGGCATTAGTATTGTTG 59.196 36.000 0.00 0.00 35.04 3.33
575 613 5.231991 GCGATTTTGGCATTAGTATTGTTGG 59.768 40.000 0.00 0.00 0.00 3.77
576 614 6.329496 CGATTTTGGCATTAGTATTGTTGGT 58.671 36.000 0.00 0.00 0.00 3.67
577 615 6.811170 CGATTTTGGCATTAGTATTGTTGGTT 59.189 34.615 0.00 0.00 0.00 3.67
578 616 7.330700 CGATTTTGGCATTAGTATTGTTGGTTT 59.669 33.333 0.00 0.00 0.00 3.27
579 617 8.916628 ATTTTGGCATTAGTATTGTTGGTTTT 57.083 26.923 0.00 0.00 0.00 2.43
580 618 7.954788 TTTGGCATTAGTATTGTTGGTTTTC 57.045 32.000 0.00 0.00 0.00 2.29
581 619 6.909550 TGGCATTAGTATTGTTGGTTTTCT 57.090 33.333 0.00 0.00 0.00 2.52
582 620 6.919721 TGGCATTAGTATTGTTGGTTTTCTC 58.080 36.000 0.00 0.00 0.00 2.87
583 621 6.027749 GGCATTAGTATTGTTGGTTTTCTCG 58.972 40.000 0.00 0.00 0.00 4.04
584 622 6.128117 GGCATTAGTATTGTTGGTTTTCTCGA 60.128 38.462 0.00 0.00 0.00 4.04
585 623 7.415206 GGCATTAGTATTGTTGGTTTTCTCGAT 60.415 37.037 0.00 0.00 0.00 3.59
586 624 7.968405 GCATTAGTATTGTTGGTTTTCTCGATT 59.032 33.333 0.00 0.00 0.00 3.34
589 627 7.057149 AGTATTGTTGGTTTTCTCGATTACG 57.943 36.000 0.00 0.00 41.26 3.18
590 628 4.735662 TTGTTGGTTTTCTCGATTACGG 57.264 40.909 0.00 0.00 40.21 4.02
591 629 3.731089 TGTTGGTTTTCTCGATTACGGT 58.269 40.909 0.00 0.00 40.21 4.83
592 630 4.128643 TGTTGGTTTTCTCGATTACGGTT 58.871 39.130 0.00 0.00 40.21 4.44
593 631 4.024725 TGTTGGTTTTCTCGATTACGGTTG 60.025 41.667 0.00 0.00 40.21 3.77
594 632 3.731089 TGGTTTTCTCGATTACGGTTGT 58.269 40.909 0.00 0.00 40.21 3.32
595 633 3.495377 TGGTTTTCTCGATTACGGTTGTG 59.505 43.478 0.00 0.00 40.21 3.33
596 634 3.742369 GGTTTTCTCGATTACGGTTGTGA 59.258 43.478 0.00 0.00 40.21 3.58
597 635 4.390909 GGTTTTCTCGATTACGGTTGTGAT 59.609 41.667 0.00 0.00 40.21 3.06
598 636 5.106830 GGTTTTCTCGATTACGGTTGTGATT 60.107 40.000 0.00 0.00 40.21 2.57
599 637 5.524511 TTTCTCGATTACGGTTGTGATTG 57.475 39.130 0.00 0.00 40.21 2.67
600 638 3.517602 TCTCGATTACGGTTGTGATTGG 58.482 45.455 0.00 0.00 40.21 3.16
601 639 3.193903 TCTCGATTACGGTTGTGATTGGA 59.806 43.478 0.00 0.00 40.21 3.53
602 640 4.119862 CTCGATTACGGTTGTGATTGGAT 58.880 43.478 0.00 0.00 40.21 3.41
603 641 3.868661 TCGATTACGGTTGTGATTGGATG 59.131 43.478 0.00 0.00 40.21 3.51
604 642 3.621268 CGATTACGGTTGTGATTGGATGT 59.379 43.478 0.00 0.00 35.72 3.06
605 643 4.260212 CGATTACGGTTGTGATTGGATGTC 60.260 45.833 0.00 0.00 35.72 3.06
606 644 2.559698 ACGGTTGTGATTGGATGTCA 57.440 45.000 0.00 0.00 0.00 3.58
607 645 2.151202 ACGGTTGTGATTGGATGTCAC 58.849 47.619 0.00 0.00 44.77 3.67
608 646 1.128507 CGGTTGTGATTGGATGTCACG 59.871 52.381 2.32 0.00 46.89 4.35
609 647 1.468520 GGTTGTGATTGGATGTCACGG 59.531 52.381 2.32 0.00 46.89 4.94
610 648 1.468520 GTTGTGATTGGATGTCACGGG 59.531 52.381 2.32 0.00 46.89 5.28
611 649 0.035534 TGTGATTGGATGTCACGGGG 60.036 55.000 2.32 0.00 46.89 5.73
612 650 1.077787 TGATTGGATGTCACGGGGC 60.078 57.895 0.00 0.00 0.00 5.80
613 651 2.124736 ATTGGATGTCACGGGGCG 60.125 61.111 0.00 0.00 0.00 6.13
614 652 2.587322 GATTGGATGTCACGGGGCGA 62.587 60.000 0.00 0.00 0.00 5.54
615 653 2.593468 ATTGGATGTCACGGGGCGAG 62.593 60.000 0.00 0.00 0.00 5.03
616 654 4.530857 GGATGTCACGGGGCGAGG 62.531 72.222 0.00 0.00 0.00 4.63
635 673 3.715097 GTGGCTGCCTGCTCTCCT 61.715 66.667 21.03 0.00 42.39 3.69
636 674 2.932194 TGGCTGCCTGCTCTCCTT 60.932 61.111 21.03 0.00 42.39 3.36
637 675 2.124778 GGCTGCCTGCTCTCCTTC 60.125 66.667 12.43 0.00 42.39 3.46
638 676 2.124778 GCTGCCTGCTCTCCTTCC 60.125 66.667 0.00 0.00 38.95 3.46
639 677 2.588989 CTGCCTGCTCTCCTTCCC 59.411 66.667 0.00 0.00 0.00 3.97
640 678 3.011517 TGCCTGCTCTCCTTCCCC 61.012 66.667 0.00 0.00 0.00 4.81
641 679 3.803162 GCCTGCTCTCCTTCCCCC 61.803 72.222 0.00 0.00 0.00 5.40
658 696 4.477975 CCGACGTCCTGCCGAGTC 62.478 72.222 10.58 0.00 0.00 3.36
680 718 2.581953 CTCGGCTCGAGCTCAAGC 60.582 66.667 34.46 18.69 46.75 4.01
690 728 2.671070 GCTCAAGCTAGGTGGCCA 59.329 61.111 0.00 0.00 38.21 5.36
691 729 1.746991 GCTCAAGCTAGGTGGCCAC 60.747 63.158 28.57 28.57 38.21 5.01
692 730 1.448540 CTCAAGCTAGGTGGCCACG 60.449 63.158 29.08 16.87 0.00 4.94
693 731 1.888436 CTCAAGCTAGGTGGCCACGA 61.888 60.000 29.08 18.44 0.00 4.35
694 732 1.221840 CAAGCTAGGTGGCCACGAT 59.778 57.895 29.08 21.90 0.00 3.73
695 733 0.811616 CAAGCTAGGTGGCCACGATC 60.812 60.000 29.08 15.88 0.00 3.69
696 734 1.264749 AAGCTAGGTGGCCACGATCA 61.265 55.000 29.08 12.84 0.00 2.92
697 735 1.521681 GCTAGGTGGCCACGATCAC 60.522 63.158 29.08 15.11 0.00 3.06
698 736 1.226974 CTAGGTGGCCACGATCACG 60.227 63.158 29.08 10.40 45.75 4.35
699 737 1.663379 CTAGGTGGCCACGATCACGA 61.663 60.000 29.08 10.48 42.66 4.35
700 738 1.663379 TAGGTGGCCACGATCACGAG 61.663 60.000 29.08 0.00 42.66 4.18
701 739 3.188786 GTGGCCACGATCACGAGC 61.189 66.667 22.49 0.00 42.66 5.03
702 740 3.381983 TGGCCACGATCACGAGCT 61.382 61.111 0.00 0.00 42.66 4.09
703 741 2.887568 GGCCACGATCACGAGCTG 60.888 66.667 0.00 0.00 42.66 4.24
704 742 2.887568 GCCACGATCACGAGCTGG 60.888 66.667 0.00 0.00 42.66 4.85
705 743 2.885113 CCACGATCACGAGCTGGA 59.115 61.111 1.44 0.00 42.66 3.86
706 744 1.226802 CCACGATCACGAGCTGGAG 60.227 63.158 1.44 0.00 42.66 3.86
707 745 1.657751 CCACGATCACGAGCTGGAGA 61.658 60.000 1.44 0.00 42.66 3.71
708 746 0.171231 CACGATCACGAGCTGGAGAA 59.829 55.000 1.44 0.00 42.66 2.87
709 747 0.453793 ACGATCACGAGCTGGAGAAG 59.546 55.000 1.44 1.80 42.66 2.85
710 748 0.248825 CGATCACGAGCTGGAGAAGG 60.249 60.000 1.44 0.00 42.66 3.46
711 749 0.103937 GATCACGAGCTGGAGAAGGG 59.896 60.000 1.44 0.00 0.00 3.95
712 750 1.333636 ATCACGAGCTGGAGAAGGGG 61.334 60.000 1.44 0.00 0.00 4.79
713 751 2.685380 ACGAGCTGGAGAAGGGGG 60.685 66.667 1.44 0.00 0.00 5.40
746 784 3.730761 GTGCAGCGGTGGCAAGAG 61.731 66.667 17.54 0.00 43.91 2.85
747 785 3.939939 TGCAGCGGTGGCAAGAGA 61.940 61.111 17.54 0.00 43.41 3.10
748 786 3.123620 GCAGCGGTGGCAAGAGAG 61.124 66.667 17.54 0.00 43.41 3.20
749 787 2.659016 CAGCGGTGGCAAGAGAGA 59.341 61.111 6.74 0.00 43.41 3.10
750 788 1.447489 CAGCGGTGGCAAGAGAGAG 60.447 63.158 6.74 0.00 43.41 3.20
751 789 1.607756 AGCGGTGGCAAGAGAGAGA 60.608 57.895 0.00 0.00 43.41 3.10
752 790 1.153667 GCGGTGGCAAGAGAGAGAG 60.154 63.158 0.00 0.00 39.62 3.20
753 791 1.515020 CGGTGGCAAGAGAGAGAGG 59.485 63.158 0.00 0.00 0.00 3.69
754 792 0.967887 CGGTGGCAAGAGAGAGAGGA 60.968 60.000 0.00 0.00 0.00 3.71
755 793 0.823460 GGTGGCAAGAGAGAGAGGAG 59.177 60.000 0.00 0.00 0.00 3.69
756 794 0.823460 GTGGCAAGAGAGAGAGGAGG 59.177 60.000 0.00 0.00 0.00 4.30
757 795 0.975040 TGGCAAGAGAGAGAGGAGGC 60.975 60.000 0.00 0.00 0.00 4.70
758 796 1.437160 GCAAGAGAGAGAGGAGGCG 59.563 63.158 0.00 0.00 0.00 5.52
759 797 2.015227 GCAAGAGAGAGAGGAGGCGG 62.015 65.000 0.00 0.00 0.00 6.13
