Multiple sequence alignment - TraesCS6B01G213200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G213200 chr6B 100.000 5556 0 0 1 5556 287152725 287147170 0.000000e+00 10261.0
1 TraesCS6B01G213200 chr6B 89.831 118 9 2 3579 3693 333821964 333822081 1.250000e-31 148.0
2 TraesCS6B01G213200 chr6D 92.948 2269 118 27 2821 5071 157816972 157814728 0.000000e+00 3265.0
3 TraesCS6B01G213200 chr6D 92.934 1486 58 29 730 2177 157819430 157817954 0.000000e+00 2119.0
4 TraesCS6B01G213200 chr6D 94.714 681 35 1 47 727 451060934 451060255 0.000000e+00 1057.0
5 TraesCS6B01G213200 chr6D 95.448 659 28 2 2181 2838 157817729 157817072 0.000000e+00 1050.0
6 TraesCS6B01G213200 chr6D 85.529 463 65 2 139 601 461999572 461999112 3.010000e-132 483.0
7 TraesCS6B01G213200 chr6A 92.967 1493 76 14 3682 5160 214179663 214181140 0.000000e+00 2148.0
8 TraesCS6B01G213200 chr6A 92.613 1462 55 18 739 2174 214176278 214177712 0.000000e+00 2052.0
9 TraesCS6B01G213200 chr6A 94.606 686 31 4 2918 3600 214178838 214179520 0.000000e+00 1057.0
10 TraesCS6B01G213200 chr6A 96.524 489 17 0 2181 2669 214177968 214178456 0.000000e+00 809.0
11 TraesCS6B01G213200 chr6A 96.476 227 8 0 2664 2890 214178614 214178840 5.250000e-100 375.0
12 TraesCS6B01G213200 chr1B 95.455 682 30 1 47 727 600592153 600592834 0.000000e+00 1086.0
13 TraesCS6B01G213200 chr1B 92.661 109 5 2 3587 3692 492303981 492303873 2.680000e-33 154.0
14 TraesCS6B01G213200 chr1B 88.095 126 9 5 3580 3700 296486819 296486943 1.610000e-30 145.0
15 TraesCS6B01G213200 chr7B 93.078 679 47 0 48 726 516311783 516312461 0.000000e+00 994.0
16 TraesCS6B01G213200 chr7B 89.781 274 26 2 997 1268 483921304 483921031 3.190000e-92 350.0
17 TraesCS6B01G213200 chr7B 89.604 202 20 1 4379 4579 483914992 483914791 7.140000e-64 255.0
18 TraesCS6B01G213200 chr7D 92.890 647 45 1 48 694 31064632 31063987 0.000000e+00 939.0
19 TraesCS6B01G213200 chr7D 89.781 274 26 2 997 1268 461546952 461546679 3.190000e-92 350.0
20 TraesCS6B01G213200 chr7D 81.322 348 46 13 4379 4711 461541598 461541255 1.190000e-66 265.0
21 TraesCS6B01G213200 chr2D 79.798 693 124 13 48 728 51416066 51416754 1.800000e-134 490.0
22 TraesCS6B01G213200 chr3A 86.318 402 45 9 5162 5556 106736719 106736321 3.980000e-116 429.0
23 TraesCS6B01G213200 chr3A 85.994 357 41 8 5206 5556 107118115 107118468 1.890000e-99 374.0
24 TraesCS6B01G213200 chr3A 85.994 357 40 9 5206 5556 116441687 116441335 1.890000e-99 374.0
25 TraesCS6B01G213200 chr3A 89.831 118 9 2 3586 3700 707385858 707385975 1.250000e-31 148.0
26 TraesCS6B01G213200 chr4D 84.733 393 49 8 5168 5556 294287441 294287056 3.140000e-102 383.0
27 TraesCS6B01G213200 chr4D 89.344 122 6 4 3588 3702 160742368 160742247 4.490000e-31 147.0
28 TraesCS6B01G213200 chr7A 85.185 378 44 11 5184 5556 448650976 448650606 1.460000e-100 377.0
29 TraesCS6B01G213200 chr7A 90.775 271 23 2 997 1265 538689365 538689635 1.470000e-95 361.0
30 TraesCS6B01G213200 chr7A 81.897 348 44 14 4379 4711 538694719 538695062 5.480000e-70 276.0
31 TraesCS6B01G213200 chr7A 100.000 31 0 0 656 686 736065961 736065931 2.160000e-04 58.4
32 TraesCS6B01G213200 chr5A 85.714 357 41 9 5206 5556 413582531 413582883 8.790000e-98 368.0
33 TraesCS6B01G213200 chr5A 84.127 378 52 6 5184 5556 134029856 134030230 5.290000e-95 359.0
34 TraesCS6B01G213200 chr5A 87.597 129 10 5 3580 3704 382564722 382564848 1.610000e-30 145.0
35 TraesCS6B01G213200 chr5A 84.112 107 16 1 3223 3329 635774493 635774598 9.850000e-18 102.0
36 TraesCS6B01G213200 chr4A 83.586 396 51 11 5168 5556 4227179 4226791 5.290000e-95 359.0
37 TraesCS6B01G213200 chr1A 84.127 378 50 10 5184 5556 390630130 390629758 1.900000e-94 357.0
38 TraesCS6B01G213200 chr5D 89.916 119 8 3 3581 3695 193234619 193234737 3.470000e-32 150.0
39 TraesCS6B01G213200 chr5B 90.517 116 7 3 3588 3699 374429308 374429423 3.470000e-32 150.0
40 TraesCS6B01G213200 chr5B 83.178 107 17 1 3223 3329 638839042 638838937 4.580000e-16 97.1
41 TraesCS6B01G213200 chr2B 85.915 142 11 7 3559 3697 494265393 494265528 5.800000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G213200 chr6B 287147170 287152725 5555 True 10261.000000 10261 100.000000 1 5556 1 chr6B.!!$R1 5555
1 TraesCS6B01G213200 chr6D 157814728 157819430 4702 True 2144.666667 3265 93.776667 730 5071 3 chr6D.!!$R3 4341
2 TraesCS6B01G213200 chr6D 451060255 451060934 679 True 1057.000000 1057 94.714000 47 727 1 chr6D.!!$R1 680
3 TraesCS6B01G213200 chr6A 214176278 214181140 4862 False 1288.200000 2148 94.637200 739 5160 5 chr6A.!!$F1 4421
4 TraesCS6B01G213200 chr1B 600592153 600592834 681 False 1086.000000 1086 95.455000 47 727 1 chr1B.!!$F2 680
5 TraesCS6B01G213200 chr7B 516311783 516312461 678 False 994.000000 994 93.078000 48 726 1 chr7B.!!$F1 678
6 TraesCS6B01G213200 chr7D 31063987 31064632 645 True 939.000000 939 92.890000 48 694 1 chr7D.!!$R1 646
7 TraesCS6B01G213200 chr2D 51416066 51416754 688 False 490.000000 490 79.798000 48 728 1 chr2D.!!$F1 680

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
38 39 0.035630 AGCCATTCTGACCAGCTCAC 60.036 55.0 0.00 0.00 0.0 3.51 F
442 451 0.108472 CTGATTCCACGCAGCTGAGA 60.108 55.0 25.03 8.23 0.0 3.27 F
1499 1522 0.681733 CGGTATCCTGTGCTGGCTAT 59.318 55.0 0.00 0.00 0.0 2.97 F
1683 1741 1.134530 CACGCCGTCTCTGTTCGATC 61.135 60.0 0.00 0.00 0.0 3.69 F
3287 3889 0.759060 ACGATCGATGTGGATGGGGA 60.759 55.0 24.34 0.00 0.0 4.81 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1667 1725 0.452184 TGAGATCGAACAGAGACGGC 59.548 55.000 0.00 0.0 0.00 5.68 R
2150 2212 1.068281 AGCCATAGTGCATCAGACGAG 59.932 52.381 0.00 0.0 0.00 4.18 R
2495 2813 0.391661 ATAAGCCTGCACTGGTCGTG 60.392 55.000 0.00 0.0 46.58 4.35 R
3314 3916 0.663153 GTGCGATATCCTGCCCAAAC 59.337 55.000 0.00 0.0 0.00 2.93 R
5210 5897 0.179062 CTAGCGGCAGAGGAGCAAAT 60.179 55.000 1.45 0.0 35.83 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.120331 GGCAACGCATGTCCAGCC 62.120 66.667 5.80 5.80 34.64 4.85
23 24 3.364441 GCAACGCATGTCCAGCCA 61.364 61.111 0.00 0.00 0.00 4.75
24 25 2.703798 GCAACGCATGTCCAGCCAT 61.704 57.895 0.00 0.00 0.00 4.40
25 26 1.885157 CAACGCATGTCCAGCCATT 59.115 52.632 0.00 0.00 0.00 3.16
26 27 0.179156 CAACGCATGTCCAGCCATTC 60.179 55.000 0.00 0.00 0.00 2.67
27 28 0.322816 AACGCATGTCCAGCCATTCT 60.323 50.000 0.00 0.00 0.00 2.40
28 29 1.028330 ACGCATGTCCAGCCATTCTG 61.028 55.000 0.00 0.00 42.49 3.02
29 30 0.745486 CGCATGTCCAGCCATTCTGA 60.745 55.000 0.00 0.00 45.72 3.27
30 31 0.737219 GCATGTCCAGCCATTCTGAC 59.263 55.000 0.00 0.00 45.72 3.51
31 32 1.386533 CATGTCCAGCCATTCTGACC 58.613 55.000 0.00 0.00 45.72 4.02
32 33 0.994247 ATGTCCAGCCATTCTGACCA 59.006 50.000 0.00 0.00 45.72 4.02
33 34 0.325933 TGTCCAGCCATTCTGACCAG 59.674 55.000 0.00 0.00 45.72 4.00
34 35 1.028868 GTCCAGCCATTCTGACCAGC 61.029 60.000 0.00 0.00 45.72 4.85
35 36 1.203441 TCCAGCCATTCTGACCAGCT 61.203 55.000 0.00 0.00 45.72 4.24
36 37 0.747283 CCAGCCATTCTGACCAGCTC 60.747 60.000 0.00 0.00 45.72 4.09
37 38 0.035725 CAGCCATTCTGACCAGCTCA 60.036 55.000 0.00 0.00 45.72 4.26
38 39 0.035630 AGCCATTCTGACCAGCTCAC 60.036 55.000 0.00 0.00 0.00 3.51
39 40 1.028868 GCCATTCTGACCAGCTCACC 61.029 60.000 0.00 0.00 0.00 4.02
40 41 0.617413 CCATTCTGACCAGCTCACCT 59.383 55.000 0.00 0.00 0.00 4.00
41 42 1.406614 CCATTCTGACCAGCTCACCTC 60.407 57.143 0.00 0.00 0.00 3.85
42 43 1.554160 CATTCTGACCAGCTCACCTCT 59.446 52.381 0.00 0.00 0.00 3.69
43 44 1.261480 TTCTGACCAGCTCACCTCTC 58.739 55.000 0.00 0.00 0.00 3.20
44 45 0.613292 TCTGACCAGCTCACCTCTCC 60.613 60.000 0.00 0.00 0.00 3.71
45 46 0.614415 CTGACCAGCTCACCTCTCCT 60.614 60.000 0.00 0.00 0.00 3.69
73 74 3.189285 GCATGTTCGCAATAAGGCAAAT 58.811 40.909 0.00 0.00 0.00 2.32
75 76 4.803088 GCATGTTCGCAATAAGGCAAATAA 59.197 37.500 0.00 0.00 0.00 1.40
76 77 5.290643 GCATGTTCGCAATAAGGCAAATAAA 59.709 36.000 0.00 0.00 0.00 1.40
284 285 2.158813 GGCTGGGGATTCGTCATTAGAA 60.159 50.000 0.00 0.00 0.00 2.10
294 295 6.258727 GGATTCGTCATTAGAAATGAGCAAGA 59.741 38.462 2.65 0.00 0.00 3.02
362 363 1.810755 CTCTGCATGCTGAAGCTTTGA 59.189 47.619 24.97 3.81 42.66 2.69
442 451 0.108472 CTGATTCCACGCAGCTGAGA 60.108 55.000 25.03 8.23 0.00 3.27
473 482 9.978044 CAGTGAATTCTAATGAGTATGATCTGA 57.022 33.333 7.05 0.00 0.00 3.27
580 589 2.766313 TGTAACAGAGTGGCACATGTC 58.234 47.619 23.25 12.12 44.52 3.06
584 593 3.769739 ACAGAGTGGCACATGTCTTAA 57.230 42.857 21.41 0.00 44.52 1.85
