Multiple sequence alignment - TraesCS6B01G217400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G217400 chr6B 100.000 6848 0 0 1 6848 299055831 299048984 0.000000e+00 12646.0
1 TraesCS6B01G217400 chr6B 97.864 749 14 2 3266 4013 362871205 362870458 0.000000e+00 1293.0
2 TraesCS6B01G217400 chr6B 97.723 527 12 0 2731 3257 362872231 362871705 0.000000e+00 907.0
3 TraesCS6B01G217400 chr6B 98.958 192 2 0 1 192 86171278 86171087 1.830000e-90 344.0
4 TraesCS6B01G217400 chr6B 98.953 191 2 0 1 191 427133756 427133566 6.580000e-90 342.0
5 TraesCS6B01G217400 chr6B 100.000 182 0 0 715 896 135858305 135858486 3.060000e-88 337.0
6 TraesCS6B01G217400 chr6B 97.238 181 5 0 715 895 76797932 76798112 2.400000e-79 307.0
7 TraesCS6B01G217400 chr6B 96.685 181 6 0 715 895 689529672 689529492 1.120000e-77 302.0
8 TraesCS6B01G217400 chr6B 97.531 81 2 0 1745 1825 26619092 26619172 9.260000e-29 139.0
9 TraesCS6B01G217400 chr6A 95.196 2477 64 19 4416 6848 223410910 223413375 0.000000e+00 3864.0
10 TraesCS6B01G217400 chr6A 91.430 1867 99 28 899 2741 223408589 223410418 0.000000e+00 2505.0
11 TraesCS6B01G217400 chr6A 86.976 453 53 4 189 639 223407929 223408377 7.930000e-139 505.0
12 TraesCS6B01G217400 chr6A 80.982 652 100 20 1 639 77531825 77532465 4.770000e-136 496.0
13 TraesCS6B01G217400 chr6A 90.994 322 20 7 4034 4346 223410440 223410761 6.350000e-115 425.0
14 TraesCS6B01G217400 chr6A 91.791 134 6 5 4249 4381 332188154 332188025 1.520000e-41 182.0
15 TraesCS6B01G217400 chr6D 95.221 2469 68 22 4416 6848 163130332 163132786 0.000000e+00 3860.0
16 TraesCS6B01G217400 chr6D 96.074 815 31 1 899 1712 163128147 163128961 0.000000e+00 1327.0
17 TraesCS6B01G217400 chr6D 90.978 920 46 16 1848 2741 163129019 163129927 0.000000e+00 1205.0
18 TraesCS6B01G217400 chr6D 94.286 245 13 1 4035 4278 163129949 163130193 2.330000e-99 374.0
19 TraesCS6B01G217400 chr7B 96.901 1323 22 2 2731 4034 701475861 701477183 0.000000e+00 2198.0
20 TraesCS6B01G217400 chr7B 95.242 1324 39 5 2731 4034 414041370 414040051 0.000000e+00 2074.0
21 TraesCS6B01G217400 chr7B 97.414 116 1 2 4267 4381 191777189 191777303 5.420000e-46 196.0
22 TraesCS6B01G217400 chr7B 94.355 124 6 1 4266 4388 452155134 452155257 9.070000e-44 189.0
23 TraesCS6B01G217400 chr7B 95.402 87 4 0 1745 1831 194555198 194555112 9.260000e-29 139.0
24 TraesCS6B01G217400 chr2A 96.752 1324 24 2 2731 4035 761203631 761202308 0.000000e+00 2189.0
25 TraesCS6B01G217400 chr2B 96.674 1323 16 3 2731 4034 567989844 567988531 0.000000e+00 2174.0
26 TraesCS6B01G217400 chr2B 95.238 1323 40 4 2731 4034 554089272 554090590 0.000000e+00 2073.0
27 TraesCS6B01G217400 chr2B 97.765 179 4 0 717 895 763843246 763843068 6.670000e-80 309.0
28 TraesCS6B01G217400 chr2B 98.198 111 1 1 4271 4381 123063307 123063416 7.010000e-45 193.0
29 TraesCS6B01G217400 chr2B 98.750 80 1 0 1745 1824 297438948 297439027 7.160000e-30 143.0
30 TraesCS6B01G217400 chr5B 94.932 1322 39 6 2731 4033 640932263 640930951 0.000000e+00 2045.0
31 TraesCS6B01G217400 chr5B 99.451 182 1 0 715 896 638595180 638594999 1.420000e-86 331.0
32 TraesCS6B01G217400 chr5B 98.901 182 2 0 715 896 520901214 520901395 6.620000e-85 326.0
33 TraesCS6B01G217400 chr5B 97.531 81 2 0 1745 1825 482285937 482285857 9.260000e-29 139.0
34 TraesCS6B01G217400 chr5B 98.718 78 1 0 1745 1822 482285870 482285947 9.260000e-29 139.0
35 TraesCS6B01G217400 chr5B 96.471 85 1 2 1745 1827 587069696 587069612 9.260000e-29 139.0
36 TraesCS6B01G217400 chr1A 91.841 1005 54 12 3036 4034 479288375 479289357 0.000000e+00 1376.0
37 TraesCS6B01G217400 chr1A 91.329 1038 33 16 3020 4030 539591466 539592473 0.000000e+00 1365.0
38 TraesCS6B01G217400 chr1A 96.233 292 9 1 2731 3020 539591139 539591430 1.730000e-130 477.0
39 TraesCS6B01G217400 chr1A 93.793 290 18 0 2731 3020 479288028 479288317 2.930000e-118 436.0
40 TraesCS6B01G217400 chr5D 85.529 463 55 10 192 647 456166183 456166640 2.240000e-129 473.0
41 TraesCS6B01G217400 chr3A 86.333 439 52 7 207 642 638712980 638712547 8.040000e-129 472.0
42 TraesCS6B01G217400 chr7D 85.649 439 58 3 207 645 469190909 469190476 2.250000e-124 457.0
43 TraesCS6B01G217400 chr7D 84.768 453 59 8 192 641 385705072 385705517 4.870000e-121 446.0
44 TraesCS6B01G217400 chr7D 84.176 455 64 7 192 645 156784814 156784367 1.050000e-117 435.0
45 TraesCS6B01G217400 chr1D 84.683 457 67 3 192 648 26698645 26699098 2.910000e-123 453.0
46 TraesCS6B01G217400 chr2D 84.176 455 65 6 192 642 420743396 420743847 1.050000e-117 435.0
47 TraesCS6B01G217400 chr2D 93.548 62 4 0 715 776 32774893 32774832 7.310000e-15 93.5
48 TraesCS6B01G217400 chr4B 98.454 194 3 0 1 194 206761867 206761674 6.580000e-90 342.0
49 TraesCS6B01G217400 chr4B 98.953 191 2 0 1 191 370371593 370371783 6.580000e-90 342.0
50 TraesCS6B01G217400 chr4B 98.953 191 2 0 1 191 394073986 394074176 6.580000e-90 342.0
51 TraesCS6B01G217400 chr4B 97.561 82 2 0 1745 1826 643626694 643626613 2.570000e-29 141.0
52 TraesCS6B01G217400 chr3B 98.953 191 2 0 1 191 93865465 93865655 6.580000e-90 342.0
53 TraesCS6B01G217400 chr3B 100.000 182 0 0 715 896 9191831 9192012 3.060000e-88 337.0
54 TraesCS6B01G217400 chr7A 100.000 182 0 0 715 896 284112729 284112910 3.060000e-88 337.0
55 TraesCS6B01G217400 chr7A 96.535 202 6 1 1 202 668737440 668737240 3.960000e-87 333.0
56 TraesCS6B01G217400 chr7A 93.600 125 8 0 4257 4381 645026041 645026165 3.260000e-43 187.0
57 TraesCS6B01G217400 chr5A 96.985 199 4 2 1 198 397694576 397694773 3.960000e-87 333.0
58 TraesCS6B01G217400 chr5A 93.077 130 8 1 4274 4402 177604935 177604806 9.070000e-44 189.0
59 TraesCS6B01G217400 chr5A 93.651 126 5 3 4261 4384 701963315 701963191 1.170000e-42 185.0
60 TraesCS6B01G217400 chrUn 98.876 178 2 0 715 892 342572504 342572681 1.110000e-82 318.0
61 TraesCS6B01G217400 chr3D 93.182 132 7 2 4259 4389 230765629 230765759 7.010000e-45 193.0
62 TraesCS6B01G217400 chr4A 97.619 84 2 0 1745 1828 729678469 729678552 1.990000e-30 145.0
63 TraesCS6B01G217400 chr4A 98.734 79 1 0 1743 1821 697942070 697941992 2.570000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G217400 chr6B 299048984 299055831 6847 True 12646.00 12646 100.00000 1 6848 1 chr6B.!!$R2 6847
1 TraesCS6B01G217400 chr6B 362870458 362872231 1773 True 1100.00 1293 97.79350 2731 4013 2 chr6B.!!$R5 1282
2 TraesCS6B01G217400 chr6A 223407929 223413375 5446 False 1824.75 3864 91.14900 189 6848 4 chr6A.!!$F2 6659
3 TraesCS6B01G217400 chr6A 77531825 77532465 640 False 496.00 496 80.98200 1 639 1 chr6A.!!$F1 638
4 TraesCS6B01G217400 chr6D 163128147 163132786 4639 False 1691.50 3860 94.13975 899 6848 4 chr6D.!!$F1 5949
5 TraesCS6B01G217400 chr7B 701475861 701477183 1322 False 2198.00 2198 96.90100 2731 4034 1 chr7B.!!$F3 1303
6 TraesCS6B01G217400 chr7B 414040051 414041370 1319 True 2074.00 2074 95.24200 2731 4034 1 chr7B.!!$R2 1303
7 TraesCS6B01G217400 chr2A 761202308 761203631 1323 True 2189.00 2189 96.75200 2731 4035 1 chr2A.!!$R1 1304
8 TraesCS6B01G217400 chr2B 567988531 567989844 1313 True 2174.00 2174 96.67400 2731 4034 1 chr2B.!!$R1 1303
9 TraesCS6B01G217400 chr2B 554089272 554090590 1318 False 2073.00 2073 95.23800 2731 4034 1 chr2B.!!$F3 1303
10 TraesCS6B01G217400 chr5B 640930951 640932263 1312 True 2045.00 2045 94.93200 2731 4033 1 chr5B.!!$R4 1302
11 TraesCS6B01G217400 chr1A 539591139 539592473 1334 False 921.00 1365 93.78100 2731 4030 2 chr1A.!!$F2 1299
12 TraesCS6B01G217400 chr1A 479288028 479289357 1329 False 906.00 1376 92.81700 2731 4034 2 chr1A.!!$F1 1303


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
856 952 0.034337 TGCCTCGTCACCCTGTAAAC 59.966 55.000 0.00 0.0 0.00 2.01 F
1750 1848 0.109781 CTGGATTTTGGTGCGTTCCG 60.110 55.000 0.00 0.0 0.00 4.30 F
