Multiple sequence alignment - TraesCS6B01G210000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G210000 chr6B 100.000 4374 0 0 1 4374 276748591 276744218 0.000000e+00 8078.0
1 TraesCS6B01G210000 chr6B 93.893 131 8 0 3444 3574 220575435 220575565 9.600000e-47 198.0
2 TraesCS6B01G210000 chr6B 94.488 127 7 0 3445 3571 353299635 353299509 3.450000e-46 196.0
3 TraesCS6B01G210000 chr6B 93.182 132 9 0 3443 3574 91366387 91366518 1.240000e-45 195.0
4 TraesCS6B01G210000 chr6B 90.345 145 13 1 3445 3588 319513680 319513824 5.770000e-44 189.0
5 TraesCS6B01G210000 chr6A 95.753 2072 56 11 1394 3446 189920711 189922769 0.000000e+00 3310.0
6 TraesCS6B01G210000 chr6A 91.012 1146 75 11 264 1386 189919088 189920228 0.000000e+00 1520.0
7 TraesCS6B01G210000 chr6A 83.787 734 59 20 3610 4322 189922842 189923536 3.690000e-180 641.0
8 TraesCS6B01G210000 chr6D 94.607 2151 57 20 1311 3448 152270922 152268818 0.000000e+00 3275.0
9 TraesCS6B01G210000 chr6D 93.433 868 41 7 476 1338 152271858 152271002 0.000000e+00 1273.0
10 TraesCS6B01G210000 chr6D 90.691 333 30 1 3691 4022 152268691 152268359 4.010000e-120 442.0
11 TraesCS6B01G210000 chr6D 87.500 128 15 1 130 257 394836029 394836155 3.530000e-31 147.0
12 TraesCS6B01G210000 chr6D 95.294 85 3 1 4037 4120 152268372 152268288 2.740000e-27 134.0
13 TraesCS6B01G210000 chr4A 80.000 415 74 9 29 439 560962753 560963162 9.200000e-77 298.0
14 TraesCS6B01G210000 chr4A 94.488 127 7 0 3445 3571 735757900 735758026 3.450000e-46 196.0
15 TraesCS6B01G210000 chr4A 76.898 303 60 9 136 434 548303324 548303620 3.500000e-36 163.0
16 TraesCS6B01G210000 chr4D 79.695 394 73 6 25 414 469197459 469197069 1.200000e-70 278.0
17 TraesCS6B01G210000 chr4D 83.065 124 19 2 25 147 9436856 9436978 1.290000e-20 111.0
18 TraesCS6B01G210000 chr4D 81.897 116 20 1 139 254 399419190 399419076 3.600000e-16 97.1
19 TraesCS6B01G210000 chr4D 79.798 99 15 5 222 317 49939948 49940044 2.820000e-07 67.6
20 TraesCS6B01G210000 chr7D 77.586 464 96 8 2583 3042 593176888 593176429 1.550000e-69 274.0
21 TraesCS6B01G210000 chr7D 85.057 174 25 1 163 336 236834306 236834478 4.500000e-40 176.0
22 TraesCS6B01G210000 chr7B 77.538 463 98 6 2583 3042 667779546 667780005 1.550000e-69 274.0
23 TraesCS6B01G210000 chr7B 94.488 127 7 0 3445 3571 295083294 295083168 3.450000e-46 196.0
24 TraesCS6B01G210000 chr3B 78.215 381 72 9 29 405 54506675 54506302 2.630000e-57 233.0
25 TraesCS6B01G210000 chr1B 78.886 341 49 18 25 353 624813393 624813064 4.430000e-50 209.0
26 TraesCS6B01G210000 chr1B 80.435 276 50 4 25 298 161987650 161987923 1.590000e-49 207.0
27 TraesCS6B01G210000 chr5A 94.531 128 7 0 3445 3572 348073527 348073654 9.600000e-47 198.0
28 TraesCS6B01G210000 chr5A 77.429 319 59 9 126 432 600954467 600954150 1.250000e-40 178.0
29 TraesCS6B01G210000 chr5B 93.701 127 8 0 3445 3571 121673317 121673191 1.610000e-44 191.0
30 TraesCS6B01G210000 chr5B 78.912 294 49 5 25 306 709830653 709830945 2.080000e-43 187.0
31 TraesCS6B01G210000 chr2B 93.023 129 9 0 3443 3571 598960978 598960850 5.770000e-44 189.0
32 TraesCS6B01G210000 chr5D 75.785 446 67 21 25 435 425038621 425038182 2.080000e-43 187.0
33 TraesCS6B01G210000 chr7A 78.859 298 44 10 25 311 127672357 127672646 2.690000e-42 183.0
34 TraesCS6B01G210000 chr3D 77.143 350 44 20 25 353 61771841 61771507 2.090000e-38 171.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G210000 chr6B 276744218 276748591 4373 True 8078.000000 8078 100.00000 1 4374 1 chr6B.!!$R1 4373
1 TraesCS6B01G210000 chr6A 189919088 189923536 4448 False 1823.666667 3310 90.18400 264 4322 3 chr6A.!!$F1 4058
2 TraesCS6B01G210000 chr6D 152268288 152271858 3570 True 1281.000000 3275 93.50625 476 4120 4 chr6D.!!$R1 3644

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
138 139 0.038343 GGAGATCGCCAGATGAGAGC 60.038 60.0 11.06 0.0 37.19 4.09 F
1392 1520 0.041312 ATGCGTGTGTGAGCGTTTTC 60.041 50.0 0.00 0.0 35.87 2.29 F
1598 2210 2.029470 GCACTCTTGCTCACTAGTCACT 60.029 50.0 0.00 0.0 46.17 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2085 2697 1.064946 CGTCCTGATCGTCTCCAGC 59.935 63.158 0.0 0.0 0.0 4.85 R
2356 2970 0.249398 CCGGGGTCAGGTACTTCTTG 59.751 60.000 0.0 0.0 34.6 3.02 R
3446 4078 0.107654 GAATGTTGGGACGGAGGGAG 60.108 60.000 0.0 0.0 0.0 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 3.539842 GGGACGACCATCTCCTCC 58.460 66.667 6.20 0.00 39.85 4.30
45 46 1.075896 GGGACGACCATCTCCTCCT 60.076 63.158 6.20 0.00 39.85 3.69
46 47 1.110518 GGGACGACCATCTCCTCCTC 61.111 65.000 6.20 0.00 39.85 3.71
47 48 1.448922 GGACGACCATCTCCTCCTCG 61.449 65.000 0.00 0.00 35.97 4.63
48 49 1.448922 GACGACCATCTCCTCCTCGG 61.449 65.000 0.00 0.00 0.00 4.63
49 50 2.196925 CGACCATCTCCTCCTCGGG 61.197 68.421 0.00 0.00 0.00 5.14
50 51 1.834822 GACCATCTCCTCCTCGGGG 60.835 68.421 0.00 0.00 32.98 5.73
51 52 3.237741 CCATCTCCTCCTCGGGGC 61.238 72.222 0.00 0.00 31.12 5.80