760 798 0.395036 CAAGAGAGAGAGGAGGCGGA 60.395 60.000 0.00 0.00 0.00 5.54
761 799 0.555769 AAGAGAGAGAGGAGGCGGAT 59.444 55.000 0.00 0.00 0.00 4.18
762 800 0.178992 AGAGAGAGAGGAGGCGGATG 60.179 60.000 0.00 0.00 0.00 3.51
763 801 0.179004 GAGAGAGAGGAGGCGGATGA 60.179 60.000 0.00 0.00 0.00 2.92
764 802 0.178992 AGAGAGAGGAGGCGGATGAG 60.179 60.000 0.00 0.00 0.00 2.90
765 803 1.152567 AGAGAGGAGGCGGATGAGG 60.153 63.158 0.00 0.00 0.00 3.86
766 804 2.841988 AGAGGAGGCGGATGAGGC 60.842 66.667 0.00 0.00 0.00 4.70
794 832 4.154347 GCGGCAGGAGAGGAGGTG 62.154 72.222 0.00 0.00 0.00 4.00
795 833 3.465403 CGGCAGGAGAGGAGGTGG 61.465 72.222 0.00 0.00 0.00 4.61
796 834 3.791586 GGCAGGAGAGGAGGTGGC 61.792 72.222 0.00 0.00 0.00 5.01
797 835 2.686835 GCAGGAGAGGAGGTGGCT 60.687 66.667 0.00 0.00 0.00 4.75
798 836 3.028921 GCAGGAGAGGAGGTGGCTG 62.029 68.421 0.00 0.00 0.00 4.85
799 837 2.686835 AGGAGAGGAGGTGGCTGC 60.687 66.667 0.00 0.00 0.00 5.25
800 838 4.154347 GGAGAGGAGGTGGCTGCG 62.154 72.222 0.00 0.00 0.00 5.18
801 839 3.071206 GAGAGGAGGTGGCTGCGA 61.071 66.667 0.00 0.00 0.00 5.10
802 840 3.073735 AGAGGAGGTGGCTGCGAG 61.074 66.667 0.00 0.00 0.00 5.03
803 841 4.154347 GAGGAGGTGGCTGCGAGG 62.154 72.222 0.00 0.00 0.00 4.63
828 866 2.493030 CACGGGCGGTGGTAGTAG 59.507 66.667 16.62 0.00 43.16 2.57
829 867 2.048023 CACGGGCGGTGGTAGTAGA 61.048 63.158 16.62 0.00 43.16 2.59
830 868 1.751927 ACGGGCGGTGGTAGTAGAG 60.752 63.158 0.00 0.00 0.00 2.43
831 869 2.487532 CGGGCGGTGGTAGTAGAGG 61.488 68.421 0.00 0.00 0.00 3.69
832 870 1.076485 GGGCGGTGGTAGTAGAGGA 60.076 63.158 0.00 0.00 0.00 3.71
833 871 1.108132 GGGCGGTGGTAGTAGAGGAG 61.108 65.000 0.00 0.00 0.00 3.69
834 872 1.108132 GGCGGTGGTAGTAGAGGAGG 61.108 65.000 0.00 0.00 0.00 4.30
835 873 1.736365 GCGGTGGTAGTAGAGGAGGC 61.736 65.000 0.00 0.00 0.00 4.70
836 874 1.445716 CGGTGGTAGTAGAGGAGGCG 61.446 65.000 0.00 0.00 0.00 5.52
837 875 1.108132 GGTGGTAGTAGAGGAGGCGG 61.108 65.000 0.00 0.00 0.00 6.13
838 876 0.106819 GTGGTAGTAGAGGAGGCGGA 60.107 60.000 0.00 0.00 0.00 5.54
839 877 0.106819 TGGTAGTAGAGGAGGCGGAC 60.107 60.000 0.00 0.00 0.00 4.79
840 878 1.165284 GGTAGTAGAGGAGGCGGACG 61.165 65.000 0.00 0.00 0.00 4.79
841 879 0.179062 GTAGTAGAGGAGGCGGACGA 60.179 60.000 0.00 0.00 0.00 4.20
842 880 0.106335 TAGTAGAGGAGGCGGACGAG 59.894 60.000 0.00 0.00 0.00 4.18
843 881 2.188161 GTAGAGGAGGCGGACGAGG 61.188 68.421 0.00 0.00 0.00 4.63
872 910 4.200283 GCGGCGACAGGAGAGGAG 62.200 72.222 12.98 0.00 0.00 3.69
873 911 3.522731 CGGCGACAGGAGAGGAGG 61.523 72.222 0.00 0.00 0.00 4.30
874 912 3.844090 GGCGACAGGAGAGGAGGC 61.844 72.222 0.00 0.00 0.00 4.70
875 913 3.071206 GCGACAGGAGAGGAGGCA 61.071 66.667 0.00 0.00 0.00 4.75
876 914 2.650116 GCGACAGGAGAGGAGGCAA 61.650 63.158 0.00 0.00 0.00 4.52
877 915 1.965754 GCGACAGGAGAGGAGGCAAT 61.966 60.000 0.00 0.00 0.00 3.56
878 916 0.179089 CGACAGGAGAGGAGGCAATG 60.179 60.000 0.00 0.00 0.00 2.82
879 917 0.908198 GACAGGAGAGGAGGCAATGT 59.092 55.000 0.00 0.00 0.00 2.71
880 918 1.280421 GACAGGAGAGGAGGCAATGTT 59.720 52.381 0.00 0.00 0.00 2.71
881 919 1.707427 ACAGGAGAGGAGGCAATGTTT 59.293 47.619 0.00 0.00 0.00 2.83
882 920 2.108952 ACAGGAGAGGAGGCAATGTTTT 59.891 45.455 0.00 0.00 0.00 2.43
883 921 3.160269 CAGGAGAGGAGGCAATGTTTTT 58.840 45.455 0.00 0.00 0.00 1.94
903 941 2.543777 TTATTATCCACCGCCTCTGC 57.456 50.000 0.00 0.00 0.00 4.26
904 942 1.717032 TATTATCCACCGCCTCTGCT 58.283 50.000 0.00 0.00 34.43 4.24
905 943 0.107456 ATTATCCACCGCCTCTGCTG 59.893 55.000 0.00 0.00 34.43 4.41
906 944 0.975556 TTATCCACCGCCTCTGCTGA 60.976 55.000 0.00 0.00 34.43 4.26
907 945 0.760567 TATCCACCGCCTCTGCTGAT 60.761 55.000 0.00 0.00 34.43 2.90
908 946 2.321263 ATCCACCGCCTCTGCTGATG 62.321 60.000 0.00 0.00 34.43 3.07
909 947 2.513204 CACCGCCTCTGCTGATGG 60.513 66.667 0.00 0.00 34.43 3.51
910 948 2.685017 ACCGCCTCTGCTGATGGA 60.685 61.111 11.83 0.00 34.43 3.41
911 949 2.068821 ACCGCCTCTGCTGATGGAT 61.069 57.895 11.83 0.00 34.43 3.41
912 950 0.760567 ACCGCCTCTGCTGATGGATA 60.761 55.000 11.83 0.00 34.43 2.59
913 951 0.320247 CCGCCTCTGCTGATGGATAC 60.320 60.000 11.47 0.00 34.43 2.24
914 952 0.665670 CGCCTCTGCTGATGGATACG 60.666 60.000 11.47 4.29 35.01 3.06
915 953 0.390860 GCCTCTGCTGATGGATACGT 59.609 55.000 11.47 0.00 34.40 3.57
916 954 1.871408 GCCTCTGCTGATGGATACGTG 60.871 57.143 0.00 0.00 34.40 4.49
917 955 1.410517 CCTCTGCTGATGGATACGTGT 59.589 52.381 0.00 0.00 42.51 4.49
918 956 2.159043 CCTCTGCTGATGGATACGTGTT 60.159 50.000 0.00 0.00 42.51 3.32
919 957 3.119291 CTCTGCTGATGGATACGTGTTC 58.881 50.000 0.00 0.00 42.51 3.18
920 958 2.760650 TCTGCTGATGGATACGTGTTCT 59.239 45.455 0.00 0.00 42.51 3.01
921 959 3.195610 TCTGCTGATGGATACGTGTTCTT 59.804 43.478 0.00 0.00 42.51 2.52
922 960 3.521560 TGCTGATGGATACGTGTTCTTC 58.478 45.455 0.00 0.00 42.51 2.87
923 961 2.866762 GCTGATGGATACGTGTTCTTCC 59.133 50.000 0.00 0.00 42.51 3.46
924 962 3.678806 GCTGATGGATACGTGTTCTTCCA 60.679 47.826 0.00 3.39 42.18 3.53
925 963 4.115516 CTGATGGATACGTGTTCTTCCAG 58.884 47.826 0.00 0.00 41.33 3.86
926 964 3.767131 TGATGGATACGTGTTCTTCCAGA 59.233 43.478 0.00 0.00 41.33 3.86
927 965 4.405680 TGATGGATACGTGTTCTTCCAGAT 59.594 41.667 0.00 0.00 41.33 2.90
928 966 4.386867 TGGATACGTGTTCTTCCAGATC 57.613 45.455 0.00 0.00 42.51 2.75
929 967 4.023980 TGGATACGTGTTCTTCCAGATCT 58.976 43.478 0.00 0.00 42.51 2.75
930 968 5.198207 TGGATACGTGTTCTTCCAGATCTA 58.802 41.667 0.00 0.00 42.51 1.98
931 969 5.833667 TGGATACGTGTTCTTCCAGATCTAT 59.166 40.000 0.00 0.00 42.51 1.98
932 970 7.002276 TGGATACGTGTTCTTCCAGATCTATA 58.998 38.462 0.00 0.00 42.51 1.31
933 971 7.040617 TGGATACGTGTTCTTCCAGATCTATAC 60.041 40.741 0.00 0.00 42.51 1.47
934 972 5.171147 ACGTGTTCTTCCAGATCTATACG 57.829 43.478 8.19 8.19 0.00 3.06
935 973 4.639310 ACGTGTTCTTCCAGATCTATACGT 59.361 41.667 9.27 9.27 36.39 3.57
936 974 5.125097 ACGTGTTCTTCCAGATCTATACGTT 59.875 40.000 9.27 0.00 37.73 3.99
937 975 5.455849 CGTGTTCTTCCAGATCTATACGTTG 59.544 44.000 0.00 0.00 0.00 4.10
938 976 6.331061 GTGTTCTTCCAGATCTATACGTTGT 58.669 40.000 0.00 0.00 0.00 3.32
939 977 6.253727 GTGTTCTTCCAGATCTATACGTTGTG 59.746 42.308 0.00 0.00 0.00 3.33
940 978 6.152154 TGTTCTTCCAGATCTATACGTTGTGA 59.848 38.462 0.00 0.00 0.00 3.58
941 979 6.961360 TCTTCCAGATCTATACGTTGTGAT 57.039 37.500 0.00 0.00 0.00 3.06
942 980 8.350722 GTTCTTCCAGATCTATACGTTGTGATA 58.649 37.037 0.00 0.00 0.00 2.15
943 981 8.100508 TCTTCCAGATCTATACGTTGTGATAG 57.899 38.462 0.00 0.00 0.00 2.08
944 982 6.255596 TCCAGATCTATACGTTGTGATAGC 57.744 41.667 0.00 0.00 0.00 2.97
945 983 5.768164 TCCAGATCTATACGTTGTGATAGCA 59.232 40.000 0.00 0.00 0.00 3.49