632 641 4.019858 TGAAATGTGTGAAACCTGGTTGA 58.980 39.130 13.79 0.00 34.36 3.18
637 646 2.614057 GTGTGAAACCTGGTTGAGTCAG 59.386 50.000 13.79 0.00 34.36 3.51
1336 1353 5.333566 TTTTTGTCCATCTCTAGGGGTTT 57.666 39.130 0.00 0.00 0.00 3.27
1391 1411 1.450669 GGAATTCAGCCGGCGGTTA 60.451 57.895 28.82 15.62 0.00 2.85
1419 1439 4.020218 TGTCAGGAGAATTCGTTTCCAGAT 60.020 41.667 13.17 0.00 34.67 2.90
1440 1461 7.201644 CCAGATGTTTGTGCTGGTTATTAGTAG 60.202 40.741 0.00 0.00 43.25 2.57
1441 1462 7.334421 CAGATGTTTGTGCTGGTTATTAGTAGT 59.666 37.037 0.00 0.00 0.00 2.73
1442 1463 8.537016 AGATGTTTGTGCTGGTTATTAGTAGTA 58.463 33.333 0.00 0.00 0.00 1.82
1443 1464 9.326413 GATGTTTGTGCTGGTTATTAGTAGTAT 57.674 33.333 0.00 0.00 0.00 2.12
1499 1522 0.681733 CGGTATCCTGTGCTGGCTAT 59.318 55.000 0.00 0.00 0.00 2.97
1513 1537 4.635765 TGCTGGCTATGTGTCTTATGTTTC 59.364 41.667 0.00 0.00 0.00 2.78
1517 1541 7.575720 GCTGGCTATGTGTCTTATGTTTCTTTT 60.576 37.037 0.00 0.00 0.00 2.27
1539 1563 8.732746 TTTTGACCTATAGCTTACAAGGATTC 57.267 34.615 9.54 0.75 33.16 2.52
1573 1597 8.048514 GTCCTATCTTTAGGTCCTCGTAGATAT 58.951 40.741 13.73 0.00 44.75 1.63
1574 1598 8.266473 TCCTATCTTTAGGTCCTCGTAGATATC 58.734 40.741 13.73 0.00 44.75 1.63
1575 1599 8.047911 CCTATCTTTAGGTCCTCGTAGATATCA 58.952 40.741 5.32 0.00 40.28 2.15
1576 1600 7.690952 ATCTTTAGGTCCTCGTAGATATCAC 57.309 40.000 5.32 0.69 33.89 3.06
1577 1601 6.839454 TCTTTAGGTCCTCGTAGATATCACT 58.161 40.000 5.32 0.00 33.89 3.41
1578 1602 7.971201 TCTTTAGGTCCTCGTAGATATCACTA 58.029 38.462 5.32 0.00 33.89 2.74
1683 1741 1.134530 CACGCCGTCTCTGTTCGATC 61.135 60.000 0.00 0.00 0.00 3.69
1772 1830 7.369803 CACTTAATGATAACAAGTGCACTCT 57.630 36.000 21.95 10.47 41.75 3.24
1827 1885 6.438108 TGGCATTCCCAATATGGATAAATCTG 59.562 38.462 0.00 0.00 40.96 2.90
2110 2169 6.494835 AGCCTGTTTGATCCTGAATTAACTTT 59.505 34.615 0.00 0.00 0.00 2.66
2111 2170 7.015584 AGCCTGTTTGATCCTGAATTAACTTTT 59.984 33.333 0.00 0.00 0.00 2.27
2150 2212 2.778299 TGGAGATGTACTTTGCCACAC 58.222 47.619 0.00 0.00 0.00 3.82
2153 2221 2.668457 GAGATGTACTTTGCCACACTCG 59.332 50.000 0.00 0.00 0.00 4.18
2174 2242 2.805099 GTCTGATGCACTATGGCTAAGC 59.195 50.000 0.00 0.00 34.04 3.09
2318 2636 8.500753 TTATACTATTCGGCAAAATGTTCACT 57.499 30.769 0.00 0.00 0.00 3.41
2406 2724 3.491447 GCTTGCGAAAATATGGGAATGCT 60.491 43.478 0.00 0.00 0.00 3.79
2495 2813 8.495148 CCAGGTTTGTTATTCAAGTAATTTTGC 58.505 33.333 0.00 0.00 37.35 3.68
2501 2819 6.858993 TGTTATTCAAGTAATTTTGCACGACC 59.141 34.615 0.00 0.00 0.00 4.79
2524 2842 8.340618 ACCAGTGCAGGCTTATTTAATATATG 57.659 34.615 0.00 0.00 0.00 1.78
2651 2969 5.770162 ACAAGAGGTAAGCAGCAAAGTTATT 59.230 36.000 0.00 0.00 0.00 1.40
2707 3188 2.960384 CCCATTTAGAAGCATGCATGGA 59.040 45.455 26.06 6.22 34.21 3.41
2889 3488 4.518211 GTGGCATTAGGAATTCTGATGGAG 59.482 45.833 5.23 0.00 39.18 3.86
3101 3702 3.679389 ACCTGTTGTGCTTATGAAGGAG 58.321 45.455 0.00 0.00 0.00 3.69
3104 3705 4.946157 CCTGTTGTGCTTATGAAGGAGATT 59.054 41.667 0.00 0.00 0.00 2.40
3105 3706 5.163683 CCTGTTGTGCTTATGAAGGAGATTG 60.164 44.000 0.00 0.00 0.00 2.67
3170 3772 7.554959 TTACTGAGGAAGAAACTGGACTTAT 57.445 36.000 0.00 0.00 0.00 1.73
3184 3786 8.587952 AACTGGACTTATTGCAAAATGTTTAC 57.412 30.769 1.71 0.00 0.00 2.01
3251 3853 1.490490 GAAGGGCCCATGTGTGATCTA 59.510 52.381 27.56 0.00 0.00 1.98
3287 3889 0.759060 ACGATCGATGTGGATGGGGA 60.759 55.000 24.34 0.00 0.00 4.81
3305 3907 1.740025 GGAATTTCACCAAGAGGAGCG 59.260 52.381 0.00 0.00 38.69 5.03
3314 3916 1.269621 CCAAGAGGAGCGGGTTATACG 60.270 57.143 0.00 0.00 36.89 3.06
3323 3925 1.011333 CGGGTTATACGTTTGGGCAG 58.989 55.000 0.00 0.00 0.00 4.85
3329 3931 4.694037 GGTTATACGTTTGGGCAGGATATC 59.306 45.833 0.00 0.00 0.00 1.63
3332 3934 0.813610 CGTTTGGGCAGGATATCGCA 60.814 55.000 5.18 0.00 0.00 5.10
3521 4123 9.768662 TTCGTAGAAAATACCTACTGAAAAGTT 57.231 29.630 0.00 0.00 45.90 2.66
3528 4130 8.409358 AAATACCTACTGAAAAGTTTGAGCAT 57.591 30.769 0.00 0.00 0.00 3.79
3572 4174 9.187996 TGCTTGAATATCTAATGAACAAATCCA 57.812 29.630 0.00 0.00 0.00 3.41
3602 4205 1.403323 GTTAACTACTCCCTCCGTCCG 59.597 57.143 0.00 0.00 0.00 4.79
3603 4206 0.107017 TAACTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
3610 4213 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3611 4214 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3616 4219 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
3617 4220 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
3618 4221 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
3619 4222 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
3621 4224 3.258872 TCCGGAAATACTTGTCGGAGAAA 59.741 43.478 0.00 0.00 43.84 2.52
3622 4225 4.081309 TCCGGAAATACTTGTCGGAGAAAT 60.081 41.667 0.00 0.00 43.84 2.17
3627 4230 5.490139 AATACTTGTCGGAGAAATGCATG 57.510 39.130 0.00 0.00 39.69 4.06
3628 4231 2.783135 ACTTGTCGGAGAAATGCATGT 58.217 42.857 0.00 0.00 39.69 3.21
3630 4233 4.517285 ACTTGTCGGAGAAATGCATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
3631 4234 4.572389 ACTTGTCGGAGAAATGCATGTATC 59.428 41.667 0.00 0.08 39.69 2.24
3632 4235 3.123050 TGTCGGAGAAATGCATGTATCG 58.877 45.455 0.00 0.00 39.69 2.92
3635 4238 3.317993 TCGGAGAAATGCATGTATCGAGA 59.682 43.478 0.00 1.93 0.00 4.04
3636 4239 3.426859 CGGAGAAATGCATGTATCGAGAC 59.573 47.826 0.00 2.50 0.00 3.36
3637 4240 3.426859 GGAGAAATGCATGTATCGAGACG 59.573 47.826 0.00 0.00 0.00 4.18
3640 4243 5.773575 AGAAATGCATGTATCGAGACGTAT 58.226 37.500 4.29 0.00 0.00 3.06
3641 4244 6.216569 AGAAATGCATGTATCGAGACGTATT 58.783 36.000 4.29 0.00 0.00 1.89
3643 4246 6.844696 AATGCATGTATCGAGACGTATTTT 57.155 33.333 4.29 0.00 0.00 1.82
3644 4247 7.940178 AATGCATGTATCGAGACGTATTTTA 57.060 32.000 4.29 0.00 0.00 1.52
3646 4249 6.500910 TGCATGTATCGAGACGTATTTTAGT 58.499 36.000 4.29 0.00 0.00 2.24
3667 4270 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
3668 4271 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
3669 4272 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
3671 4274 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
3673 4276 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
3674 4277 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
3676 4279 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
3677 4280 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
3678 4281 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
3679 4282 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
3680 4283 4.092821 TCCATTTCTGCGACAAGTAATTCG 59.907 41.667 0.00 0.00 38.31 3.34
3700 4364 3.264104 CGCGGAGGGAGTATTTGTTTAA 58.736 45.455 0.00 0.00 46.37 1.52
3701 4365 3.063045 CGCGGAGGGAGTATTTGTTTAAC 59.937 47.826 0.00 0.00 46.37 2.01
3702 4366 3.376234 GCGGAGGGAGTATTTGTTTAACC 59.624 47.826 0.00 0.00 0.00 2.85
3703 4367 4.581868 CGGAGGGAGTATTTGTTTAACCA 58.418 43.478 0.00 0.00 0.00 3.67
3704 4368 5.005094 CGGAGGGAGTATTTGTTTAACCAA 58.995 41.667 0.00 0.00 0.00 3.67
3705 4369 5.650703 CGGAGGGAGTATTTGTTTAACCAAT 59.349 40.000 0.29 0.29 0.00 3.16
3721 4385 2.762327 ACCAATGGCATGAATCTGGAAC 59.238 45.455 19.35 0.00 0.00 3.62
3840 4504 1.412343 GCACAAAGCCTCCCTGAAAAA 59.588 47.619 0.00 0.00 37.23 1.94
3841 4505 2.546584 GCACAAAGCCTCCCTGAAAAAG 60.547 50.000 0.00 0.00 37.23 2.27
3943 4623 1.557832 GTGGGCCAACTGGTGTAGATA 59.442 52.381 8.40 0.00 37.57 1.98
3959 4639 6.493802 GGTGTAGATAACTGAGGTCCATATCA 59.506 42.308 0.00 0.00 0.00 2.15
3974 4654 7.294720 AGGTCCATATCATGTATGTAAGGGAAA 59.705 37.037 11.73 0.00 0.00 3.13
4058 4738 7.231317 TCACAAGGCAGATTTTAATTCTCTGTT 59.769 33.333 9.74 0.00 38.88 3.16
4070 4750 9.598517 TTTTAATTCTCTGTTGACTGCATTTTT 57.401 25.926 0.00 0.00 0.00 1.94
4106 4786 4.333926 GCAAAGTATCACTCATCCCACTTC 59.666 45.833 0.00 0.00 0.00 3.01
4108 4788 5.350504 AAGTATCACTCATCCCACTTCAG 57.649 43.478 0.00 0.00 0.00 3.02
4175 4855 5.991328 AACTACATCATCCTTTATGTGCG 57.009 39.130 0.00 0.00 36.96 5.34
4219 4899 9.132521 CTTACATAAGCAGAAAACCTTCAATTG 57.867 33.333 0.00 0.00 33.64 2.32
4249 4929 6.182039 TGCTTTGTTGTATCTTGTAGCATC 57.818 37.500 0.00 0.00 32.94 3.91
4340 5021 3.272574 ACTCTTCTGGTGGCATACATG 57.727 47.619 0.00 0.00 0.00 3.21
4910 5591 5.485620 TCTGCATCATCTGGATATAACTGC 58.514 41.667 0.00 0.00 33.95 4.40
4955 5636 1.134280 CCCTCCTGGTGATACTTGCAG 60.134 57.143 0.00 0.00 0.00 4.41
4973 5654 1.949525 CAGTTGCCCCTATGTGTATGC 59.050 52.381 0.00 0.00 0.00 3.14