52 53 3.237741 CATCTCCTCCTCGGGGCC 61.238 72.222 0.00 0.00 31.12 5.80
53 54 3.767268 ATCTCCTCCTCGGGGCCA 61.767 66.667 4.39 0.00 31.12 5.36
54 55 4.779733 TCTCCTCCTCGGGGCCAC 62.780 72.222 4.39 0.00 31.12 5.01
64 65 4.489771 GGGGCCACGTGGGATGAG 62.490 72.222 34.58 9.82 40.01 2.90
66 67 4.101448 GGCCACGTGGGATGAGCT 62.101 66.667 34.58 0.00 40.01 4.09
67 68 2.512515 GCCACGTGGGATGAGCTC 60.513 66.667 34.58 12.61 40.01 4.09
68 69 2.202797 CCACGTGGGATGAGCTCG 60.203 66.667 27.57 0.00 40.01 5.03
69 70 2.710902 CCACGTGGGATGAGCTCGA 61.711 63.158 27.57 0.00 40.01 4.04
70 71 1.226802 CACGTGGGATGAGCTCGAG 60.227 63.158 8.45 8.45 0.00 4.04
71 72 1.378646 ACGTGGGATGAGCTCGAGA 60.379 57.895 18.75 0.00 0.00 4.04
72 73 0.753479 ACGTGGGATGAGCTCGAGAT 60.753 55.000 18.75 10.84 0.00 2.75
73 74 0.039617 CGTGGGATGAGCTCGAGATC 60.040 60.000 23.45 23.45 0.00 2.75
74 75 0.039617 GTGGGATGAGCTCGAGATCG 60.040 60.000 24.34 0.00 41.45 3.69
76 77 0.239879 GGGATGAGCTCGAGATCGAC 59.760 60.000 24.34 19.31 44.22 4.20
77 78 0.947960 GGATGAGCTCGAGATCGACA 59.052 55.000 24.34 9.54 44.22 4.35
78 79 1.069296 GGATGAGCTCGAGATCGACAG 60.069 57.143 24.34 0.00 44.22 3.51
79 80 1.601903 GATGAGCTCGAGATCGACAGT 59.398 52.381 24.34 8.82 44.22 3.55
80 81 1.454201 TGAGCTCGAGATCGACAGTT 58.546 50.000 24.34 0.00 44.22 3.16
81 82 1.398739 TGAGCTCGAGATCGACAGTTC 59.601 52.381 24.34 0.44 44.22 3.01
82 83 1.668751 GAGCTCGAGATCGACAGTTCT 59.331 52.381 18.75 0.00 44.22 3.01
83 84 1.400142 AGCTCGAGATCGACAGTTCTG 59.600 52.381 18.75 0.00 44.22 3.02
84 85 1.532921 GCTCGAGATCGACAGTTCTGG 60.533 57.143 18.75 0.00 44.22 3.86
85 86 2.010497 CTCGAGATCGACAGTTCTGGA 58.990 52.381 6.58 0.00 44.22 3.86
86 87 2.420372 CTCGAGATCGACAGTTCTGGAA 59.580 50.000 6.58 0.00 44.22 3.53
87 88 2.420372 TCGAGATCGACAGTTCTGGAAG 59.580 50.000 0.00 0.00 44.22 3.46
88 89 2.162608 CGAGATCGACAGTTCTGGAAGT 59.837 50.000 0.00 0.00 43.02 3.01
89 90 3.374367 CGAGATCGACAGTTCTGGAAGTA 59.626 47.826 0.00 0.00 43.02 2.24
90 91 4.035792 CGAGATCGACAGTTCTGGAAGTAT 59.964 45.833 0.00 0.00 43.02 2.12
91 92 5.236695 CGAGATCGACAGTTCTGGAAGTATA 59.763 44.000 0.00 0.00 43.02 1.47
92 93 6.565060 CGAGATCGACAGTTCTGGAAGTATAG 60.565 46.154 0.00 0.00 43.02 1.31
93 94 5.533154 AGATCGACAGTTCTGGAAGTATAGG 59.467 44.000 4.82 0.00 33.76 2.57
94 95 4.851843 TCGACAGTTCTGGAAGTATAGGA 58.148 43.478 4.82 0.00 33.76 2.94
95 96 4.639310 TCGACAGTTCTGGAAGTATAGGAC 59.361 45.833 4.82 0.00 33.76 3.85
96 97 4.641094 CGACAGTTCTGGAAGTATAGGACT 59.359 45.833 4.82 0.00 41.56 3.85
97 98 5.220892 CGACAGTTCTGGAAGTATAGGACTC 60.221 48.000 4.82 0.00 37.44 3.36
98 99 4.641094 ACAGTTCTGGAAGTATAGGACTCG 59.359 45.833 4.82 0.00 37.44 4.18
99 100 4.036971 CAGTTCTGGAAGTATAGGACTCGG 59.963 50.000 0.00 0.00 37.44 4.63
100 101 4.079901 AGTTCTGGAAGTATAGGACTCGGA 60.080 45.833 0.00 0.00 37.44 4.55
101 102 4.726035 TCTGGAAGTATAGGACTCGGAT 57.274 45.455 0.00 0.00 37.44 4.18
102 103 4.653868 TCTGGAAGTATAGGACTCGGATC 58.346 47.826 0.00 0.00 37.44 3.36
103 104 3.759618 CTGGAAGTATAGGACTCGGATCC 59.240 52.174 0.00 0.00 37.44 3.36
104 105 2.748532 GGAAGTATAGGACTCGGATCCG 59.251 54.545 28.62 28.62 44.22 4.18
105 106 1.823797 AGTATAGGACTCGGATCCGC 58.176 55.000 29.62 15.32 44.22 5.54
106 107 1.351683 AGTATAGGACTCGGATCCGCT 59.648 52.381 29.62 21.45 44.22 5.52
107 108 1.469308 GTATAGGACTCGGATCCGCTG 59.531 57.143 29.62 24.19 44.22 5.18
108 109 1.528292 ATAGGACTCGGATCCGCTGC 61.528 60.000 29.62 20.32 44.22 5.25
109 110 4.593864 GGACTCGGATCCGCTGCC 62.594 72.222 29.62 23.23 39.59 4.85
110 111 4.593864 GACTCGGATCCGCTGCCC 62.594 72.222 29.62 14.74 39.59 5.36
115 116 4.241555 GGATCCGCTGCCCGTCAT 62.242 66.667 0.00 0.00 34.38 3.06
116 117 2.969238 GATCCGCTGCCCGTCATG 60.969 66.667 0.00 0.00 34.38 3.07
127 128 3.032609 CGTCATGCCGGAGATCGC 61.033 66.667 5.05 0.00 37.59 4.58
128 129 2.663188 GTCATGCCGGAGATCGCC 60.663 66.667 5.05 5.23 37.59 5.54
129 130 3.153781 TCATGCCGGAGATCGCCA 61.154 61.111 16.29 0.00 37.59 5.69
130 131 2.664185 CATGCCGGAGATCGCCAG 60.664 66.667 16.29 5.23 37.59 4.85
131 132 2.839632 ATGCCGGAGATCGCCAGA 60.840 61.111 16.29 0.00 37.59 3.86
132 133 2.212811 ATGCCGGAGATCGCCAGAT 61.213 57.895 16.29 0.90 40.38 2.90
133 134 2.356793 GCCGGAGATCGCCAGATG 60.357 66.667 16.29 1.94 37.19 2.90
134 135 2.861101 GCCGGAGATCGCCAGATGA 61.861 63.158 16.29 0.00 37.19 2.92
135 136 1.288439 CCGGAGATCGCCAGATGAG 59.712 63.158 16.29 0.00 37.19 2.90
136 137 1.175347 CCGGAGATCGCCAGATGAGA 61.175 60.000 16.29 0.00 37.19 3.27
137 138 0.240678 CGGAGATCGCCAGATGAGAG 59.759 60.000 16.29 0.00 37.19 3.20
138 139 0.038343 GGAGATCGCCAGATGAGAGC 60.038 60.000 11.06 0.00 37.19 4.09
139 140 0.961019 GAGATCGCCAGATGAGAGCT 59.039 55.000 0.00 0.00 37.19 4.09
140 141 1.340889 GAGATCGCCAGATGAGAGCTT 59.659 52.381 0.00 0.00 37.19 3.74
141 142 1.068895 AGATCGCCAGATGAGAGCTTG 59.931 52.381 0.00 0.00 37.19 4.01