946 984 6.434340 TCCAGATCTATACGTTGTGATAGCAT 59.566 38.462 0.00 0.00 0.00 3.79
947 985 7.039714 TCCAGATCTATACGTTGTGATAGCATT 60.040 37.037 0.00 0.00 0.00 3.56
948 986 7.062722 CCAGATCTATACGTTGTGATAGCATTG 59.937 40.741 0.00 0.00 0.00 2.82
949 987 7.596621 CAGATCTATACGTTGTGATAGCATTGT 59.403 37.037 0.00 0.00 0.00 2.71
950 988 7.596621 AGATCTATACGTTGTGATAGCATTGTG 59.403 37.037 0.00 0.00 0.00 3.33
951 989 2.900122 ACGTTGTGATAGCATTGTGC 57.100 45.000 0.00 0.00 45.46 4.57
965 1003 3.855950 GCATTGTGCTCTGATTAGTTTGC 59.144 43.478 0.00 0.00 40.96 3.68
968 1006 0.721154 TGCTCTGATTAGTTTGCGCG 59.279 50.000 0.00 0.00 0.00 6.86
971 1009 1.324736 CTCTGATTAGTTTGCGCGGAC 59.675 52.381 8.83 3.52 0.00 4.79
990 1028 5.691754 GCGGACTGAAAATCTTTGATGTTTT 59.308 36.000 0.00 0.00 0.00 2.43
1016 1066 1.596477 GCATGAGGGGAGATCGCAC 60.596 63.158 0.00 0.00 0.00 5.34
1073 1123 2.609984 CGGATAGCAGCTCTGATGAAGG 60.610 54.545 0.00 0.00 0.00 3.46
1077 1127 2.744760 AGCAGCTCTGATGAAGGTCTA 58.255 47.619 0.29 0.00 0.00 2.59
1078 1128 2.430332 AGCAGCTCTGATGAAGGTCTAC 59.570 50.000 0.29 0.00 0.00 2.59
1154 1204 1.068832 TCTGATGAACGCGCGTACAC 61.069 55.000 37.93 28.01 0.00 2.90
1173 1223 0.879400 CCAGCTCTGATGATGGCGTC 60.879 60.000 0.00 0.00 36.67 5.19
1228 1278 7.876936 AATGCTAATCATCAGACATTTGACT 57.123 32.000 0.00 0.00 33.40 3.41
1247 1297 9.874205 ATTTGACTTAATAAAATGTGGTCATGG 57.126 29.630 0.00 0.00 34.19 3.66
1307 1358 6.488344 TGTTTGTTGAACTATTGAGGCATGTA 59.512 34.615 0.00 0.00 39.08 2.29
1354 1405 3.008266 TCAGAAGACATGCAAGGATGTGA 59.992 43.478 12.01 0.33 36.67 3.58
1407 1458 8.594550 GGTAAGGACTAATGCTAGATAATCCAA 58.405 37.037 0.00 0.00 0.00 3.53
1490 1541 0.391661 TTCTGAAGCCGACTGGATGC 60.392 55.000 0.00 0.00 37.49 3.91
1553 1604 6.980978 GCATCTTAGTTGCTATGTCTGTTCTA 59.019 38.462 7.92 0.00 37.14 2.10
1603 1654 6.821160 TGTGTGAGATGAACAAGACTTTTACA 59.179 34.615 0.00 0.00 0.00 2.41
1675 1727 8.715998 GTGTATTTGCCTACTCTATCAATCATG 58.284 37.037 0.00 0.00 0.00 3.07
1790 1842 5.403897 TCGAATGCGGATTAATCTTTCAC 57.596 39.130 14.95 0.00 38.28 3.18
1806 1858 2.279935 TCACCTGGGCGTTGTTTAAT 57.720 45.000 0.00 0.00 0.00 1.40
1817 1869 5.007332 GGGCGTTGTTTAATCTATGTTCGAT 59.993 40.000 0.00 0.00 0.00 3.59
1837 1889 4.615912 CGATTGATGAAAGGGGTTGACAAC 60.616 45.833 9.97 9.97 0.00 3.32
1914 1966 9.462606 GAAAGAAGGGGAAATCTATGTCTTTTA 57.537 33.333 0.00 0.00 34.97 1.52
2083 2135 2.095461 GTTTGGAAGGAGGAAGATGGC 58.905 52.381 0.00 0.00 0.00 4.40
2090 2142 1.034292 GGAGGAAGATGGCAAGGTGC 61.034 60.000 0.00 0.00 44.08 5.01
2092 2144 0.407139 AGGAAGATGGCAAGGTGCTT 59.593 50.000 0.00 0.00 44.28 3.91
2189 2241 0.250338 GGTCAGGTCTGTTGGGTCAC 60.250 60.000 0.00 0.00 0.00 3.67
2229 2282 8.871629 TTTTCTTTTGGCACTAATGTATCCTA 57.128 30.769 0.00 0.00 0.00 2.94
2256 2309 6.168389 TGCTATCTATGTAATGCACTGATGG 58.832 40.000 0.00 0.00 0.00 3.51
2323 2376 8.970691 ACATTGTAATTATGTTTGTCTGAAGC 57.029 30.769 0.00 0.00 32.48 3.86
2326 2379 8.795786 TTGTAATTATGTTTGTCTGAAGCAAC 57.204 30.769 0.00 0.00 0.00 4.17
2380 2434 9.056005 GTCAGTACATGGCATTTCATAAGATAA 57.944 33.333 0.00 0.00 32.08 1.75
2381 2435 9.797642 TCAGTACATGGCATTTCATAAGATAAT 57.202 29.630 0.00 0.00 0.00 1.28
2400 2454 7.777095 AGATAATATTAAAGTTTTGGCCGCAA 58.223 30.769 0.00 0.00 0.00 4.85
2469 2523 6.054860 AGCTAGCTTTCAAAAGTATCCTGA 57.945 37.500 12.68 0.00 38.28 3.86
2476 2530 3.444916 TCAAAAGTATCCTGATCGACGC 58.555 45.455 0.00 0.00 0.00 5.19
2492 2546 2.095853 CGACGCTGTTGCTTGGATTTAT 59.904 45.455 0.00 0.00 36.97 1.40
2520 2574 1.852067 GCCATGGTCGAACAACGCTT 61.852 55.000 7.51 0.00 42.26 4.68
2542 2596 4.654091 TCTTTGCACTTCTTTTTCCAGG 57.346 40.909 0.00 0.00 0.00 4.45
2580 2634 3.447742 CTTTGTTGGTTGGTCAAAGAGC 58.552 45.455 10.17 0.00 45.96 4.09
2596 2650 8.897752 GGTCAAAGAGCAAGATAGTTGATTTAT 58.102 33.333 0.00 0.00 0.00 1.40
2631 2685 7.924412 TCTTGTGAGTGTTTTACCTAGTAGTTG 59.076 37.037 0.00 0.00 0.00 3.16
2632 2686 7.116075 TGTGAGTGTTTTACCTAGTAGTTGT 57.884 36.000 0.00 0.00 0.00 3.32
2633 2687 7.558604 TGTGAGTGTTTTACCTAGTAGTTGTT 58.441 34.615 0.00 0.00 0.00 2.83
2634 2688 7.493320 TGTGAGTGTTTTACCTAGTAGTTGTTG 59.507 37.037 0.00 0.00 0.00 3.33
2635 2689 6.987992 TGAGTGTTTTACCTAGTAGTTGTTGG 59.012 38.462 0.00 0.00 0.00 3.77
2636 2690 7.128234 AGTGTTTTACCTAGTAGTTGTTGGA 57.872 36.000 0.00 0.00 0.00 3.53
2637 2691 7.567458 AGTGTTTTACCTAGTAGTTGTTGGAA 58.433 34.615 0.00 0.00 0.00 3.53
2638 2692 8.048514 AGTGTTTTACCTAGTAGTTGTTGGAAA 58.951 33.333 0.00 0.00 0.00 3.13
2639 2693 8.843262 GTGTTTTACCTAGTAGTTGTTGGAAAT 58.157 33.333 0.00 0.00 0.00 2.17
2643 2697 8.726870 TTACCTAGTAGTTGTTGGAAATATGC 57.273 34.615 0.00 0.00 0.00 3.14
2644 2698 6.120220 ACCTAGTAGTTGTTGGAAATATGCC 58.880 40.000 0.00 0.00 0.00 4.40
2645 2699 5.531287 CCTAGTAGTTGTTGGAAATATGCCC 59.469 44.000 0.00 0.00 0.00 5.36
2646 2700 5.193099 AGTAGTTGTTGGAAATATGCCCT 57.807 39.130 0.00 0.00 0.00 5.19
2647 2701 6.321821 AGTAGTTGTTGGAAATATGCCCTA 57.678 37.500 0.00 0.00 0.00 3.53
2648 2702 6.357367 AGTAGTTGTTGGAAATATGCCCTAG 58.643 40.000 0.00 0.00 0.00 3.02
2649 2703 5.450818 AGTTGTTGGAAATATGCCCTAGA 57.549 39.130 0.00 0.00 0.00 2.43
2650 2704 5.440610 AGTTGTTGGAAATATGCCCTAGAG 58.559 41.667 0.00 0.00 0.00 2.43
2651 2705 4.437682 TGTTGGAAATATGCCCTAGAGG 57.562 45.455 0.00 0.00 39.47 3.69
2669 2723 9.981460 CCCTAGAGGCAATAATAAAAGGATTAT 57.019 33.333 0.00 0.00 34.18 1.28
2706 2760 9.956720 CCTTGTTCATGATAATTGTCTTTATCC 57.043 33.333 0.00 0.00 37.65 2.59
2710 2764 9.403110 GTTCATGATAATTGTCTTTATCCATGC 57.597 33.333 0.00 0.00 37.65 4.06
2711 2765 8.929260 TCATGATAATTGTCTTTATCCATGCT 57.071 30.769 3.72 0.00 37.65 3.79
2719 2773 9.632638 AATTGTCTTTATCCATGCTATAACTGT 57.367 29.630 0.00 0.00 0.00 3.55
2728 2782 6.873997 TCCATGCTATAACTGTATTATCCGG 58.126 40.000 0.00 0.00 0.00 5.14
2729 2783 6.666113 TCCATGCTATAACTGTATTATCCGGA 59.334 38.462 6.61 6.61 0.00 5.14
2730 2784 7.179516 TCCATGCTATAACTGTATTATCCGGAA 59.820 37.037 9.01 0.00 0.00 4.30
2731 2785 7.822334 CCATGCTATAACTGTATTATCCGGAAA 59.178 37.037 9.01 4.74 0.00 3.13
2732 2786 9.383519 CATGCTATAACTGTATTATCCGGAAAT 57.616 33.333 9.01 12.31 0.00 2.17
2733 2787 8.997621 TGCTATAACTGTATTATCCGGAAATC 57.002 34.615 9.01 5.33 0.00 2.17
2734 2788 7.758076 TGCTATAACTGTATTATCCGGAAATCG 59.242 37.037 9.01 5.25 38.88 3.34
2735 2789 7.758528 GCTATAACTGTATTATCCGGAAATCGT 59.241 37.037 9.01 5.81 37.11 3.73
2740 2794 8.976986 ACTGTATTATCCGGAAATCGTAATAC 57.023 34.615 25.06 25.06 40.20 1.89
2741 2795 8.579006 ACTGTATTATCCGGAAATCGTAATACA 58.421 33.333 28.89 28.89 43.27 2.29
2742 2796 8.746922 TGTATTATCCGGAAATCGTAATACAC 57.253 34.615 28.04 16.29 42.13 2.90