1751 1849 0.535328 TGGATTTTGGTGCGTTCCGA 60.535 50.000 0.00 0.0 0.00 4.55 F
1766 1864 1.167851 TCCGATTTACTCGTCGTGGT 58.832 50.000 0.00 0.0 46.18 4.16 F
2057 2204 1.343176 GGGGAAGCTCTGGTAGGTACT 60.343 57.143 0.00 0.0 46.37 2.73 F
2484 2633 1.623686 ATGGTGGAAGGAGGGGCAT 60.624 57.895 0.00 0.0 0.00 4.40 F
4302 5004 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2269 2416 1.135689 CAGCGTGGGATACAACTTTGC 60.136 52.381 0.00 0.00 39.74 3.68 R
2617 2766 4.877823 CAGCTGGATGTAAGAAACTGCATA 59.122 41.667 5.57 0.00 0.00 3.14 R
2624 2773 6.382859 TGGTAGTATCAGCTGGATGTAAGAAA 59.617 38.462 15.13 0.00 36.72 2.52 R
2653 2802 6.825944 TGCACAACCAATGTATTAGCTTTA 57.174 33.333 0.00 0.00 41.46 1.85 R
4202 4897 3.562182 AGTCGAAACATCAACCCCTTTT 58.438 40.909 0.00 0.00 0.00 2.27 R
4363 5065 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30 R
5854 6668 0.249398 ACCGAGCACCATGTACCTTC 59.751 55.000 0.00 0.00 0.00 3.46 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.372997 TTGCTTCCGCTGACTCGTC 60.373 57.895 0.00 0.00 36.97 4.20
20 21 0.958876 TGCTTCCGCTGACTCGTCTA 60.959 55.000 0.00 0.00 36.97 2.59
22 23 1.862008 GCTTCCGCTGACTCGTCTATG 60.862 57.143 0.00 0.00 0.00 2.23
23 24 1.671328 CTTCCGCTGACTCGTCTATGA 59.329 52.381 0.00 0.00 0.00 2.15
69 70 2.629002 GCCCCTGGCGTGTAATATG 58.371 57.895 0.00 0.00 39.62 1.78
70 71 0.179029 GCCCCTGGCGTGTAATATGT 60.179 55.000 0.00 0.00 39.62 2.29
71 72 1.749286 GCCCCTGGCGTGTAATATGTT 60.749 52.381 0.00 0.00 39.62 2.71
80 81 5.204833 GGCGTGTAATATGTTGCTTGTATG 58.795 41.667 0.00 0.00 0.00 2.39
82 83 5.901884 GCGTGTAATATGTTGCTTGTATGAC 59.098 40.000 0.00 0.00 0.00 3.06
85 86 8.813282 CGTGTAATATGTTGCTTGTATGACTTA 58.187 33.333 0.00 0.00 0.00 2.24
129 130 2.036089 GTGATATCTTCCCGTGAGTCCC 59.964 54.545 3.98 0.00 0.00 4.46
147 148 2.357952 TCCCTGATCTTGATCGTACACG 59.642 50.000 6.19 0.00 41.45 4.49
169 170 4.088648 GTTTGCGTGCATGATTAGTGTAC 58.911 43.478 10.93 0.00 0.00 2.90
202 206 2.646719 GTCACACCGAGCCACGTA 59.353 61.111 0.00 0.00 40.78 3.57
205 209 1.006571 CACACCGAGCCACGTAGTT 60.007 57.895 0.00 0.00 41.61 2.24
224 228 2.562912 CGGCTTTGCATTGCTCGT 59.437 55.556 10.49 0.00 0.00 4.18
233 237 1.503542 CATTGCTCGTGAACAGGCC 59.496 57.895 0.00 0.00 0.00 5.19
339 343 1.803943 GTCGTCTGAGTCCATCGCT 59.196 57.895 0.00 0.00 0.00 4.93
351 355 1.159285 CCATCGCTGAGCAGACAAAA 58.841 50.000 4.88 0.00 0.00 2.44
365 369 1.657181 CAAAACGCCGAACACCTGC 60.657 57.895 0.00 0.00 0.00 4.85
367 371 3.767630 AAACGCCGAACACCTGCCT 62.768 57.895 0.00 0.00 0.00 4.75
368 372 4.681978 ACGCCGAACACCTGCCTC 62.682 66.667 0.00 0.00 0.00 4.70
370 374 4.681978 GCCGAACACCTGCCTCGT 62.682 66.667 0.00 0.00 0.00 4.18
371 375 2.432628 CCGAACACCTGCCTCGTC 60.433 66.667 0.00 0.00 0.00 4.20
379 383 3.314331 CTGCCTCGTCTGGTGGGT 61.314 66.667 0.00 0.00 0.00 4.51
427 432 1.959226 GACGAACCGCCAGAAAGCA 60.959 57.895 0.00 0.00 0.00 3.91
455 460 2.207924 GCGGGATGGAGGATACGGT 61.208 63.158 0.00 0.00 46.39 4.83
500 506 0.331616 AAAATGGCCTTCCTAGCGGT 59.668 50.000 3.32 0.00 0.00 5.68
555 561 2.594303 CGGAAAGGGCAGTGCACA 60.594 61.111 21.75 0.00 32.33 4.57
623 633 1.081108 GGCACATGCGCGGTTTTTA 60.081 52.632 8.83 0.00 43.26 1.52
629 639 1.199097 CATGCGCGGTTTTTACCTTCT 59.801 47.619 8.83 0.00 0.00 2.85
634 644 1.515081 CGGTTTTTACCTTCTGCCGA 58.485 50.000 0.00 0.00 40.04 5.54
639 649 0.322187 TTTACCTTCTGCCGAAGCCC 60.322 55.000 12.05 0.00 44.24 5.19
640 650 2.193087 TTACCTTCTGCCGAAGCCCC 62.193 60.000 12.05 0.00 44.24 5.80
695 791 4.204028 GGGGCTGTGTGTGTGGGT 62.204 66.667 0.00 0.00 0.00 4.51
697 793 2.124320 GGCTGTGTGTGTGGGTGT 60.124 61.111 0.00 0.00 0.00 4.16
698 794 2.480610 GGCTGTGTGTGTGGGTGTG 61.481 63.158 0.00 0.00 0.00 3.82
700 796 1.823470 CTGTGTGTGTGGGTGTGGG 60.823 63.158 0.00 0.00 0.00 4.61
702 798 3.814906 TGTGTGTGGGTGTGGGGG 61.815 66.667 0.00 0.00 0.00 5.40
717 813 3.728373 GGGGTGTCGAGGCCCAAT 61.728 66.667 21.63 0.00 46.59 3.16
720 816 0.182775 GGGTGTCGAGGCCCAATAAT 59.817 55.000 16.92 0.00 44.23 1.28
721 817 1.594331 GGTGTCGAGGCCCAATAATC 58.406 55.000 0.00 0.00 0.00 1.75
722 818 1.594331 GTGTCGAGGCCCAATAATCC 58.406 55.000 0.00 0.00 0.00 3.01
723 819 1.141053 GTGTCGAGGCCCAATAATCCT 59.859 52.381 0.00 0.00 0.00 3.24
725 821 2.367567 TGTCGAGGCCCAATAATCCTAC 59.632 50.000 0.00 0.00 0.00 3.18
727 823 2.367567 TCGAGGCCCAATAATCCTACAC 59.632 50.000 0.00 0.00 0.00 2.90
729 825 2.711547 GAGGCCCAATAATCCTACACCT 59.288 50.000 0.00 0.00 0.00 4.00
731 827 3.651423 AGGCCCAATAATCCTACACCTAC 59.349 47.826 0.00 0.00 0.00 3.18
733 829 4.505039 GGCCCAATAATCCTACACCTACAG 60.505 50.000 0.00 0.00 0.00 2.74
734 830 4.505039 GCCCAATAATCCTACACCTACAGG 60.505 50.000 0.00 0.00 42.17 4.00
735 831 4.505039 CCCAATAATCCTACACCTACAGGC 60.505 50.000 0.00 0.00 39.32 4.85
738 834 6.299141 CAATAATCCTACACCTACAGGCAAT 58.701 40.000 0.00 0.00 39.32 3.56
739 835 4.423625 AATCCTACACCTACAGGCAATC 57.576 45.455 0.00 0.00 39.32 2.67
741 837 3.178046 TCCTACACCTACAGGCAATCAA 58.822 45.455 0.00 0.00 39.32 2.57
742 838 3.055385 TCCTACACCTACAGGCAATCAAC 60.055 47.826 0.00 0.00 39.32 3.18
743 839 2.949177 ACACCTACAGGCAATCAACA 57.051 45.000 0.00 0.00 39.32 3.33
744 840 2.783135 ACACCTACAGGCAATCAACAG 58.217 47.619 0.00 0.00 39.32 3.16
747 843 2.375174 ACCTACAGGCAATCAACAGGAA 59.625 45.455 0.00 0.00 39.32 3.36
748 844 3.012518 CCTACAGGCAATCAACAGGAAG 58.987 50.000 0.00 0.00 0.00 3.46
750 846 2.949447 ACAGGCAATCAACAGGAAGTT 58.051 42.857 0.00 0.00 42.42 2.66
753 849 3.074412 AGGCAATCAACAGGAAGTTACG 58.926 45.455 0.00 0.00 38.74 3.18
754 850 2.161609 GGCAATCAACAGGAAGTTACGG 59.838 50.000 0.00 0.00 38.74 4.02
757 853 2.825861 TCAACAGGAAGTTACGGACC 57.174 50.000 0.00 0.00 38.74 4.46
758 854 2.322658 TCAACAGGAAGTTACGGACCT 58.677 47.619 0.00 0.00 38.74 3.85
760 856 1.264295 ACAGGAAGTTACGGACCTCC 58.736 55.000 0.00 1.70 38.89 4.30
762 858 0.412640 AGGAAGTTACGGACCTCCCT 59.587 55.000 5.51 0.00 39.34 4.20
763 859 1.203275 AGGAAGTTACGGACCTCCCTT 60.203 52.381 5.51 0.00 39.34 3.95
764 860 1.206610 GGAAGTTACGGACCTCCCTTC 59.793 57.143 0.00 0.00 33.43 3.46
765 861 2.177734 GAAGTTACGGACCTCCCTTCT 58.822 52.381 0.00 0.00 31.84 2.85
766 862 1.849977 AGTTACGGACCTCCCTTCTC 58.150 55.000 0.00 0.00 0.00 2.87
767 863 1.358445 AGTTACGGACCTCCCTTCTCT 59.642 52.381 0.00 0.00 0.00 3.10
768 864 2.177734 GTTACGGACCTCCCTTCTCTT 58.822 52.381 0.00 0.00 0.00 2.85
769 865 2.140839 TACGGACCTCCCTTCTCTTC 57.859 55.000 0.00 0.00 0.00 2.87
770 866 0.410270 ACGGACCTCCCTTCTCTTCT 59.590 55.000 0.00 0.00 0.00 2.85
771 867 1.639628 ACGGACCTCCCTTCTCTTCTA 59.360 52.381 0.00 0.00 0.00 2.10
772 868 2.042706 ACGGACCTCCCTTCTCTTCTAA 59.957 50.000 0.00 0.00 0.00 2.10
773 869 3.301274 CGGACCTCCCTTCTCTTCTAAT 58.699 50.000 0.00 0.00 0.00 1.73
774 870 3.319689 CGGACCTCCCTTCTCTTCTAATC 59.680 52.174 0.00 0.00 0.00 1.75
775 871 4.290942 GGACCTCCCTTCTCTTCTAATCA 58.709 47.826 0.00 0.00 0.00 2.57
776 872 4.904853 GGACCTCCCTTCTCTTCTAATCAT 59.095 45.833 0.00 0.00 0.00 2.45
777 873 6.078664 GGACCTCCCTTCTCTTCTAATCATA 58.921 44.000 0.00 0.00 0.00 2.15
778 874 6.014925 GGACCTCCCTTCTCTTCTAATCATAC 60.015 46.154 0.00 0.00 0.00 2.39
779 875 5.841783 ACCTCCCTTCTCTTCTAATCATACC 59.158 44.000 0.00 0.00 0.00 2.73
780 876 6.081356 CCTCCCTTCTCTTCTAATCATACCT 58.919 44.000 0.00 0.00 0.00 3.08
781 877 6.210584 CCTCCCTTCTCTTCTAATCATACCTC 59.789 46.154 0.00 0.00 0.00 3.85
782 878 6.078664 TCCCTTCTCTTCTAATCATACCTCC 58.921 44.000 0.00 0.00 0.00 4.30
783 879 5.047660 CCCTTCTCTTCTAATCATACCTCCG 60.048 48.000 0.00 0.00 0.00 4.63
784 880 5.455056 TTCTCTTCTAATCATACCTCCGC 57.545 43.478 0.00 0.00 0.00 5.54
785 881 3.827302 TCTCTTCTAATCATACCTCCGCC 59.173 47.826 0.00 0.00 0.00 6.13
786 882 2.897969 TCTTCTAATCATACCTCCGCCC 59.102 50.000 0.00 0.00 0.00 6.13