142 143 0.106335 ATCGCCAGATGAGAGCTTGG 59.894 55.000 0.00 0.00 35.40 3.61
143 144 1.523258 CGCCAGATGAGAGCTTGGG 60.523 63.158 2.16 0.00 0.00 4.12
144 145 1.606531 GCCAGATGAGAGCTTGGGT 59.393 57.895 2.16 0.00 0.00 4.51
145 146 0.747283 GCCAGATGAGAGCTTGGGTG 60.747 60.000 2.16 0.00 0.00 4.61
146 147 0.107312 CCAGATGAGAGCTTGGGTGG 60.107 60.000 0.00 0.00 0.00 4.61
147 148 0.747283 CAGATGAGAGCTTGGGTGGC 60.747 60.000 0.00 0.00 0.00 5.01
148 149 1.203441 AGATGAGAGCTTGGGTGGCA 61.203 55.000 0.00 0.00 0.00 4.92
149 150 0.747283 GATGAGAGCTTGGGTGGCAG 60.747 60.000 0.00 0.00 0.00 4.85
150 151 1.203441 ATGAGAGCTTGGGTGGCAGA 61.203 55.000 0.00 0.00 0.00 4.26
151 152 1.376466 GAGAGCTTGGGTGGCAGAA 59.624 57.895 0.00 0.00 0.00 3.02
152 153 0.676151 GAGAGCTTGGGTGGCAGAAG 60.676 60.000 0.00 0.00 0.00 2.85
153 154 1.130054 AGAGCTTGGGTGGCAGAAGA 61.130 55.000 5.29 0.00 0.00 2.87
154 155 0.676151 GAGCTTGGGTGGCAGAAGAG 60.676 60.000 5.29 0.00 0.00 2.85
155 156 1.130054 AGCTTGGGTGGCAGAAGAGA 61.130 55.000 5.29 0.00 0.00 3.10
156 157 0.676151 GCTTGGGTGGCAGAAGAGAG 60.676 60.000 5.29 0.00 0.00 3.20
157 158 0.689623 CTTGGGTGGCAGAAGAGAGT 59.310 55.000 0.00 0.00 0.00 3.24
158 159 0.397941 TTGGGTGGCAGAAGAGAGTG 59.602 55.000 0.00 0.00 0.00 3.51
159 160 0.471780 TGGGTGGCAGAAGAGAGTGA 60.472 55.000 0.00 0.00 0.00 3.41
160 161 0.687354 GGGTGGCAGAAGAGAGTGAA 59.313 55.000 0.00 0.00 0.00 3.18
161 162 1.072331 GGGTGGCAGAAGAGAGTGAAA 59.928 52.381 0.00 0.00 0.00 2.69
162 163 2.290577 GGGTGGCAGAAGAGAGTGAAAT 60.291 50.000 0.00 0.00 0.00 2.17
163 164 2.746362 GGTGGCAGAAGAGAGTGAAATG 59.254 50.000 0.00 0.00 0.00 2.32
164 165 3.557898 GGTGGCAGAAGAGAGTGAAATGA 60.558 47.826 0.00 0.00 0.00 2.57
165 166 4.067896 GTGGCAGAAGAGAGTGAAATGAA 58.932 43.478 0.00 0.00 0.00 2.57
166 167 4.153835 GTGGCAGAAGAGAGTGAAATGAAG 59.846 45.833 0.00 0.00 0.00 3.02
167 168 4.202398 TGGCAGAAGAGAGTGAAATGAAGT 60.202 41.667 0.00 0.00 0.00 3.01
168 169 4.153835 GGCAGAAGAGAGTGAAATGAAGTG 59.846 45.833 0.00 0.00 0.00 3.16
169 170 4.153835 GCAGAAGAGAGTGAAATGAAGTGG 59.846 45.833 0.00 0.00 0.00 4.00
170 171 4.153835 CAGAAGAGAGTGAAATGAAGTGGC 59.846 45.833 0.00 0.00 0.00 5.01
171 172 4.041444 AGAAGAGAGTGAAATGAAGTGGCT 59.959 41.667 0.00 0.00 0.00 4.75
172 173 5.247110 AGAAGAGAGTGAAATGAAGTGGCTA 59.753 40.000 0.00 0.00 0.00 3.93
173 174 5.690464 AGAGAGTGAAATGAAGTGGCTAT 57.310 39.130 0.00 0.00 0.00 2.97
174 175 5.426504 AGAGAGTGAAATGAAGTGGCTATG 58.573 41.667 0.00 0.00 0.00 2.23
175 176 4.521146 AGAGTGAAATGAAGTGGCTATGG 58.479 43.478 0.00 0.00 0.00 2.74
176 177 4.018960 AGAGTGAAATGAAGTGGCTATGGT 60.019 41.667 0.00 0.00 0.00 3.55
177 178 4.666512 AGTGAAATGAAGTGGCTATGGTT 58.333 39.130 0.00 0.00 0.00 3.67
178 179 5.079643 AGTGAAATGAAGTGGCTATGGTTT 58.920 37.500 0.00 0.00 0.00 3.27
179 180 5.047802 AGTGAAATGAAGTGGCTATGGTTTG 60.048 40.000 0.00 0.00 0.00 2.93
180 181 5.048083 GTGAAATGAAGTGGCTATGGTTTGA 60.048 40.000 0.00 0.00 0.00 2.69
181 182 5.716228 TGAAATGAAGTGGCTATGGTTTGAT 59.284 36.000 0.00 0.00 0.00 2.57
182 183 5.841957 AATGAAGTGGCTATGGTTTGATC 57.158 39.130 0.00 0.00 0.00 2.92
183 184 3.620488 TGAAGTGGCTATGGTTTGATCC 58.380 45.455 0.00 0.00 0.00 3.36
184 185 2.332063 AGTGGCTATGGTTTGATCCG 57.668 50.000 0.00 0.00 0.00 4.18
185 186 1.559682 AGTGGCTATGGTTTGATCCGT 59.440 47.619 0.00 0.00 0.00 4.69
186 187 1.940613 GTGGCTATGGTTTGATCCGTC 59.059 52.381 0.00 0.00 0.00 4.79
187 188 1.217882 GGCTATGGTTTGATCCGTCG 58.782 55.000 0.00 0.00 0.00 5.12
188 189 1.202486 GGCTATGGTTTGATCCGTCGA 60.202 52.381 0.00 0.00 0.00 4.20
189 190 2.128035 GCTATGGTTTGATCCGTCGAG 58.872 52.381 0.00 0.00 0.00 4.04
190 191 2.128035 CTATGGTTTGATCCGTCGAGC 58.872 52.381 0.00 0.00 0.00 5.03
191 192 0.806102 ATGGTTTGATCCGTCGAGCG 60.806 55.000 0.00 0.00 40.95 5.03
200 201 2.278857 CGTCGAGCGGATGGGAAG 60.279 66.667 0.00 0.00 36.85 3.46
201 202 2.107141 GTCGAGCGGATGGGAAGG 59.893 66.667 0.00 0.00 0.00 3.46
202 203 2.043349 TCGAGCGGATGGGAAGGA 60.043 61.111 0.00 0.00 0.00 3.36
203 204 1.684391 TCGAGCGGATGGGAAGGAA 60.684 57.895 0.00 0.00 0.00 3.36
204 205 1.048724 TCGAGCGGATGGGAAGGAAT 61.049 55.000 0.00 0.00 0.00 3.01
205 206 0.679505 CGAGCGGATGGGAAGGAATA 59.320 55.000 0.00 0.00 0.00 1.75
206 207 1.276421 CGAGCGGATGGGAAGGAATAT 59.724 52.381 0.00 0.00 0.00 1.28
207 208 2.496070 CGAGCGGATGGGAAGGAATATA 59.504 50.000 0.00 0.00 0.00 0.86
208 209 3.133003 CGAGCGGATGGGAAGGAATATAT 59.867 47.826 0.00 0.00 0.00 0.86
209 210 4.446371 GAGCGGATGGGAAGGAATATATG 58.554 47.826 0.00 0.00 0.00 1.78
210 211 3.846588 AGCGGATGGGAAGGAATATATGT 59.153 43.478 0.00 0.00 0.00 2.29
211 212 3.941483 GCGGATGGGAAGGAATATATGTG 59.059 47.826 0.00 0.00 0.00 3.21
212 213 4.323485 GCGGATGGGAAGGAATATATGTGA 60.323 45.833 0.00 0.00 0.00 3.58
213 214 5.423015 CGGATGGGAAGGAATATATGTGAG 58.577 45.833 0.00 0.00 0.00 3.51
214 215 5.627735 CGGATGGGAAGGAATATATGTGAGG 60.628 48.000 0.00 0.00 0.00 3.86