2758 2812 7.979037 CGTAATACACGTGTGAATACATAGAC 58.021 38.462 30.83 14.41 45.82 2.59
2759 2813 7.112565 CGTAATACACGTGTGAATACATAGACC 59.887 40.741 30.83 6.57 45.82 3.85
2760 2814 4.794278 ACACGTGTGAATACATAGACCA 57.206 40.909 22.71 0.00 39.39 4.02
2761 2815 5.339008 ACACGTGTGAATACATAGACCAT 57.661 39.130 22.71 0.00 39.39 3.55
2762 2816 6.459670 ACACGTGTGAATACATAGACCATA 57.540 37.500 22.71 0.00 39.39 2.74
2763 2817 6.869695 ACACGTGTGAATACATAGACCATAA 58.130 36.000 22.71 0.00 39.39 1.90
2764 2818 7.497595 ACACGTGTGAATACATAGACCATAAT 58.502 34.615 22.71 0.00 39.39 1.28
2765 2819 8.635328 ACACGTGTGAATACATAGACCATAATA 58.365 33.333 22.71 0.00 39.39 0.98
2766 2820 9.639601 CACGTGTGAATACATAGACCATAATAT 57.360 33.333 7.58 0.00 39.39 1.28
2767 2821 9.639601 ACGTGTGAATACATAGACCATAATATG 57.360 33.333 0.00 0.00 39.39 1.78
2768 2822 9.639601 CGTGTGAATACATAGACCATAATATGT 57.360 33.333 0.00 3.60 43.31 2.29
2771 2825 9.601217 GTGAATACATAGACCATAATATGTCCC 57.399 37.037 1.37 0.00 40.78 4.46
2772 2826 9.560860 TGAATACATAGACCATAATATGTCCCT 57.439 33.333 1.37 0.00 40.78 4.20
2779 2833 7.483580 AGACCATAATATGTCCCTAGTAAGC 57.516 40.000 0.00 0.00 0.00 3.09
2780 2834 6.440965 AGACCATAATATGTCCCTAGTAAGCC 59.559 42.308 0.00 0.00 0.00 4.35
2781 2835 6.331846 ACCATAATATGTCCCTAGTAAGCCT 58.668 40.000 0.00 0.00 0.00 4.58
2782 2836 6.440965 ACCATAATATGTCCCTAGTAAGCCTC 59.559 42.308 0.00 0.00 0.00 4.70
2783 2837 6.670027 CCATAATATGTCCCTAGTAAGCCTCT 59.330 42.308 0.00 0.00 0.00 3.69
2784 2838 7.839705 CCATAATATGTCCCTAGTAAGCCTCTA 59.160 40.741 0.00 0.00 0.00 2.43
2785 2839 8.908903 CATAATATGTCCCTAGTAAGCCTCTAG 58.091 40.741 0.00 0.00 35.86 2.43
2786 2840 4.817874 ATGTCCCTAGTAAGCCTCTAGT 57.182 45.455 0.00 0.00 34.72 2.57
2787 2841 4.604784 TGTCCCTAGTAAGCCTCTAGTT 57.395 45.455 0.00 0.00 34.72 2.24
2788 2842 4.279145 TGTCCCTAGTAAGCCTCTAGTTG 58.721 47.826 0.00 0.00 34.72 3.16
2789 2843 4.017775 TGTCCCTAGTAAGCCTCTAGTTGA 60.018 45.833 0.00 1.98 34.72 3.18
2790 2844 4.338964 GTCCCTAGTAAGCCTCTAGTTGAC 59.661 50.000 0.00 8.18 34.72 3.18
2791 2845 4.230041 TCCCTAGTAAGCCTCTAGTTGACT 59.770 45.833 0.00 0.00 34.72 3.41
2792 2846 5.431073 TCCCTAGTAAGCCTCTAGTTGACTA 59.569 44.000 0.00 0.00 34.72 2.59
2793 2847 5.766174 CCCTAGTAAGCCTCTAGTTGACTAG 59.234 48.000 11.14 11.14 45.57 2.57
2794 2848 5.239963 CCTAGTAAGCCTCTAGTTGACTAGC 59.760 48.000 12.30 3.61 44.24 3.42
2795 2849 4.862371 AGTAAGCCTCTAGTTGACTAGCT 58.138 43.478 12.30 5.64 44.24 3.32
2796 2850 5.265989 AGTAAGCCTCTAGTTGACTAGCTT 58.734 41.667 15.78 15.78 44.24 3.74
2797 2851 4.464069 AAGCCTCTAGTTGACTAGCTTG 57.536 45.455 12.30 0.00 44.24 4.01
2798 2852 3.436243 AGCCTCTAGTTGACTAGCTTGT 58.564 45.455 12.30 0.00 44.24 3.16
2799 2853 3.835395 AGCCTCTAGTTGACTAGCTTGTT 59.165 43.478 12.30 0.82 44.24 2.83
2800 2854 3.929610 GCCTCTAGTTGACTAGCTTGTTG 59.070 47.826 12.30 0.75 44.24 3.33
2801 2855 4.322049 GCCTCTAGTTGACTAGCTTGTTGA 60.322 45.833 12.30 0.00 44.24 3.18
2802 2856 5.625656 GCCTCTAGTTGACTAGCTTGTTGAT 60.626 44.000 12.30 0.00 44.24 2.57
2803 2857 6.039616 CCTCTAGTTGACTAGCTTGTTGATC 58.960 44.000 12.30 0.00 44.24 2.92
2804 2858 6.350528 CCTCTAGTTGACTAGCTTGTTGATCA 60.351 42.308 12.30 0.00 44.24 2.92
2805 2859 6.993079 TCTAGTTGACTAGCTTGTTGATCAA 58.007 36.000 3.38 3.38 44.24 2.57
2806 2860 5.931441 AGTTGACTAGCTTGTTGATCAAC 57.069 39.130 28.10 28.10 43.94 3.18
2807 2861 6.646653 CTAGTTGACTAGCTTGTTGATCAACA 59.353 38.462 32.36 32.36 45.30 3.33
2808 2862 7.148672 CTAGTTGACTAGCTTGTTGATCAACAG 60.149 40.741 33.31 27.50 45.30 3.16
2819 2873 6.053632 TGTTGATCAACAGATAGTCATGGT 57.946 37.500 32.36 0.00 45.42 3.55
2820 2874 6.475504 TGTTGATCAACAGATAGTCATGGTT 58.524 36.000 32.36 0.00 45.42 3.67
2821 2875 6.942005 TGTTGATCAACAGATAGTCATGGTTT 59.058 34.615 32.36 0.00 45.42 3.27
2822 2876 7.119699 TGTTGATCAACAGATAGTCATGGTTTC 59.880 37.037 32.36 5.28 45.42 2.78
2823 2877 6.115446 TGATCAACAGATAGTCATGGTTTCC 58.885 40.000 0.00 0.00 0.00 3.13
2824 2878 5.762179 TCAACAGATAGTCATGGTTTCCT 57.238 39.130 0.00 0.00 0.00 3.36
2825 2879 5.491070 TCAACAGATAGTCATGGTTTCCTG 58.509 41.667 0.00 0.00 0.00 3.86
2826 2880 5.248248 TCAACAGATAGTCATGGTTTCCTGA 59.752 40.000 10.65 0.00 0.00 3.86
2827 2881 5.091261 ACAGATAGTCATGGTTTCCTGAC 57.909 43.478 10.65 8.96 41.65 3.51
2833 2887 4.487714 GTCATGGTTTCCTGACTATGGA 57.512 45.455 0.00 0.00 38.56 3.41
2834 2888 4.192317 GTCATGGTTTCCTGACTATGGAC 58.808 47.826 0.00 0.00 38.56 4.02
2835 2889 3.843619 TCATGGTTTCCTGACTATGGACA 59.156 43.478 0.00 0.00 38.56 4.02
2836 2890 4.474651 TCATGGTTTCCTGACTATGGACAT 59.525 41.667 0.00 0.00 38.56 3.06
2837 2891 4.487714 TGGTTTCCTGACTATGGACATC 57.512 45.455 0.00 0.00 32.65 3.06
2838 2892 3.843619 TGGTTTCCTGACTATGGACATCA 59.156 43.478 0.00 0.00 32.65 3.07
2839 2893 4.080919 TGGTTTCCTGACTATGGACATCAG 60.081 45.833 0.00 0.00 39.70 2.90
2840 2894 4.162320 GGTTTCCTGACTATGGACATCAGA 59.838 45.833 2.08 0.00 42.07 3.27
2841 2895 5.163258 GGTTTCCTGACTATGGACATCAGAT 60.163 44.000 2.08 0.00 42.07 2.90
2842 2896 5.541953 TTCCTGACTATGGACATCAGATG 57.458 43.478 9.03 9.03 42.07 2.90
2856 2910 5.111989 ACATCAGATGTCGTTGATAACAGG 58.888 41.667 10.53 0.00 39.92 4.00
2857 2911 5.105351 ACATCAGATGTCGTTGATAACAGGA 60.105 40.000 10.53 0.00 39.92 3.86
2858 2912 4.744570 TCAGATGTCGTTGATAACAGGAC 58.255 43.478 0.00 0.00 34.32 3.85
2859 2913 3.865745 CAGATGTCGTTGATAACAGGACC 59.134 47.826 4.56 0.00 33.46 4.46
2860 2914 3.513912 AGATGTCGTTGATAACAGGACCA 59.486 43.478 0.00 0.00 33.46 4.02
2861 2915 3.034721 TGTCGTTGATAACAGGACCAC 57.965 47.619 0.00 0.00 33.46 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 85 4.769488 TGCCTCAATAATTGTTACAGCCAA 59.231 37.500 0.00 0.00 0.00 4.52
86 89 7.650890 TGCATATGCCTCAATAATTGTTACAG 58.349 34.615 24.54 0.00 41.18 2.74
91 94 6.659745 ACATGCATATGCCTCAATAATTGT 57.340 33.333 24.54 10.72 41.18 2.71
98 101 8.320617 TCTACATAATACATGCATATGCCTCAA 58.679 33.333 24.54 6.57 41.18 3.02
122 125 2.639839 ACAGGCACATACCTTTCAGTCT 59.360 45.455 0.00 0.00 38.26 3.24
178 213 3.119137 GCCAGCCCAGTAAACCTTAAATG 60.119 47.826 0.00 0.00 0.00 2.32
208 243 1.460273 ATTGTCCGTGGGCCAAACAC 61.460 55.000 8.40 5.32 35.55 3.32
236 271 0.326595 TTCTACAATGAGCGGGCCAA 59.673 50.000 4.39 0.00 0.00 4.52
247 282 4.067896 CCTGCCGCTTCATATTCTACAAT 58.932 43.478 0.00 0.00 0.00 2.71
248 283 3.466836 CCTGCCGCTTCATATTCTACAA 58.533 45.455 0.00 0.00 0.00 2.41
280 315 1.882352 GCCGAGGAAGAGGAAAAGCAA 60.882 52.381 0.00 0.00 0.00 3.91
285 320 1.002087 GAGTTGCCGAGGAAGAGGAAA 59.998 52.381 0.00 0.00 0.00 3.13
321 356 1.002430 ACTTCGCCTCTCAATGAAGCA 59.998 47.619 1.03 0.00 41.11 3.91