4978 5659 1.133792 GCCCCTATGTGTATGCTGGTT 60.134 52.381 0.00 0.00 0.00 3.67
5034 5720 6.086011 TGGGAAATATATGTTTGGACCTGT 57.914 37.500 1.75 0.00 0.00 4.00
5068 5755 5.236478 CGGTGTTTGTCCTATAAATGCTAGG 59.764 44.000 0.00 0.00 37.66 3.02
5074 5761 4.219944 TGTCCTATAAATGCTAGGTAGGCG 59.780 45.833 0.00 0.00 37.58 5.52
5084 5771 4.154176 TGCTAGGTAGGCGTTAATATCCA 58.846 43.478 0.00 0.00 0.00 3.41
5090 5777 5.240844 AGGTAGGCGTTAATATCCATTTTGC 59.759 40.000 0.00 0.00 0.00 3.68
5111 5798 3.787634 GCATTGTGCAAACATACGATCTG 59.212 43.478 0.00 0.00 44.26 2.90
5119 5806 6.847792 GTGCAAACATACGATCTGTATTCATG 59.152 38.462 7.27 0.00 41.93 3.07
5123 5810 6.656632 ACATACGATCTGTATTCATGTCCT 57.343 37.500 7.27 0.00 41.93 3.85
5139 5826 6.413892 TCATGTCCTAGTAACATTTGCATCA 58.586 36.000 5.49 0.00 35.19 3.07
5156 5843 8.706492 TTTGCATCATTTTTCATATCCACTTC 57.294 30.769 0.00 0.00 0.00 3.01
5159 5846 8.533657 TGCATCATTTTTCATATCCACTTCTTT 58.466 29.630 0.00 0.00 0.00 2.52
5160 5847 9.374838 GCATCATTTTTCATATCCACTTCTTTT 57.625 29.630 0.00 0.00 0.00 2.27
5184 5871 9.762933 TTTAAAGAAGGGACAATTTCATTTCTG 57.237 29.630 0.00 0.00 32.00 3.02
5185 5872 5.397142 AGAAGGGACAATTTCATTTCTGC 57.603 39.130 0.00 0.00 31.00 4.26
5186 5873 4.221482 AGAAGGGACAATTTCATTTCTGCC 59.779 41.667 0.00 0.00 31.00 4.85
5187 5874 2.833943 AGGGACAATTTCATTTCTGCCC 59.166 45.455 0.00 0.00 0.00 5.36
5188 5875 2.093500 GGGACAATTTCATTTCTGCCCC 60.093 50.000 0.00 0.00 0.00 5.80
5189 5876 2.833943 GGACAATTTCATTTCTGCCCCT 59.166 45.455 0.00 0.00 0.00 4.79
5190 5877 4.023291 GGACAATTTCATTTCTGCCCCTA 58.977 43.478 0.00 0.00 0.00 3.53
5191 5878 4.466015 GGACAATTTCATTTCTGCCCCTAA 59.534 41.667 0.00 0.00 0.00 2.69
5192 5879 5.394553 GGACAATTTCATTTCTGCCCCTAAG 60.395 44.000 0.00 0.00 0.00 2.18
5193 5880 5.086621 ACAATTTCATTTCTGCCCCTAAGT 58.913 37.500 0.00 0.00 0.00 2.24
5194 5881 6.252995 ACAATTTCATTTCTGCCCCTAAGTA 58.747 36.000 0.00 0.00 0.00 2.24
5195 5882 6.378280 ACAATTTCATTTCTGCCCCTAAGTAG 59.622 38.462 0.00 0.00 0.00 2.57
5196 5883 5.772393 TTTCATTTCTGCCCCTAAGTAGA 57.228 39.130 0.00 0.00 0.00 2.59
5197 5884 5.772393 TTCATTTCTGCCCCTAAGTAGAA 57.228 39.130 0.00 0.00 36.80 2.10
5198 5885 5.099042 TCATTTCTGCCCCTAAGTAGAAC 57.901 43.478 0.00 0.00 38.07 3.01
5199 5886 3.994931 TTTCTGCCCCTAAGTAGAACC 57.005 47.619 0.00 0.00 38.07 3.62
5200 5887 2.942604 TCTGCCCCTAAGTAGAACCT 57.057 50.000 0.00 0.00 0.00 3.50
5201 5888 4.341863 TTCTGCCCCTAAGTAGAACCTA 57.658 45.455 0.00 0.00 34.12 3.08
5202 5889 3.639952 TCTGCCCCTAAGTAGAACCTAC 58.360 50.000 0.00 0.00 0.00 3.18
5203 5890 3.271490 TCTGCCCCTAAGTAGAACCTACT 59.729 47.826 1.09 1.09 0.00 2.57
5204 5891 4.479796 TCTGCCCCTAAGTAGAACCTACTA 59.520 45.833 7.03 0.00 0.00 1.82
5205 5892 4.540715 TGCCCCTAAGTAGAACCTACTAC 58.459 47.826 7.03 0.00 41.87 2.73
5216 5903 7.908453 AGTAGAACCTACTACTCAAATTTGCT 58.092 34.615 13.54 3.59 46.61 3.91
5217 5904 8.035984 AGTAGAACCTACTACTCAAATTTGCTC 58.964 37.037 13.54 0.00 46.61 4.26
5218 5905 6.174049 AGAACCTACTACTCAAATTTGCTCC 58.826 40.000 13.54 0.00 0.00 4.70
5219 5906 5.763876 ACCTACTACTCAAATTTGCTCCT 57.236 39.130 13.54 0.00 0.00 3.69
5220 5907 5.735766 ACCTACTACTCAAATTTGCTCCTC 58.264 41.667 13.54 0.00 0.00 3.71
5221 5908 5.485708 ACCTACTACTCAAATTTGCTCCTCT 59.514 40.000 13.54 0.00 0.00 3.69
5222 5909 5.814705 CCTACTACTCAAATTTGCTCCTCTG 59.185 44.000 13.54 2.15 0.00 3.35
5223 5910 4.006319 ACTACTCAAATTTGCTCCTCTGC 58.994 43.478 13.54 0.00 0.00 4.26
5224 5911 2.165998 ACTCAAATTTGCTCCTCTGCC 58.834 47.619 13.54 0.00 0.00 4.85
5225 5912 1.131883 CTCAAATTTGCTCCTCTGCCG 59.868 52.381 13.54 0.00 0.00 5.69
5226 5913 0.457337 CAAATTTGCTCCTCTGCCGC 60.457 55.000 5.01 0.00 0.00 6.53
5227 5914 0.610232 AAATTTGCTCCTCTGCCGCT 60.610 50.000 0.00 0.00 0.00 5.52
5228 5915 0.253044 AATTTGCTCCTCTGCCGCTA 59.747 50.000 0.00 0.00 0.00 4.26
5229 5916 0.179062 ATTTGCTCCTCTGCCGCTAG 60.179 55.000 0.00 0.00 0.00 3.42
5230 5917 1.544825 TTTGCTCCTCTGCCGCTAGT 61.545 55.000 0.00 0.00 0.00 2.57
5231 5918 1.544825 TTGCTCCTCTGCCGCTAGTT 61.545 55.000 0.00 0.00 0.00 2.24
5232 5919 1.520342 GCTCCTCTGCCGCTAGTTG 60.520 63.158 0.00 0.00 0.00 3.16
5233 5920 1.520342 CTCCTCTGCCGCTAGTTGC 60.520 63.158 0.00 0.00 38.57 4.17
5234 5921 2.512515 CCTCTGCCGCTAGTTGCC 60.513 66.667 3.63 0.00 38.78 4.52
5235 5922 2.512515 CTCTGCCGCTAGTTGCCC 60.513 66.667 3.63 0.00 38.78 5.36
5236 5923 3.003173 TCTGCCGCTAGTTGCCCT 61.003 61.111 3.63 0.00 38.78 5.19
5237 5924 2.045926 CTGCCGCTAGTTGCCCTT 60.046 61.111 3.63 0.00 38.78 3.95
5238 5925 1.220749 CTGCCGCTAGTTGCCCTTA 59.779 57.895 3.63 0.00 38.78 2.69
5239 5926 0.179045 CTGCCGCTAGTTGCCCTTAT 60.179 55.000 3.63 0.00 38.78 1.73
5240 5927 1.070134 CTGCCGCTAGTTGCCCTTATA 59.930 52.381 3.63 0.00 38.78 0.98
5241 5928 1.070134 TGCCGCTAGTTGCCCTTATAG 59.930 52.381 3.63 0.00 38.78 1.31
5242 5929 1.343465 GCCGCTAGTTGCCCTTATAGA 59.657 52.381 0.00 0.00 38.78 1.98
5243 5930 2.224209 GCCGCTAGTTGCCCTTATAGAA 60.224 50.000 0.00 0.00 38.78 2.10
5244 5931 3.743269 GCCGCTAGTTGCCCTTATAGAAA 60.743 47.826 0.00 0.00 38.78 2.52
5245 5932 4.642429 CCGCTAGTTGCCCTTATAGAAAT 58.358 43.478 0.00 0.00 38.78 2.17
5246 5933 4.452455 CCGCTAGTTGCCCTTATAGAAATG 59.548 45.833 0.00 0.00 38.78 2.32
5247 5934 5.057149 CGCTAGTTGCCCTTATAGAAATGT 58.943 41.667 0.00 0.00 38.78 2.71
5248 5935 5.177696 CGCTAGTTGCCCTTATAGAAATGTC 59.822 44.000 0.00 0.00 38.78 3.06
5249 5936 6.292150 GCTAGTTGCCCTTATAGAAATGTCT 58.708 40.000 0.00 0.00 35.14 3.41
5250 5937 6.768381 GCTAGTTGCCCTTATAGAAATGTCTT 59.232 38.462 0.00 0.00 33.61 3.01
5251 5938 7.283354 GCTAGTTGCCCTTATAGAAATGTCTTT 59.717 37.037 0.00 0.00 33.61 2.52
5252 5939 7.631717 AGTTGCCCTTATAGAAATGTCTTTC 57.368 36.000 0.00 0.00 40.95 2.62
5264 5951 4.483476 AATGTCTTTCTGCGTTGTTACC 57.517 40.909 0.00 0.00 0.00 2.85
5265 5952 1.862201 TGTCTTTCTGCGTTGTTACCG 59.138 47.619 0.00 0.00 0.00 4.02
5280 5967 2.593436 CCGCCCGGTCAAACAACT 60.593 61.111 0.00 0.00 0.00 3.16
5281 5968 2.190841 CCGCCCGGTCAAACAACTT 61.191 57.895 0.00 0.00 0.00 2.66
5282 5969 1.730451 CCGCCCGGTCAAACAACTTT 61.730 55.000 0.00 0.00 0.00 2.66
5283 5970 0.593773 CGCCCGGTCAAACAACTTTG 60.594 55.000 0.00 0.00 38.56 2.77
5284 5971 0.741915 GCCCGGTCAAACAACTTTGA 59.258 50.000 0.00 0.00 42.93 2.69
5339 6026 6.843069 AAAAACTGAAATTTTGTGGGATCG 57.157 33.333 0.00 0.00 32.12 3.69
5340 6027 5.782893 AAACTGAAATTTTGTGGGATCGA 57.217 34.783 0.00 0.00 0.00 3.59
5341 6028 5.782893 AACTGAAATTTTGTGGGATCGAA 57.217 34.783 0.00 0.00 0.00 3.71
5342 6029 5.376854 ACTGAAATTTTGTGGGATCGAAG 57.623 39.130 0.00 0.00 0.00 3.79
5343 6030 4.218417 ACTGAAATTTTGTGGGATCGAAGG 59.782 41.667 0.00 0.00 0.00 3.46
5344 6031 4.148838 TGAAATTTTGTGGGATCGAAGGT 58.851 39.130 0.00 0.00 0.00 3.50
5345 6032 5.317808 TGAAATTTTGTGGGATCGAAGGTA 58.682 37.500 0.00 0.00 0.00 3.08
5346 6033 5.182380 TGAAATTTTGTGGGATCGAAGGTAC 59.818 40.000 0.00 0.00 0.00 3.34
5348 6035 3.604875 TTTGTGGGATCGAAGGTACTC 57.395 47.619 0.00 0.00 38.49 2.59
5349 6036 2.225382 TGTGGGATCGAAGGTACTCA 57.775 50.000 0.00 0.00 38.49 3.41
5350 6037 2.100197 TGTGGGATCGAAGGTACTCAG 58.900 52.381 0.00 0.00 38.49 3.35
5351 6038 1.409427 GTGGGATCGAAGGTACTCAGG 59.591 57.143 0.00 0.00 38.49 3.86
5352 6039 1.006758 TGGGATCGAAGGTACTCAGGT 59.993 52.381 0.00 0.00 38.49 4.00
5353 6040 2.108970 GGGATCGAAGGTACTCAGGTT 58.891 52.381 0.00 0.00 38.49 3.50
5354 6041 2.500504 GGGATCGAAGGTACTCAGGTTT 59.499 50.000 0.00 0.00 38.49 3.27
5355 6042 3.522553 GGATCGAAGGTACTCAGGTTTG 58.477 50.000 0.00 0.00 38.49 2.93
5356 6043 2.450609 TCGAAGGTACTCAGGTTTGC 57.549 50.000 0.00 0.00 38.49 3.68
5357 6044 1.689813 TCGAAGGTACTCAGGTTTGCA 59.310 47.619 0.00 0.00 38.49 4.08
5358 6045 2.103432 TCGAAGGTACTCAGGTTTGCAA 59.897 45.455 0.00 0.00 38.49 4.08
5359 6046 2.480419 CGAAGGTACTCAGGTTTGCAAG 59.520 50.000 0.00 0.00 38.49 4.01
5360 6047 2.568623 AGGTACTCAGGTTTGCAAGG 57.431 50.000 0.00 0.00 0.00 3.61
5361 6048 1.774856 AGGTACTCAGGTTTGCAAGGT 59.225 47.619 0.00 0.00 0.00 3.50
5362 6049 1.880027 GGTACTCAGGTTTGCAAGGTG 59.120 52.381 0.00 0.00 0.00 4.00
5363 6050 1.266989 GTACTCAGGTTTGCAAGGTGC 59.733 52.381 0.00 0.00 45.29 5.01
5373 6060 3.294079 GCAAGGTGCATGCAAGTTT 57.706 47.368 24.58 13.99 44.26 2.66
5374 6061 1.585297 GCAAGGTGCATGCAAGTTTT 58.415 45.000 24.58 11.40 44.26 2.43
5375 6062 1.528161 GCAAGGTGCATGCAAGTTTTC 59.472 47.619 24.58 8.71 44.26 2.29
5376 6063 2.823984 CAAGGTGCATGCAAGTTTTCA 58.176 42.857 24.58 0.00 0.00 2.69