215 216 5.251700 GGATGGGAAGGAATATATGTGAGGT 59.748 44.000 0.00 0.00 0.00 3.85
216 217 5.825593 TGGGAAGGAATATATGTGAGGTC 57.174 43.478 0.00 0.00 0.00 3.85
217 218 4.283467 TGGGAAGGAATATATGTGAGGTCG 59.717 45.833 0.00 0.00 0.00 4.79
218 219 4.527038 GGGAAGGAATATATGTGAGGTCGA 59.473 45.833 0.00 0.00 0.00 4.20
219 220 5.336849 GGGAAGGAATATATGTGAGGTCGAG 60.337 48.000 0.00 0.00 0.00 4.04
220 221 5.244178 GGAAGGAATATATGTGAGGTCGAGT 59.756 44.000 0.00 0.00 0.00 4.18
221 222 5.713792 AGGAATATATGTGAGGTCGAGTG 57.286 43.478 0.00 0.00 0.00 3.51
222 223 4.524714 AGGAATATATGTGAGGTCGAGTGG 59.475 45.833 0.00 0.00 0.00 4.00
223 224 4.322049 GGAATATATGTGAGGTCGAGTGGG 60.322 50.000 0.00 0.00 0.00 4.61
224 225 0.753262 ATATGTGAGGTCGAGTGGGC 59.247 55.000 0.00 0.00 0.00 5.36
225 226 1.327690 TATGTGAGGTCGAGTGGGCC 61.328 60.000 0.00 0.00 0.00 5.80
226 227 3.311110 GTGAGGTCGAGTGGGCCA 61.311 66.667 0.00 0.00 0.00 5.36
227 228 2.525629 TGAGGTCGAGTGGGCCAA 60.526 61.111 8.40 0.00 0.00 4.52
228 229 2.047179 GAGGTCGAGTGGGCCAAC 60.047 66.667 8.40 0.26 0.00 3.77
229 230 3.934391 GAGGTCGAGTGGGCCAACG 62.934 68.421 22.56 22.56 0.00 4.10
230 231 4.309950 GGTCGAGTGGGCCAACGT 62.310 66.667 25.62 8.84 0.00 3.99
231 232 3.041940 GTCGAGTGGGCCAACGTG 61.042 66.667 25.62 11.04 0.00 4.49
232 233 4.308458 TCGAGTGGGCCAACGTGG 62.308 66.667 25.62 10.00 41.55 4.94
253 254 4.736896 GGGTCTGACGTGGCGGAC 62.737 72.222 6.10 6.10 42.21 4.79
276 277 0.611062 TCCAGACGCCCCTATATCCG 60.611 60.000 0.00 0.00 0.00 4.18
279 280 1.888736 GACGCCCCTATATCCGTCC 59.111 63.158 0.00 0.00 42.91 4.79
280 281 0.611340 GACGCCCCTATATCCGTCCT 60.611 60.000 0.00 0.00 42.91 3.85
281 282 0.700564 ACGCCCCTATATCCGTCCTA 59.299 55.000 0.00 0.00 0.00 2.94
287 288 4.470304 GCCCCTATATCCGTCCTAGATTTT 59.530 45.833 0.00 0.00 0.00 1.82
290 291 5.420409 CCTATATCCGTCCTAGATTTTGGC 58.580 45.833 0.00 0.00 0.00 4.52
303 304 5.003096 AGATTTTGGCTGGATATTAGGGG 57.997 43.478 0.00 0.00 0.00 4.79
306 307 0.771127 TGGCTGGATATTAGGGGTGC 59.229 55.000 0.00 0.00 0.00 5.01
311 312 0.323957 GGATATTAGGGGTGCCGGTC 59.676 60.000 1.90 0.00 0.00 4.79
313 314 1.002087 GATATTAGGGGTGCCGGTCAG 59.998 57.143 1.90 0.00 0.00 3.51
332 333 1.449070 CCTCGGGCGTTTAAGGTCC 60.449 63.158 0.00 0.00 0.00 4.46
336 337 1.871077 GGGCGTTTAAGGTCCGTTG 59.129 57.895 0.00 0.00 0.00 4.10
337 338 0.603439 GGGCGTTTAAGGTCCGTTGA 60.603 55.000 0.00 0.00 0.00 3.18
338 339 0.794473 GGCGTTTAAGGTCCGTTGAG 59.206 55.000 0.00 0.00 0.00 3.02
340 341 0.794473 CGTTTAAGGTCCGTTGAGGC 59.206 55.000 0.00 0.00 40.77 4.70
341 342 0.794473 GTTTAAGGTCCGTTGAGGCG 59.206 55.000 0.00 0.00 40.77 5.52
342 343 0.952010 TTTAAGGTCCGTTGAGGCGC 60.952 55.000 0.00 0.00 40.77 6.53
345 346 4.373116 GGTCCGTTGAGGCGCTCA 62.373 66.667 7.64 6.39 38.87 4.26
350 352 2.169789 CGTTGAGGCGCTCATCTGG 61.170 63.158 7.64 0.00 40.39 3.86
355 357 3.512516 GGCGCTCATCTGGGTTGC 61.513 66.667 7.64 0.00 0.00 4.17
358 360 0.744414 GCGCTCATCTGGGTTGCTTA 60.744 55.000 0.00 0.00 0.00 3.09
362 364 3.876914 CGCTCATCTGGGTTGCTTATTTA 59.123 43.478 0.00 0.00 0.00 1.40
369 371 4.080807 TCTGGGTTGCTTATTTATGACCGA 60.081 41.667 0.00 0.00 0.00 4.69
376 378 7.255104 GGTTGCTTATTTATGACCGATCATTGA 60.255 37.037 0.00 0.00 43.40 2.57
383 385 2.367202 ACCGATCATTGACCGGGCT 61.367 57.895 23.16 0.19 46.83 5.19
384 386 1.889105 CCGATCATTGACCGGGCTG 60.889 63.158 11.93 0.00 39.59 4.85
387 389 0.815615 GATCATTGACCGGGCTGTCC 60.816 60.000 9.82 0.00 34.25 4.02
412 415 0.879090 GCGTTTGAGGTGGGTTTAGG 59.121 55.000 0.00 0.00 0.00 2.69
418 421 2.036731 GGTGGGTTTAGGGTGCCC 59.963 66.667 0.00 0.00 42.64 5.36
419 422 2.036731 GTGGGTTTAGGGTGCCCC 59.963 66.667 3.17 2.16 45.90 5.80
468 471 6.723977 AGCCCATTTATTTCAAACAGGACTTA 59.276 34.615 0.00 0.00 0.00 2.24
487 490 4.335874 ACTTAGCACTACCATGTAGACTCG 59.664 45.833 8.19 3.72 0.00 4.18
608 625 2.045634 GGCTACCCACCGGTTTCC 60.046 66.667 2.97 0.00 40.58 3.13
621 638 0.320508 GGTTTCCGTCGCCTTCTTCT 60.321 55.000 0.00 0.00 0.00 2.85
630 647 1.079750 GCCTTCTTCTTCCGCGAGT 60.080 57.895 8.23 0.00 0.00 4.18
714 731 4.059459 CACACGCACGTCCGAAGC 62.059 66.667 5.57 0.00 0.00 3.86
917 935 3.471620 GCCATGATAGAGGCCGGA 58.528 61.111 5.05 0.00 45.18 5.14
939 957 2.310233 CGTTGCTCACTGGACACGG 61.310 63.158 0.00 0.00 0.00 4.94
942 960 2.740055 GCTCACTGGACACGGCAG 60.740 66.667 0.00 0.00 0.00 4.85
943 961 2.737180 CTCACTGGACACGGCAGT 59.263 61.111 0.00 0.00 0.00 4.40
950 968 1.302511 GGACACGGCAGTTGATGGT 60.303 57.895 0.00 0.00 0.00 3.55
1022 1040 0.540830 AACGAGAGAGGCCAGTGAGT 60.541 55.000 5.01 0.00 0.00 3.41
1062 1085 2.029623 TCCTAGGCACGTATCAGTTCC 58.970 52.381 2.96 0.00 0.00 3.62
1091 1114 3.413846 TCCTCGAGGTATGCGTATAGT 57.586 47.619 30.17 0.00 36.34 2.12
1123 1146 6.234213 CACAACAGTCTCGATATTCGTTTTC 58.766 40.000 0.00 0.00 41.35 2.29
1127 1150 6.164176 ACAGTCTCGATATTCGTTTTCCTTT 58.836 36.000 0.00 0.00 41.35 3.11