787 883 1.640917 TCTAATCATACCTCCGCCCC 58.359 55.000 0.00 0.00 0.00 5.80
788 884 0.613777 CTAATCATACCTCCGCCCCC 59.386 60.000 0.00 0.00 0.00 5.40
789 885 0.192566 TAATCATACCTCCGCCCCCT 59.807 55.000 0.00 0.00 0.00 4.79
790 886 1.418908 AATCATACCTCCGCCCCCTG 61.419 60.000 0.00 0.00 0.00 4.45
791 887 2.326529 ATCATACCTCCGCCCCCTGA 62.327 60.000 0.00 0.00 0.00 3.86
792 888 1.843376 CATACCTCCGCCCCCTGAT 60.843 63.158 0.00 0.00 0.00 2.90
793 889 1.073706 ATACCTCCGCCCCCTGATT 60.074 57.895 0.00 0.00 0.00 2.57
794 890 0.697854 ATACCTCCGCCCCCTGATTT 60.698 55.000 0.00 0.00 0.00 2.17
795 891 0.917333 TACCTCCGCCCCCTGATTTT 60.917 55.000 0.00 0.00 0.00 1.82
796 892 1.453928 CCTCCGCCCCCTGATTTTC 60.454 63.158 0.00 0.00 0.00 2.29
797 893 1.302949 CTCCGCCCCCTGATTTTCA 59.697 57.895 0.00 0.00 0.00 2.69
798 894 0.749454 CTCCGCCCCCTGATTTTCAG 60.749 60.000 0.00 0.00 43.91 3.02
807 903 1.839424 CTGATTTTCAGGGGTGGACC 58.161 55.000 0.00 0.00 40.71 4.46
808 904 0.037590 TGATTTTCAGGGGTGGACCG 59.962 55.000 0.00 0.00 41.60 4.79
809 905 0.679960 GATTTTCAGGGGTGGACCGG 60.680 60.000 0.00 0.00 41.60 5.28
810 906 1.432023 ATTTTCAGGGGTGGACCGGT 61.432 55.000 6.92 6.92 41.60 5.28
811 907 2.346284 TTTTCAGGGGTGGACCGGTG 62.346 60.000 14.63 0.00 41.60 4.94
820 916 3.961414 GGACCGGTGCCTCCCAAA 61.961 66.667 14.63 0.00 0.00 3.28
821 917 2.355115 GACCGGTGCCTCCCAAAT 59.645 61.111 14.63 0.00 0.00 2.32
822 918 1.304134 GACCGGTGCCTCCCAAATT 60.304 57.895 14.63 0.00 0.00 1.82
823 919 1.595093 GACCGGTGCCTCCCAAATTG 61.595 60.000 14.63 0.00 0.00 2.32
824 920 1.304052 CCGGTGCCTCCCAAATTGA 60.304 57.895 0.00 0.00 0.00 2.57
825 921 1.595093 CCGGTGCCTCCCAAATTGAC 61.595 60.000 0.00 0.00 0.00 3.18
826 922 1.595093 CGGTGCCTCCCAAATTGACC 61.595 60.000 0.00 0.00 0.00 4.02
827 923 0.541764 GGTGCCTCCCAAATTGACCA 60.542 55.000 0.00 0.00 0.00 4.02
828 924 1.337118 GTGCCTCCCAAATTGACCAA 58.663 50.000 0.00 0.00 0.00 3.67
829 925 1.901833 GTGCCTCCCAAATTGACCAAT 59.098 47.619 0.00 0.00 0.00 3.16
830 926 1.901159 TGCCTCCCAAATTGACCAATG 59.099 47.619 0.00 0.00 0.00 2.82
831 927 2.178580 GCCTCCCAAATTGACCAATGA 58.821 47.619 0.00 0.00 0.00 2.57
832 928 2.566724 GCCTCCCAAATTGACCAATGAA 59.433 45.455 0.00 0.00 0.00 2.57
833 929 3.007831 GCCTCCCAAATTGACCAATGAAA 59.992 43.478 0.00 0.00 0.00 2.69
834 930 4.824289 CCTCCCAAATTGACCAATGAAAG 58.176 43.478 0.00 0.00 0.00 2.62
835 931 4.527816 CCTCCCAAATTGACCAATGAAAGA 59.472 41.667 0.00 0.00 0.00 2.52
836 932 5.011943 CCTCCCAAATTGACCAATGAAAGAA 59.988 40.000 0.00 0.00 0.00 2.52
837 933 6.296030 CCTCCCAAATTGACCAATGAAAGAAT 60.296 38.462 0.00 0.00 0.00 2.40
838 934 6.465948 TCCCAAATTGACCAATGAAAGAATG 58.534 36.000 0.00 0.00 0.00 2.67
839 935 5.122711 CCCAAATTGACCAATGAAAGAATGC 59.877 40.000 0.00 0.00 0.00 3.56
840 936 5.122711 CCAAATTGACCAATGAAAGAATGCC 59.877 40.000 0.00 0.00 0.00 4.40
841 937 5.750352 AATTGACCAATGAAAGAATGCCT 57.250 34.783 0.00 0.00 0.00 4.75
842 938 4.789012 TTGACCAATGAAAGAATGCCTC 57.211 40.909 0.00 0.00 0.00 4.70
843 939 2.749076 TGACCAATGAAAGAATGCCTCG 59.251 45.455 0.00 0.00 0.00 4.63
844 940 2.749621 GACCAATGAAAGAATGCCTCGT 59.250 45.455 0.00 0.00 0.00 4.18
845 941 2.749621 ACCAATGAAAGAATGCCTCGTC 59.250 45.455 0.00 0.00 0.00 4.20
846 942 2.749076 CCAATGAAAGAATGCCTCGTCA 59.251 45.455 0.00 0.00 0.00 4.35
847 943 3.426695 CCAATGAAAGAATGCCTCGTCAC 60.427 47.826 0.00 0.00 0.00 3.67
848 944 1.808411 TGAAAGAATGCCTCGTCACC 58.192 50.000 0.00 0.00 0.00 4.02
849 945 1.087501 GAAAGAATGCCTCGTCACCC 58.912 55.000 0.00 0.00 0.00 4.61
850 946 0.693049 AAAGAATGCCTCGTCACCCT 59.307 50.000 0.00 0.00 0.00 4.34
851 947 0.036010 AAGAATGCCTCGTCACCCTG 60.036 55.000 0.00 0.00 0.00 4.45
852 948 1.194781 AGAATGCCTCGTCACCCTGT 61.195 55.000 0.00 0.00 0.00 4.00
853 949 0.535335 GAATGCCTCGTCACCCTGTA 59.465 55.000 0.00 0.00 0.00 2.74
854 950 0.981183 AATGCCTCGTCACCCTGTAA 59.019 50.000 0.00 0.00 0.00 2.41
855 951 0.981183 ATGCCTCGTCACCCTGTAAA 59.019 50.000 0.00 0.00 0.00 2.01
856 952 0.034337 TGCCTCGTCACCCTGTAAAC 59.966 55.000 0.00 0.00 0.00 2.01
857 953 0.672711 GCCTCGTCACCCTGTAAACC 60.673 60.000 0.00 0.00 0.00 3.27
858 954 0.682852 CCTCGTCACCCTGTAAACCA 59.317 55.000 0.00 0.00 0.00 3.67
859 955 1.607251 CCTCGTCACCCTGTAAACCAC 60.607 57.143 0.00 0.00 0.00 4.16
860 956 1.343465 CTCGTCACCCTGTAAACCACT 59.657 52.381 0.00 0.00 0.00 4.00
861 957 1.342174 TCGTCACCCTGTAAACCACTC 59.658 52.381 0.00 0.00 0.00 3.51
862 958 1.343465 CGTCACCCTGTAAACCACTCT 59.657 52.381 0.00 0.00 0.00 3.24
863 959 2.609737 CGTCACCCTGTAAACCACTCTC 60.610 54.545 0.00 0.00 0.00 3.20
864 960 1.975680 TCACCCTGTAAACCACTCTCC 59.024 52.381 0.00 0.00 0.00 3.71
865 961 1.003233 CACCCTGTAAACCACTCTCCC 59.997 57.143 0.00 0.00 0.00 4.30
866 962 0.618981 CCCTGTAAACCACTCTCCCC 59.381 60.000 0.00 0.00 0.00 4.81
867 963 0.618981 CCTGTAAACCACTCTCCCCC 59.381 60.000 0.00 0.00 0.00 5.40
868 964 0.249398 CTGTAAACCACTCTCCCCCG 59.751 60.000 0.00 0.00 0.00 5.73
869 965 0.472352 TGTAAACCACTCTCCCCCGT 60.472 55.000 0.00 0.00 0.00 5.28
870 966 1.203162 TGTAAACCACTCTCCCCCGTA 60.203 52.381 0.00 0.00 0.00 4.02
871 967 1.901833 GTAAACCACTCTCCCCCGTAA 59.098 52.381 0.00 0.00 0.00 3.18
872 968 1.665137 AAACCACTCTCCCCCGTAAT 58.335 50.000 0.00 0.00 0.00 1.89
873 969 1.665137 AACCACTCTCCCCCGTAATT 58.335 50.000 0.00 0.00 0.00 1.40
874 970 1.665137 ACCACTCTCCCCCGTAATTT 58.335 50.000 0.00 0.00 0.00 1.82
875 971 1.558294 ACCACTCTCCCCCGTAATTTC 59.442 52.381 0.00 0.00 0.00 2.17
876 972 1.134189 CCACTCTCCCCCGTAATTTCC 60.134 57.143 0.00 0.00 0.00 3.13
877 973 1.838077 CACTCTCCCCCGTAATTTCCT 59.162 52.381 0.00 0.00 0.00 3.36
878 974 1.838077 ACTCTCCCCCGTAATTTCCTG 59.162 52.381 0.00 0.00 0.00 3.86
879 975 1.838077 CTCTCCCCCGTAATTTCCTGT 59.162 52.381 0.00 0.00 0.00 4.00
880 976 3.036091 CTCTCCCCCGTAATTTCCTGTA 58.964 50.000 0.00 0.00 0.00 2.74
881 977 3.036091 TCTCCCCCGTAATTTCCTGTAG 58.964 50.000 0.00 0.00 0.00 2.74
882 978 3.036091 CTCCCCCGTAATTTCCTGTAGA 58.964 50.000 0.00 0.00 0.00 2.59
883 979 3.646637 CTCCCCCGTAATTTCCTGTAGAT 59.353 47.826 0.00 0.00 0.00 1.98
884 980 3.389983 TCCCCCGTAATTTCCTGTAGATG 59.610 47.826 0.00 0.00 0.00 2.90
885 981 3.135895 CCCCCGTAATTTCCTGTAGATGT 59.864 47.826 0.00 0.00 0.00 3.06
886 982 4.345837 CCCCCGTAATTTCCTGTAGATGTA 59.654 45.833 0.00 0.00 0.00 2.29
887 983 5.510861 CCCCCGTAATTTCCTGTAGATGTAG 60.511 48.000 0.00 0.00 0.00 2.74
888 984 4.989168 CCCGTAATTTCCTGTAGATGTAGC 59.011 45.833 0.00 0.00 0.00 3.58
889 985 5.452776 CCCGTAATTTCCTGTAGATGTAGCA 60.453 44.000 0.00 0.00 0.00 3.49
890 986 6.223852 CCGTAATTTCCTGTAGATGTAGCAT 58.776 40.000 0.00 0.00 0.00 3.79
891 987 6.706270 CCGTAATTTCCTGTAGATGTAGCATT 59.294 38.462 0.00 0.00 0.00 3.56
892 988 7.870954 CCGTAATTTCCTGTAGATGTAGCATTA 59.129 37.037 0.00 0.00 0.00 1.90
893 989 8.700644 CGTAATTTCCTGTAGATGTAGCATTAC 58.299 37.037 0.00 0.00 0.00 1.89
894 990 9.765795 GTAATTTCCTGTAGATGTAGCATTACT 57.234 33.333 0.00 0.00 0.00 2.24
895 991 8.668510 AATTTCCTGTAGATGTAGCATTACTG 57.331 34.615 0.00 0.00 0.00 2.74
896 992 5.791336 TCCTGTAGATGTAGCATTACTGG 57.209 43.478 13.91 13.91 36.82 4.00
897 993 5.208890 TCCTGTAGATGTAGCATTACTGGT 58.791 41.667 16.50 0.00 36.82 4.00
919 1015 1.971695 GGCCCCGAGACAAGTTTGG 60.972 63.158 0.00 0.00 0.00 3.28
955 1051 5.049405 TCTCAAAGCGAAGAAAGAAACATCC 60.049 40.000 0.00 0.00 0.00 3.51
985 1082 2.357792 CGAGAGAAGCGCTCAAGTG 58.642 57.895 12.06 0.00 46.45 3.16
1005 1102 4.451150 GACTCGTCGGCCATGGCA 62.451 66.667 36.56 16.33 44.11 4.92
1059 1156 3.048602 CCAACCGTCGTCCTGACT 58.951 61.111 0.00 0.00 45.87 3.41
1110 1207 2.292587 CCTCTTCCTCCTAGTCCACCTT 60.293 54.545 0.00 0.00 0.00 3.50
1413 1510 0.815734 TCTTCCCCAAGATCGACGTC 59.184 55.000 5.18 5.18 33.38 4.34