5377 6064 3.395639 CAAGGTGCATGCAAGTTTTCAT 58.604 40.909 24.58 3.08 0.00 2.57
5378 6065 3.034721 AGGTGCATGCAAGTTTTCATG 57.965 42.857 24.58 9.44 42.08 3.07
5384 6071 4.640805 CATGCAAGTTTTCATGCTGTTC 57.359 40.909 0.00 0.00 43.75 3.18
5385 6072 2.730069 TGCAAGTTTTCATGCTGTTCG 58.270 42.857 0.00 0.00 43.75 3.95
5386 6073 2.053627 GCAAGTTTTCATGCTGTTCGG 58.946 47.619 0.00 0.00 40.75 4.30
5387 6074 2.664916 CAAGTTTTCATGCTGTTCGGG 58.335 47.619 0.00 0.00 0.00 5.14
5388 6075 0.598065 AGTTTTCATGCTGTTCGGGC 59.402 50.000 0.00 0.00 0.00 6.13
5389 6076 0.313672 GTTTTCATGCTGTTCGGGCA 59.686 50.000 0.00 0.00 44.05 5.36
5391 6078 1.255882 TTTCATGCTGTTCGGGCATT 58.744 45.000 0.00 0.00 46.62 3.56
5392 6079 0.810648 TTCATGCTGTTCGGGCATTC 59.189 50.000 0.00 0.00 46.62 2.67
5393 6080 1.031571 TCATGCTGTTCGGGCATTCC 61.032 55.000 0.00 0.00 46.62 3.01
5394 6081 1.001020 ATGCTGTTCGGGCATTCCA 60.001 52.632 0.00 0.00 46.62 3.53
5395 6082 1.033746 ATGCTGTTCGGGCATTCCAG 61.034 55.000 0.00 0.00 46.62 3.86
5396 6083 2.409870 GCTGTTCGGGCATTCCAGG 61.410 63.158 0.00 0.00 34.36 4.45
5397 6084 1.299648 CTGTTCGGGCATTCCAGGA 59.700 57.895 0.00 0.00 34.36 3.86
5398 6085 0.745845 CTGTTCGGGCATTCCAGGAG 60.746 60.000 0.00 0.00 34.36 3.69
5399 6086 2.115291 GTTCGGGCATTCCAGGAGC 61.115 63.158 0.00 0.00 34.36 4.70
5400 6087 2.300967 TTCGGGCATTCCAGGAGCT 61.301 57.895 0.89 0.00 34.36 4.09
5401 6088 2.203126 CGGGCATTCCAGGAGCTC 60.203 66.667 4.71 4.71 34.36 4.09
5402 6089 2.203126 GGGCATTCCAGGAGCTCG 60.203 66.667 7.83 0.00 35.00 5.03
5403 6090 2.586792 GGCATTCCAGGAGCTCGT 59.413 61.111 7.83 5.12 0.00 4.18
5404 6091 1.686325 GGGCATTCCAGGAGCTCGTA 61.686 60.000 8.91 0.00 35.00 3.43
5405 6092 0.249657 GGCATTCCAGGAGCTCGTAG 60.250 60.000 8.91 1.50 0.00 3.51
5406 6093 0.878086 GCATTCCAGGAGCTCGTAGC 60.878 60.000 8.91 5.11 42.84 3.58
5407 6094 0.249657 CATTCCAGGAGCTCGTAGCC 60.250 60.000 8.91 0.00 43.77 3.93
5408 6095 0.687757 ATTCCAGGAGCTCGTAGCCA 60.688 55.000 8.91 0.00 43.77 4.75
5409 6096 0.902984 TTCCAGGAGCTCGTAGCCAA 60.903 55.000 8.91 0.00 43.77 4.52
5410 6097 1.142748 CCAGGAGCTCGTAGCCAAG 59.857 63.158 8.91 0.00 43.77 3.61
5411 6098 1.142748 CAGGAGCTCGTAGCCAAGG 59.857 63.158 8.91 0.00 43.77 3.61
5412 6099 1.000486 AGGAGCTCGTAGCCAAGGA 60.000 57.895 7.25 0.00 43.77 3.36
5413 6100 0.614979 AGGAGCTCGTAGCCAAGGAA 60.615 55.000 7.25 0.00 43.77 3.36
5414 6101 0.249398 GGAGCTCGTAGCCAAGGAAA 59.751 55.000 7.83 0.00 43.77 3.13
5415 6102 1.338769 GGAGCTCGTAGCCAAGGAAAA 60.339 52.381 7.83 0.00 43.77 2.29
5416 6103 2.423577 GAGCTCGTAGCCAAGGAAAAA 58.576 47.619 0.00 0.00 43.77 1.94
5417 6104 2.152016 AGCTCGTAGCCAAGGAAAAAC 58.848 47.619 3.66 0.00 43.77 2.43
5418 6105 1.877443 GCTCGTAGCCAAGGAAAAACA 59.123 47.619 0.00 0.00 34.48 2.83
5419 6106 2.095718 GCTCGTAGCCAAGGAAAAACAG 60.096 50.000 0.00 0.00 34.48 3.16
5420 6107 3.139077 CTCGTAGCCAAGGAAAAACAGT 58.861 45.455 0.00 0.00 0.00 3.55
5421 6108 4.312443 CTCGTAGCCAAGGAAAAACAGTA 58.688 43.478 0.00 0.00 0.00 2.74
5422 6109 4.706035 TCGTAGCCAAGGAAAAACAGTAA 58.294 39.130 0.00 0.00 0.00 2.24
5423 6110 5.124645 TCGTAGCCAAGGAAAAACAGTAAA 58.875 37.500 0.00 0.00 0.00 2.01
5424 6111 5.766174 TCGTAGCCAAGGAAAAACAGTAAAT 59.234 36.000 0.00 0.00 0.00 1.40
5425 6112 6.935771 TCGTAGCCAAGGAAAAACAGTAAATA 59.064 34.615 0.00 0.00 0.00 1.40
5426 6113 7.608761 TCGTAGCCAAGGAAAAACAGTAAATAT 59.391 33.333 0.00 0.00 0.00 1.28
5427 6114 7.696453 CGTAGCCAAGGAAAAACAGTAAATATG 59.304 37.037 0.00 0.00 0.00 1.78
5428 6115 7.539034 AGCCAAGGAAAAACAGTAAATATGT 57.461 32.000 0.00 0.00 0.00 2.29
5429 6116 8.644374 AGCCAAGGAAAAACAGTAAATATGTA 57.356 30.769 0.00 0.00 0.00 2.29
5430 6117 9.255029 AGCCAAGGAAAAACAGTAAATATGTAT 57.745 29.630 0.00 0.00 0.00 2.29
5431 6118 9.301153 GCCAAGGAAAAACAGTAAATATGTATG 57.699 33.333 0.00 0.00 0.00 2.39
5432 6119 9.301153 CCAAGGAAAAACAGTAAATATGTATGC 57.699 33.333 0.00 0.00 0.00 3.14
5433 6120 9.301153 CAAGGAAAAACAGTAAATATGTATGCC 57.699 33.333 0.00 0.00 0.00 4.40
5434 6121 8.823220 AGGAAAAACAGTAAATATGTATGCCT 57.177 30.769 0.00 0.00 0.00 4.75
5435 6122 8.686334 AGGAAAAACAGTAAATATGTATGCCTG 58.314 33.333 0.00 0.00 28.98 4.85
5436 6123 8.466798 GGAAAAACAGTAAATATGTATGCCTGT 58.533 33.333 0.00 0.00 33.40 4.00
5437 6124 9.289303 GAAAAACAGTAAATATGTATGCCTGTG 57.711 33.333 0.00 0.00 32.45 3.66
5438 6125 8.574251 AAAACAGTAAATATGTATGCCTGTGA 57.426 30.769 0.00 0.00 32.45 3.58
5439 6126 8.574251 AAACAGTAAATATGTATGCCTGTGAA 57.426 30.769 0.00 0.00 32.45 3.18
5440 6127 7.553881 ACAGTAAATATGTATGCCTGTGAAC 57.446 36.000 0.00 0.00 31.01 3.18
5441 6128 7.338710 ACAGTAAATATGTATGCCTGTGAACT 58.661 34.615 0.00 0.00 31.01 3.01
5442 6129 8.482943 ACAGTAAATATGTATGCCTGTGAACTA 58.517 33.333 0.00 0.00 31.01 2.24
5443 6130 8.765219 CAGTAAATATGTATGCCTGTGAACTAC 58.235 37.037 0.00 0.00 0.00 2.73
5444 6131 8.705594 AGTAAATATGTATGCCTGTGAACTACT 58.294 33.333 0.00 0.00 0.00 2.57
5445 6132 9.326413 GTAAATATGTATGCCTGTGAACTACTT 57.674 33.333 0.00 0.00 0.00 2.24
5446 6133 8.438676 AAATATGTATGCCTGTGAACTACTTC 57.561 34.615 0.00 0.00 0.00 3.01
5447 6134 4.882842 TGTATGCCTGTGAACTACTTCA 57.117 40.909 0.00 0.00 33.76 3.02
5448 6135 5.222079 TGTATGCCTGTGAACTACTTCAA 57.778 39.130 0.00 0.00 38.17 2.69
5449 6136 5.616270 TGTATGCCTGTGAACTACTTCAAA 58.384 37.500 0.00 0.00 38.17 2.69
5450 6137 6.058833 TGTATGCCTGTGAACTACTTCAAAA 58.941 36.000 0.00 0.00 38.17 2.44
5451 6138 6.544197 TGTATGCCTGTGAACTACTTCAAAAA 59.456 34.615 0.00 0.00 38.17 1.94
5497 6184 5.804944 TGAAAATTTTCAGGCATCCAAGA 57.195 34.783 26.01 2.75 41.88 3.02
5498 6185 6.363167 TGAAAATTTTCAGGCATCCAAGAT 57.637 33.333 26.01 0.00 41.88 2.40
5499 6186 6.167685 TGAAAATTTTCAGGCATCCAAGATG 58.832 36.000 26.01 0.09 41.88 2.90
5500 6187 3.814005 ATTTTCAGGCATCCAAGATGC 57.186 42.857 18.97 18.97 43.85 3.91
5501 6188 2.519771 TTTCAGGCATCCAAGATGCT 57.480 45.000 24.33 11.23 44.02 3.79
5502 6189 2.048444 TTCAGGCATCCAAGATGCTC 57.952 50.000 24.33 16.20 44.02 4.26
5503 6190 0.913924 TCAGGCATCCAAGATGCTCA 59.086 50.000 24.33 9.63 44.02 4.26
5504 6191 1.022735 CAGGCATCCAAGATGCTCAC 58.977 55.000 24.33 11.53 44.02 3.51
5505 6192 0.463295 AGGCATCCAAGATGCTCACG 60.463 55.000 24.33 0.00 44.02 4.35
5506 6193 0.745845 GGCATCCAAGATGCTCACGT 60.746 55.000 24.33 0.00 44.02 4.49
5507 6194 0.376152 GCATCCAAGATGCTCACGTG 59.624 55.000 19.69 9.94 41.52 4.49
5508 6195 0.376152 CATCCAAGATGCTCACGTGC 59.624 55.000 11.67 0.00 0.00 5.34
5509 6196 1.086067 ATCCAAGATGCTCACGTGCG 61.086 55.000 11.67 5.77 35.36 5.34
5510 6197 2.029288 CCAAGATGCTCACGTGCGT 61.029 57.895 11.67 0.45 35.36 5.24
5511 6198 0.735978 CCAAGATGCTCACGTGCGTA 60.736 55.000 11.67 4.31 35.36 4.42
5512 6199 1.067693 CAAGATGCTCACGTGCGTAA 58.932 50.000 11.67 0.00 35.36 3.18
5513 6200 1.059692 CAAGATGCTCACGTGCGTAAG 59.940 52.381 11.67 3.92 35.36 2.34
5514 6201 0.458543 AGATGCTCACGTGCGTAAGG 60.459 55.000 11.67 0.00 35.36 2.69
5515 6202 0.736325 GATGCTCACGTGCGTAAGGT 60.736 55.000 11.67 0.00 35.36 3.50
5516 6203 0.736325 ATGCTCACGTGCGTAAGGTC 60.736 55.000 11.67 0.00 35.36 3.85
5517 6204 1.080705 GCTCACGTGCGTAAGGTCT 60.081 57.895 11.67 0.00 38.28 3.85
5518 6205 1.344942 GCTCACGTGCGTAAGGTCTG 61.345 60.000 11.67 0.00 38.28 3.51
5519 6206 0.039437 CTCACGTGCGTAAGGTCTGT 60.039 55.000 11.67 0.00 38.28 3.41
5520 6207 0.318360 TCACGTGCGTAAGGTCTGTG 60.318 55.000 11.67 0.00 38.28 3.66
5521 6208 0.596600 CACGTGCGTAAGGTCTGTGT 60.597 55.000 0.82 0.00 38.28 3.72
5522 6209 0.953727 ACGTGCGTAAGGTCTGTGTA 59.046 50.000 0.00 0.00 38.28 2.90
5523 6210 1.337703 ACGTGCGTAAGGTCTGTGTAA 59.662 47.619 0.00 0.00 38.28 2.41
5524 6211 2.223782 ACGTGCGTAAGGTCTGTGTAAA 60.224 45.455 0.00 0.00 38.28 2.01
5525 6212 2.796031 CGTGCGTAAGGTCTGTGTAAAA 59.204 45.455 0.00 0.00 38.28 1.52
5526 6213 3.430895 CGTGCGTAAGGTCTGTGTAAAAT 59.569 43.478 0.00 0.00 38.28 1.82
5527 6214 4.084223 CGTGCGTAAGGTCTGTGTAAAATT 60.084 41.667 0.00 0.00 38.28 1.82
5528 6215 5.559417 CGTGCGTAAGGTCTGTGTAAAATTT 60.559 40.000 0.00 0.00 38.28 1.82
5529 6216 6.203647 GTGCGTAAGGTCTGTGTAAAATTTT 58.796 36.000 8.75 8.75 38.28 1.82
5530 6217 6.141685 GTGCGTAAGGTCTGTGTAAAATTTTG 59.858 38.462 13.76 0.00 38.28 2.44
5531 6218 6.183360 TGCGTAAGGTCTGTGTAAAATTTTGT 60.183 34.615 13.76 0.00 38.28 2.83
5532 6219 6.693978 GCGTAAGGTCTGTGTAAAATTTTGTT 59.306 34.615 13.76 0.00 38.28 2.83