322 357 1.396301 CACTTCGCCTCTCAATGAAGC 59.604 52.381 1.03 0.00 41.11 3.86
326 361 0.725686 CTGCACTTCGCCTCTCAATG 59.274 55.000 0.00 0.00 41.33 2.82
327 363 1.023513 GCTGCACTTCGCCTCTCAAT 61.024 55.000 0.00 0.00 41.33 2.57
402 438 3.070590 ACGAATGCAGATCAGATCCATGA 59.929 43.478 6.80 0.00 0.00 3.07
413 449 3.676873 GCCAAATCCAAACGAATGCAGAT 60.677 43.478 0.00 0.00 0.00 2.90
416 452 1.342496 TGCCAAATCCAAACGAATGCA 59.658 42.857 0.00 0.00 0.00 3.96
423 459 3.751479 AAGAGGTTGCCAAATCCAAAC 57.249 42.857 0.00 0.00 0.00 2.93
439 475 2.135933 AGTCGGCTGAAAACGAAAGAG 58.864 47.619 0.00 0.00 41.17 2.85
487 525 2.924926 CCACAAAACATCGCAATCCATG 59.075 45.455 0.00 0.00 0.00 3.66
488 526 2.674747 GCCACAAAACATCGCAATCCAT 60.675 45.455 0.00 0.00 0.00 3.41
489 527 1.336702 GCCACAAAACATCGCAATCCA 60.337 47.619 0.00 0.00 0.00 3.41
490 528 1.067635 AGCCACAAAACATCGCAATCC 60.068 47.619 0.00 0.00 0.00 3.01
491 529 2.352503 AGCCACAAAACATCGCAATC 57.647 45.000 0.00 0.00 0.00 2.67
492 530 4.454728 AATAGCCACAAAACATCGCAAT 57.545 36.364 0.00 0.00 0.00 3.56
493 531 3.932545 AATAGCCACAAAACATCGCAA 57.067 38.095 0.00 0.00 0.00 4.85
494 532 3.932545 AAATAGCCACAAAACATCGCA 57.067 38.095 0.00 0.00 0.00 5.10
495 533 4.557301 GTGTAAATAGCCACAAAACATCGC 59.443 41.667 0.00 0.00 0.00 4.58
505 543 6.998673 AGAAATCCCTATGTGTAAATAGCCAC 59.001 38.462 0.00 0.00 0.00 5.01
508 546 8.376270 AGGTAGAAATCCCTATGTGTAAATAGC 58.624 37.037 0.00 0.00 0.00 2.97
520 558 8.632731 TTTCTTTCCATAGGTAGAAATCCCTA 57.367 34.615 10.05 0.00 37.71 3.53
521 559 7.525158 TTTCTTTCCATAGGTAGAAATCCCT 57.475 36.000 10.05 0.00 33.37 4.20
522 560 7.998964 TGATTTCTTTCCATAGGTAGAAATCCC 59.001 37.037 28.34 18.45 46.17 3.85
523 561 8.980481 TGATTTCTTTCCATAGGTAGAAATCC 57.020 34.615 28.34 20.15 46.17 3.01
526 564 8.686334 GCATTGATTTCTTTCCATAGGTAGAAA 58.314 33.333 13.94 13.94 38.08 2.52
527 565 7.012327 CGCATTGATTTCTTTCCATAGGTAGAA 59.988 37.037 0.00 0.00 0.00 2.10
528 566 6.483307 CGCATTGATTTCTTTCCATAGGTAGA 59.517 38.462 0.00 0.00 0.00 2.59
529 567 6.483307 TCGCATTGATTTCTTTCCATAGGTAG 59.517 38.462 0.00 0.00 0.00 3.18
530 568 6.353323 TCGCATTGATTTCTTTCCATAGGTA 58.647 36.000 0.00 0.00 0.00 3.08
531 569 5.192927 TCGCATTGATTTCTTTCCATAGGT 58.807 37.500 0.00 0.00 0.00 3.08
532 570 5.756195 TCGCATTGATTTCTTTCCATAGG 57.244 39.130 0.00 0.00 0.00 2.57
550 588 5.574891 ACAATACTAATGCCAAAATCGCA 57.425 34.783 0.00 0.00 41.28 5.10
551 589 5.231991 CCAACAATACTAATGCCAAAATCGC 59.768 40.000 0.00 0.00 0.00 4.58
552 590 6.329496 ACCAACAATACTAATGCCAAAATCG 58.671 36.000 0.00 0.00 0.00 3.34
553 591 8.546597 AAACCAACAATACTAATGCCAAAATC 57.453 30.769 0.00 0.00 0.00 2.17
554 592 8.916628 AAAACCAACAATACTAATGCCAAAAT 57.083 26.923 0.00 0.00 0.00 1.82
555 593 8.207545 AGAAAACCAACAATACTAATGCCAAAA 58.792 29.630 0.00 0.00 0.00 2.44
556 594 7.731054 AGAAAACCAACAATACTAATGCCAAA 58.269 30.769 0.00 0.00 0.00 3.28
557 595 7.296628 AGAAAACCAACAATACTAATGCCAA 57.703 32.000 0.00 0.00 0.00 4.52
558 596 6.348950 CGAGAAAACCAACAATACTAATGCCA 60.349 38.462 0.00 0.00 0.00 4.92
559 597 6.027749 CGAGAAAACCAACAATACTAATGCC 58.972 40.000 0.00 0.00 0.00 4.40
560 598 6.837992 TCGAGAAAACCAACAATACTAATGC 58.162 36.000 0.00 0.00 0.00 3.56
563 601 8.649841 CGTAATCGAGAAAACCAACAATACTAA 58.350 33.333 0.00 0.00 39.71 2.24
564 602 7.276218 CCGTAATCGAGAAAACCAACAATACTA 59.724 37.037 0.00 0.00 39.71 1.82
565 603 6.091713 CCGTAATCGAGAAAACCAACAATACT 59.908 38.462 0.00 0.00 39.71 2.12
566 604 6.128472 ACCGTAATCGAGAAAACCAACAATAC 60.128 38.462 0.00 0.00 39.71 1.89
567 605 5.933463 ACCGTAATCGAGAAAACCAACAATA 59.067 36.000 0.00 0.00 39.71 1.90
568 606 4.758165 ACCGTAATCGAGAAAACCAACAAT 59.242 37.500 0.00 0.00 39.71 2.71
569 607 4.128643 ACCGTAATCGAGAAAACCAACAA 58.871 39.130 0.00 0.00 39.71 2.83
570 608 3.731089 ACCGTAATCGAGAAAACCAACA 58.269 40.909 0.00 0.00 39.71 3.33
571 609 4.024641 ACAACCGTAATCGAGAAAACCAAC 60.025 41.667 0.00 0.00 39.71 3.77
572 610 4.024725 CACAACCGTAATCGAGAAAACCAA 60.025 41.667 0.00 0.00 39.71 3.67
573 611 3.495377 CACAACCGTAATCGAGAAAACCA 59.505 43.478 0.00 0.00 39.71 3.67
574 612 3.742369 TCACAACCGTAATCGAGAAAACC 59.258 43.478 0.00 0.00 39.71 3.27
575 613 4.977741 TCACAACCGTAATCGAGAAAAC 57.022 40.909 0.00 0.00 39.71 2.43
576 614 5.106869 CCAATCACAACCGTAATCGAGAAAA 60.107 40.000 0.00 0.00 39.71 2.29
577 615 4.390603 CCAATCACAACCGTAATCGAGAAA 59.609 41.667 0.00 0.00 39.71 2.52
578 616 3.930229 CCAATCACAACCGTAATCGAGAA 59.070 43.478 0.00 0.00 39.71 2.87
579 617 3.193903 TCCAATCACAACCGTAATCGAGA 59.806 43.478 0.00 0.00 39.71 4.04
580 618 3.517602 TCCAATCACAACCGTAATCGAG 58.482 45.455 0.00 0.00 39.71 4.04
581 619 3.596310 TCCAATCACAACCGTAATCGA 57.404 42.857 0.00 0.00 39.71 3.59
582 620 3.621268 ACATCCAATCACAACCGTAATCG 59.379 43.478 0.00 0.00 0.00 3.34
583 621 4.634004 TGACATCCAATCACAACCGTAATC 59.366 41.667 0.00 0.00 0.00 1.75
584 622 4.394920 GTGACATCCAATCACAACCGTAAT 59.605 41.667 0.34 0.00 44.87 1.89
585 623 3.749088 GTGACATCCAATCACAACCGTAA 59.251 43.478 0.34 0.00 44.87 3.18
586 624 3.331150 GTGACATCCAATCACAACCGTA 58.669 45.455 0.34 0.00 44.87 4.02
587 625 2.151202 GTGACATCCAATCACAACCGT 58.849 47.619 0.34 0.00 44.87 4.83
588 626 1.128507 CGTGACATCCAATCACAACCG 59.871 52.381 6.01 0.00 45.64 4.44
589 627 1.468520 CCGTGACATCCAATCACAACC 59.531 52.381 6.01 0.00 45.64 3.77
590 628 1.468520 CCCGTGACATCCAATCACAAC 59.531 52.381 6.01 0.00 45.64 3.32
591 629 1.612991 CCCCGTGACATCCAATCACAA 60.613 52.381 6.01 0.00 45.64 3.33
592 630 0.035534 CCCCGTGACATCCAATCACA 60.036 55.000 6.01 0.00 45.64 3.58
593 631 1.376609 GCCCCGTGACATCCAATCAC 61.377 60.000 0.00 0.00 42.57 3.06
594 632 1.077787 GCCCCGTGACATCCAATCA 60.078 57.895 0.00 0.00 0.00 2.57
595 633 2.180204 CGCCCCGTGACATCCAATC 61.180 63.158 0.00 0.00 0.00 2.67
596 634 2.124736 CGCCCCGTGACATCCAAT 60.125 61.111 0.00 0.00 0.00 3.16
597 635 3.309436 CTCGCCCCGTGACATCCAA 62.309 63.158 0.00 0.00 0.00 3.53
598 636 3.770040 CTCGCCCCGTGACATCCA 61.770 66.667 0.00 0.00 0.00 3.41
599 637 4.530857 CCTCGCCCCGTGACATCC 62.531 72.222 0.00 0.00 0.00 3.51
621 659 2.124778 GGAAGGAGAGCAGGCAGC 60.125 66.667 0.00 0.00 46.19 5.25
622 660 2.588989 GGGAAGGAGAGCAGGCAG 59.411 66.667 0.00 0.00 0.00 4.85
623 661 3.011517 GGGGAAGGAGAGCAGGCA 61.012 66.667 0.00 0.00 0.00 4.75
624 662 3.803162 GGGGGAAGGAGAGCAGGC 61.803 72.222 0.00 0.00 0.00 4.85
641 679 4.477975 GACTCGGCAGGACGTCGG 62.478 72.222 9.92 5.44 44.96 4.79
642 680 4.813526 CGACTCGGCAGGACGTCG 62.814 72.222 9.92 0.00 46.75 5.12
673 711 1.746991 GTGGCCACCTAGCTTGAGC 60.747 63.158 26.31 0.00 42.49 4.26