1621 1718 4.248691 TGTCTATGATTCGAGCTCATGG 57.751 45.455 15.40 15.82 35.12 3.66
1683 1781 3.572255 TGCGCCTAATCAGGAAAAAGTTT 59.428 39.130 4.18 0.00 45.91 2.66
1684 1782 4.762765 TGCGCCTAATCAGGAAAAAGTTTA 59.237 37.500 4.18 0.00 45.91 2.01
1745 1843 0.883833 AAGCTCTGGATTTTGGTGCG 59.116 50.000 0.00 0.00 0.00 5.34
1746 1844 0.250901 AGCTCTGGATTTTGGTGCGT 60.251 50.000 0.00 0.00 0.00 5.24
1748 1846 1.401539 GCTCTGGATTTTGGTGCGTTC 60.402 52.381 0.00 0.00 0.00 3.95
1749 1847 1.200020 CTCTGGATTTTGGTGCGTTCC 59.800 52.381 0.00 0.00 0.00 3.62
1750 1848 0.109781 CTGGATTTTGGTGCGTTCCG 60.110 55.000 0.00 0.00 0.00 4.30
1751 1849 0.535328 TGGATTTTGGTGCGTTCCGA 60.535 50.000 0.00 0.00 0.00 4.55
1753 1851 1.201414 GGATTTTGGTGCGTTCCGATT 59.799 47.619 0.00 0.00 0.00 3.34
1754 1852 2.352323 GGATTTTGGTGCGTTCCGATTT 60.352 45.455 0.00 0.00 0.00 2.17
1755 1853 3.119779 GGATTTTGGTGCGTTCCGATTTA 60.120 43.478 0.00 0.00 0.00 1.40
1757 1855 2.172851 TTGGTGCGTTCCGATTTACT 57.827 45.000 0.00 0.00 0.00 2.24
1760 1858 1.343506 GTGCGTTCCGATTTACTCGT 58.656 50.000 0.00 0.00 46.18 4.18
1764 1862 1.576246 CGTTCCGATTTACTCGTCGTG 59.424 52.381 0.00 0.00 46.18 4.35
1765 1863 1.916000 GTTCCGATTTACTCGTCGTGG 59.084 52.381 0.00 0.00 46.18 4.94
1766 1864 1.167851 TCCGATTTACTCGTCGTGGT 58.832 50.000 0.00 0.00 46.18 4.16
1767 1865 1.541147 TCCGATTTACTCGTCGTGGTT 59.459 47.619 0.00 0.00 46.18 3.67
1769 1867 2.733026 CCGATTTACTCGTCGTGGTTTT 59.267 45.455 0.00 0.00 46.18 2.43
1771 1869 4.030977 CCGATTTACTCGTCGTGGTTTTAG 59.969 45.833 0.00 0.00 46.18 1.85
1772 1870 4.618489 CGATTTACTCGTCGTGGTTTTAGT 59.382 41.667 0.00 0.00 42.56 2.24
1773 1871 5.117592 CGATTTACTCGTCGTGGTTTTAGTT 59.882 40.000 0.00 0.00 42.56 2.24
1774 1872 5.888412 TTTACTCGTCGTGGTTTTAGTTC 57.112 39.130 0.00 0.00 0.00 3.01
1776 1874 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
1779 1877 5.295045 ACTCGTCGTGGTTTTAGTTCAAATT 59.705 36.000 0.00 0.00 0.00 1.82
1780 1878 6.121613 TCGTCGTGGTTTTAGTTCAAATTT 57.878 33.333 0.00 0.00 0.00 1.82
1781 1879 5.966503 TCGTCGTGGTTTTAGTTCAAATTTG 59.033 36.000 12.15 12.15 0.00 2.32
1782 1880 5.966503 CGTCGTGGTTTTAGTTCAAATTTGA 59.033 36.000 16.91 16.91 34.92 2.69
1783 1881 6.469595 CGTCGTGGTTTTAGTTCAAATTTGAA 59.530 34.615 26.01 26.01 44.31 2.69
1796 1894 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
1797 1895 5.966503 TCAAATTTGAACTAAAACCACGACG 59.033 36.000 18.45 0.00 33.55 5.12
1801 1899 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
1804 1902 5.984926 TGAACTAAAACCACGACGAGTAAAT 59.015 36.000 0.00 0.00 0.00 1.40
1805 1903 6.144402 TGAACTAAAACCACGACGAGTAAATC 59.856 38.462 0.00 0.00 0.00 2.17
1832 1946 4.141914 ACGGAGGGAGTATTTGATTCAGAC 60.142 45.833 0.00 0.00 0.00 3.51
1878 2001 4.612264 ATGAATGCAGCCTTCAAAAAGT 57.388 36.364 16.02 0.00 36.30 2.66
1911 2034 3.545724 CAGCTCATGCCTGTTCTCA 57.454 52.632 5.37 0.00 40.80 3.27
1912 2035 1.817357 CAGCTCATGCCTGTTCTCAA 58.183 50.000 5.37 0.00 40.80 3.02
1913 2036 2.366533 CAGCTCATGCCTGTTCTCAAT 58.633 47.619 5.37 0.00 40.80 2.57
1974 2100 6.809196 CAGTCCTGACTACATTTAACTCACTC 59.191 42.308 0.00 0.00 40.20 3.51
2043 2190 4.461081 TCAAATTGACCGTATTTGGGGAAG 59.539 41.667 0.00 0.00 41.24 3.46
2057 2204 1.343176 GGGGAAGCTCTGGTAGGTACT 60.343 57.143 0.00 0.00 46.37 2.73
2058 2205 2.091444 GGGGAAGCTCTGGTAGGTACTA 60.091 54.545 0.00 0.00 41.75 1.82
2109 2256 5.794687 TTCTAATGTTTGTGAGCATACCG 57.205 39.130 0.00 0.00 0.00 4.02
2174 2321 4.339247 AGTTCTCAATGTGTTTCCTGGTTG 59.661 41.667 0.00 0.00 0.00 3.77
2188 2335 8.266473 TGTTTCCTGGTTGAACTAGTAAACTTA 58.734 33.333 22.92 8.07 36.79 2.24
2198 2345 8.758633 TGAACTAGTAAACTTAGAGCATTCAC 57.241 34.615 0.00 0.00 0.00 3.18
2250 2397 8.159447 TGCATATAGATCCAGCTTGAATAGTTT 58.841 33.333 0.00 0.00 0.00 2.66
2251 2398 9.007901 GCATATAGATCCAGCTTGAATAGTTTT 57.992 33.333 0.00 0.00 0.00 2.43
2256 2403 8.499403 AGATCCAGCTTGAATAGTTTTAGTTC 57.501 34.615 0.00 0.00 0.00 3.01
2257 2404 7.554476 AGATCCAGCTTGAATAGTTTTAGTTCC 59.446 37.037 0.00 0.00 0.00 3.62
2258 2405 5.944007 TCCAGCTTGAATAGTTTTAGTTCCC 59.056 40.000 0.00 0.00 0.00 3.97
2260 2407 6.378280 CCAGCTTGAATAGTTTTAGTTCCCAT 59.622 38.462 0.00 0.00 0.00 4.00
2261 2408 7.253422 CAGCTTGAATAGTTTTAGTTCCCATG 58.747 38.462 0.00 0.00 0.00 3.66
2262 2409 6.948309 AGCTTGAATAGTTTTAGTTCCCATGT 59.052 34.615 0.00 0.00 0.00 3.21
2263 2410 8.107095 AGCTTGAATAGTTTTAGTTCCCATGTA 58.893 33.333 0.00 0.00 0.00 2.29
2264 2411 8.398665 GCTTGAATAGTTTTAGTTCCCATGTAG 58.601 37.037 0.00 0.00 0.00 2.74
2265 2412 8.801882 TTGAATAGTTTTAGTTCCCATGTAGG 57.198 34.615 0.00 0.00 37.03 3.18
2269 2416 9.901172 AATAGTTTTAGTTCCCATGTAGGTTAG 57.099 33.333 0.00 0.00 34.66 2.34
2282 2429 6.038271 CCATGTAGGTTAGCAAAGTTGTATCC 59.962 42.308 0.00 0.00 0.00 2.59
2286 2433 3.126343 GGTTAGCAAAGTTGTATCCCACG 59.874 47.826 0.00 0.00 0.00 4.94
2329 2478 2.236893 TCATGTGTGCCTATCAAGCTCA 59.763 45.455 0.00 0.00 0.00 4.26
2332 2481 4.063998 TGTGTGCCTATCAAGCTCATAG 57.936 45.455 5.88 5.88 36.28 2.23
2343 2492 6.658188 ATCAAGCTCATAGTAAGTAGGTCC 57.342 41.667 0.00 0.00 0.00 4.46
2365 2514 3.689161 CAGCATCCTTTGATAAACCGTGA 59.311 43.478 0.00 0.00 0.00 4.35
2371 2520 5.183228 TCCTTTGATAAACCGTGATCTTCC 58.817 41.667 0.00 0.00 0.00 3.46
2393 2542 4.439153 CCACTACCAAATGATCACATGTGC 60.439 45.833 21.38 8.71 39.63 4.57
2400 2549 1.655484 TGATCACATGTGCGCCTTAG 58.345 50.000 21.38 0.00 0.00 2.18
2484 2633 1.623686 ATGGTGGAAGGAGGGGCAT 60.624 57.895 0.00 0.00 0.00 4.40
2505 2654 6.025749 CATTTCAATGCTGCTGATATGGAT 57.974 37.500 11.73 0.00 32.06 3.41
2579 2728 4.348168 TGACCTCCTTTAGCTTCTGAAGTT 59.652 41.667 17.97 14.77 0.00 2.66
2584 2733 6.352222 CCTCCTTTAGCTTCTGAAGTTCCATA 60.352 42.308 17.97 2.72 0.00 2.74
2617 2766 7.200434 ACCTATGATTTACCTGATTCACTGT 57.800 36.000 0.00 0.00 0.00 3.55
2653 2802 3.116096 TCCAGCTGATACTACCAACCT 57.884 47.619 17.39 0.00 0.00 3.50
2708 2857 3.117888 TCAGGTGCTTCTTTTCTCCAACT 60.118 43.478 0.00 0.00 0.00 3.16
3077 3271 2.048023 CGACCTACAGCCACCGGTA 61.048 63.158 6.87 0.00 0.00 4.02
3420 4112 2.290287 CCATGGACGACACCCTCCA 61.290 63.158 5.56 0.00 40.92 3.86
4211 4906 4.232820 ACCATGGATCATAGAAAAGGGGTT 59.767 41.667 21.47 0.00 0.00 4.11
4214 4909 5.732331 TGGATCATAGAAAAGGGGTTGAT 57.268 39.130 0.00 0.00 0.00 2.57
4215 4910 5.448654 TGGATCATAGAAAAGGGGTTGATG 58.551 41.667 0.00 0.00 0.00 3.07
4219 4914 6.834168 TCATAGAAAAGGGGTTGATGTTTC 57.166 37.500 0.00 0.00 0.00 2.78
4286 4988 1.414181 CTGCATGATACTCCCTCCGTT 59.586 52.381 0.00 0.00 0.00 4.44
4292 4994 1.962100 GATACTCCCTCCGTTCGGAAT 59.038 52.381 14.79 4.68 33.41 3.01
4301 5003 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
4302 5004 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
4311 5013 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
4323 5025 5.301805 TCGCAGAAATGGATGTATCTAGACA 59.698 40.000 0.00 0.00 0.00 3.41
4354 5056 9.529325 TTAGTTCTACATACATTCATTTCCGAG 57.471 33.333 0.00 0.00 0.00 4.63
4355 5057 7.782049 AGTTCTACATACATTCATTTCCGAGA 58.218 34.615 0.00 0.00 0.00 4.04
4357 5059 7.107639 TCTACATACATTCATTTCCGAGACA 57.892 36.000 0.00 0.00 0.00 3.41
4360 5062 6.173339 ACATACATTCATTTCCGAGACAAGT 58.827 36.000 0.00 0.00 0.00 3.16
4361 5063 7.327975 ACATACATTCATTTCCGAGACAAGTA 58.672 34.615 0.00 0.00 0.00 2.24
4362 5064 7.822334 ACATACATTCATTTCCGAGACAAGTAA 59.178 33.333 0.00 0.00 0.00 2.24
4363 5065 8.830580 CATACATTCATTTCCGAGACAAGTAAT 58.169 33.333 0.00 0.00 0.00 1.89
4364 5066 7.687941 ACATTCATTTCCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
4365 5067 7.752695 ACATTCATTTCCGAGACAAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
4366 5068 6.737254 TTCATTTCCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
4367 5069 4.868171 TCATTTCCGAGACAAGTAATTCCG 59.132 41.667 0.00 0.00 0.00 4.30