5533 6220 7.305763 GCGTAAGGTCTGTGTAAAATTTTGTTG 60.306 37.037 13.76 0.28 38.28 3.33
5534 6221 7.698970 CGTAAGGTCTGTGTAAAATTTTGTTGT 59.301 33.333 13.76 0.00 0.00 3.32
5535 6222 7.826260 AAGGTCTGTGTAAAATTTTGTTGTG 57.174 32.000 13.76 1.91 0.00 3.33
5536 6223 6.930731 AGGTCTGTGTAAAATTTTGTTGTGT 58.069 32.000 13.76 0.00 0.00 3.72
5537 6224 7.382898 AGGTCTGTGTAAAATTTTGTTGTGTT 58.617 30.769 13.76 0.00 0.00 3.32
5538 6225 7.875554 AGGTCTGTGTAAAATTTTGTTGTGTTT 59.124 29.630 13.76 0.00 0.00 2.83
5539 6226 7.954786 GGTCTGTGTAAAATTTTGTTGTGTTTG 59.045 33.333 13.76 0.00 0.00 2.93
5540 6227 7.954786 GTCTGTGTAAAATTTTGTTGTGTTTGG 59.045 33.333 13.76 0.00 0.00 3.28
5541 6228 7.872993 TCTGTGTAAAATTTTGTTGTGTTTGGA 59.127 29.630 13.76 0.00 0.00 3.53
5542 6229 7.797819 TGTGTAAAATTTTGTTGTGTTTGGAC 58.202 30.769 13.76 0.00 0.00 4.02
5543 6230 7.441157 TGTGTAAAATTTTGTTGTGTTTGGACA 59.559 29.630 13.76 2.54 0.00 4.02
5544 6231 8.447053 GTGTAAAATTTTGTTGTGTTTGGACAT 58.553 29.630 13.76 0.00 38.23 3.06
5545 6232 9.003658 TGTAAAATTTTGTTGTGTTTGGACATT 57.996 25.926 13.76 0.00 38.23 2.71
5546 6233 9.271738 GTAAAATTTTGTTGTGTTTGGACATTG 57.728 29.630 13.76 0.00 38.23 2.82
5547 6234 7.446001 AAATTTTGTTGTGTTTGGACATTGT 57.554 28.000 0.00 0.00 38.23 2.71
5548 6235 8.553459 AAATTTTGTTGTGTTTGGACATTGTA 57.447 26.923 0.00 0.00 38.23 2.41
5549 6236 7.769272 ATTTTGTTGTGTTTGGACATTGTAG 57.231 32.000 0.00 0.00 38.23 2.74
5550 6237 6.516739 TTTGTTGTGTTTGGACATTGTAGA 57.483 33.333 0.00 0.00 38.23 2.59
5551 6238 6.516739 TTGTTGTGTTTGGACATTGTAGAA 57.483 33.333 0.00 0.00 38.23 2.10
5552 6239 6.130298 TGTTGTGTTTGGACATTGTAGAAG 57.870 37.500 0.00 0.00 38.23 2.85
5553 6240 4.829064 TGTGTTTGGACATTGTAGAAGC 57.171 40.909 0.00 0.00 38.23 3.86
5554 6241 4.460263 TGTGTTTGGACATTGTAGAAGCT 58.540 39.130 0.00 0.00 38.23 3.74
5555 6242 4.515191 TGTGTTTGGACATTGTAGAAGCTC 59.485 41.667 0.00 0.00 38.23 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.027170 CTGGACATGCGTTGCCGAC 62.027 63.158 0.00 0.00 35.63 4.79
3 4 2.741985 CTGGACATGCGTTGCCGA 60.742 61.111 0.00 0.00 35.63 5.54
4 5 4.465512 GCTGGACATGCGTTGCCG 62.466 66.667 0.00 0.00 37.07 5.69
5 6 4.120331 GGCTGGACATGCGTTGCC 62.120 66.667 0.00 0.00 32.14 4.52
6 7 2.216750 AATGGCTGGACATGCGTTGC 62.217 55.000 0.00 0.00 0.00 4.17
7 8 0.179156 GAATGGCTGGACATGCGTTG 60.179 55.000 0.00 0.00 0.00 4.10
8 9 0.322816 AGAATGGCTGGACATGCGTT 60.323 50.000 0.00 0.00 31.36 4.84
9 10 1.028330 CAGAATGGCTGGACATGCGT 61.028 55.000 0.00 0.00 41.07 5.24
10 11 0.745486 TCAGAATGGCTGGACATGCG 60.745 55.000 0.00 0.00 44.98 4.73
11 12 0.737219 GTCAGAATGGCTGGACATGC 59.263 55.000 0.00 0.00 44.98 4.06
12 13 1.340308 TGGTCAGAATGGCTGGACATG 60.340 52.381 0.00 0.00 43.10 3.21
13 14 0.994247 TGGTCAGAATGGCTGGACAT 59.006 50.000 0.00 0.00 43.10 3.06
14 15 0.325933 CTGGTCAGAATGGCTGGACA 59.674 55.000 0.00 0.00 43.10 4.02
15 16 1.028868 GCTGGTCAGAATGGCTGGAC 61.029 60.000 1.65 0.00 43.10 4.02
16 17 1.203441 AGCTGGTCAGAATGGCTGGA 61.203 55.000 1.65 0.00 43.10 3.86
17 18 0.747283 GAGCTGGTCAGAATGGCTGG 60.747 60.000 1.28 0.00 43.10 4.85
18 19 0.035725 TGAGCTGGTCAGAATGGCTG 60.036 55.000 5.28 0.00 43.10 4.85
19 20 0.035630 GTGAGCTGGTCAGAATGGCT 60.036 55.000 10.21 0.00 43.10 4.75
20 21 1.028868 GGTGAGCTGGTCAGAATGGC 61.029 60.000 10.21 0.00 42.54 4.40
21 22 0.617413 AGGTGAGCTGGTCAGAATGG 59.383 55.000 10.21 0.00 35.13 3.16
22 23 1.554160 AGAGGTGAGCTGGTCAGAATG 59.446 52.381 10.21 0.00 35.13 2.67
23 24 1.830477 GAGAGGTGAGCTGGTCAGAAT 59.170 52.381 10.21 0.00 35.13 2.40
24 25 1.261480 GAGAGGTGAGCTGGTCAGAA 58.739 55.000 10.21 0.00 35.13 3.02
25 26 0.613292 GGAGAGGTGAGCTGGTCAGA 60.613 60.000 10.21 0.00 35.13 3.27
26 27 0.614415 AGGAGAGGTGAGCTGGTCAG 60.614 60.000 10.21 0.00 35.13 3.51
27 28 0.178921 AAGGAGAGGTGAGCTGGTCA 60.179 55.000 5.28 5.28 0.00 4.02
28 29 0.980423 AAAGGAGAGGTGAGCTGGTC 59.020 55.000 0.00 0.00 0.00 4.02
29 30 0.689623 CAAAGGAGAGGTGAGCTGGT 59.310 55.000 0.00 0.00 0.00 4.00
30 31 0.035630 CCAAAGGAGAGGTGAGCTGG 60.036 60.000 0.00 0.00 0.00 4.85
31 32 0.689623 ACCAAAGGAGAGGTGAGCTG 59.310 55.000 0.00 0.00 36.60 4.24
32 33 3.172208 ACCAAAGGAGAGGTGAGCT 57.828 52.632 0.00 0.00 36.60 4.09
37 38 0.038744 CATGCCACCAAAGGAGAGGT 59.961 55.000 0.00 0.00 39.10 3.85
38 39 0.038744 ACATGCCACCAAAGGAGAGG 59.961 55.000 0.00 0.00 0.00 3.69
39 40 1.815003 GAACATGCCACCAAAGGAGAG 59.185 52.381 0.00 0.00 0.00 3.20
40 41 1.881925 CGAACATGCCACCAAAGGAGA 60.882 52.381 0.00 0.00 0.00 3.71
41 42 0.523072 CGAACATGCCACCAAAGGAG 59.477 55.000 0.00 0.00 0.00 3.69
42 43 1.523154 GCGAACATGCCACCAAAGGA 61.523 55.000 0.00 0.00 0.00 3.36
43 44 1.080569 GCGAACATGCCACCAAAGG 60.081 57.895 0.00 0.00 0.00 3.11
44 45 0.031857 TTGCGAACATGCCACCAAAG 59.968 50.000 0.00 0.00 0.00 2.77
45 46 0.678395 ATTGCGAACATGCCACCAAA 59.322 45.000 0.00 0.00 0.00 3.28
147 148 4.908601 TGCTCCTTGATAGTCCTTTTGA 57.091 40.909 0.00 0.00 0.00 2.69
284 285 2.551721 CCATCGCCCTATCTTGCTCATT 60.552 50.000 0.00 0.00 0.00 2.57
294 295 2.429058 CTGCAGCCATCGCCCTAT 59.571 61.111 0.00 0.00 34.57 2.57
362 363 6.405538 CCATTTTTATGGCATACAACAAGGT 58.594 36.000 6.72 0.00 34.56 3.50
418 419 0.179215 GCTGCGTGGAATCAGTTTCG 60.179 55.000 0.00 0.00 34.98 3.46
442 451 5.184892 ACTCATTAGAATTCACTGCCCTT 57.815 39.130 8.44 0.00 0.00 3.95
473 482 9.080097 ACTCCTAATAATAGCTCTTATGTTCGT 57.920 33.333 5.22 0.00 0.00 3.85
538 547 1.071471 CCGAGGGCAAGACACAACT 59.929 57.895 0.00 0.00 0.00 3.16
580 589 6.183360 CCAAGTTAACTCCATACGCAGTTAAG 60.183 42.308 8.95 0.00 42.84 1.85
632 641 1.428869 ACAAAGTCTGGGAGCTGACT 58.571 50.000 0.00 0.00 44.40 3.41
637 646 3.402628 TTCAGTACAAAGTCTGGGAGC 57.597 47.619 0.00 0.00 33.13 4.70
727 736 0.893270 TGTTCTGCGAATTGGTGGGG 60.893 55.000 0.00 0.00 0.00 4.96
770 780 3.735029 GCTGTGCTGTGCTGCCTC 61.735 66.667 0.00 0.00 0.00 4.70
1221 1238 2.504175 GCCCATGAAGAGGTAGTTGGTA 59.496 50.000 0.00 0.00 0.00 3.25
1304 1321 0.516877 TGGACAAAAATCGAGCGCTG 59.483 50.000 18.48 7.71 0.00 5.18
1306 1323 1.398390 AGATGGACAAAAATCGAGCGC 59.602 47.619 0.00 0.00 0.00 5.92
1352 1369 9.712305 AATTCCGTGTATGATCTATAAAGAAGG 57.288 33.333 0.00 0.00 34.73 3.46
1367 1387 0.814010 GCCGGCTGAATTCCGTGTAT 60.814 55.000 22.15 0.00 45.09 2.29
1391 1411 5.412904 GGAAACGAATTCTCCTGACAAGAAT 59.587 40.000 3.52 0.00 43.58 2.40
1419 1439 8.098286 ACATACTACTAATAACCAGCACAAACA 58.902 33.333 0.00 0.00 0.00 2.83
1443 1464 9.727859 CTAGAGAGGTAATAGAAGCTACATACA 57.272 37.037 0.00 0.00 0.00 2.29
1499 1522 8.918202 ATAGGTCAAAAGAAACATAAGACACA 57.082 30.769 0.00 0.00 0.00 3.72
1513 1537 8.738645 AATCCTTGTAAGCTATAGGTCAAAAG 57.261 34.615 4.63 1.28 0.00 2.27
1517 1541 6.611642 ACAGAATCCTTGTAAGCTATAGGTCA 59.388 38.462 4.63 0.00 0.00 4.02
1566 1590 7.201839 GCCTACAGCCCTTATAGTGATATCTAC 60.202 44.444 3.98 1.06 34.35 2.59
1573 1597 3.330126 AGCCTACAGCCCTTATAGTGA 57.670 47.619 0.00 0.00 45.47 3.41
1574 1598 3.134804 ACAAGCCTACAGCCCTTATAGTG 59.865 47.826 0.00 0.00 45.47 2.74
1575 1599 3.385115 ACAAGCCTACAGCCCTTATAGT 58.615 45.455 0.00 0.00 45.47 2.12
1576 1600 4.561734 GCTACAAGCCTACAGCCCTTATAG 60.562 50.000 0.00 0.00 45.47 1.31
1577 1601 3.323979 GCTACAAGCCTACAGCCCTTATA 59.676 47.826 0.00 0.00 45.47 0.98
1578 1602 2.104963 GCTACAAGCCTACAGCCCTTAT 59.895 50.000 0.00 0.00 45.47 1.73
1663 1721 2.543687 ATCGAACAGAGACGGCGTGG 62.544 60.000 21.19 6.66 0.00 4.94
1667 1725 0.452184 TGAGATCGAACAGAGACGGC 59.548 55.000 0.00 0.00 0.00 5.68
1691 1749 6.821616 ATACATCTTCAGGTCTTGAGGAAT 57.178 37.500 0.77 0.00 44.04 3.01
1703 1761 8.984891 TTGCCAACAAAATTATACATCTTCAG 57.015 30.769 0.00 0.00 31.21 3.02
1760 1818 9.209175 CTAAAACTAAAGATAGAGTGCACTTGT 57.791 33.333 22.65 14.13 33.15 3.16
1763 1821 9.593134 CATCTAAAACTAAAGATAGAGTGCACT 57.407 33.333 21.88 21.88 31.25 4.40
1772 1830 9.547753 GATGGAGTGCATCTAAAACTAAAGATA 57.452 33.333 16.70 0.00 31.25 1.98
1827 1885 7.954248 CACGATCTGCATTAAGAGCAATATTAC 59.046 37.037 6.80 0.00 42.17 1.89
2111 2170 9.605275 CATCTCCAAGATTTAGTCAATTAGACA 57.395 33.333 9.64 0.00 40.40 3.41
2140 2202 1.462283 CATCAGACGAGTGTGGCAAAG 59.538 52.381 0.00 0.00 0.00 2.77
2150 2212 1.068281 AGCCATAGTGCATCAGACGAG 59.932 52.381 0.00 0.00 0.00 4.18
2153 2221 2.805099 GCTTAGCCATAGTGCATCAGAC 59.195 50.000 0.00 0.00 0.00 3.51
2406 2724 9.263446 AGGTCTGTAAAGTACTTCCATACATTA 57.737 33.333 15.59 7.60 0.00 1.90
2495 2813 0.391661 ATAAGCCTGCACTGGTCGTG 60.392 55.000 0.00 0.00 46.58 4.35