674 712 1.448540 CGTGGCCACCTAGCTTGAG 60.449 63.158 29.95 8.78 0.00 3.02
675 713 1.264749 ATCGTGGCCACCTAGCTTGA 61.265 55.000 29.95 19.00 0.00 3.02
676 714 0.811616 GATCGTGGCCACCTAGCTTG 60.812 60.000 29.95 14.08 0.00 4.01
677 715 1.264749 TGATCGTGGCCACCTAGCTT 61.265 55.000 29.95 8.36 0.00 3.74
678 716 1.685765 TGATCGTGGCCACCTAGCT 60.686 57.895 29.95 7.85 0.00 3.32
679 717 1.521681 GTGATCGTGGCCACCTAGC 60.522 63.158 29.95 20.73 0.00 3.42
680 718 1.226974 CGTGATCGTGGCCACCTAG 60.227 63.158 29.95 16.37 0.00 3.02
681 719 1.663379 CTCGTGATCGTGGCCACCTA 61.663 60.000 29.95 18.75 38.33 3.08
682 720 2.994995 TCGTGATCGTGGCCACCT 60.995 61.111 29.95 17.70 38.33 4.00
683 721 2.509336 CTCGTGATCGTGGCCACC 60.509 66.667 29.95 16.62 38.33 4.61
684 722 3.188786 GCTCGTGATCGTGGCCAC 61.189 66.667 26.78 26.78 38.33 5.01
685 723 3.381983 AGCTCGTGATCGTGGCCA 61.382 61.111 0.00 0.00 37.49 5.36
686 724 2.887568 CAGCTCGTGATCGTGGCC 60.888 66.667 0.00 0.00 37.49 5.36
687 725 2.887568 CCAGCTCGTGATCGTGGC 60.888 66.667 0.00 0.00 38.33 5.01
688 726 1.226802 CTCCAGCTCGTGATCGTGG 60.227 63.158 0.00 0.00 38.33 4.94
689 727 0.171231 TTCTCCAGCTCGTGATCGTG 59.829 55.000 0.00 0.00 38.33 4.35
690 728 0.453793 CTTCTCCAGCTCGTGATCGT 59.546 55.000 0.00 0.00 38.33 3.73
691 729 0.248825 CCTTCTCCAGCTCGTGATCG 60.249 60.000 0.00 0.00 38.55 3.69
692 730 0.103937 CCCTTCTCCAGCTCGTGATC 59.896 60.000 0.00 0.00 0.00 2.92
693 731 1.333636 CCCCTTCTCCAGCTCGTGAT 61.334 60.000 0.00 0.00 0.00 3.06
694 732 1.984570 CCCCTTCTCCAGCTCGTGA 60.985 63.158 0.00 0.00 0.00 4.35
695 733 2.581354 CCCCTTCTCCAGCTCGTG 59.419 66.667 0.00 0.00 0.00 4.35
696 734 2.685380 CCCCCTTCTCCAGCTCGT 60.685 66.667 0.00 0.00 0.00 4.18
729 767 3.730761 CTCTTGCCACCGCTGCAC 61.731 66.667 0.00 0.00 38.72 4.57
730 768 3.889134 CTCTCTTGCCACCGCTGCA 62.889 63.158 0.00 0.00 36.84 4.41
731 769 3.123620 CTCTCTTGCCACCGCTGC 61.124 66.667 0.00 0.00 35.36 5.25
732 770 1.447489 CTCTCTCTTGCCACCGCTG 60.447 63.158 0.00 0.00 35.36 5.18
733 771 1.603236 CTCTCTCTCTTGCCACCGCT 61.603 60.000 0.00 0.00 35.36 5.52
734 772 1.153667 CTCTCTCTCTTGCCACCGC 60.154 63.158 0.00 0.00 0.00 5.68
735 773 0.967887 TCCTCTCTCTCTTGCCACCG 60.968 60.000 0.00 0.00 0.00 4.94
736 774 0.823460 CTCCTCTCTCTCTTGCCACC 59.177 60.000 0.00 0.00 0.00 4.61
737 775 0.823460 CCTCCTCTCTCTCTTGCCAC 59.177 60.000 0.00 0.00 0.00 5.01
738 776 0.975040 GCCTCCTCTCTCTCTTGCCA 60.975 60.000 0.00 0.00 0.00 4.92
739 777 1.822615 GCCTCCTCTCTCTCTTGCC 59.177 63.158 0.00 0.00 0.00 4.52
740 778 1.437160 CGCCTCCTCTCTCTCTTGC 59.563 63.158 0.00 0.00 0.00 4.01
741 779 0.395036 TCCGCCTCCTCTCTCTCTTG 60.395 60.000 0.00 0.00 0.00 3.02
742 780 0.555769 ATCCGCCTCCTCTCTCTCTT 59.444 55.000 0.00 0.00 0.00 2.85
743 781 0.178992 CATCCGCCTCCTCTCTCTCT 60.179 60.000 0.00 0.00 0.00 3.10
744 782 0.179004 TCATCCGCCTCCTCTCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
745 783 0.178992 CTCATCCGCCTCCTCTCTCT 60.179 60.000 0.00 0.00 0.00 3.10
746 784 1.178534 CCTCATCCGCCTCCTCTCTC 61.179 65.000 0.00 0.00 0.00 3.20
747 785 1.152567 CCTCATCCGCCTCCTCTCT 60.153 63.158 0.00 0.00 0.00 3.10
748 786 2.866726 GCCTCATCCGCCTCCTCTC 61.867 68.421 0.00 0.00 0.00 3.20
749 787 2.841988 GCCTCATCCGCCTCCTCT 60.842 66.667 0.00 0.00 0.00 3.69
750 788 3.934962 GGCCTCATCCGCCTCCTC 61.935 72.222 0.00 0.00 43.48 3.71
777 815 4.154347 CACCTCCTCTCCTGCCGC 62.154 72.222 0.00 0.00 0.00 6.53
778 816 3.465403 CCACCTCCTCTCCTGCCG 61.465 72.222 0.00 0.00 0.00 5.69
779 817 3.791586 GCCACCTCCTCTCCTGCC 61.792 72.222 0.00 0.00 0.00 4.85
780 818 2.686835 AGCCACCTCCTCTCCTGC 60.687 66.667 0.00 0.00 0.00 4.85
781 819 3.028921 GCAGCCACCTCCTCTCCTG 62.029 68.421 0.00 0.00 0.00 3.86
782 820 2.686835 GCAGCCACCTCCTCTCCT 60.687 66.667 0.00 0.00 0.00 3.69
783 821 4.154347 CGCAGCCACCTCCTCTCC 62.154 72.222 0.00 0.00 0.00 3.71
784 822 3.071206 TCGCAGCCACCTCCTCTC 61.071 66.667 0.00 0.00 0.00 3.20
785 823 3.073735 CTCGCAGCCACCTCCTCT 61.074 66.667 0.00 0.00 0.00 3.69
786 824 4.154347 CCTCGCAGCCACCTCCTC 62.154 72.222 0.00 0.00 0.00 3.71
810 848 3.711541 CTACTACCACCGCCCGTGC 62.712 68.421 0.00 0.00 41.53 5.34
811 849 2.001361 CTCTACTACCACCGCCCGTG 62.001 65.000 0.00 0.00 42.62 4.94
812 850 1.751927 CTCTACTACCACCGCCCGT 60.752 63.158 0.00 0.00 0.00 5.28
813 851 2.487532 CCTCTACTACCACCGCCCG 61.488 68.421 0.00 0.00 0.00 6.13
814 852 1.076485 TCCTCTACTACCACCGCCC 60.076 63.158 0.00 0.00 0.00 6.13
815 853 1.108132 CCTCCTCTACTACCACCGCC 61.108 65.000 0.00 0.00 0.00 6.13
816 854 1.736365 GCCTCCTCTACTACCACCGC 61.736 65.000 0.00 0.00 0.00 5.68
817 855 1.445716 CGCCTCCTCTACTACCACCG 61.446 65.000 0.00 0.00 0.00 4.94
818 856 1.108132 CCGCCTCCTCTACTACCACC 61.108 65.000 0.00 0.00 0.00 4.61
819 857 0.106819 TCCGCCTCCTCTACTACCAC 60.107 60.000 0.00 0.00 0.00 4.16
820 858 0.106819 GTCCGCCTCCTCTACTACCA 60.107 60.000 0.00 0.00 0.00 3.25
821 859 1.165284 CGTCCGCCTCCTCTACTACC 61.165 65.000 0.00 0.00 0.00 3.18
822 860 0.179062 TCGTCCGCCTCCTCTACTAC 60.179 60.000 0.00 0.00 0.00 2.73
823 861 0.106335 CTCGTCCGCCTCCTCTACTA 59.894 60.000 0.00 0.00 0.00 1.82
824 862 1.153127 CTCGTCCGCCTCCTCTACT 60.153 63.158 0.00 0.00 0.00 2.57
825 863 2.188161 CCTCGTCCGCCTCCTCTAC 61.188 68.421 0.00 0.00 0.00 2.59
826 864 2.192443 CCTCGTCCGCCTCCTCTA 59.808 66.667 0.00 0.00 0.00 2.43
855 893 4.200283 CTCCTCTCCTGTCGCCGC 62.200 72.222 0.00 0.00 0.00 6.53
856 894 3.522731 CCTCCTCTCCTGTCGCCG 61.523 72.222 0.00 0.00 0.00 6.46
857 895 3.844090 GCCTCCTCTCCTGTCGCC 61.844 72.222 0.00 0.00 0.00 5.54
858 896 1.965754 ATTGCCTCCTCTCCTGTCGC 61.966 60.000 0.00 0.00 0.00 5.19
859 897 0.179089 CATTGCCTCCTCTCCTGTCG 60.179 60.000 0.00 0.00 0.00 4.35
860 898 0.908198 ACATTGCCTCCTCTCCTGTC 59.092 55.000 0.00 0.00 0.00 3.51
861 899 1.366319 AACATTGCCTCCTCTCCTGT 58.634 50.000 0.00 0.00 0.00 4.00
862 900 2.503895 AAACATTGCCTCCTCTCCTG 57.496 50.000 0.00 0.00 0.00 3.86
863 901 3.532641 AAAAACATTGCCTCCTCTCCT 57.467 42.857 0.00 0.00 0.00 3.69
881 919 3.630312 GCAGAGGCGGTGGATAATAAAAA 59.370 43.478 0.00 0.00 0.00 1.94
882 920 3.211045 GCAGAGGCGGTGGATAATAAAA 58.789 45.455 0.00 0.00 0.00 1.52
883 921 2.846193 GCAGAGGCGGTGGATAATAAA 58.154 47.619 0.00 0.00 0.00 1.40
884 922 2.543777 GCAGAGGCGGTGGATAATAA 57.456 50.000 0.00 0.00 0.00 1.40
896 934 0.390860 ACGTATCCATCAGCAGAGGC 59.609 55.000 0.00 0.00 41.61 4.70
897 935 1.410517 ACACGTATCCATCAGCAGAGG 59.589 52.381 0.00 0.00 0.00 3.69
898 936 2.879002 ACACGTATCCATCAGCAGAG 57.121 50.000 0.00 0.00 0.00 3.35
899 937 2.760650 AGAACACGTATCCATCAGCAGA 59.239 45.455 0.00 0.00 0.00 4.26
900 938 3.170791 AGAACACGTATCCATCAGCAG 57.829 47.619 0.00 0.00 0.00 4.24