4368 5070 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
4369 5071 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
4370 5072 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
4371 5073 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
4372 5074 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
4373 5075 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
4374 5076 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
4375 5077 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
4376 5078 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
4377 5079 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
4378 5080 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4379 5081 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
4380 5082 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
4381 5083 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
4382 5084 0.038744 TTCCGAACGGAGGGAGTACT 59.961 55.000 15.34 0.00 46.06 2.73
4383 5085 0.911769 TCCGAACGGAGGGAGTACTA 59.088 55.000 12.04 0.00 39.76 1.82
4384 5086 1.020437 CCGAACGGAGGGAGTACTAC 58.980 60.000 7.53 0.00 37.50 2.73
4385 5087 1.679944 CCGAACGGAGGGAGTACTACA 60.680 57.143 7.57 0.00 37.50 2.74
4396 5098 7.230108 CGGAGGGAGTACTACATATGAGTTTTA 59.770 40.741 10.38 0.00 0.00 1.52
4401 5103 8.414778 GGAGTACTACATATGAGTTTTAGTGCT 58.585 37.037 15.96 15.96 38.11 4.40
4465 5273 2.892215 TCAAACAGCTGCATGGAATTCA 59.108 40.909 15.27 0.00 0.00 2.57
4555 5367 2.722094 TGTGCCCAAAGTAGCTTATGG 58.278 47.619 0.00 0.00 0.00 2.74
4643 5455 5.239525 GCTGTTATTTGGCTCCTATAGTTGG 59.760 44.000 0.00 0.00 0.00 3.77
4736 5548 6.461788 GGCTAACTTGTCATGGTTTTGGTTAA 60.462 38.462 0.00 0.00 0.00 2.01
4753 5565 5.329399 TGGTTAAGCACTTTGGGTATCAAT 58.671 37.500 2.54 0.00 34.98 2.57
4806 5618 9.674824 ACTCTGAATTCGGTTTATTACGTATAG 57.325 33.333 13.95 2.26 0.00 1.31
5026 5838 5.221126 GGTGATCCAGGCTGAAATGTTTATC 60.221 44.000 17.94 6.18 0.00 1.75
5142 5955 8.842280 TGTAAGATCGGTTTTTGTTGACTATTT 58.158 29.630 0.00 0.00 0.00 1.40
5278 6091 1.134699 TCTGATGCACCGGCTAGAAAG 60.135 52.381 0.00 0.00 41.91 2.62
5388 6201 0.687354 TGAGTCTGAGTTTGGAGGCC 59.313 55.000 0.00 0.00 0.00 5.19
5412 6225 3.503748 CCTCCTTTCTGTAGGCTTTTGTG 59.496 47.826 0.00 0.00 35.15 3.33
5588 6401 6.597280 GCTGTCAGAATTGTCCTCTAGATTTT 59.403 38.462 3.32 0.00 0.00 1.82
5649 6462 5.977635 TCGATACATTCTGTCAACTCCAAT 58.022 37.500 0.00 0.00 0.00 3.16
5686 6499 8.621532 AGTAATTCTGCAGTATGTTTCTCAAA 57.378 30.769 14.67 0.00 39.31 2.69
5748 6562 3.625764 TGTAGGCTGACACAAACAAAGAC 59.374 43.478 0.00 0.00 0.00 3.01
5754 6568 3.075148 TGACACAAACAAAGACGGACAA 58.925 40.909 0.00 0.00 0.00 3.18
5854 6668 0.179134 CGAGCTCCGGTAGTTCCTTG 60.179 60.000 8.47 0.00 32.05 3.61
5862 6676 2.564062 CCGGTAGTTCCTTGAAGGTACA 59.436 50.000 20.78 6.44 38.04 2.90
5879 6693 1.327690 ACATGGTGCTCGGTATCGGT 61.328 55.000 0.00 0.00 36.95 4.69
5942 6756 5.793817 TGAGCTTGAATGTTTAGCAGTAGA 58.206 37.500 0.00 0.00 37.37 2.59
6350 7181 1.783250 AAGGTGCAGCTGTAGGGCTT 61.783 55.000 20.97 0.00 41.00 4.35
6351 7182 2.042831 GGTGCAGCTGTAGGGCTTG 61.043 63.158 16.64 0.00 41.00 4.01
6352 7183 1.302832 GTGCAGCTGTAGGGCTTGT 60.303 57.895 16.64 0.00 41.00 3.16
6353 7184 0.036388 GTGCAGCTGTAGGGCTTGTA 60.036 55.000 16.64 0.00 41.00 2.41
6453 7288 1.710013 TCCTTCTCGTGCGACATTTC 58.290 50.000 0.00 0.00 0.00 2.17
6680 7527 7.288810 TCCGAAAGTAAGTGGTTCTAGTTTA 57.711 36.000 0.00 0.00 0.00 2.01
6800 7657 4.619973 AGAATTGCTTGCATTTTCGAACA 58.380 34.783 0.00 0.00 0.00 3.18
6801 7658 4.682860 AGAATTGCTTGCATTTTCGAACAG 59.317 37.500 0.00 0.00 0.00 3.16
6802 7659 3.706802 TTGCTTGCATTTTCGAACAGA 57.293 38.095 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.399087 CGATCATAGACGAGTCAGCGG 60.399 57.143 5.99 0.00 35.12 5.52
16 17 5.340932 CGAATACAAGTGCTCGATCATAGAC 59.659 44.000 0.00 0.00 33.13 2.59
18 19 5.452777 TCGAATACAAGTGCTCGATCATAG 58.547 41.667 0.00 0.00 35.52 2.23
20 21 4.294232 CTCGAATACAAGTGCTCGATCAT 58.706 43.478 8.31 0.00 39.39 2.45
22 23 2.469516 GCTCGAATACAAGTGCTCGATC 59.530 50.000 8.31 2.80 39.39 3.69
23 24 2.464865 GCTCGAATACAAGTGCTCGAT 58.535 47.619 8.31 0.00 39.39 3.59
93 94 8.999431 GGAAGATATCACAACACAACTCTTAAA 58.001 33.333 5.32 0.00 0.00 1.52
95 96 7.103641 GGGAAGATATCACAACACAACTCTTA 58.896 38.462 5.32 0.00 0.00 2.10
96 97 5.940470 GGGAAGATATCACAACACAACTCTT 59.060 40.000 5.32 0.00 0.00 2.85
129 130 4.490959 GCAAACGTGTACGATCAAGATCAG 60.491 45.833 11.79 5.82 43.02 2.90
147 148 3.201726 ACACTAATCATGCACGCAAAC 57.798 42.857 0.00 0.00 0.00 2.93
200 204 1.339711 CAATGCAAAGCCGCAACTAC 58.660 50.000 0.00 0.00 46.87 2.73
202 206 1.665599 GCAATGCAAAGCCGCAACT 60.666 52.632 0.00 0.00 46.87 3.16
204 208 1.373246 GAGCAATGCAAAGCCGCAA 60.373 52.632 8.35 0.00 46.87 4.85
339 343 0.812014 TTCGGCGTTTTGTCTGCTCA 60.812 50.000 6.85 0.00 0.00 4.26
351 355 4.681978 GAGGCAGGTGTTCGGCGT 62.682 66.667 6.85 0.00 37.44 5.68
365 369 4.742201 CGCACCCACCAGACGAGG 62.742 72.222 0.00 0.00 0.00 4.63
410 415 2.110213 TGCTTTCTGGCGGTTCGT 59.890 55.556 0.00 0.00 34.52 3.85
415 420 3.950794 TAGGCGTGCTTTCTGGCGG 62.951 63.158 0.00 0.00 34.52 6.13
420 425 1.219393 GCTCCTAGGCGTGCTTTCT 59.781 57.895 2.96 0.00 0.00 2.52
432 437 1.081481 TATCCTCCATCCCGCTCCTA 58.919 55.000 0.00 0.00 0.00 2.94
468 474 2.289133 GGCCATTTTCCTGCCGTAAAAA 60.289 45.455 0.00 0.00 35.08 1.94
562 568 1.851021 TTTTGCACGTCCAGCATCGG 61.851 55.000 0.00 0.00 42.33 4.18
594 604 1.951510 CATGTGCCACCACTGTCAC 59.048 57.895 0.00 0.00 42.54 3.67
608 618 0.955905 AAGGTAAAAACCGCGCATGT 59.044 45.000 8.75 0.00 34.28 3.21
642 652 4.326766 CGGCGCCCACAAACACTG 62.327 66.667 23.46 0.00 0.00 3.66
678 774 4.204028 ACCCACACACACAGCCCC 62.204 66.667 0.00 0.00 0.00 5.80
679 775 2.906897 CACCCACACACACAGCCC 60.907 66.667 0.00 0.00 0.00 5.19
682 778 1.823470 CCCACACCCACACACACAG 60.823 63.158 0.00 0.00 0.00 3.66
683 779 2.273776 CCCACACCCACACACACA 59.726 61.111 0.00 0.00 0.00 3.72
685 781 3.814906 CCCCCACACCCACACACA 61.815 66.667 0.00 0.00 0.00 3.72
700 796 1.917336 TTATTGGGCCTCGACACCCC 61.917 60.000 14.14 9.01 46.43 4.95
702 798 1.594331 GATTATTGGGCCTCGACACC 58.406 55.000 4.53 0.00 0.00 4.16
704 800 1.507140 AGGATTATTGGGCCTCGACA 58.493 50.000 4.53 0.00 0.00 4.35
705 801 2.367567 TGTAGGATTATTGGGCCTCGAC 59.632 50.000 4.53 0.00 33.28 4.20
706 802 2.367567 GTGTAGGATTATTGGGCCTCGA 59.632 50.000 4.53 0.00 33.28 4.04
707 803 2.550208 GGTGTAGGATTATTGGGCCTCG 60.550 54.545 4.53 0.00 33.28 4.63
708 804 2.711547 AGGTGTAGGATTATTGGGCCTC 59.288 50.000 4.53 0.00 33.28 4.70
709 805 2.789219 AGGTGTAGGATTATTGGGCCT 58.211 47.619 4.53 0.00 35.82 5.19
710 806 3.393278 TGTAGGTGTAGGATTATTGGGCC 59.607 47.826 0.00 0.00 0.00 5.80
711 807 4.505039 CCTGTAGGTGTAGGATTATTGGGC 60.505 50.000 0.00 0.00 36.11 5.36
714 810 5.290493 TGCCTGTAGGTGTAGGATTATTG 57.710 43.478 0.00 0.00 36.11 1.90
716 812 5.606749 TGATTGCCTGTAGGTGTAGGATTAT 59.393 40.000 0.00 0.00 36.11 1.28
717 813 4.966168 TGATTGCCTGTAGGTGTAGGATTA 59.034 41.667 0.00 0.00 36.11 1.75
720 816 2.827755 TGATTGCCTGTAGGTGTAGGA 58.172 47.619 0.00 0.00 36.11 2.94
721 817 3.270877 GTTGATTGCCTGTAGGTGTAGG 58.729 50.000 0.00 0.00 37.57 3.18
722 818 3.935203 CTGTTGATTGCCTGTAGGTGTAG 59.065 47.826 0.00 0.00 37.57 2.74
723 819 3.307410 CCTGTTGATTGCCTGTAGGTGTA 60.307 47.826 0.00 0.00 37.57 2.90
725 821 2.086869 CCTGTTGATTGCCTGTAGGTG 58.913 52.381 0.00 0.00 37.57 4.00
727 823 2.787473 TCCTGTTGATTGCCTGTAGG 57.213 50.000 0.00 0.00 38.53 3.18
729 825 3.788227 ACTTCCTGTTGATTGCCTGTA 57.212 42.857 0.00 0.00 0.00 2.74
731 827 3.120199 CGTAACTTCCTGTTGATTGCCTG 60.120 47.826 0.00 0.00 39.55 4.85
733 829 2.161609 CCGTAACTTCCTGTTGATTGCC 59.838 50.000 0.00 0.00 39.55 4.52