2501 2819 7.752239 GCACATATATTAAATAAGCCTGCACTG 59.248 37.037 0.00 0.00 0.00 3.66
2524 2842 2.423538 GTGTTTCCCATATGTCAGGCAC 59.576 50.000 1.24 2.14 0.00 5.01
2598 2916 5.188327 TCAAGAGCACGGATGTTATCTAG 57.812 43.478 0.00 0.00 0.00 2.43
2609 2927 0.855349 GTATGCGATCAAGAGCACGG 59.145 55.000 0.00 0.00 46.83 4.94
2651 2969 5.047021 AGAGCACTAGTTCATAAAGACAGCA 60.047 40.000 0.00 0.00 0.00 4.41
2707 3188 8.458843 GGTAATACAAATAGCAAATATCGCCAT 58.541 33.333 0.00 0.00 0.00 4.40
2840 3439 9.748708 CCTCATTGAACTAAATCAAGTTTTTCA 57.251 29.630 0.00 0.00 42.21 2.69
2903 3502 9.959721 ACTACCACAACTCAGTAATGATTTATT 57.040 29.630 0.00 0.00 0.00 1.40
3101 3702 8.132362 ACTCGAGACTTAACAGATACATCAATC 58.868 37.037 21.68 0.00 0.00 2.67
3104 3705 6.238130 CGACTCGAGACTTAACAGATACATCA 60.238 42.308 21.68 0.00 0.00 3.07
3105 3706 6.130723 CGACTCGAGACTTAACAGATACATC 58.869 44.000 21.68 0.00 0.00 3.06
3287 3889 1.614317 CCCGCTCCTCTTGGTGAAATT 60.614 52.381 0.00 0.00 34.23 1.82
3305 3907 1.065272 TCCTGCCCAAACGTATAACCC 60.065 52.381 0.00 0.00 0.00 4.11
3314 3916 0.663153 GTGCGATATCCTGCCCAAAC 59.337 55.000 0.00 0.00 0.00 2.93
3323 3925 3.181510 GGTTGAACTGTTGTGCGATATCC 60.182 47.826 0.00 0.00 0.00 2.59
3329 3931 2.289274 TGTATGGTTGAACTGTTGTGCG 59.711 45.455 0.00 0.00 0.00 5.34
3332 3934 5.841810 CCATTTGTATGGTTGAACTGTTGT 58.158 37.500 0.00 0.00 45.34 3.32
3521 4123 5.700832 ACTTTGACAGAACGATTATGCTCAA 59.299 36.000 0.00 0.00 0.00 3.02
3528 4130 5.525745 TCAAGCAACTTTGACAGAACGATTA 59.474 36.000 0.00 0.00 32.39 1.75
3570 4172 7.166167 AGGGAGTAGTTAACAATGTACTTTGG 58.834 38.462 21.54 7.59 0.00 3.28
3572 4174 7.392418 GGAGGGAGTAGTTAACAATGTACTTT 58.608 38.462 8.61 0.00 0.00 2.66
3602 4205 4.394920 TGCATTTCTCCGACAAGTATTTCC 59.605 41.667 0.00 0.00 0.00 3.13
3603 4206 5.545658 TGCATTTCTCCGACAAGTATTTC 57.454 39.130 0.00 0.00 0.00 2.17
3610 4213 3.555547 CGATACATGCATTTCTCCGACAA 59.444 43.478 0.00 0.00 0.00 3.18
3611 4214 3.123050 CGATACATGCATTTCTCCGACA 58.877 45.455 0.00 0.00 0.00 4.35
3616 4219 4.045104 ACGTCTCGATACATGCATTTCTC 58.955 43.478 0.00 0.00 0.00 2.87
3617 4220 4.046938 ACGTCTCGATACATGCATTTCT 57.953 40.909 0.00 0.00 0.00 2.52
3618 4221 6.453643 AATACGTCTCGATACATGCATTTC 57.546 37.500 0.00 0.00 0.00 2.17
3619 4222 6.844696 AAATACGTCTCGATACATGCATTT 57.155 33.333 0.00 0.00 0.00 2.32
3621 4224 7.145985 ACTAAAATACGTCTCGATACATGCAT 58.854 34.615 0.00 0.00 0.00 3.96
3622 4225 6.500910 ACTAAAATACGTCTCGATACATGCA 58.499 36.000 0.00 0.00 0.00 3.96
3630 4233 9.317936 TGTATCTAGAACTAAAATACGTCTCGA 57.682 33.333 0.00 0.00 0.00 4.04
3641 4244 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
3643 4246 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
3644 4247 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
3646 4249 6.183360 TGTCGCAGAAATGGATGTATCTAGAA 60.183 38.462 0.00 0.00 39.69 2.10
3651 4254 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
3653 4256 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
3655 4258 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
3657 4260 4.092821 CGAATTACTTGTCGCAGAAATGGA 59.907 41.667 0.00 0.00 39.69 3.41
3658 4261 4.334443 CGAATTACTTGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
3667 4270 0.921347 CCTCCGCGAATTACTTGTCG 59.079 55.000 8.23 0.00 40.24 4.35
3668 4271 1.134907 TCCCTCCGCGAATTACTTGTC 60.135 52.381 8.23 0.00 0.00 3.18
3669 4272 0.899720 TCCCTCCGCGAATTACTTGT 59.100 50.000 8.23 0.00 0.00 3.16
3671 4274 1.192428 ACTCCCTCCGCGAATTACTT 58.808 50.000 8.23 0.00 0.00 2.24
3673 4276 3.382048 AATACTCCCTCCGCGAATTAC 57.618 47.619 8.23 0.00 0.00 1.89
3674 4277 3.133362 ACAAATACTCCCTCCGCGAATTA 59.867 43.478 8.23 0.00 0.00 1.40
3676 4279 1.485066 ACAAATACTCCCTCCGCGAAT 59.515 47.619 8.23 0.00 0.00 3.34
3677 4280 0.899720 ACAAATACTCCCTCCGCGAA 59.100 50.000 8.23 0.00 0.00 4.70
3678 4281 0.899720 AACAAATACTCCCTCCGCGA 59.100 50.000 8.23 0.00 0.00 5.87
3679 4282 1.734163 AAACAAATACTCCCTCCGCG 58.266 50.000 0.00 0.00 0.00 6.46
3680 4283 3.376234 GGTTAAACAAATACTCCCTCCGC 59.624 47.826 0.00 0.00 0.00 5.54
3700 4364 2.762327 GTTCCAGATTCATGCCATTGGT 59.238 45.455 4.26 0.00 0.00 3.67
3701 4365 3.028850 AGTTCCAGATTCATGCCATTGG 58.971 45.455 0.00 0.00 0.00 3.16
3702 4366 4.730949 AAGTTCCAGATTCATGCCATTG 57.269 40.909 0.00 0.00 0.00 2.82
3703 4367 4.161001 GGAAAGTTCCAGATTCATGCCATT 59.839 41.667 5.16 0.00 46.76 3.16
3704 4368 3.703052 GGAAAGTTCCAGATTCATGCCAT 59.297 43.478 5.16 0.00 46.76 4.40
3705 4369 3.091545 GGAAAGTTCCAGATTCATGCCA 58.908 45.455 5.16 0.00 46.76 4.92
3721 4385 9.863845 TTAACTTTTAACCAAAGAACTGGAAAG 57.136 29.630 1.36 0.00 44.40 2.62
3858 4527 6.070194 TGGTCCCTCCAGAAACTTAGATAAAG 60.070 42.308 0.00 0.00 41.93 1.85
3943 4623 6.753913 ACATACATGATATGGACCTCAGTT 57.246 37.500 0.00 0.00 33.60 3.16
3959 4639 7.176690 CCTTTGTCTGTTTTCCCTTACATACAT 59.823 37.037 0.00 0.00 33.30 2.29
3974 4654 3.199071 TCCACTGTACACCTTTGTCTGTT 59.801 43.478 0.00 0.00 37.15 3.16
4058 4738 5.070180 TCAATTCCCTTGAAAAATGCAGTCA 59.930 36.000 0.00 0.00 40.92 3.41
4070 4750 5.415701 GTGATACTTTGCTCAATTCCCTTGA 59.584 40.000 0.00 0.00 41.61 3.02
4106 4786 7.490725 CCCTAATATCTTTCTGATGATACGCTG 59.509 40.741 3.94 0.00 36.65 5.18
4108 4788 7.548097 TCCCTAATATCTTTCTGATGATACGC 58.452 38.462 3.94 0.00 36.65 4.42
4157 4837 2.874701 GCTCGCACATAAAGGATGATGT 59.125 45.455 0.00 0.00 39.06 3.06
4217 4897 2.593346 ACAACAAAGCAAATCGCCAA 57.407 40.000 0.00 0.00 44.04 4.52
4219 4899 4.096732 AGATACAACAAAGCAAATCGCC 57.903 40.909 0.00 0.00 44.04 5.54
4249 4929 7.960738 CGACTGTTAATTTAATAACCACAGGTG 59.039 37.037 8.00 0.00 35.34 4.00
4340 5021 7.342026 AGAACATGGTAATTATTCAACCTTCCC 59.658 37.037 0.00 0.00 34.23 3.97
4377 5058 4.260212 CCGTTACAACATTCTTATCCTGCG 60.260 45.833 0.00 0.00 0.00 5.18
4447 5128 6.380846 CCATGTTTTCCCCAATCTCAAGAATA 59.619 38.462 0.00 0.00 0.00 1.75
4704 5385 4.166523 TCTCGTGTAAAGATCAAGAAGCG 58.833 43.478 0.00 0.00 0.00 4.68
4711 5392 8.708742 CAACTTTAACATCTCGTGTAAAGATCA 58.291 33.333 8.57 0.00 41.14 2.92
4762 5443 5.177327 CCAACAATACAAAATGGAAGCACAC 59.823 40.000 0.00 0.00 32.82 3.82
4910 5591 5.415701 CCTCCCCGTCCATATGAAAATTATG 59.584 44.000 3.65 0.00 0.00 1.90
4955 5636 1.949525 CAGCATACACATAGGGGCAAC 59.050 52.381 0.00 0.00 0.00 4.17
4973 5654 8.735315 TCAAACACATTATAATACACCAACCAG 58.265 33.333 0.00 0.00 0.00 4.00
4978 5659 8.898761 GGACATCAAACACATTATAATACACCA 58.101 33.333 0.00 0.00 0.00 4.17
5068 5755 6.067263 TGCAAAATGGATATTAACGCCTAC 57.933 37.500 0.00 0.00 0.00 3.18
5090 5777 4.973396 ACAGATCGTATGTTTGCACAATG 58.027 39.130 0.00 0.00 36.16 2.82
5104 5791 7.284716 TGTTACTAGGACATGAATACAGATCGT 59.715 37.037 0.00 0.00 0.00 3.73
5105 5792 7.649057 TGTTACTAGGACATGAATACAGATCG 58.351 38.462 0.00 0.00 0.00 3.69
5111 5798 8.208718 TGCAAATGTTACTAGGACATGAATAC 57.791 34.615 12.90 4.89 37.76 1.89
5119 5806 8.986477 AAAAATGATGCAAATGTTACTAGGAC 57.014 30.769 0.00 0.00 0.00 3.85
5159 5846 7.872483 GCAGAAATGAAATTGTCCCTTCTTTAA 59.128 33.333 0.00 0.00 36.10 1.52
5160 5847 7.378181 GCAGAAATGAAATTGTCCCTTCTTTA 58.622 34.615 0.00 0.00 36.10 1.85
5161 5848 6.226052 GCAGAAATGAAATTGTCCCTTCTTT 58.774 36.000 0.00 0.00 36.10 2.52
5162 5849 5.279657 GGCAGAAATGAAATTGTCCCTTCTT 60.280 40.000 0.00 0.00 36.10 2.52
5163 5850 4.221482 GGCAGAAATGAAATTGTCCCTTCT 59.779 41.667 0.00 0.00 36.10 2.85
5164 5851 4.498241 GGCAGAAATGAAATTGTCCCTTC 58.502 43.478 0.00 0.00 36.10 3.46
5165 5852 3.261643 GGGCAGAAATGAAATTGTCCCTT 59.738 43.478 0.00 0.00 36.10 3.95
5166 5853 2.833943 GGGCAGAAATGAAATTGTCCCT 59.166 45.455 0.00 0.00 36.10 4.20
5167 5854 3.251479 GGGCAGAAATGAAATTGTCCC 57.749 47.619 0.00 0.00 36.10 4.46
5168 5855 2.833943 AGGGGCAGAAATGAAATTGTCC 59.166 45.455 0.00 0.00 36.10 4.02
5169 5856 5.185828 ACTTAGGGGCAGAAATGAAATTGTC 59.814 40.000 0.00 0.00 36.10 3.18
5170 5857 5.086621 ACTTAGGGGCAGAAATGAAATTGT 58.913 37.500 0.00 0.00 36.10 2.71
5171 5858 5.665916 ACTTAGGGGCAGAAATGAAATTG 57.334 39.130 0.00 0.00 36.10 2.32
5172 5859 6.731467 TCTACTTAGGGGCAGAAATGAAATT 58.269 36.000 0.00 0.00 38.98 1.82
5173 5860 6.327386 TCTACTTAGGGGCAGAAATGAAAT 57.673 37.500 0.00 0.00 0.00 2.17
5174 5861 5.772393 TCTACTTAGGGGCAGAAATGAAA 57.228 39.130 0.00 0.00 0.00 2.69
5175 5862 5.497474 GTTCTACTTAGGGGCAGAAATGAA 58.503 41.667 0.00 0.00 0.00 2.57
5176 5863 4.080526 GGTTCTACTTAGGGGCAGAAATGA 60.081 45.833 0.00 0.00 0.00 2.57
5177 5864 4.080299 AGGTTCTACTTAGGGGCAGAAATG 60.080 45.833 0.00 0.00 0.00 2.32