901 939 3.521560 GAAGAACACGTATCCATCAGCA 58.478 45.455 0.00 0.00 0.00 4.41
902 940 2.866762 GGAAGAACACGTATCCATCAGC 59.133 50.000 0.00 0.00 32.08 4.26
903 941 4.115516 CTGGAAGAACACGTATCCATCAG 58.884 47.826 6.65 4.44 40.94 2.90
904 942 3.767131 TCTGGAAGAACACGTATCCATCA 59.233 43.478 6.65 0.00 42.31 3.07
905 943 4.386867 TCTGGAAGAACACGTATCCATC 57.613 45.455 6.65 2.52 42.31 3.51
919 957 6.804295 GCTATCACAACGTATAGATCTGGAAG 59.196 42.308 5.18 0.00 0.00 3.46
920 958 6.264518 TGCTATCACAACGTATAGATCTGGAA 59.735 38.462 5.18 0.00 0.00 3.53
921 959 5.768164 TGCTATCACAACGTATAGATCTGGA 59.232 40.000 5.18 0.00 0.00 3.86
922 960 6.013842 TGCTATCACAACGTATAGATCTGG 57.986 41.667 5.18 0.00 0.00 3.86
923 961 7.596621 ACAATGCTATCACAACGTATAGATCTG 59.403 37.037 5.18 0.00 0.00 2.90
924 962 7.596621 CACAATGCTATCACAACGTATAGATCT 59.403 37.037 0.00 0.00 0.00 2.75
925 963 7.620188 GCACAATGCTATCACAACGTATAGATC 60.620 40.741 7.17 0.00 40.96 2.75
926 964 6.146184 GCACAATGCTATCACAACGTATAGAT 59.854 38.462 7.17 4.87 40.96 1.98
927 965 5.462068 GCACAATGCTATCACAACGTATAGA 59.538 40.000 7.17 0.00 40.96 1.98
928 966 5.670097 GCACAATGCTATCACAACGTATAG 58.330 41.667 0.00 0.00 40.96 1.31
929 967 5.651172 GCACAATGCTATCACAACGTATA 57.349 39.130 0.00 0.00 40.96 1.47
930 968 4.536364 GCACAATGCTATCACAACGTAT 57.464 40.909 0.00 0.00 40.96 3.06
932 970 2.900122 GCACAATGCTATCACAACGT 57.100 45.000 0.00 0.00 40.96 3.99
943 981 3.855950 GCAAACTAATCAGAGCACAATGC 59.144 43.478 0.00 0.00 45.46 3.56
944 982 4.093514 CGCAAACTAATCAGAGCACAATG 58.906 43.478 0.00 0.00 0.00 2.82
945 983 3.426695 GCGCAAACTAATCAGAGCACAAT 60.427 43.478 0.30 0.00 0.00 2.71
946 984 2.095768 GCGCAAACTAATCAGAGCACAA 60.096 45.455 0.30 0.00 0.00 3.33
947 985 1.464608 GCGCAAACTAATCAGAGCACA 59.535 47.619 0.30 0.00 0.00 4.57
948 986 1.527793 CGCGCAAACTAATCAGAGCAC 60.528 52.381 8.75 0.00 0.00 4.40
949 987 0.721154 CGCGCAAACTAATCAGAGCA 59.279 50.000 8.75 0.00 0.00 4.26
950 988 0.026803 CCGCGCAAACTAATCAGAGC 59.973 55.000 8.75 0.00 0.00 4.09
951 989 1.324736 GTCCGCGCAAACTAATCAGAG 59.675 52.381 8.75 0.00 0.00 3.35
952 990 1.067142 AGTCCGCGCAAACTAATCAGA 60.067 47.619 8.75 0.00 0.00 3.27
953 991 1.061131 CAGTCCGCGCAAACTAATCAG 59.939 52.381 8.75 0.00 0.00 2.90
954 992 1.075542 CAGTCCGCGCAAACTAATCA 58.924 50.000 8.75 0.00 0.00 2.57
955 993 1.355971 TCAGTCCGCGCAAACTAATC 58.644 50.000 8.75 0.00 0.00 1.75
956 994 1.803334 TTCAGTCCGCGCAAACTAAT 58.197 45.000 8.75 0.00 0.00 1.73
957 995 1.584175 TTTCAGTCCGCGCAAACTAA 58.416 45.000 8.75 0.00 0.00 2.24
965 1003 3.120199 ACATCAAAGATTTTCAGTCCGCG 60.120 43.478 0.00 0.00 0.00 6.46
968 1006 8.360390 ACCTAAAACATCAAAGATTTTCAGTCC 58.640 33.333 0.00 0.00 0.00 3.85
971 1009 9.403110 CTGACCTAAAACATCAAAGATTTTCAG 57.597 33.333 0.00 0.00 0.00 3.02
990 1028 0.399091 CTCCCCTCATGCCTGACCTA 60.399 60.000 0.00 0.00 0.00 3.08
1016 1066 3.063997 GCTAATGTTCACAGGATCGTTGG 59.936 47.826 1.57 0.00 0.00 3.77
1051 1101 0.964700 TCATCAGAGCTGCTATCCGG 59.035 55.000 0.15 0.00 0.00 5.14
1073 1123 4.645762 TCATCAGAGCTCATGTGTAGAC 57.354 45.455 17.77 0.00 0.00 2.59
1077 1127 2.028658 ACGTTCATCAGAGCTCATGTGT 60.029 45.455 17.77 9.37 0.00 3.72
1078 1128 2.347755 CACGTTCATCAGAGCTCATGTG 59.652 50.000 17.77 11.57 0.00 3.21
1154 1204 0.879400 GACGCCATCATCAGAGCTGG 60.879 60.000 0.00 0.00 0.00 4.85
1173 1223 1.543614 CTTCATCAGAGCTCGTGTCG 58.456 55.000 8.37 0.00 0.00 4.35
1179 1229 9.601217 TTACTAAAAATACCTTCATCAGAGCTC 57.399 33.333 5.27 5.27 0.00 4.09
1228 1278 9.693739 ATACAGACCATGACCACATTTTATTAA 57.306 29.630 0.00 0.00 34.15 1.40
1307 1358 6.465084 AGCTTCTTTTTCTTCATACGGTAGT 58.535 36.000 0.00 0.00 0.00 2.73
1354 1405 1.008403 TACTCCCTAGGGCAGTCACT 58.992 55.000 26.74 12.23 34.68 3.41
1464 1515 3.369471 CCAGTCGGCTTCAGAATTAGGAA 60.369 47.826 0.00 0.00 0.00 3.36
1603 1654 1.271597 ACCATTCTCTGCCGAGCTTTT 60.272 47.619 0.00 0.00 37.19 2.27
1610 1661 1.936547 GCTTCTTACCATTCTCTGCCG 59.063 52.381 0.00 0.00 0.00 5.69
1711 1763 6.480320 GCTTCTCAGTGAACAAAGTAGAGAAA 59.520 38.462 0.00 0.00 39.34 2.52
1790 1842 3.945285 ACATAGATTAAACAACGCCCAGG 59.055 43.478 0.00 0.00 0.00 4.45
1806 1858 5.104527 ACCCCTTTCATCAATCGAACATAGA 60.105 40.000 0.00 0.00 0.00 1.98
1817 1869 3.636300 CTGTTGTCAACCCCTTTCATCAA 59.364 43.478 13.13 0.00 0.00 2.57
1837 1889 4.708177 AGTTATGTGTTATAGCAGCCCTG 58.292 43.478 0.00 0.00 0.00 4.45
1882 1934 4.745351 AGATTTCCCCTTCTTTCAGCTTT 58.255 39.130 0.00 0.00 0.00 3.51
1914 1966 1.771255 CCCCCTTGAAATCTCGGAGAT 59.229 52.381 14.68 14.68 36.28 2.75
1926 1978 4.284550 GCACTGGCACCCCCTTGA 62.285 66.667 0.00 0.00 40.72 3.02
2038 2090 4.757149 GCATCACAGAAACCTACAGAAACT 59.243 41.667 0.00 0.00 0.00 2.66
2083 2135 1.301165 GCCCTTGCAAAGCACCTTG 60.301 57.895 14.55 0.00 44.44 3.61
2189 2241 1.139853 AGAAAAGCATCCTAGCTCCCG 59.860 52.381 0.00 0.00 45.89 5.14
2229 2282 9.543783 CATCAGTGCATTACATAGATAGCATAT 57.456 33.333 0.00 0.00 34.24 1.78
2250 2303 9.743057 CTAATAGTTTAGAGTCTTCACCATCAG 57.257 37.037 0.00 0.00 37.59 2.90
2256 2309 8.463607 AGCTCACTAATAGTTTAGAGTCTTCAC 58.536 37.037 0.00 0.00 38.56 3.18
2309 2362 4.319766 CGCTTAGTTGCTTCAGACAAACAT 60.320 41.667 0.00 0.00 0.00 2.71
2323 2376 3.431856 TCTATGTGCGTACGCTTAGTTG 58.568 45.455 36.99 22.73 42.51 3.16
2326 2379 5.677612 GCTATATCTATGTGCGTACGCTTAG 59.322 44.000 36.99 30.34 42.51 2.18
2380 2434 5.140747 TGTTGCGGCCAAAACTTTAATAT 57.859 34.783 16.26 0.00 31.68 1.28
2381 2435 4.585955 TGTTGCGGCCAAAACTTTAATA 57.414 36.364 16.26 0.00 31.68 0.98
2400 2454 8.757982 ATTATCCTTCATGCAGAGTATTTTGT 57.242 30.769 0.00 0.00 0.00 2.83
2469 2523 0.391661 ATCCAAGCAACAGCGTCGAT 60.392 50.000 0.00 0.00 0.00 3.59
2476 2530 6.630444 ATGAGCTATAAATCCAAGCAACAG 57.370 37.500 0.00 0.00 38.75 3.16
2492 2546 0.829990 TCGACCATGGCAATGAGCTA 59.170 50.000 13.04 0.00 44.79 3.32
2520 2574 4.680440 GCCTGGAAAAAGAAGTGCAAAGAA 60.680 41.667 0.00 0.00 0.00 2.52
2596 2650 8.245491 GGTAAAACACTCACAAGAAAAACCTAA 58.755 33.333 0.00 0.00 0.00 2.69
2643 2697 9.981460 ATAATCCTTTTATTATTGCCTCTAGGG 57.019 33.333 0.00 0.00 29.60 3.53
2680 2734 9.956720 GGATAAAGACAATTATCATGAACAAGG 57.043 33.333 0.00 0.00 41.84 3.61
2684 2738 9.403110 GCATGGATAAAGACAATTATCATGAAC 57.597 33.333 0.00 0.00 41.84 3.18
2685 2739 9.358406 AGCATGGATAAAGACAATTATCATGAA 57.642 29.630 0.00 0.00 41.84 2.57
2686 2740 8.929260 AGCATGGATAAAGACAATTATCATGA 57.071 30.769 0.00 0.00 41.84 3.07
2693 2747 9.632638 ACAGTTATAGCATGGATAAAGACAATT 57.367 29.630 0.00 0.00 0.00 2.32
2702 2756 8.638873 CCGGATAATACAGTTATAGCATGGATA 58.361 37.037 0.00 0.00 0.00 2.59
2703 2757 7.344612 TCCGGATAATACAGTTATAGCATGGAT 59.655 37.037 0.00 0.00 0.00 3.41