734 830 3.071479 TCCGTAACTTCCTGTTGATTGC 58.929 45.455 0.00 0.00 39.55 3.56
735 831 3.435671 GGTCCGTAACTTCCTGTTGATTG 59.564 47.826 0.00 0.00 39.55 2.67
738 834 2.298163 GAGGTCCGTAACTTCCTGTTGA 59.702 50.000 0.00 0.00 39.55 3.18
739 835 2.685100 GAGGTCCGTAACTTCCTGTTG 58.315 52.381 0.00 0.00 39.55 3.33
747 843 1.358445 AGAGAAGGGAGGTCCGTAACT 59.642 52.381 0.00 0.00 41.52 2.24
748 844 1.849977 AGAGAAGGGAGGTCCGTAAC 58.150 55.000 0.00 0.00 41.52 2.50
750 846 1.639628 AGAAGAGAAGGGAGGTCCGTA 59.360 52.381 0.00 0.00 41.52 4.02
753 849 4.290942 TGATTAGAAGAGAAGGGAGGTCC 58.709 47.826 0.00 0.00 0.00 4.46
754 850 6.014925 GGTATGATTAGAAGAGAAGGGAGGTC 60.015 46.154 0.00 0.00 0.00 3.85
757 853 6.210584 GGAGGTATGATTAGAAGAGAAGGGAG 59.789 46.154 0.00 0.00 0.00 4.30
758 854 6.078664 GGAGGTATGATTAGAAGAGAAGGGA 58.921 44.000 0.00 0.00 0.00 4.20
760 856 5.565834 GCGGAGGTATGATTAGAAGAGAAGG 60.566 48.000 0.00 0.00 0.00 3.46
762 858 4.281182 GGCGGAGGTATGATTAGAAGAGAA 59.719 45.833 0.00 0.00 0.00 2.87
763 859 3.827302 GGCGGAGGTATGATTAGAAGAGA 59.173 47.826 0.00 0.00 0.00 3.10
764 860 3.056465 GGGCGGAGGTATGATTAGAAGAG 60.056 52.174 0.00 0.00 0.00 2.85
765 861 2.897969 GGGCGGAGGTATGATTAGAAGA 59.102 50.000 0.00 0.00 0.00 2.87
766 862 2.028020 GGGGCGGAGGTATGATTAGAAG 60.028 54.545 0.00 0.00 0.00 2.85
767 863 1.975680 GGGGCGGAGGTATGATTAGAA 59.024 52.381 0.00 0.00 0.00 2.10
768 864 1.640917 GGGGCGGAGGTATGATTAGA 58.359 55.000 0.00 0.00 0.00 2.10
769 865 0.613777 GGGGGCGGAGGTATGATTAG 59.386 60.000 0.00 0.00 0.00 1.73
770 866 0.192566 AGGGGGCGGAGGTATGATTA 59.807 55.000 0.00 0.00 0.00 1.75
771 867 1.073706 AGGGGGCGGAGGTATGATT 60.074 57.895 0.00 0.00 0.00 2.57
772 868 1.843376 CAGGGGGCGGAGGTATGAT 60.843 63.158 0.00 0.00 0.00 2.45
773 869 2.326529 ATCAGGGGGCGGAGGTATGA 62.327 60.000 0.00 0.00 0.00 2.15
774 870 1.418908 AATCAGGGGGCGGAGGTATG 61.419 60.000 0.00 0.00 0.00 2.39
775 871 0.697854 AAATCAGGGGGCGGAGGTAT 60.698 55.000 0.00 0.00 0.00 2.73
776 872 0.917333 AAAATCAGGGGGCGGAGGTA 60.917 55.000 0.00 0.00 0.00 3.08
777 873 2.211468 GAAAATCAGGGGGCGGAGGT 62.211 60.000 0.00 0.00 0.00 3.85
778 874 1.453928 GAAAATCAGGGGGCGGAGG 60.454 63.158 0.00 0.00 0.00 4.30
779 875 0.749454 CTGAAAATCAGGGGGCGGAG 60.749 60.000 0.00 0.00 40.71 4.63
780 876 1.302949 CTGAAAATCAGGGGGCGGA 59.697 57.895 0.00 0.00 40.71 5.54
781 877 3.924507 CTGAAAATCAGGGGGCGG 58.075 61.111 0.00 0.00 40.71 6.13
788 884 1.839424 GGTCCACCCCTGAAAATCAG 58.161 55.000 0.32 0.32 43.91 2.90
789 885 0.037590 CGGTCCACCCCTGAAAATCA 59.962 55.000 0.00 0.00 0.00 2.57
790 886 0.679960 CCGGTCCACCCCTGAAAATC 60.680 60.000 0.00 0.00 0.00 2.17
791 887 1.382629 CCGGTCCACCCCTGAAAAT 59.617 57.895 0.00 0.00 0.00 1.82
792 888 2.079911 ACCGGTCCACCCCTGAAAA 61.080 57.895 0.00 0.00 0.00 2.29
793 889 2.448931 ACCGGTCCACCCCTGAAA 60.449 61.111 0.00 0.00 0.00 2.69
794 890 3.246112 CACCGGTCCACCCCTGAA 61.246 66.667 2.59 0.00 0.00 3.02
803 899 2.781431 AATTTGGGAGGCACCGGTCC 62.781 60.000 2.59 9.79 40.11 4.46
804 900 1.304134 AATTTGGGAGGCACCGGTC 60.304 57.895 2.59 0.00 40.11 4.79
805 901 1.606313 CAATTTGGGAGGCACCGGT 60.606 57.895 0.00 0.00 40.11 5.28
806 902 1.304052 TCAATTTGGGAGGCACCGG 60.304 57.895 0.00 0.00 40.11 5.28
807 903 1.595093 GGTCAATTTGGGAGGCACCG 61.595 60.000 0.00 0.00 40.11 4.94
808 904 0.541764 TGGTCAATTTGGGAGGCACC 60.542 55.000 0.00 0.00 38.08 5.01
809 905 1.337118 TTGGTCAATTTGGGAGGCAC 58.663 50.000 0.00 0.00 0.00 5.01
810 906 1.901159 CATTGGTCAATTTGGGAGGCA 59.099 47.619 0.00 0.00 0.00 4.75
811 907 2.178580 TCATTGGTCAATTTGGGAGGC 58.821 47.619 0.00 0.00 0.00 4.70
812 908 4.527816 TCTTTCATTGGTCAATTTGGGAGG 59.472 41.667 0.00 0.00 0.00 4.30
813 909 5.726980 TCTTTCATTGGTCAATTTGGGAG 57.273 39.130 0.00 0.00 0.00 4.30
814 910 6.465948 CATTCTTTCATTGGTCAATTTGGGA 58.534 36.000 0.00 0.00 0.00 4.37
815 911 5.122711 GCATTCTTTCATTGGTCAATTTGGG 59.877 40.000 0.00 0.00 0.00 4.12
816 912 5.122711 GGCATTCTTTCATTGGTCAATTTGG 59.877 40.000 0.00 0.00 0.00 3.28
817 913 5.935789 AGGCATTCTTTCATTGGTCAATTTG 59.064 36.000 0.00 0.00 0.00 2.32
818 914 6.117975 AGGCATTCTTTCATTGGTCAATTT 57.882 33.333 0.00 0.00 0.00 1.82
819 915 5.622914 CGAGGCATTCTTTCATTGGTCAATT 60.623 40.000 0.00 0.00 0.00 2.32
820 916 4.142315 CGAGGCATTCTTTCATTGGTCAAT 60.142 41.667 0.00 0.00 0.00 2.57
821 917 3.191162 CGAGGCATTCTTTCATTGGTCAA 59.809 43.478 0.00 0.00 0.00 3.18
822 918 2.749076 CGAGGCATTCTTTCATTGGTCA 59.251 45.455 0.00 0.00 0.00 4.02
823 919 2.749621 ACGAGGCATTCTTTCATTGGTC 59.250 45.455 0.00 0.00 0.00 4.02
824 920 2.749621 GACGAGGCATTCTTTCATTGGT 59.250 45.455 0.00 0.00 0.00 3.67
825 921 2.749076 TGACGAGGCATTCTTTCATTGG 59.251 45.455 0.00 0.00 0.00 3.16
826 922 3.426695 GGTGACGAGGCATTCTTTCATTG 60.427 47.826 0.00 0.00 0.00 2.82
827 923 2.749621 GGTGACGAGGCATTCTTTCATT 59.250 45.455 0.00 0.00 0.00 2.57
828 924 2.359900 GGTGACGAGGCATTCTTTCAT 58.640 47.619 0.00 0.00 0.00 2.57
829 925 1.610624 GGGTGACGAGGCATTCTTTCA 60.611 52.381 0.00 0.00 0.00 2.69
830 926 1.087501 GGGTGACGAGGCATTCTTTC 58.912 55.000 0.00 0.00 0.00 2.62
831 927 0.693049 AGGGTGACGAGGCATTCTTT 59.307 50.000 0.00 0.00 0.00 2.52
832 928 0.036010 CAGGGTGACGAGGCATTCTT 60.036 55.000 0.00 0.00 0.00 2.52
833 929 1.194781 ACAGGGTGACGAGGCATTCT 61.195 55.000 0.00 0.00 0.00 2.40
834 930 0.535335 TACAGGGTGACGAGGCATTC 59.465 55.000 0.00 0.00 0.00 2.67
835 931 0.981183 TTACAGGGTGACGAGGCATT 59.019 50.000 0.00 0.00 0.00 3.56
836 932 0.981183 TTTACAGGGTGACGAGGCAT 59.019 50.000 0.00 0.00 0.00 4.40
837 933 0.034337 GTTTACAGGGTGACGAGGCA 59.966 55.000 0.00 0.00 0.00 4.75
838 934 0.672711 GGTTTACAGGGTGACGAGGC 60.673 60.000 0.00 0.00 0.00 4.70
839 935 0.682852 TGGTTTACAGGGTGACGAGG 59.317 55.000 0.00 0.00 0.00 4.63
840 936 1.343465 AGTGGTTTACAGGGTGACGAG 59.657 52.381 0.00 0.00 0.00 4.18
841 937 1.342174 GAGTGGTTTACAGGGTGACGA 59.658 52.381 0.00 0.00 0.00 4.20
842 938 1.343465 AGAGTGGTTTACAGGGTGACG 59.657 52.381 0.00 0.00 0.00 4.35
843 939 2.289506 GGAGAGTGGTTTACAGGGTGAC 60.290 54.545 0.00 0.00 0.00 3.67
844 940 1.975680 GGAGAGTGGTTTACAGGGTGA 59.024 52.381 0.00 0.00 0.00 4.02
845 941 1.003233 GGGAGAGTGGTTTACAGGGTG 59.997 57.143 0.00 0.00 0.00 4.61
846 942 1.359168 GGGAGAGTGGTTTACAGGGT 58.641 55.000 0.00 0.00 0.00 4.34
847 943 0.618981 GGGGAGAGTGGTTTACAGGG 59.381 60.000 0.00 0.00 0.00 4.45
848 944 0.618981 GGGGGAGAGTGGTTTACAGG 59.381 60.000 0.00 0.00 0.00 4.00
849 945 0.249398 CGGGGGAGAGTGGTTTACAG 59.751 60.000 0.00 0.00 0.00 2.74
850 946 0.472352 ACGGGGGAGAGTGGTTTACA 60.472 55.000 0.00 0.00 0.00 2.41
851 947 1.560505 TACGGGGGAGAGTGGTTTAC 58.439 55.000 0.00 0.00 0.00 2.01
852 948 2.323999 TTACGGGGGAGAGTGGTTTA 57.676 50.000 0.00 0.00 0.00 2.01
853 949 1.665137 ATTACGGGGGAGAGTGGTTT 58.335 50.000 0.00 0.00 0.00 3.27
854 950 1.665137 AATTACGGGGGAGAGTGGTT 58.335 50.000 0.00 0.00 0.00 3.67
855 951 1.558294 GAAATTACGGGGGAGAGTGGT 59.442 52.381 0.00 0.00 0.00 4.16
856 952 1.134189 GGAAATTACGGGGGAGAGTGG 60.134 57.143 0.00 0.00 0.00 4.00
857 953 1.838077 AGGAAATTACGGGGGAGAGTG 59.162 52.381 0.00 0.00 0.00 3.51
858 954 1.838077 CAGGAAATTACGGGGGAGAGT 59.162 52.381 0.00 0.00 0.00 3.24
859 955 1.838077 ACAGGAAATTACGGGGGAGAG 59.162 52.381 0.00 0.00 0.00 3.20
860 956 1.961133 ACAGGAAATTACGGGGGAGA 58.039 50.000 0.00 0.00 0.00 3.71
861 957 3.036091 TCTACAGGAAATTACGGGGGAG 58.964 50.000 0.00 0.00 0.00 4.30
862 958 3.119009 TCTACAGGAAATTACGGGGGA 57.881 47.619 0.00 0.00 0.00 4.81
863 959 3.135895 ACATCTACAGGAAATTACGGGGG 59.864 47.826 0.00 0.00 0.00 5.40
864 960 4.417426 ACATCTACAGGAAATTACGGGG 57.583 45.455 0.00 0.00 0.00 5.73
865 961 4.989168 GCTACATCTACAGGAAATTACGGG 59.011 45.833 0.00 0.00 0.00 5.28
866 962 5.597806 TGCTACATCTACAGGAAATTACGG 58.402 41.667 0.00 0.00 0.00 4.02