1199 1222 7.843490 ACTCGCTCAGTTTATAATAAAAGCA 57.157 32.000 9.63 0.46 26.56 3.91
1321 1344 2.632377 ACCTTGAATAGATGCGTGTGG 58.368 47.619 0.00 0.00 0.00 4.17
1333 1461 0.099082 GCGTGTGGGAAACGTTTTCA 59.901 50.000 20.63 15.88 42.93 2.69
1392 1520 0.041312 ATGCGTGTGTGAGCGTTTTC 60.041 50.000 0.00 0.00 35.87 2.29
1403 2006 5.005971 GTGTGAGCGTTTTCAGTAGTGTTTA 59.994 40.000 0.00 0.00 0.00 2.01
1418 2021 4.822026 AGTGTTTATCAGTACCTCAGTGC 58.178 43.478 0.00 0.00 0.00 4.40
1545 2153 6.293353 GCATGGACATTTTTAGGTTTTTGTGG 60.293 38.462 0.00 0.00 0.00 4.17
1567 2179 5.994054 TGGTATGAATTGAGCTGATCTTAGC 59.006 40.000 0.00 0.00 44.01 3.09
1598 2210 2.029470 GCACTCTTGCTCACTAGTCACT 60.029 50.000 0.00 0.00 46.17 3.41
1740 2352 3.503748 CCATGGACAAGAAGAACTGGTTC 59.496 47.826 5.56 5.43 39.78 3.62
1833 2445 2.126071 GCTCTGTTCGCCAGCGTA 60.126 61.111 12.32 0.00 41.25 4.42
2356 2970 0.319297 ACTTCACTTACGACACGGCC 60.319 55.000 0.00 0.00 0.00 6.13
2485 3099 2.507324 GAGCTCGTCAAGACCCGC 60.507 66.667 0.00 0.00 0.00 6.13
2518 3132 3.117888 AGGTGAACACACAGAATTCCAGT 60.118 43.478 0.65 0.00 36.39 4.00
2525 3139 5.539048 ACACACAGAATTCCAGTACAGTAC 58.461 41.667 2.05 2.05 0.00 2.73
2527 3141 6.492429 ACACACAGAATTCCAGTACAGTACTA 59.508 38.462 13.12 0.00 37.23 1.82
2528 3142 6.807230 CACACAGAATTCCAGTACAGTACTAC 59.193 42.308 13.12 0.00 37.23 2.73
2529 3143 6.028368 CACAGAATTCCAGTACAGTACTACG 58.972 44.000 13.12 6.76 37.23 3.51
2531 3145 6.881065 ACAGAATTCCAGTACAGTACTACGTA 59.119 38.462 13.12 0.00 37.23 3.57
2991 3608 1.822613 CATCAAGCTCATGCCCGCT 60.823 57.895 0.00 0.00 40.80 5.52
3145 3774 1.980951 GCCATGAACGCGATGAAGCA 61.981 55.000 15.93 0.00 36.85 3.91
3146 3775 0.447406 CCATGAACGCGATGAAGCAA 59.553 50.000 15.93 0.00 36.85 3.91
3147 3776 1.530441 CCATGAACGCGATGAAGCAAG 60.530 52.381 15.93 0.00 36.85 4.01
3148 3777 0.729116 ATGAACGCGATGAAGCAAGG 59.271 50.000 15.93 0.00 36.85 3.61
3204 3834 6.312426 TGCGTGATTTGAAATTTTGAAGTGTT 59.688 30.769 0.00 0.00 0.00 3.32
3296 3926 3.674997 ACATGCTCCGTTTCAGTAATGT 58.325 40.909 0.00 0.00 0.00 2.71
3408 4040 3.307480 GGCCCTAGAACTTTCAAGCAGTA 60.307 47.826 0.00 0.00 0.00 2.74
3442 4074 8.506168 AAAACTGAAACTGAACTCACTAATGA 57.494 30.769 0.00 0.00 0.00 2.57
3446 4078 7.868415 ACTGAAACTGAACTCACTAATGACTAC 59.132 37.037 0.00 0.00 0.00 2.73
3447 4079 7.952671 TGAAACTGAACTCACTAATGACTACT 58.047 34.615 0.00 0.00 0.00 2.57
3448 4080 8.082852 TGAAACTGAACTCACTAATGACTACTC 58.917 37.037 0.00 0.00 0.00 2.59
3449 4081 6.518208 ACTGAACTCACTAATGACTACTCC 57.482 41.667 0.00 0.00 0.00 3.85
3450 4082 5.419471 ACTGAACTCACTAATGACTACTCCC 59.581 44.000 0.00 0.00 0.00 4.30
3451 4083 5.580998 TGAACTCACTAATGACTACTCCCT 58.419 41.667 0.00 0.00 0.00 4.20
3452 4084 5.652891 TGAACTCACTAATGACTACTCCCTC 59.347 44.000 0.00 0.00 0.00 4.30
3453 4085 4.538738 ACTCACTAATGACTACTCCCTCC 58.461 47.826 0.00 0.00 0.00 4.30
3454 4086 3.552875 TCACTAATGACTACTCCCTCCG 58.447 50.000 0.00 0.00 0.00 4.63
3455 4087 3.053842 TCACTAATGACTACTCCCTCCGT 60.054 47.826 0.00 0.00 0.00 4.69
3456 4088 3.315749 CACTAATGACTACTCCCTCCGTC 59.684 52.174 0.00 0.00 0.00 4.79
3457 4089 1.777941 AATGACTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
3458 4090 0.106116 ATGACTACTCCCTCCGTCCC 60.106 60.000 0.00 0.00 0.00 4.46
3459 4091 1.305623 GACTACTCCCTCCGTCCCA 59.694 63.158 0.00 0.00 0.00 4.37
3460 4092 0.324091 GACTACTCCCTCCGTCCCAA 60.324 60.000 0.00 0.00 0.00 4.12
3461 4093 0.614134 ACTACTCCCTCCGTCCCAAC 60.614 60.000 0.00 0.00 0.00 3.77
3462 4094 0.613853 CTACTCCCTCCGTCCCAACA 60.614 60.000 0.00 0.00 0.00 3.33
3463 4095 0.042131 TACTCCCTCCGTCCCAACAT 59.958 55.000 0.00 0.00 0.00 2.71
3464 4096 0.840722 ACTCCCTCCGTCCCAACATT 60.841 55.000 0.00 0.00 0.00 2.71
3465 4097 0.107654 CTCCCTCCGTCCCAACATTC 60.108 60.000 0.00 0.00 0.00 2.67
3466 4098 0.546747 TCCCTCCGTCCCAACATTCT 60.547 55.000 0.00 0.00 0.00 2.40
3467 4099 0.328258 CCCTCCGTCCCAACATTCTT 59.672 55.000 0.00 0.00 0.00 2.52
3468 4100 1.453155 CCTCCGTCCCAACATTCTTG 58.547 55.000 0.00 0.00 0.00 3.02
3469 4101 1.271379 CCTCCGTCCCAACATTCTTGT 60.271 52.381 0.00 0.00 37.82 3.16
3470 4102 2.076863 CTCCGTCCCAACATTCTTGTC 58.923 52.381 0.00 0.00 34.06 3.18
3471 4103 1.697432 TCCGTCCCAACATTCTTGTCT 59.303 47.619 0.00 0.00 34.06 3.41
3472 4104 2.105821 TCCGTCCCAACATTCTTGTCTT 59.894 45.455 0.00 0.00 34.06 3.01
3473 4105 3.325425 TCCGTCCCAACATTCTTGTCTTA 59.675 43.478 0.00 0.00 34.06 2.10
3474 4106 3.684788 CCGTCCCAACATTCTTGTCTTAG 59.315 47.826 0.00 0.00 34.06 2.18
3475 4107 4.562757 CCGTCCCAACATTCTTGTCTTAGA 60.563 45.833 0.00 0.00 34.06 2.10
3476 4108 5.178797 CGTCCCAACATTCTTGTCTTAGAT 58.821 41.667 0.00 0.00 34.06 1.98
3477 4109 5.643777 CGTCCCAACATTCTTGTCTTAGATT 59.356 40.000 0.00 0.00 34.06 2.40
3478 4110 6.149474 CGTCCCAACATTCTTGTCTTAGATTT 59.851 38.462 0.00 0.00 34.06 2.17
3479 4111 7.333423 CGTCCCAACATTCTTGTCTTAGATTTA 59.667 37.037 0.00 0.00 34.06 1.40