2704 2758 6.666113 TCCGGATAATACAGTTATAGCATGGA 59.334 38.462 0.00 0.00 0.00 3.41
2705 2759 6.873997 TCCGGATAATACAGTTATAGCATGG 58.126 40.000 0.00 0.00 0.00 3.66
2706 2760 8.771920 TTTCCGGATAATACAGTTATAGCATG 57.228 34.615 4.15 0.00 0.00 4.06
2707 2761 9.601217 GATTTCCGGATAATACAGTTATAGCAT 57.399 33.333 4.15 0.00 0.00 3.79
2708 2762 7.758076 CGATTTCCGGATAATACAGTTATAGCA 59.242 37.037 4.15 0.00 33.91 3.49
2709 2763 7.758528 ACGATTTCCGGATAATACAGTTATAGC 59.241 37.037 4.15 0.00 43.93 2.97
2714 2768 9.415544 GTATTACGATTTCCGGATAATACAGTT 57.584 33.333 26.02 11.20 39.68 3.16
2715 2769 8.579006 TGTATTACGATTTCCGGATAATACAGT 58.421 33.333 28.04 20.31 41.92 3.55
2716 2770 8.857216 GTGTATTACGATTTCCGGATAATACAG 58.143 37.037 30.32 18.57 44.29 2.74
2717 2771 8.746922 GTGTATTACGATTTCCGGATAATACA 57.253 34.615 28.04 28.04 43.07 2.29
2734 2788 7.916977 TGGTCTATGTATTCACACGTGTATTAC 59.083 37.037 22.90 20.91 37.54 1.89
2735 2789 7.998580 TGGTCTATGTATTCACACGTGTATTA 58.001 34.615 22.90 9.93 37.54 0.98
2736 2790 6.869695 TGGTCTATGTATTCACACGTGTATT 58.130 36.000 22.90 11.42 37.54 1.89
2737 2791 6.459670 TGGTCTATGTATTCACACGTGTAT 57.540 37.500 22.90 14.96 37.54 2.29
2738 2792 5.900865 TGGTCTATGTATTCACACGTGTA 57.099 39.130 22.90 7.35 37.54 2.90
2739 2793 4.794278 TGGTCTATGTATTCACACGTGT 57.206 40.909 17.22 17.22 37.54 4.49
2740 2794 7.946655 ATTATGGTCTATGTATTCACACGTG 57.053 36.000 15.48 15.48 37.54 4.49
2741 2795 9.639601 CATATTATGGTCTATGTATTCACACGT 57.360 33.333 0.00 0.00 37.54 4.49
2742 2796 9.639601 ACATATTATGGTCTATGTATTCACACG 57.360 33.333 8.48 0.00 36.93 4.49
2745 2799 9.601217 GGGACATATTATGGTCTATGTATTCAC 57.399 37.037 8.48 0.00 38.38 3.18
2746 2800 9.560860 AGGGACATATTATGGTCTATGTATTCA 57.439 33.333 8.48 0.00 38.38 2.57
2753 2807 9.203163 GCTTACTAGGGACATATTATGGTCTAT 57.797 37.037 8.48 1.09 34.49 1.98
2754 2808 7.618512 GGCTTACTAGGGACATATTATGGTCTA 59.381 40.741 8.48 5.91 34.49 2.59
2755 2809 6.440965 GGCTTACTAGGGACATATTATGGTCT 59.559 42.308 8.48 5.17 34.49 3.85
2756 2810 6.440965 AGGCTTACTAGGGACATATTATGGTC 59.559 42.308 8.48 3.85 33.60 4.02
2757 2811 6.331846 AGGCTTACTAGGGACATATTATGGT 58.668 40.000 8.48 0.00 33.60 3.55
2758 2812 6.670027 AGAGGCTTACTAGGGACATATTATGG 59.330 42.308 8.48 0.00 33.60 2.74
2759 2813 7.726033 AGAGGCTTACTAGGGACATATTATG 57.274 40.000 2.03 2.03 0.00 1.90
2760 2814 8.625571 ACTAGAGGCTTACTAGGGACATATTAT 58.374 37.037 13.13 0.00 40.86 1.28
2761 2815 7.997915 ACTAGAGGCTTACTAGGGACATATTA 58.002 38.462 13.13 0.00 40.86 0.98
2762 2816 6.865520 ACTAGAGGCTTACTAGGGACATATT 58.134 40.000 13.13 0.00 40.86 1.28
2763 2817 6.471942 ACTAGAGGCTTACTAGGGACATAT 57.528 41.667 13.13 0.00 40.86 1.78
2764 2818 5.926580 ACTAGAGGCTTACTAGGGACATA 57.073 43.478 13.13 0.00 40.86 2.29
2765 2819 4.817874 ACTAGAGGCTTACTAGGGACAT 57.182 45.455 13.13 0.00 40.86 3.06
2766 2820 4.017775 TCAACTAGAGGCTTACTAGGGACA 60.018 45.833 13.13 0.00 40.86 4.02
2767 2821 4.338964 GTCAACTAGAGGCTTACTAGGGAC 59.661 50.000 13.13 14.30 40.86 4.46
2768 2822 4.230041 AGTCAACTAGAGGCTTACTAGGGA 59.770 45.833 13.13 8.30 40.86 4.20
2769 2823 4.538738 AGTCAACTAGAGGCTTACTAGGG 58.461 47.826 13.13 6.54 40.86 3.53
2770 2824 5.239963 GCTAGTCAACTAGAGGCTTACTAGG 59.760 48.000 19.03 0.00 46.80 3.02
2771 2825 6.059484 AGCTAGTCAACTAGAGGCTTACTAG 58.941 44.000 19.03 8.32 46.80 2.57
2772 2826 6.003859 AGCTAGTCAACTAGAGGCTTACTA 57.996 41.667 19.03 0.00 46.80 1.82
2773 2827 4.862371 AGCTAGTCAACTAGAGGCTTACT 58.138 43.478 19.03 3.99 46.80 2.24
2774 2828 5.105675 ACAAGCTAGTCAACTAGAGGCTTAC 60.106 44.000 19.03 1.96 46.80 2.34
2775 2829 5.017490 ACAAGCTAGTCAACTAGAGGCTTA 58.983 41.667 19.03 0.00 46.80 3.09
2776 2830 3.835395 ACAAGCTAGTCAACTAGAGGCTT 59.165 43.478 19.03 13.32 46.80 4.35
2777 2831 3.436243 ACAAGCTAGTCAACTAGAGGCT 58.564 45.455 19.03 8.58 46.80 4.58
2778 2832 3.878160 ACAAGCTAGTCAACTAGAGGC 57.122 47.619 19.03 6.58 46.80 4.70
2779 2833 5.392767 TCAACAAGCTAGTCAACTAGAGG 57.607 43.478 19.03 10.27 46.80 3.69
2780 2834 6.625362 TGATCAACAAGCTAGTCAACTAGAG 58.375 40.000 19.03 10.84 46.80 2.43
2781 2835 6.590234 TGATCAACAAGCTAGTCAACTAGA 57.410 37.500 19.03 0.00 46.80 2.43
2782 2836 7.054855 GTTGATCAACAAGCTAGTCAACTAG 57.945 40.000 29.43 11.99 42.90 2.57
2784 2838 5.931441 GTTGATCAACAAGCTAGTCAACT 57.069 39.130 29.43 0.00 41.13 3.16
2797 2851 6.992063 AACCATGACTATCTGTTGATCAAC 57.008 37.500 28.10 28.10 41.50 3.18
2798 2852 6.599244 GGAAACCATGACTATCTGTTGATCAA 59.401 38.462 3.38 3.38 34.32 2.57
2799 2853 6.070021 AGGAAACCATGACTATCTGTTGATCA 60.070 38.462 0.00 0.00 34.32 2.92
2800 2854 6.259608 CAGGAAACCATGACTATCTGTTGATC 59.740 42.308 0.00 0.00 34.32 2.92
2801 2855 6.070021 TCAGGAAACCATGACTATCTGTTGAT 60.070 38.462 0.00 0.00 36.74 2.57
2802 2856 5.248248 TCAGGAAACCATGACTATCTGTTGA 59.752 40.000 0.00 0.00 0.00 3.18
2803 2857 5.352569 GTCAGGAAACCATGACTATCTGTTG 59.647 44.000 0.00 0.00 42.06 3.33
2804 2858 5.491982 GTCAGGAAACCATGACTATCTGTT 58.508 41.667 0.00 0.00 42.06 3.16
2805 2859 5.091261 GTCAGGAAACCATGACTATCTGT 57.909 43.478 0.00 0.00 42.06 3.41
2812 2866 4.192317 GTCCATAGTCAGGAAACCATGAC 58.808 47.826 0.00 2.44 44.97 3.06
2813 2867 3.843619 TGTCCATAGTCAGGAAACCATGA 59.156 43.478 0.00 0.00 36.80 3.07
2814 2868 4.220693 TGTCCATAGTCAGGAAACCATG 57.779 45.455 0.00 0.00 36.80 3.66
2815 2869 4.474651 TGATGTCCATAGTCAGGAAACCAT 59.525 41.667 0.00 0.00 36.80 3.55
2816 2870 3.843619 TGATGTCCATAGTCAGGAAACCA 59.156 43.478 0.00 0.00 36.80 3.67
2817 2871 4.162320 TCTGATGTCCATAGTCAGGAAACC 59.838 45.833 0.00 0.00 39.77 3.27
2818 2872 5.344743 TCTGATGTCCATAGTCAGGAAAC 57.655 43.478 0.00 0.00 39.77 2.78
2819 2873 5.426509 ACATCTGATGTCCATAGTCAGGAAA 59.573 40.000 17.24 0.00 39.92 3.13
2820 2874 4.964897 ACATCTGATGTCCATAGTCAGGAA 59.035 41.667 17.24 0.00 39.92 3.36
2821 2875 4.550669 ACATCTGATGTCCATAGTCAGGA 58.449 43.478 17.24 0.00 39.92 3.86
2822 2876 4.952071 ACATCTGATGTCCATAGTCAGG 57.048 45.455 17.24 0.00 39.92 3.86
2834 2888 5.233050 GTCCTGTTATCAACGACATCTGATG 59.767 44.000 15.83 15.83 34.21 3.07
2835 2889 5.352284 GTCCTGTTATCAACGACATCTGAT 58.648 41.667 0.00 0.00 36.30 2.90
2836 2890 4.381612 GGTCCTGTTATCAACGACATCTGA 60.382 45.833 0.00 0.00 0.00 3.27
2837 2891 3.865745 GGTCCTGTTATCAACGACATCTG 59.134 47.826 0.00 0.00 0.00 2.90
2838 2892 3.513912 TGGTCCTGTTATCAACGACATCT 59.486 43.478 0.00 0.00 0.00 2.90
2839 2893 3.617263 GTGGTCCTGTTATCAACGACATC 59.383 47.826 0.00 0.00 0.00 3.06
2840 2894 3.596214 GTGGTCCTGTTATCAACGACAT 58.404 45.455 0.00 0.00 0.00 3.06
2841 2895 3.034721 GTGGTCCTGTTATCAACGACA 57.965 47.619 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.