867 963 7.715265 AATGCTACATCTACAGGAAATTACG 57.285 36.000 0.00 0.00 0.00 3.18
868 964 9.765795 AGTAATGCTACATCTACAGGAAATTAC 57.234 33.333 0.00 0.00 0.00 1.89
869 965 9.764363 CAGTAATGCTACATCTACAGGAAATTA 57.236 33.333 0.00 0.00 0.00 1.40
870 966 7.716998 CCAGTAATGCTACATCTACAGGAAATT 59.283 37.037 0.00 0.00 0.00 1.82
871 967 7.147479 ACCAGTAATGCTACATCTACAGGAAAT 60.147 37.037 13.17 0.00 0.00 2.17
872 968 6.156256 ACCAGTAATGCTACATCTACAGGAAA 59.844 38.462 13.17 0.00 0.00 3.13
873 969 5.661312 ACCAGTAATGCTACATCTACAGGAA 59.339 40.000 13.17 0.00 0.00 3.36
874 970 5.208890 ACCAGTAATGCTACATCTACAGGA 58.791 41.667 13.17 0.00 0.00 3.86
875 971 5.533482 GACCAGTAATGCTACATCTACAGG 58.467 45.833 0.00 0.00 0.00 4.00
876 972 5.008712 TCGACCAGTAATGCTACATCTACAG 59.991 44.000 0.00 0.00 0.00 2.74
877 973 4.885325 TCGACCAGTAATGCTACATCTACA 59.115 41.667 0.00 0.00 0.00 2.74
878 974 5.434352 TCGACCAGTAATGCTACATCTAC 57.566 43.478 0.00 0.00 0.00 2.59
879 975 4.519350 CCTCGACCAGTAATGCTACATCTA 59.481 45.833 0.00 0.00 0.00 1.98
880 976 3.319405 CCTCGACCAGTAATGCTACATCT 59.681 47.826 0.00 0.00 0.00 2.90
881 977 3.643763 CCTCGACCAGTAATGCTACATC 58.356 50.000 0.00 0.00 0.00 3.06
882 978 2.224066 GCCTCGACCAGTAATGCTACAT 60.224 50.000 0.00 0.00 0.00 2.29
883 979 1.136305 GCCTCGACCAGTAATGCTACA 59.864 52.381 0.00 0.00 0.00 2.74
884 980 1.538419 GGCCTCGACCAGTAATGCTAC 60.538 57.143 0.00 0.00 0.00 3.58
885 981 0.750850 GGCCTCGACCAGTAATGCTA 59.249 55.000 0.00 0.00 0.00 3.49
886 982 1.522569 GGCCTCGACCAGTAATGCT 59.477 57.895 0.00 0.00 0.00 3.79
887 983 1.523938 GGGCCTCGACCAGTAATGC 60.524 63.158 0.84 0.00 0.00 3.56
888 984 1.146263 GGGGCCTCGACCAGTAATG 59.854 63.158 0.84 0.00 27.52 1.90
889 985 2.432300 CGGGGCCTCGACCAGTAAT 61.432 63.158 24.25 0.00 27.52 1.89
890 986 3.072468 CGGGGCCTCGACCAGTAA 61.072 66.667 24.25 0.00 27.52 2.24
891 987 4.051167 TCGGGGCCTCGACCAGTA 62.051 66.667 27.50 0.00 33.92 2.74
896 992 3.358076 CTTGTCTCGGGGCCTCGAC 62.358 68.421 27.50 17.69 35.18 4.20
897 993 3.068691 CTTGTCTCGGGGCCTCGA 61.069 66.667 29.25 29.25 37.60 4.04
919 1015 0.514691 CTTTGAGAAGTGGCGACTGC 59.485 55.000 0.71 0.00 41.71 4.40
955 1051 3.422862 CGCTTCTCTCGCTTTCTTTTCTG 60.423 47.826 0.00 0.00 0.00 3.02
985 1082 2.509336 CATGGCCGACGAGTCACC 60.509 66.667 0.00 4.90 0.00 4.02
1059 1156 3.706373 GCGAGGGCCAGGACAAGA 61.706 66.667 6.18 0.00 0.00 3.02
1110 1207 2.582436 GATGGCGACGAAGGGGAA 59.418 61.111 0.00 0.00 0.00 3.97
1329 1426 2.015736 TGTACTCGTCCTCGTAGTCC 57.984 55.000 0.00 0.00 38.33 3.85
1603 1700 1.991264 CGCCATGAGCTCGAATCATAG 59.009 52.381 9.64 6.85 40.39 2.23
1610 1707 3.838271 GGGACGCCATGAGCTCGA 61.838 66.667 9.64 0.00 40.39 4.04
1621 1718 0.740737 CAGATCCAAAATGGGGACGC 59.259 55.000 0.00 0.00 38.32 5.19
1669 1767 9.413734 CTCCCAATAGATAAACTTTTTCCTGAT 57.586 33.333 0.00 0.00 0.00 2.90
1721 1819 4.326826 CACCAAAATCCAGAGCTTACTCA 58.673 43.478 0.00 0.00 46.09 3.41
1750 1848 6.144402 TGAACTAAAACCACGACGAGTAAATC 59.856 38.462 0.00 0.00 0.00 2.17
1751 1849 5.984926 TGAACTAAAACCACGACGAGTAAAT 59.015 36.000 0.00 0.00 0.00 1.40
1753 1851 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
1754 1852 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
1755 1853 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
1757 1855 5.738118 AATTTGAACTAAAACCACGACGA 57.262 34.783 0.00 0.00 0.00 4.20
1759 1857 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
1772 1870 6.469595 CGTCGTGGTTTTAGTTCAAATTTGAA 59.530 34.615 26.01 26.01 44.31 2.69
1773 1871 5.966503 CGTCGTGGTTTTAGTTCAAATTTGA 59.033 36.000 16.91 16.91 34.92 2.69
1774 1872 5.966503 TCGTCGTGGTTTTAGTTCAAATTTG 59.033 36.000 12.15 12.15 0.00 2.32
1776 1874 5.295045 ACTCGTCGTGGTTTTAGTTCAAATT 59.705 36.000 0.00 0.00 0.00 1.82
1779 1877 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
1780 1878 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
1781 1879 5.888412 TTTACTCGTCGTGGTTTTAGTTC 57.112 39.130 0.00 0.00 0.00 3.01
1782 1880 5.117592 CGATTTACTCGTCGTGGTTTTAGTT 59.882 40.000 0.00 0.00 42.56 2.24
1783 1881 4.618489 CGATTTACTCGTCGTGGTTTTAGT 59.382 41.667 0.00 0.00 42.56 2.24
1784 1882 5.109815 CGATTTACTCGTCGTGGTTTTAG 57.890 43.478 0.00 0.00 42.56 1.85
1797 1895 3.119209 ACTCCCTCCGTTTCGATTTACTC 60.119 47.826 0.00 0.00 0.00 2.59
1801 1899 4.482952 AATACTCCCTCCGTTTCGATTT 57.517 40.909 0.00 0.00 0.00 2.17
1804 1902 2.827322 TCAAATACTCCCTCCGTTTCGA 59.173 45.455 0.00 0.00 0.00 3.71
1805 1903 3.241067 TCAAATACTCCCTCCGTTTCG 57.759 47.619 0.00 0.00 0.00 3.46
1806 1904 5.183228 TGAATCAAATACTCCCTCCGTTTC 58.817 41.667 0.00 0.00 0.00 2.78
1808 1906 4.469945 TCTGAATCAAATACTCCCTCCGTT 59.530 41.667 0.00 0.00 0.00 4.44
1809 1907 4.030913 TCTGAATCAAATACTCCCTCCGT 58.969 43.478 0.00 0.00 0.00 4.69
1810 1908 4.372656 GTCTGAATCAAATACTCCCTCCG 58.627 47.826 0.00 0.00 0.00 4.63
1811 1909 4.410555 AGGTCTGAATCAAATACTCCCTCC 59.589 45.833 0.00 0.00 0.00 4.30
1812 1910 5.104735 ACAGGTCTGAATCAAATACTCCCTC 60.105 44.000 4.84 0.00 0.00 4.30
1813 1911 4.785376 ACAGGTCTGAATCAAATACTCCCT 59.215 41.667 4.84 0.00 0.00 4.20
1814 1912 5.104259 ACAGGTCTGAATCAAATACTCCC 57.896 43.478 4.84 0.00 0.00 4.30
1815 1913 6.879400 ACTACAGGTCTGAATCAAATACTCC 58.121 40.000 4.84 0.00 0.00 3.85
1816 1914 6.981559 GGACTACAGGTCTGAATCAAATACTC 59.018 42.308 4.84 0.00 43.97 2.59
1832 1946 6.732896 ATACTAAGTGGATTGGACTACAGG 57.267 41.667 0.00 0.00 0.00 4.00
1878 2001 3.533606 GAGCTGCACTCATTCCTCTTA 57.466 47.619 1.02 0.00 45.49 2.10
2018 2165 3.130340 CCCCAAATACGGTCAATTTGAGG 59.870 47.826 14.84 9.31 43.79 3.86
2057 2204 4.768448 TCAGAACACGAACTTAGGATGGTA 59.232 41.667 0.00 0.00 0.00 3.25
2058 2205 3.576982 TCAGAACACGAACTTAGGATGGT 59.423 43.478 0.00 0.00 0.00 3.55
2059 2206 4.188247 TCAGAACACGAACTTAGGATGG 57.812 45.455 0.00 0.00 0.00 3.51
2063 2210 5.924475 ATTGTTCAGAACACGAACTTAGG 57.076 39.130 15.93 0.00 42.63 2.69
2109 2256 3.919216 AGATGCATACGAATAGGTGCTC 58.081 45.455 0.00 0.00 36.80 4.26
2174 2321 8.758633 TGTGAATGCTCTAAGTTTACTAGTTC 57.241 34.615 0.00 0.00 0.00 3.01
2188 2335 8.868103 TCAATAGATCTAGAATGTGAATGCTCT 58.132 33.333 8.70 0.00 0.00 4.09
2250 2397 5.765576 TTGCTAACCTACATGGGAACTAA 57.234 39.130 0.00 0.00 41.11 2.24
2251 2398 5.249852 ACTTTGCTAACCTACATGGGAACTA 59.750 40.000 0.00 0.00 41.11 2.24
2252 2399 4.042934 ACTTTGCTAACCTACATGGGAACT 59.957 41.667 0.00 0.00 41.11 3.01
2253 2400 4.332828 ACTTTGCTAACCTACATGGGAAC 58.667 43.478 0.00 0.00 41.11 3.62
2255 2402 4.202524 ACAACTTTGCTAACCTACATGGGA 60.203 41.667 0.00 0.00 41.11 4.37
2256 2403 4.079253 ACAACTTTGCTAACCTACATGGG 58.921 43.478 0.00 0.00 41.11 4.00
2257 2404 6.038271 GGATACAACTTTGCTAACCTACATGG 59.962 42.308 0.00 0.00 42.93 3.66
2258 2405 6.038271 GGGATACAACTTTGCTAACCTACATG 59.962 42.308 0.00 0.00 39.74 3.21
2260 2407 5.013287 TGGGATACAACTTTGCTAACCTACA 59.987 40.000 0.00 0.00 39.74 2.74
2261 2408 5.353400 GTGGGATACAACTTTGCTAACCTAC 59.647 44.000 0.00 0.00 39.74 3.18
2262 2409 5.493809 GTGGGATACAACTTTGCTAACCTA 58.506 41.667 0.00 0.00 39.74 3.08
2263 2410 4.332828 GTGGGATACAACTTTGCTAACCT 58.667 43.478 0.00 0.00 39.74 3.50
2264 2411 3.126343 CGTGGGATACAACTTTGCTAACC 59.874 47.826 0.00 0.00 39.74 2.85
2265 2412 3.425758 GCGTGGGATACAACTTTGCTAAC 60.426 47.826 0.00 0.00 39.74 2.34
2269 2416 1.135689 CAGCGTGGGATACAACTTTGC 60.136 52.381 0.00 0.00 39.74 3.68
2315 2464 6.209589 CCTACTTACTATGAGCTTGATAGGCA 59.790 42.308 14.85 0.00 0.00 4.75
2329 2478 5.081315 AGGATGCTGGACCTACTTACTAT 57.919 43.478 0.00 0.00 34.47 2.12
2332 2481 4.081087 TCAAAGGATGCTGGACCTACTTAC 60.081 45.833 0.00 0.00 35.25 2.34
2343 2492 3.689161 TCACGGTTTATCAAAGGATGCTG 59.311 43.478 0.00 0.00 34.89 4.41
2365 2514 6.065976 TGTGATCATTTGGTAGTGGAAGAT 57.934 37.500 0.00 0.00 0.00 2.40