3480 4112 9.178758 GTCCCAACATTCTTGTCTTAGATTTAT 57.821 33.333 0.00 0.00 34.06 1.40
3481 4113 9.396022 TCCCAACATTCTTGTCTTAGATTTATC 57.604 33.333 0.00 0.00 34.06 1.75
3482 4114 8.624776 CCCAACATTCTTGTCTTAGATTTATCC 58.375 37.037 0.00 0.00 34.06 2.59
3483 4115 9.177608 CCAACATTCTTGTCTTAGATTTATCCA 57.822 33.333 0.00 0.00 34.06 3.41
3490 4122 9.542462 TCTTGTCTTAGATTTATCCAAATACGG 57.458 33.333 0.00 0.00 34.44 4.02
3491 4123 9.542462 CTTGTCTTAGATTTATCCAAATACGGA 57.458 33.333 0.00 0.00 40.07 4.69
3493 4125 9.489084 TGTCTTAGATTTATCCAAATACGGATG 57.511 33.333 2.67 0.00 45.65 3.51
3494 4126 9.490379 GTCTTAGATTTATCCAAATACGGATGT 57.510 33.333 2.67 0.00 45.65 3.06
3501 4133 9.793259 ATTTATCCAAATACGGATGTATGAAGT 57.207 29.630 2.67 0.00 45.65 3.01
3502 4134 8.827177 TTATCCAAATACGGATGTATGAAGTC 57.173 34.615 2.67 0.00 45.65 3.01
3503 4135 6.228616 TCCAAATACGGATGTATGAAGTCA 57.771 37.500 0.00 0.00 40.42 3.41
3504 4136 6.046593 TCCAAATACGGATGTATGAAGTCAC 58.953 40.000 0.00 0.00 40.42 3.67
3505 4137 5.051039 CCAAATACGGATGTATGAAGTCACG 60.051 44.000 0.00 0.00 40.42 4.35
3506 4138 4.913335 ATACGGATGTATGAAGTCACGT 57.087 40.909 0.00 0.00 39.81 4.49
3507 4139 3.587797 ACGGATGTATGAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
3508 4140 3.921677 ACGGATGTATGAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
3509 4141 4.312443 ACGGATGTATGAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
3510 4142 5.472148 ACGGATGTATGAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
3511 4143 5.575606 ACGGATGTATGAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
3512 4144 5.575606 CGGATGTATGAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
3513 4145 6.748658 CGGATGTATGAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
3514 4146 7.044249 CGGATGTATGAAGTCACGTTTTAGTAG 60.044 40.741 0.00 0.00 0.00 2.57
3515 4147 7.758528 GGATGTATGAAGTCACGTTTTAGTAGT 59.241 37.037 0.00 0.00 0.00 2.73
3516 4148 9.778993 GATGTATGAAGTCACGTTTTAGTAGTA 57.221 33.333 0.00 0.00 0.00 1.82
3517 4149 9.784680 ATGTATGAAGTCACGTTTTAGTAGTAG 57.215 33.333 0.00 0.00 0.00 2.57
3518 4150 8.239314 TGTATGAAGTCACGTTTTAGTAGTAGG 58.761 37.037 0.00 0.00 0.00 3.18
3519 4151 6.639632 TGAAGTCACGTTTTAGTAGTAGGT 57.360 37.500 0.00 0.00 0.00 3.08
3520 4152 7.744087 TGAAGTCACGTTTTAGTAGTAGGTA 57.256 36.000 0.00 0.00 0.00 3.08
3521 4153 7.584987 TGAAGTCACGTTTTAGTAGTAGGTAC 58.415 38.462 0.00 0.00 0.00 3.34
3522 4154 7.228507 TGAAGTCACGTTTTAGTAGTAGGTACA 59.771 37.037 0.00 0.00 33.55 2.90
3523 4155 7.693969 AGTCACGTTTTAGTAGTAGGTACAT 57.306 36.000 0.00 0.00 33.55 2.29
3524 4156 7.756558 AGTCACGTTTTAGTAGTAGGTACATC 58.243 38.462 0.00 0.00 33.55 3.06
3525 4157 6.969473 GTCACGTTTTAGTAGTAGGTACATCC 59.031 42.308 0.00 0.00 33.55 3.51
3526 4158 5.967674 CACGTTTTAGTAGTAGGTACATCCG 59.032 44.000 0.00 0.00 41.99 4.18
3527 4159 5.648092 ACGTTTTAGTAGTAGGTACATCCGT 59.352 40.000 0.00 0.00 41.99 4.69
3528 4160 6.821665 ACGTTTTAGTAGTAGGTACATCCGTA 59.178 38.462 0.00 0.00 41.99 4.02
3529 4161 7.499232 ACGTTTTAGTAGTAGGTACATCCGTAT 59.501 37.037 0.00 0.00 41.99 3.06
3530 4162 8.012241 CGTTTTAGTAGTAGGTACATCCGTATC 58.988 40.741 0.00 0.00 41.99 2.24
3531 4163 9.061435 GTTTTAGTAGTAGGTACATCCGTATCT 57.939 37.037 0.00 0.00 41.99 1.98
3535 4167 8.614469 AGTAGTAGGTACATCCGTATCTAAAC 57.386 38.462 0.00 0.00 41.84 2.01
3536 4168 8.213679 AGTAGTAGGTACATCCGTATCTAAACA 58.786 37.037 0.00 0.00 41.84 2.83
3537 4169 7.886629 AGTAGGTACATCCGTATCTAAACAA 57.113 36.000 0.00 0.00 41.84 2.83
3538 4170 8.297470 AGTAGGTACATCCGTATCTAAACAAA 57.703 34.615 0.00 0.00 41.84 2.83
3539 4171 8.921205 AGTAGGTACATCCGTATCTAAACAAAT 58.079 33.333 0.00 0.00 41.84 2.32
3540 4172 8.975439 GTAGGTACATCCGTATCTAAACAAATG 58.025 37.037 0.00 0.00 41.84 2.32
3541 4173 7.562135 AGGTACATCCGTATCTAAACAAATGT 58.438 34.615 0.00 0.00 37.29 2.71
3542 4174 8.698210 AGGTACATCCGTATCTAAACAAATGTA 58.302 33.333 0.00 0.00 37.29 2.29
3543 4175 9.316730 GGTACATCCGTATCTAAACAAATGTAA 57.683 33.333 0.00 0.00 32.58 2.41
3546 4178 9.095065 ACATCCGTATCTAAACAAATGTAAGAC 57.905 33.333 1.86 0.00 0.00 3.01
3547 4179 9.093970 CATCCGTATCTAAACAAATGTAAGACA 57.906 33.333 1.86 0.00 0.00 3.41
3548 4180 9.661563 ATCCGTATCTAAACAAATGTAAGACAA 57.338 29.630 1.86 0.00 0.00 3.18
3549 4181 9.146984 TCCGTATCTAAACAAATGTAAGACAAG 57.853 33.333 1.86 0.00 0.00 3.16
3550 4182 9.146984 CCGTATCTAAACAAATGTAAGACAAGA 57.853 33.333 1.86 0.00 0.00 3.02
3558 4190 8.661352 AACAAATGTAAGACAAGAATTTTGGG 57.339 30.769 7.26 0.00 31.16 4.12
3559 4191 8.017418 ACAAATGTAAGACAAGAATTTTGGGA 57.983 30.769 7.26 0.00 31.16 4.37
3560 4192 7.926018 ACAAATGTAAGACAAGAATTTTGGGAC 59.074 33.333 7.26 0.00 31.16 4.46
3561 4193 5.682943 TGTAAGACAAGAATTTTGGGACG 57.317 39.130 5.68 0.00 0.00 4.79
3562 4194 4.517453 TGTAAGACAAGAATTTTGGGACGG 59.483 41.667 0.00 0.00 0.00 4.79
3563 4195 2.514803 AGACAAGAATTTTGGGACGGG 58.485 47.619 0.00 0.00 0.00 5.28