5178 5865 4.112331 AGGTTCTACTTAGGGGCAGAAAT 58.888 43.478 0.00 0.00 0.00 2.17
5179 5866 3.527937 AGGTTCTACTTAGGGGCAGAAA 58.472 45.455 0.00 0.00 0.00 2.52
5180 5867 3.200958 AGGTTCTACTTAGGGGCAGAA 57.799 47.619 0.00 0.00 0.00 3.02
5181 5868 2.942604 AGGTTCTACTTAGGGGCAGA 57.057 50.000 0.00 0.00 0.00 4.26
5182 5869 3.644335 AGTAGGTTCTACTTAGGGGCAG 58.356 50.000 2.07 0.00 0.00 4.85
5183 5870 3.771071 AGTAGGTTCTACTTAGGGGCA 57.229 47.619 2.07 0.00 0.00 5.36
5184 5871 4.802307 AGTAGTAGGTTCTACTTAGGGGC 58.198 47.826 12.11 0.00 45.43 5.80
5185 5872 6.011122 TGAGTAGTAGGTTCTACTTAGGGG 57.989 45.833 12.11 0.00 46.95 4.79
5186 5873 7.951347 TTTGAGTAGTAGGTTCTACTTAGGG 57.049 40.000 12.11 0.00 46.95 3.53
5189 5876 9.649167 GCAAATTTGAGTAGTAGGTTCTACTTA 57.351 33.333 22.31 1.95 46.95 2.24
5190 5877 8.376270 AGCAAATTTGAGTAGTAGGTTCTACTT 58.624 33.333 22.31 0.00 46.95 2.24
5192 5879 7.278203 GGAGCAAATTTGAGTAGTAGGTTCTAC 59.722 40.741 22.31 1.77 40.14 2.59
5193 5880 7.180408 AGGAGCAAATTTGAGTAGTAGGTTCTA 59.820 37.037 22.31 0.00 0.00 2.10
5194 5881 6.013293 AGGAGCAAATTTGAGTAGTAGGTTCT 60.013 38.462 22.31 4.44 0.00 3.01
5195 5882 6.174049 AGGAGCAAATTTGAGTAGTAGGTTC 58.826 40.000 22.31 0.00 0.00 3.62
5196 5883 6.013293 AGAGGAGCAAATTTGAGTAGTAGGTT 60.013 38.462 22.31 0.00 0.00 3.50
5197 5884 5.485708 AGAGGAGCAAATTTGAGTAGTAGGT 59.514 40.000 22.31 0.00 0.00 3.08
5198 5885 5.814705 CAGAGGAGCAAATTTGAGTAGTAGG 59.185 44.000 22.31 0.88 0.00 3.18
5199 5886 5.293079 GCAGAGGAGCAAATTTGAGTAGTAG 59.707 44.000 22.31 7.18 0.00 2.57
5200 5887 5.178797 GCAGAGGAGCAAATTTGAGTAGTA 58.821 41.667 22.31 0.00 0.00 1.82
5201 5888 4.006319 GCAGAGGAGCAAATTTGAGTAGT 58.994 43.478 22.31 1.46 0.00 2.73
5202 5889 3.376546 GGCAGAGGAGCAAATTTGAGTAG 59.623 47.826 22.31 5.39 35.83 2.57
5203 5890 3.347216 GGCAGAGGAGCAAATTTGAGTA 58.653 45.455 22.31 0.00 35.83 2.59
5204 5891 2.165998 GGCAGAGGAGCAAATTTGAGT 58.834 47.619 22.31 7.76 35.83 3.41
5205 5892 1.131883 CGGCAGAGGAGCAAATTTGAG 59.868 52.381 22.31 0.00 35.83 3.02
5206 5893 1.167851 CGGCAGAGGAGCAAATTTGA 58.832 50.000 22.31 0.00 35.83 2.69
5207 5894 0.457337 GCGGCAGAGGAGCAAATTTG 60.457 55.000 14.03 14.03 35.83 2.32
5208 5895 0.610232 AGCGGCAGAGGAGCAAATTT 60.610 50.000 1.45 0.00 35.83 1.82
5209 5896 0.253044 TAGCGGCAGAGGAGCAAATT 59.747 50.000 1.45 0.00 35.83 1.82
5210 5897 0.179062 CTAGCGGCAGAGGAGCAAAT 60.179 55.000 1.45 0.00 35.83 2.32
5211 5898 1.219124 CTAGCGGCAGAGGAGCAAA 59.781 57.895 1.45 0.00 35.83 3.68
5212 5899 1.544825 AACTAGCGGCAGAGGAGCAA 61.545 55.000 1.45 0.00 35.83 3.91
5213 5900 1.984570 AACTAGCGGCAGAGGAGCA 60.985 57.895 1.45 0.00 35.83 4.26
5214 5901 1.520342 CAACTAGCGGCAGAGGAGC 60.520 63.158 1.45 0.00 0.00 4.70
5215 5902 1.520342 GCAACTAGCGGCAGAGGAG 60.520 63.158 1.45 0.00 0.00 3.69
5216 5903 2.579201 GCAACTAGCGGCAGAGGA 59.421 61.111 1.45 0.00 0.00 3.71
5225 5912 6.292150 AGACATTTCTATAAGGGCAACTAGC 58.708 40.000 0.00 0.00 44.65 3.42
5226 5913 8.738645 AAAGACATTTCTATAAGGGCAACTAG 57.261 34.615 0.00 0.00 0.00 2.57
5227 5914 8.732746 GAAAGACATTTCTATAAGGGCAACTA 57.267 34.615 0.00 0.00 41.41 2.24
5228 5915 7.631717 GAAAGACATTTCTATAAGGGCAACT 57.368 36.000 0.00 0.00 41.41 3.16
5241 5928 4.909880 GGTAACAACGCAGAAAGACATTTC 59.090 41.667 0.00 0.00 44.37 2.17
5242 5929 4.553938 CGGTAACAACGCAGAAAGACATTT 60.554 41.667 0.00 0.00 0.00 2.32
5243 5930 3.059188 CGGTAACAACGCAGAAAGACATT 60.059 43.478 0.00 0.00 0.00 2.71
5244 5931 2.478894 CGGTAACAACGCAGAAAGACAT 59.521 45.455 0.00 0.00 0.00 3.06
5245 5932 1.862201 CGGTAACAACGCAGAAAGACA 59.138 47.619 0.00 0.00 0.00 3.41
5246 5933 2.572173 CGGTAACAACGCAGAAAGAC 57.428 50.000 0.00 0.00 0.00 3.01
5263 5950 1.730451 AAAGTTGTTTGACCGGGCGG 61.730 55.000 6.32 0.00 42.03 6.13
5264 5951 0.593773 CAAAGTTGTTTGACCGGGCG 60.594 55.000 6.32 0.00 45.22 6.13
5265 5952 0.741915 TCAAAGTTGTTTGACCGGGC 59.258 50.000 6.32 1.57 45.82 6.13
5316 6003 6.578023 TCGATCCCACAAAATTTCAGTTTTT 58.422 32.000 0.00 0.00 0.00 1.94
5317 6004 6.155475 TCGATCCCACAAAATTTCAGTTTT 57.845 33.333 0.00 0.00 0.00 2.43
5318 6005 5.782893 TCGATCCCACAAAATTTCAGTTT 57.217 34.783 0.00 0.00 0.00 2.66
5319 6006 5.278957 CCTTCGATCCCACAAAATTTCAGTT 60.279 40.000 0.00 0.00 0.00 3.16
5320 6007 4.218417 CCTTCGATCCCACAAAATTTCAGT 59.782 41.667 0.00 0.00 0.00 3.41
5321 6008 4.218417 ACCTTCGATCCCACAAAATTTCAG 59.782 41.667 0.00 0.00 0.00 3.02
5322 6009 4.148838 ACCTTCGATCCCACAAAATTTCA 58.851 39.130 0.00 0.00 0.00 2.69
5323 6010 4.783764 ACCTTCGATCCCACAAAATTTC 57.216 40.909 0.00 0.00 0.00 2.17
5324 6011 5.321927 AGTACCTTCGATCCCACAAAATTT 58.678 37.500 0.00 0.00 0.00 1.82
5325 6012 4.918588 AGTACCTTCGATCCCACAAAATT 58.081 39.130 0.00 0.00 0.00 1.82
5326 6013 4.019681 TGAGTACCTTCGATCCCACAAAAT 60.020 41.667 0.00 0.00 0.00 1.82
5327 6014 3.325425 TGAGTACCTTCGATCCCACAAAA 59.675 43.478 0.00 0.00 0.00 2.44
5328 6015 2.901192 TGAGTACCTTCGATCCCACAAA 59.099 45.455 0.00 0.00 0.00 2.83
5329 6016 2.496070 CTGAGTACCTTCGATCCCACAA 59.504 50.000 0.00 0.00 0.00 3.33
5330 6017 2.100197 CTGAGTACCTTCGATCCCACA 58.900 52.381 0.00 0.00 0.00 4.17
5331 6018 1.409427 CCTGAGTACCTTCGATCCCAC 59.591 57.143 0.00 0.00 0.00 4.61
5332 6019 1.006758 ACCTGAGTACCTTCGATCCCA 59.993 52.381 0.00 0.00 0.00 4.37
5333 6020 1.777941 ACCTGAGTACCTTCGATCCC 58.222 55.000 0.00 0.00 0.00 3.85
5334 6021 3.522553 CAAACCTGAGTACCTTCGATCC 58.477 50.000 0.00 0.00 0.00 3.36
5335 6022 2.930682 GCAAACCTGAGTACCTTCGATC 59.069 50.000 0.00 0.00 0.00 3.69
5336 6023 2.301870 TGCAAACCTGAGTACCTTCGAT 59.698 45.455 0.00 0.00 0.00 3.59
5337 6024 1.689813 TGCAAACCTGAGTACCTTCGA 59.310 47.619 0.00 0.00 0.00 3.71
5338 6025 2.163818 TGCAAACCTGAGTACCTTCG 57.836 50.000 0.00 0.00 0.00 3.79
5339 6026 2.814336 CCTTGCAAACCTGAGTACCTTC 59.186 50.000 0.00 0.00 0.00 3.46
5340 6027 2.174854 ACCTTGCAAACCTGAGTACCTT 59.825 45.455 0.00 0.00 0.00 3.50
5341 6028 1.774856 ACCTTGCAAACCTGAGTACCT 59.225 47.619 0.00 0.00 0.00 3.08
5342 6029 1.880027 CACCTTGCAAACCTGAGTACC 59.120 52.381 0.00 0.00 0.00 3.34
5343 6030 1.266989 GCACCTTGCAAACCTGAGTAC 59.733 52.381 0.00 0.00 44.26 2.73
5344 6031 1.604604 GCACCTTGCAAACCTGAGTA 58.395 50.000 0.00 0.00 44.26 2.59
5345 6032 2.419057 GCACCTTGCAAACCTGAGT 58.581 52.632 0.00 0.00 44.26 3.41
5355 6042 1.528161 GAAAACTTGCATGCACCTTGC 59.472 47.619 22.58 8.82 45.29 4.01
5356 6043 2.823984 TGAAAACTTGCATGCACCTTG 58.176 42.857 22.58 13.26 0.00 3.61
5357 6044 3.395639 CATGAAAACTTGCATGCACCTT 58.604 40.909 22.58 11.64 35.93 3.50
5358 6045 3.034721 CATGAAAACTTGCATGCACCT 57.965 42.857 22.58 4.99 35.93 4.00
5363 6050 3.120616 CGAACAGCATGAAAACTTGCATG 59.879 43.478 6.10 6.10 43.56 4.06
5364 6051 3.311106 CGAACAGCATGAAAACTTGCAT 58.689 40.909 0.00 0.00 39.69 3.96
5365 6052 2.543445 CCGAACAGCATGAAAACTTGCA 60.543 45.455 0.00 0.00 39.69 4.08
5366 6053 2.053627 CCGAACAGCATGAAAACTTGC 58.946 47.619 0.00 0.00 39.69 4.01
5367 6054 2.664916 CCCGAACAGCATGAAAACTTG 58.335 47.619 0.00 0.00 39.69 3.16
5368 6055 1.000274 GCCCGAACAGCATGAAAACTT 60.000 47.619 0.00 0.00 39.69 2.66
5369 6056 0.598065 GCCCGAACAGCATGAAAACT 59.402 50.000 0.00 0.00 39.69 2.66
5370 6057 0.313672 TGCCCGAACAGCATGAAAAC 59.686 50.000 0.00 0.00 39.69 2.43
5371 6058 2.725811 TGCCCGAACAGCATGAAAA 58.274 47.368 0.00 0.00 39.69 2.29
5372 6059 4.490696 TGCCCGAACAGCATGAAA 57.509 50.000 0.00 0.00 39.69 2.69
5377 6064 1.675310 CTGGAATGCCCGAACAGCA 60.675 57.895 0.00 0.00 45.94 4.41
5378 6065 2.409870 CCTGGAATGCCCGAACAGC 61.410 63.158 0.00 0.00 37.93 4.40
5379 6066 0.745845 CTCCTGGAATGCCCGAACAG 60.746 60.000 0.00 0.00 37.93 3.16
5380 6067 1.299648 CTCCTGGAATGCCCGAACA 59.700 57.895 0.00 0.00 37.93 3.18
5381 6068 2.115291 GCTCCTGGAATGCCCGAAC 61.115 63.158 0.00 0.00 37.93 3.95
5382 6069 2.257409 GAGCTCCTGGAATGCCCGAA 62.257 60.000 0.87 0.00 37.93 4.30
5383 6070 2.688666 AGCTCCTGGAATGCCCGA 60.689 61.111 4.46 0.00 37.93 5.14
5384 6071 2.203126 GAGCTCCTGGAATGCCCG 60.203 66.667 0.87 0.00 37.93 6.13
5385 6072 1.686325 TACGAGCTCCTGGAATGCCC 61.686 60.000 8.47 0.00 0.00 5.36
5386 6073 0.249657 CTACGAGCTCCTGGAATGCC 60.250 60.000 8.47 0.00 0.00 4.40
5387 6074 0.878086 GCTACGAGCTCCTGGAATGC 60.878 60.000 8.47 0.00 38.45 3.56
5388 6075 0.249657 GGCTACGAGCTCCTGGAATG 60.250 60.000 8.47 0.00 41.99 2.67
5389 6076 0.687757 TGGCTACGAGCTCCTGGAAT 60.688 55.000 8.47 0.00 41.99 3.01
5390 6077 0.902984 TTGGCTACGAGCTCCTGGAA 60.903 55.000 8.47 0.00 41.99 3.53