2371 2520 4.665212 GCACATGTGATCATTTGGTAGTG 58.335 43.478 29.80 3.18 33.75 2.74
2400 2549 1.645034 TAGTGCTCAGCTCAAATCGC 58.355 50.000 0.00 0.00 0.00 4.58
2405 2554 4.541973 TGAGATTTAGTGCTCAGCTCAA 57.458 40.909 0.00 0.00 36.31 3.02
2410 2559 8.309656 TGGACATATATGAGATTTAGTGCTCAG 58.690 37.037 19.63 0.00 43.65 3.35
2484 2633 4.279922 CCATCCATATCAGCAGCATTGAAA 59.720 41.667 0.00 0.00 0.00 2.69
2496 2645 1.423584 AGCCGTCACCATCCATATCA 58.576 50.000 0.00 0.00 0.00 2.15
2505 2654 3.007506 TCAGATTTAGAAAGCCGTCACCA 59.992 43.478 0.00 0.00 0.00 4.17
2544 2693 6.536941 GCTAAAGGAGGTCAGATAGAAAGTTG 59.463 42.308 0.00 0.00 0.00 3.16
2617 2766 4.877823 CAGCTGGATGTAAGAAACTGCATA 59.122 41.667 5.57 0.00 0.00 3.14
2624 2773 6.382859 TGGTAGTATCAGCTGGATGTAAGAAA 59.617 38.462 15.13 0.00 36.72 2.52
2653 2802 6.825944 TGCACAACCAATGTATTAGCTTTA 57.174 33.333 0.00 0.00 41.46 1.85
4202 4897 3.562182 AGTCGAAACATCAACCCCTTTT 58.438 40.909 0.00 0.00 0.00 2.27
4211 4906 7.824289 AGGAATTAATGAGAAGTCGAAACATCA 59.176 33.333 0.00 0.00 0.00 3.07
4214 4909 6.934645 ACAGGAATTAATGAGAAGTCGAAACA 59.065 34.615 0.00 0.00 0.00 2.83
4215 4910 7.365840 ACAGGAATTAATGAGAAGTCGAAAC 57.634 36.000 0.00 0.00 0.00 2.78
4219 4914 9.098355 TCAATTACAGGAATTAATGAGAAGTCG 57.902 33.333 0.00 0.00 35.45 4.18
4258 4953 4.287845 AGGGAGTATCATGCAGCATCATAA 59.712 41.667 4.38 0.00 36.25 1.90
4286 4988 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
4292 4994 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
4301 5003 9.664332 AATATGTCTAGATACATCCATTTCTGC 57.336 33.333 0.00 0.00 40.52 4.26
4334 5036 7.492669 ACTTGTCTCGGAAATGAATGTATGTAG 59.507 37.037 0.00 0.00 0.00 2.74
4337 5039 6.668541 ACTTGTCTCGGAAATGAATGTATG 57.331 37.500 0.00 0.00 0.00 2.39
4346 5048 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
4347 5049 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
4348 5050 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
4349 5051 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
4351 5053 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
4352 5054 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
4354 5056 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
4355 5057 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
4357 5059 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
4360 5062 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4361 5063 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
4362 5064 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
4363 5065 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
4364 5066 0.911769 TAGTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
4365 5067 1.020437 GTAGTACTCCCTCCGTTCGG 58.980 60.000 0.00 4.74 0.00 4.30
4366 5068 1.742761 TGTAGTACTCCCTCCGTTCG 58.257 55.000 0.00 0.00 0.00 3.95
4367 5069 5.068636 TCATATGTAGTACTCCCTCCGTTC 58.931 45.833 0.00 0.00 0.00 3.95
4368 5070 5.057843 TCATATGTAGTACTCCCTCCGTT 57.942 43.478 0.00 0.00 0.00 4.44
4369 5071 4.104420 ACTCATATGTAGTACTCCCTCCGT 59.896 45.833 0.00 0.00 0.00 4.69
4370 5072 4.653868 ACTCATATGTAGTACTCCCTCCG 58.346 47.826 0.00 0.00 0.00 4.63
4371 5073 6.980416 AAACTCATATGTAGTACTCCCTCC 57.020 41.667 0.00 0.00 0.00 4.30
4372 5074 9.134055 ACTAAAACTCATATGTAGTACTCCCTC 57.866 37.037 0.00 0.00 0.00 4.30
4373 5075 8.915036 CACTAAAACTCATATGTAGTACTCCCT 58.085 37.037 0.00 0.00 0.00 4.20
4374 5076 7.652507 GCACTAAAACTCATATGTAGTACTCCC 59.347 40.741 0.00 0.00 0.00 4.30
4375 5077 8.414778 AGCACTAAAACTCATATGTAGTACTCC 58.585 37.037 0.00 0.00 0.00 3.85
4376 5078 9.239002 CAGCACTAAAACTCATATGTAGTACTC 57.761 37.037 0.00 0.00 0.00 2.59
4377 5079 8.750298 ACAGCACTAAAACTCATATGTAGTACT 58.250 33.333 0.00 0.00 0.00 2.73
4378 5080 8.928270 ACAGCACTAAAACTCATATGTAGTAC 57.072 34.615 1.90 0.00 0.00 2.73
4379 5081 9.938280 AAACAGCACTAAAACTCATATGTAGTA 57.062 29.630 1.90 0.00 0.00 1.82
4380 5082 8.848474 AAACAGCACTAAAACTCATATGTAGT 57.152 30.769 1.90 2.54 0.00 2.73
4382 5084 9.938280 ACTAAACAGCACTAAAACTCATATGTA 57.062 29.630 1.90 0.00 0.00 2.29
4383 5085 8.848474 ACTAAACAGCACTAAAACTCATATGT 57.152 30.769 1.90 0.00 0.00 2.29
4396 5098 6.864342 AGATACGTCATAACTAAACAGCACT 58.136 36.000 0.00 0.00 0.00 4.40
4401 5103 8.742777 AGTACCAAGATACGTCATAACTAAACA 58.257 33.333 0.00 0.00 0.00 2.83
4412 5114 7.478322 TGACTAATCAAGTACCAAGATACGTC 58.522 38.462 0.00 2.75 39.07 4.34
4465 5273 2.026262 ACGGCTGGATTCAAGTACCAAT 60.026 45.455 0.00 0.00 33.14 3.16
4515 5323 6.335777 GCACAAATCAGGCATTAAATCTTCT 58.664 36.000 0.00 0.00 0.00 2.85
4521 5329 2.902486 TGGGCACAAATCAGGCATTAAA 59.098 40.909 0.00 0.00 0.00 1.52
4525 5333 1.276989 CTTTGGGCACAAATCAGGCAT 59.723 47.619 15.86 0.00 44.91 4.40
4528 5336 2.094545 GCTACTTTGGGCACAAATCAGG 60.095 50.000 15.86 5.68 44.91 3.86
4529 5337 2.821969 AGCTACTTTGGGCACAAATCAG 59.178 45.455 15.86 15.28 44.91 2.90
4575 5387 3.583806 CCAACGTATTACGGTAACACCA 58.416 45.455 19.51 0.00 41.04 4.17
4588 5400 2.297701 CCAGCCAATTAGCCAACGTAT 58.702 47.619 0.00 0.00 0.00 3.06
4643 5455 3.740115 TGTTTTTGGTGGCTCTCTAGTC 58.260 45.455 0.00 0.00 0.00 2.59
4736 5548 4.265073 GACTCATTGATACCCAAAGTGCT 58.735 43.478 0.00 0.00 38.43 4.40
4753 5565 4.613944 ACTCGTTGTTTTCATACGACTCA 58.386 39.130 0.00 0.00 37.89 3.41
4806 5618 5.755861 GGGACTCAGCAAGAATCAGTATAAC 59.244 44.000 0.00 0.00 0.00 1.89
4976 5788 3.869065 TGGTACTGGCTAACACAATAGC 58.131 45.455 0.00 0.00 46.06 2.97
5026 5838 8.593679 AGGGTTCCTAAAATAAATTCAGTTTGG 58.406 33.333 0.00 0.00 28.47 3.28
5142 5955 7.106239 GTCATTATCTTTGTCTCTTTCCCTGA 58.894 38.462 0.00 0.00 0.00 3.86
5278 6091 3.364366 CCAGATCAAGCTGTGAAAACGAC 60.364 47.826 0.00 0.00 40.50 4.34
5388 6201 3.990959 AAAGCCTACAGAAAGGAGGAG 57.009 47.619 0.00 0.00 39.15 3.69
5392 6205 4.389374 CTCACAAAAGCCTACAGAAAGGA 58.611 43.478 0.00 0.00 39.15 3.36
5412 6225 2.371910 AGGTTTTAGCTCGTCTGCTC 57.628 50.000 0.00 0.00 42.97 4.26
5649 6462 6.712095 ACTGCAGAATTACTCATTCAACTTGA 59.288 34.615 23.35 0.00 43.63 3.02
5686 6499 9.023962 TCAGATAACAAATCAGCAGGTAATTTT 57.976 29.630 0.00 0.00 0.00 1.82
5748 6562 4.058124 TCTCATTCAAACTCAGTTGTCCG 58.942 43.478 0.00 0.00 0.00 4.79
5754 6568 7.392418 TCTCAATCATCTCATTCAAACTCAGT 58.608 34.615 0.00 0.00 0.00 3.41
5854 6668 0.249398 ACCGAGCACCATGTACCTTC 59.751 55.000 0.00 0.00 0.00 3.46
5862 6676 0.755698 AGACCGATACCGAGCACCAT 60.756 55.000 0.00 0.00 38.22 3.55
5942 6756 4.261801 CGTTCAAAGGTCCTGAATACCAT 58.738 43.478 0.00 0.00 39.64 3.55
6082 6897 1.810151 GAATACCTCGGTGCAAAAGCA 59.190 47.619 0.00 0.00 0.00 3.91
6096 6911 5.294552 AGAAAATAGCAAGCACTCGAATACC 59.705 40.000 0.00 0.00 0.00 2.73
6350 7181 7.659799 GGAATGCCAGTTACATACATACATACA 59.340 37.037 0.00 0.00 0.00 2.29
6351 7182 7.878127 AGGAATGCCAGTTACATACATACATAC 59.122 37.037 0.00 0.00 36.29 2.39
6352 7183 7.877612 CAGGAATGCCAGTTACATACATACATA 59.122 37.037 0.00 0.00 36.29 2.29
6353 7184 6.712095 CAGGAATGCCAGTTACATACATACAT 59.288 38.462 0.00 0.00 36.29 2.29
6438 7273 2.092291 GCCGAAATGTCGCACGAGA 61.092 57.895 0.00 0.00 46.28 4.04
6453 7288 2.073307 CAGCGGATTATCGATGCCG 58.927 57.895 23.42 23.42 46.14 5.69
6499 7335 2.128853 CTGCGCCTGCCGAAAGAAAA 62.129 55.000 4.18 0.00 41.78 2.29
6507 7343 2.981560 ATTTTGACTGCGCCTGCCG 61.982 57.895 4.18 0.00 41.78 5.69
6736 7585 2.293677 TCTCAGTTTGACCGAGTCTGTC 59.706 50.000 7.69 7.69 33.15 3.51
6738 7587 3.004839 TCTTCTCAGTTTGACCGAGTCTG 59.995 47.826 5.77 0.00 33.15 3.51
6800 7657 6.075984 TCACTTAACAGTTACTCCTCCTTCT 58.924 40.000 0.00 0.00 0.00 2.85
6801 7658 6.342338 TCACTTAACAGTTACTCCTCCTTC 57.658 41.667 0.00 0.00 0.00 3.46
6802 7659 6.741801 GCTTCACTTAACAGTTACTCCTCCTT 60.742 42.308 0.00 0.00 0.00 3.36



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.