3564 4196 1.544246 GACAAGAATTTTGGGACGGGG 59.456 52.381 0.00 0.00 0.00 5.73
3565 4197 0.894835 CAAGAATTTTGGGACGGGGG 59.105 55.000 0.00 0.00 0.00 5.40
3582 4214 1.074889 GGGGGAGTACTTCTTTTGGCA 59.925 52.381 0.01 0.00 0.00 4.92
3596 4228 9.529325 ACTTCTTTTGGCAGTTTCTAAAATAAC 57.471 29.630 0.00 0.00 0.00 1.89
3627 4293 4.558697 CGCTCACGAGTCCCAATGAATATA 60.559 45.833 0.00 0.00 43.93 0.86
3631 4297 4.040461 CACGAGTCCCAATGAATATAGGGT 59.960 45.833 0.00 0.00 42.12 4.34
3633 4299 4.283467 CGAGTCCCAATGAATATAGGGTCA 59.717 45.833 0.00 0.00 42.12 4.02
3659 4326 6.599356 TTCTAAAATAAGTTTGGAAGGGGC 57.401 37.500 0.00 0.00 40.58 5.80
3668 4335 1.858739 TTGGAAGGGGCGGCTTATGT 61.859 55.000 9.56 0.00 0.00 2.29
3671 4338 2.588856 GAAGGGGCGGCTTATGTCGT 62.589 60.000 9.56 0.00 44.07 4.34
3672 4339 1.332144 AAGGGGCGGCTTATGTCGTA 61.332 55.000 9.56 0.00 44.07 3.43
3680 4347 3.141002 GGCTTATGTCGTAAGTCGTCA 57.859 47.619 12.41 0.00 41.55 4.35
3684 4351 5.063060 GGCTTATGTCGTAAGTCGTCAAAAT 59.937 40.000 12.41 0.00 41.55 1.82
3688 4355 5.827568 TGTCGTAAGTCGTCAAAATAACC 57.172 39.130 0.00 0.00 40.80 2.85
3715 4382 9.227777 GGAGCCTAAACAGTTTATCTTTTTAGA 57.772 33.333 6.20 0.00 43.50 2.10
3780 4448 5.661312 AGCATATCAAGTACTCCCACAAGTA 59.339 40.000 0.00 0.00 0.00 2.24
3795 4463 6.272792 TCCCACAAGTAAAATACTCCCAAGTA 59.727 38.462 0.00 0.00 42.10 2.24
3811 4479 8.630037 ACTCCCAAGTATTTTTGTCTGTAAAAG 58.370 33.333 0.00 0.00 32.59 2.27
3814 4482 9.981114 CCCAAGTATTTTTGTCTGTAAAAGAAT 57.019 29.630 0.00 0.00 36.40 2.40
3845 4513 8.671384 TTCATCCGTATATGGGTTTCTTAAAG 57.329 34.615 11.19 0.00 0.00 1.85
3857 4525 9.945904 ATGGGTTTCTTAAAGTTGTAAAACAAA 57.054 25.926 0.00 0.00 40.15 2.83
3889 4557 7.543172 CACAATGTATGGAATTTCAGAACCAAG 59.457 37.037 0.00 0.00 36.00 3.61
4133 4820 2.374839 TCACAATCACAATCCAGACCCA 59.625 45.455 0.00 0.00 0.00 4.51
4134 4821 3.156293 CACAATCACAATCCAGACCCAA 58.844 45.455 0.00 0.00 0.00 4.12
4171 4858 4.776435 TCACAATCTCCATGGCTTGATA 57.224 40.909 21.26 10.41 0.00 2.15
4174 4861 6.840527 TCACAATCTCCATGGCTTGATATAA 58.159 36.000 21.26 0.00 0.00 0.98
4223 4910 1.341531 AGAAAGGACCATAGGCGATCG 59.658 52.381 11.69 11.69 0.00 3.69
4227 4914 1.179814 GGACCATAGGCGATCGGACT 61.180 60.000 18.30 7.70 38.01 3.85
4240 4927 2.606751 TCGGACTTTCTCTTCCTCCT 57.393 50.000 0.00 0.00 0.00 3.69
4248 4935 3.672295 CTCTTCCTCCTGTGGCGCC 62.672 68.421 22.73 22.73 0.00 6.53
4269 4956 2.671682 GCTGGTTCTCCCCACCTC 59.328 66.667 0.00 0.00 35.07 3.85
4283 4970 1.076777 ACCTCCGATGGCCATTTGG 60.077 57.895 24.98 24.98 38.53 3.28
4307 4994 1.039785 CAGAGATGCGGAGGACCTCA 61.040 60.000 23.06 3.69 35.28 3.86
4332 5019 4.181010 CTGGCGGGAGGGACCATG 62.181 72.222 0.00 0.00 41.20 3.66
4335 5022 4.554036 GCGGGAGGGACCATGCTC 62.554 72.222 0.00 0.00 41.20 4.26
4336 5023 2.765807 CGGGAGGGACCATGCTCT 60.766 66.667 0.00 0.00 41.20 4.09
4337 5024 2.801631 CGGGAGGGACCATGCTCTC 61.802 68.421 0.00 0.00 41.20 3.20
4338 5025 2.801631 GGGAGGGACCATGCTCTCG 61.802 68.421 0.00 0.00 41.20 4.04
4339 5026 2.060980 GGAGGGACCATGCTCTCGT 61.061 63.158 0.00 0.00 38.79 4.18
4340 5027 1.617947 GGAGGGACCATGCTCTCGTT 61.618 60.000 0.00 0.00 38.79 3.85
4341 5028 0.179097 GAGGGACCATGCTCTCGTTC 60.179 60.000 0.00 0.00 0.00 3.95
4342 5029 0.616111 AGGGACCATGCTCTCGTTCT 60.616 55.000 0.00 0.00 0.00 3.01
4343 5030 0.250513 GGGACCATGCTCTCGTTCTT 59.749 55.000 0.00 0.00 0.00 2.52
4344 5031 1.480954 GGGACCATGCTCTCGTTCTTA 59.519 52.381 0.00 0.00 0.00 2.10
4345 5032 2.103263 GGGACCATGCTCTCGTTCTTAT 59.897 50.000 0.00 0.00 0.00 1.73
4346 5033 3.432326 GGGACCATGCTCTCGTTCTTATT 60.432 47.826 0.00 0.00 0.00 1.40
4347 5034 4.202223 GGGACCATGCTCTCGTTCTTATTA 60.202 45.833 0.00 0.00 0.00 0.98
4348 5035 4.985409 GGACCATGCTCTCGTTCTTATTAG 59.015 45.833 0.00 0.00 0.00 1.73
4349 5036 4.950050 ACCATGCTCTCGTTCTTATTAGG 58.050 43.478 0.00 0.00 0.00 2.69
4350 5037 4.406003 ACCATGCTCTCGTTCTTATTAGGT 59.594 41.667 0.00 0.00 0.00 3.08
4351 5038 5.597182 ACCATGCTCTCGTTCTTATTAGGTA 59.403 40.000 0.00 0.00 0.00 3.08
4352 5039 6.267928 ACCATGCTCTCGTTCTTATTAGGTAT 59.732 38.462 0.00 0.00 0.00 2.73
4353 5040 6.809196 CCATGCTCTCGTTCTTATTAGGTATC 59.191 42.308 0.00 0.00 0.00 2.24
4354 5041 7.309499 CCATGCTCTCGTTCTTATTAGGTATCT 60.309 40.741 0.00 0.00 0.00 1.98
4355 5042 7.584122 TGCTCTCGTTCTTATTAGGTATCTT 57.416 36.000 0.00 0.00 0.00 2.40
4356 5043 7.426410 TGCTCTCGTTCTTATTAGGTATCTTG 58.574 38.462 0.00 0.00 0.00 3.02
4357 5044 6.864165 GCTCTCGTTCTTATTAGGTATCTTGG 59.136 42.308 0.00 0.00 0.00 3.61
4358 5045 7.470286 GCTCTCGTTCTTATTAGGTATCTTGGT 60.470 40.741 0.00 0.00 0.00 3.67
4359 5046 8.302515 TCTCGTTCTTATTAGGTATCTTGGTT 57.697 34.615 0.00 0.00 0.00 3.67
4360 5047 8.195436 TCTCGTTCTTATTAGGTATCTTGGTTG 58.805 37.037 0.00 0.00 0.00 3.77
4361 5048 7.270047 TCGTTCTTATTAGGTATCTTGGTTGG 58.730 38.462 0.00 0.00 0.00 3.77
4362 5049 6.482308 CGTTCTTATTAGGTATCTTGGTTGGG 59.518 42.308 0.00 0.00 0.00 4.12