5391 6078 1.304962 TTGGCTACGAGCTCCTGGA 60.305 57.895 8.47 0.00 41.99 3.86
5392 6079 1.142748 CTTGGCTACGAGCTCCTGG 59.857 63.158 8.47 0.00 41.99 4.45
5393 6080 1.142748 CCTTGGCTACGAGCTCCTG 59.857 63.158 8.47 0.00 41.99 3.86
5394 6081 0.614979 TTCCTTGGCTACGAGCTCCT 60.615 55.000 8.47 0.00 41.99 3.69
5395 6082 0.249398 TTTCCTTGGCTACGAGCTCC 59.751 55.000 8.47 0.00 41.99 4.70
5396 6083 2.094762 TTTTCCTTGGCTACGAGCTC 57.905 50.000 2.73 2.73 41.99 4.09
5397 6084 2.152016 GTTTTTCCTTGGCTACGAGCT 58.848 47.619 6.78 0.00 41.99 4.09
5398 6085 1.877443 TGTTTTTCCTTGGCTACGAGC 59.123 47.619 0.00 0.00 41.46 5.03
5399 6086 3.139077 ACTGTTTTTCCTTGGCTACGAG 58.861 45.455 0.00 0.00 0.00 4.18
5400 6087 3.202829 ACTGTTTTTCCTTGGCTACGA 57.797 42.857 0.00 0.00 0.00 3.43
5401 6088 5.427036 TTTACTGTTTTTCCTTGGCTACG 57.573 39.130 0.00 0.00 0.00 3.51
5402 6089 8.520351 ACATATTTACTGTTTTTCCTTGGCTAC 58.480 33.333 0.00 0.00 0.00 3.58
5403 6090 8.644374 ACATATTTACTGTTTTTCCTTGGCTA 57.356 30.769 0.00 0.00 0.00 3.93
5404 6091 7.539034 ACATATTTACTGTTTTTCCTTGGCT 57.461 32.000 0.00 0.00 0.00 4.75
5405 6092 9.301153 CATACATATTTACTGTTTTTCCTTGGC 57.699 33.333 0.00 0.00 0.00 4.52
5406 6093 9.301153 GCATACATATTTACTGTTTTTCCTTGG 57.699 33.333 0.00 0.00 0.00 3.61
5407 6094 9.301153 GGCATACATATTTACTGTTTTTCCTTG 57.699 33.333 0.00 0.00 0.00 3.61
5408 6095 9.255029 AGGCATACATATTTACTGTTTTTCCTT 57.745 29.630 0.00 0.00 0.00 3.36
5409 6096 8.686334 CAGGCATACATATTTACTGTTTTTCCT 58.314 33.333 0.00 0.00 0.00 3.36
5410 6097 8.466798 ACAGGCATACATATTTACTGTTTTTCC 58.533 33.333 0.00 0.00 34.36 3.13
5411 6098 9.289303 CACAGGCATACATATTTACTGTTTTTC 57.711 33.333 0.00 0.00 35.72 2.29
5412 6099 9.019656 TCACAGGCATACATATTTACTGTTTTT 57.980 29.630 0.00 0.00 35.72 1.94
5413 6100 8.574251 TCACAGGCATACATATTTACTGTTTT 57.426 30.769 0.00 0.00 35.72 2.43
5414 6101 8.458843 GTTCACAGGCATACATATTTACTGTTT 58.541 33.333 0.00 0.00 35.72 2.83
5415 6102 7.829211 AGTTCACAGGCATACATATTTACTGTT 59.171 33.333 0.00 0.00 35.72 3.16
5416 6103 7.338710 AGTTCACAGGCATACATATTTACTGT 58.661 34.615 0.00 0.00 38.13 3.55
5417 6104 7.792374 AGTTCACAGGCATACATATTTACTG 57.208 36.000 0.00 0.00 0.00 2.74
5418 6105 8.705594 AGTAGTTCACAGGCATACATATTTACT 58.294 33.333 0.00 0.00 0.00 2.24
5419 6106 8.888579 AGTAGTTCACAGGCATACATATTTAC 57.111 34.615 0.00 0.00 0.00 2.01
5420 6107 9.542462 GAAGTAGTTCACAGGCATACATATTTA 57.458 33.333 5.38 0.00 32.36 1.40
5421 6108 8.046708 TGAAGTAGTTCACAGGCATACATATTT 58.953 33.333 8.98 0.00 37.79 1.40
5422 6109 7.564793 TGAAGTAGTTCACAGGCATACATATT 58.435 34.615 8.98 0.00 37.79 1.28
5423 6110 7.124573 TGAAGTAGTTCACAGGCATACATAT 57.875 36.000 8.98 0.00 37.79 1.78
5424 6111 6.538945 TGAAGTAGTTCACAGGCATACATA 57.461 37.500 8.98 0.00 37.79 2.29
5425 6112 5.420725 TGAAGTAGTTCACAGGCATACAT 57.579 39.130 8.98 0.00 37.79 2.29
5426 6113 4.882842 TGAAGTAGTTCACAGGCATACA 57.117 40.909 8.98 0.00 37.79 2.29
5427 6114 6.554334 TTTTGAAGTAGTTCACAGGCATAC 57.446 37.500 12.62 0.00 42.60 2.39
5468 6155 9.517868 TGGATGCCTGAAAATTTTCATATTTTT 57.482 25.926 28.86 14.70 45.26 1.94
5469 6156 9.517868 TTGGATGCCTGAAAATTTTCATATTTT 57.482 25.926 28.86 15.58 45.26 1.82
5470 6157 9.169592 CTTGGATGCCTGAAAATTTTCATATTT 57.830 29.630 28.86 16.76 45.26 1.40
5471 6158 8.542080 TCTTGGATGCCTGAAAATTTTCATATT 58.458 29.630 28.86 16.46 45.26 1.28
5472 6159 8.081517 TCTTGGATGCCTGAAAATTTTCATAT 57.918 30.769 28.86 22.64 45.26 1.78
5473 6160 7.479352 TCTTGGATGCCTGAAAATTTTCATA 57.521 32.000 28.86 19.73 45.26 2.15
5474 6161 6.363167 TCTTGGATGCCTGAAAATTTTCAT 57.637 33.333 28.86 17.13 45.26 2.57
5475 6162 5.804944 TCTTGGATGCCTGAAAATTTTCA 57.195 34.783 27.39 27.39 44.31 2.69
5476 6163 5.064325 GCATCTTGGATGCCTGAAAATTTTC 59.936 40.000 21.60 21.60 39.01 2.29
5477 6164 4.939439 GCATCTTGGATGCCTGAAAATTTT 59.061 37.500 18.37 2.28 39.01 1.82
5478 6165 4.224370 AGCATCTTGGATGCCTGAAAATTT 59.776 37.500 23.37 4.60 45.59 1.82
5479 6166 3.773119 AGCATCTTGGATGCCTGAAAATT 59.227 39.130 23.37 5.20 45.59 1.82
5480 6167 3.371965 AGCATCTTGGATGCCTGAAAAT 58.628 40.909 23.37 5.82 45.59 1.82
5481 6168 2.756760 GAGCATCTTGGATGCCTGAAAA 59.243 45.455 23.37 0.00 45.59 2.29
5482 6169 2.291089 TGAGCATCTTGGATGCCTGAAA 60.291 45.455 23.37 7.26 45.59 2.69
5483 6170 1.282738 TGAGCATCTTGGATGCCTGAA 59.717 47.619 23.37 8.69 45.59 3.02
5484 6171 0.913924 TGAGCATCTTGGATGCCTGA 59.086 50.000 23.37 9.36 45.59 3.86
5485 6172 1.022735 GTGAGCATCTTGGATGCCTG 58.977 55.000 23.37 0.00 45.59 4.85
5486 6173 0.463295 CGTGAGCATCTTGGATGCCT 60.463 55.000 23.37 13.80 45.59 4.75
5487 6174 0.745845 ACGTGAGCATCTTGGATGCC 60.746 55.000 23.37 16.82 45.59 4.40
5488 6175 0.376152 CACGTGAGCATCTTGGATGC 59.624 55.000 20.66 20.66 44.85 3.91
5489 6176 0.376152 GCACGTGAGCATCTTGGATG 59.624 55.000 22.23 3.44 34.92 3.51
5490 6177 1.086067 CGCACGTGAGCATCTTGGAT 61.086 55.000 22.23 0.00 34.92 3.41
5491 6178 1.737735 CGCACGTGAGCATCTTGGA 60.738 57.895 22.23 0.00 34.92 3.53
5492 6179 0.735978 TACGCACGTGAGCATCTTGG 60.736 55.000 22.23 0.00 34.92 3.61
5493 6180 1.059692 CTTACGCACGTGAGCATCTTG 59.940 52.381 22.23 0.40 34.92 3.02
5494 6181 1.350193 CTTACGCACGTGAGCATCTT 58.650 50.000 22.23 1.68 34.92 2.40
5495 6182 0.458543 CCTTACGCACGTGAGCATCT 60.459 55.000 22.23 2.10 34.92 2.90
5496 6183 0.736325 ACCTTACGCACGTGAGCATC 60.736 55.000 22.23 0.00 31.41 3.91
5497 6184 0.736325 GACCTTACGCACGTGAGCAT 60.736 55.000 22.23 3.35 31.41 3.79
5498 6185 1.372499 GACCTTACGCACGTGAGCA 60.372 57.895 22.23 3.18 31.41 4.26
5499 6186 1.080705 AGACCTTACGCACGTGAGC 60.081 57.895 22.23 3.21 31.41 4.26
5500 6187 0.039437 ACAGACCTTACGCACGTGAG 60.039 55.000 22.23 20.09 0.00 3.51
5501 6188 0.318360 CACAGACCTTACGCACGTGA 60.318 55.000 22.23 0.00 0.00 4.35
5502 6189 0.596600 ACACAGACCTTACGCACGTG 60.597 55.000 12.28 12.28 0.00 4.49
5503 6190 0.953727 TACACAGACCTTACGCACGT 59.046 50.000 0.00 0.00 0.00 4.49
5504 6191 2.054687 TTACACAGACCTTACGCACG 57.945 50.000 0.00 0.00 0.00 5.34
5505 6192 5.352643 AATTTTACACAGACCTTACGCAC 57.647 39.130 0.00 0.00 0.00 5.34
5506 6193 6.183360 ACAAAATTTTACACAGACCTTACGCA 60.183 34.615 2.44 0.00 0.00 5.24
5507 6194 6.203647 ACAAAATTTTACACAGACCTTACGC 58.796 36.000 2.44 0.00 0.00 4.42
5508 6195 7.698970 ACAACAAAATTTTACACAGACCTTACG 59.301 33.333 2.44 0.00 0.00 3.18
5509 6196 8.803799 CACAACAAAATTTTACACAGACCTTAC 58.196 33.333 2.44 0.00 0.00 2.34
5510 6197 8.524487 ACACAACAAAATTTTACACAGACCTTA 58.476 29.630 2.44 0.00 0.00 2.69
5511 6198 7.382898 ACACAACAAAATTTTACACAGACCTT 58.617 30.769 2.44 0.00 0.00 3.50
5512 6199 6.930731 ACACAACAAAATTTTACACAGACCT 58.069 32.000 2.44 0.00 0.00 3.85
5513 6200 7.589574 AACACAACAAAATTTTACACAGACC 57.410 32.000 2.44 0.00 0.00 3.85
5514 6201 7.954786 CCAAACACAACAAAATTTTACACAGAC 59.045 33.333 2.44 0.00 0.00 3.51
5515 6202 7.872993 TCCAAACACAACAAAATTTTACACAGA 59.127 29.630 2.44 0.00 0.00 3.41
5516 6203 7.954786 GTCCAAACACAACAAAATTTTACACAG 59.045 33.333 2.44 0.00 0.00 3.66
5517 6204 7.441157 TGTCCAAACACAACAAAATTTTACACA 59.559 29.630 2.44 0.00 0.00 3.72
5518 6205 7.797819 TGTCCAAACACAACAAAATTTTACAC 58.202 30.769 2.44 0.00 0.00 2.90
5519 6206 7.962964 TGTCCAAACACAACAAAATTTTACA 57.037 28.000 2.44 0.00 0.00 2.41
5520 6207 9.271738 CAATGTCCAAACACAACAAAATTTTAC 57.728 29.630 2.44 0.00 38.48 2.01
5521 6208 9.003658 ACAATGTCCAAACACAACAAAATTTTA 57.996 25.926 2.44 0.00 38.48 1.52
5522 6209 7.880105 ACAATGTCCAAACACAACAAAATTTT 58.120 26.923 0.00 0.00 38.48 1.82
5523 6210 7.446001 ACAATGTCCAAACACAACAAAATTT 57.554 28.000 0.00 0.00 38.48 1.82
5524 6211 8.037758 TCTACAATGTCCAAACACAACAAAATT 58.962 29.630 0.00 0.00 38.48 1.82
5525 6212 7.551585 TCTACAATGTCCAAACACAACAAAAT 58.448 30.769 0.00 0.00 38.48 1.82
5526 6213 6.925211 TCTACAATGTCCAAACACAACAAAA 58.075 32.000 0.00 0.00 38.48 2.44
5527 6214 6.516739 TCTACAATGTCCAAACACAACAAA 57.483 33.333 0.00 0.00 38.48 2.83
5528 6215 6.516739 TTCTACAATGTCCAAACACAACAA 57.483 33.333 0.00 0.00 38.48 2.83
5529 6216 5.449862 GCTTCTACAATGTCCAAACACAACA 60.450 40.000 0.00 0.00 38.48 3.33
5530 6217 4.976116 GCTTCTACAATGTCCAAACACAAC 59.024 41.667 0.00 0.00 38.48 3.32
5531 6218 4.887071 AGCTTCTACAATGTCCAAACACAA 59.113 37.500 0.00 0.00 38.48 3.33
5532 6219 4.460263 AGCTTCTACAATGTCCAAACACA 58.540 39.130 0.00 0.00 38.48 3.72
5533 6220 5.035784 GAGCTTCTACAATGTCCAAACAC 57.964 43.478 0.00 0.00 38.48 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.