4363 5050 6.509523 TCTTATTAGGTATCTTGGTTGGGG 57.490 41.667 0.00 0.00 0.00 4.96
4364 5051 5.974370 TCTTATTAGGTATCTTGGTTGGGGT 59.026 40.000 0.00 0.00 0.00 4.95
4365 5052 6.449041 TCTTATTAGGTATCTTGGTTGGGGTT 59.551 38.462 0.00 0.00 0.00 4.11
4366 5053 2.899303 AGGTATCTTGGTTGGGGTTG 57.101 50.000 0.00 0.00 0.00 3.77
4367 5054 1.182667 GGTATCTTGGTTGGGGTTGC 58.817 55.000 0.00 0.00 0.00 4.17
4368 5055 0.808755 GTATCTTGGTTGGGGTTGCG 59.191 55.000 0.00 0.00 0.00 4.85
4369 5056 0.963355 TATCTTGGTTGGGGTTGCGC 60.963 55.000 0.00 0.00 0.00 6.09
4370 5057 2.992817 ATCTTGGTTGGGGTTGCGCA 62.993 55.000 5.66 5.66 0.00 6.09
4371 5058 3.211564 CTTGGTTGGGGTTGCGCAG 62.212 63.158 11.31 0.00 0.00 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.471244 GATGGTCGTCCCGCTCTCG 62.471 68.421 0.00 0.00 35.15 4.04
21 22 2.065906 GAGATGGTCGTCCCGCTCTC 62.066 65.000 9.53 8.28 37.42 3.20
22 23 2.043852 AGATGGTCGTCCCGCTCT 60.044 61.111 0.00 0.00 35.15 4.09
23 24 2.413765 GAGATGGTCGTCCCGCTC 59.586 66.667 0.00 0.00 35.15 5.03
24 25 3.148279 GGAGATGGTCGTCCCGCT 61.148 66.667 0.00 0.00 35.15 5.52
25 26 3.140225 GAGGAGATGGTCGTCCCGC 62.140 68.421 0.00 0.00 34.50 6.13
26 27 3.121019 GAGGAGATGGTCGTCCCG 58.879 66.667 0.00 0.00 34.50 5.14
29 30 1.448922 CCGAGGAGGAGATGGTCGTC 61.449 65.000 0.00 0.00 45.00 4.20
30 31 1.454111 CCGAGGAGGAGATGGTCGT 60.454 63.158 0.00 0.00 45.00 4.34
31 32 2.196925 CCCGAGGAGGAGATGGTCG 61.197 68.421 0.00 0.00 45.00 4.79
32 33 1.834822 CCCCGAGGAGGAGATGGTC 60.835 68.421 0.00 0.00 45.00 4.02
33 34 2.283809 CCCCGAGGAGGAGATGGT 59.716 66.667 0.00 0.00 45.00 3.55
34 35 3.237741 GCCCCGAGGAGGAGATGG 61.238 72.222 0.00 0.00 45.00 3.51
35 36 3.237741 GGCCCCGAGGAGGAGATG 61.238 72.222 0.00 0.00 45.00 2.90
36 37 3.767268 TGGCCCCGAGGAGGAGAT 61.767 66.667 0.00 0.00 45.00 2.75
37 38 4.779733 GTGGCCCCGAGGAGGAGA 62.780 72.222 0.00 0.00 45.00 3.71
47 48 4.489771 CTCATCCCACGTGGCCCC 62.490 72.222 29.75 0.00 0.00 5.80
49 50 4.101448 AGCTCATCCCACGTGGCC 62.101 66.667 29.75 11.60 0.00 5.36
50 51 2.512515 GAGCTCATCCCACGTGGC 60.513 66.667 29.75 16.31 0.00 5.01
51 52 2.202797 CGAGCTCATCCCACGTGG 60.203 66.667 28.26 28.26 0.00 4.94
52 53 1.226802 CTCGAGCTCATCCCACGTG 60.227 63.158 15.40 9.08 0.00 4.49
53 54 0.753479 ATCTCGAGCTCATCCCACGT 60.753 55.000 15.40 0.00 0.00 4.49
54 55 0.039617 GATCTCGAGCTCATCCCACG 60.040 60.000 15.40 0.00 0.00 4.94
55 56 0.039617 CGATCTCGAGCTCATCCCAC 60.040 60.000 15.40 0.00 43.02 4.61
56 57 0.179018 TCGATCTCGAGCTCATCCCA 60.179 55.000 15.40 0.00 44.22 4.37
57 58 2.635079 TCGATCTCGAGCTCATCCC 58.365 57.895 15.40 0.00 44.22 3.85
67 68 2.162608 ACTTCCAGAACTGTCGATCTCG 59.837 50.000 0.00 0.00 41.45 4.04
68 69 3.859411 ACTTCCAGAACTGTCGATCTC 57.141 47.619 0.00 0.00 0.00 2.75
69 70 5.533154 CCTATACTTCCAGAACTGTCGATCT 59.467 44.000 0.00 0.00 0.00 2.75
70 71 5.531659 TCCTATACTTCCAGAACTGTCGATC 59.468 44.000 0.00 0.00 0.00 3.69
71 72 5.299782 GTCCTATACTTCCAGAACTGTCGAT 59.700 44.000 0.00 0.00 0.00 3.59
72 73 4.639310 GTCCTATACTTCCAGAACTGTCGA 59.361 45.833 1.18 0.00 0.00 4.20
73 74 4.641094 AGTCCTATACTTCCAGAACTGTCG 59.359 45.833 1.18 0.00 33.35 4.35
74 75 5.220892 CGAGTCCTATACTTCCAGAACTGTC 60.221 48.000 1.18 0.00 39.07 3.51
75 76 4.641094 CGAGTCCTATACTTCCAGAACTGT 59.359 45.833 1.18 0.00 39.07 3.55
76 77 4.036971 CCGAGTCCTATACTTCCAGAACTG 59.963 50.000 0.00 0.00 39.07 3.16
77 78 4.079901 TCCGAGTCCTATACTTCCAGAACT 60.080 45.833 0.00 0.00 39.07 3.01
78 79 4.205587 TCCGAGTCCTATACTTCCAGAAC 58.794 47.826 0.00 0.00 39.07 3.01
79 80 4.515028 TCCGAGTCCTATACTTCCAGAA 57.485 45.455 0.00 0.00 39.07 3.02
80 81 4.506979 GGATCCGAGTCCTATACTTCCAGA 60.507 50.000 0.00 0.00 39.07 3.86
81 82 3.759618 GGATCCGAGTCCTATACTTCCAG 59.240 52.174 0.00 0.00 39.07 3.86
82 83 3.764218 GGATCCGAGTCCTATACTTCCA 58.236 50.000 0.00 0.00 39.07 3.53
83 84 2.748532 CGGATCCGAGTCCTATACTTCC 59.251 54.545 30.62 0.00 39.07 3.46
84 85 2.162008 GCGGATCCGAGTCCTATACTTC 59.838 54.545 37.64 11.02 39.07 3.01
85 86 2.161030 GCGGATCCGAGTCCTATACTT 58.839 52.381 37.64 0.00 39.07 2.24
86 87 1.351683 AGCGGATCCGAGTCCTATACT 59.648 52.381 37.64 18.05 42.80 2.12
87 88 1.469308 CAGCGGATCCGAGTCCTATAC 59.531 57.143 37.64 15.98 42.83 1.47
88 89 1.822506 CAGCGGATCCGAGTCCTATA 58.177 55.000 37.64 0.00 42.83 1.31
89 90 1.528292 GCAGCGGATCCGAGTCCTAT 61.528 60.000 37.64 10.26 42.83 2.57
90 91 2.194212 GCAGCGGATCCGAGTCCTA 61.194 63.158 37.64 0.00 42.83 2.94
91 92 3.532155 GCAGCGGATCCGAGTCCT 61.532 66.667 37.64 21.44 42.83 3.85
92 93 4.593864 GGCAGCGGATCCGAGTCC 62.594 72.222 37.64 26.74 42.83 3.85
93 94 4.593864 GGGCAGCGGATCCGAGTC 62.594 72.222 37.64 27.63 42.83 3.36
98 99 4.241555 ATGACGGGCAGCGGATCC 62.242 66.667 0.00 0.00 0.00 3.36
99 100 2.969238 CATGACGGGCAGCGGATC 60.969 66.667 0.00 0.00 0.00 3.36
110 111 3.032609 GCGATCTCCGGCATGACG 61.033 66.667 15.88 15.88 39.04 4.35
117 118 1.175347 TCTCATCTGGCGATCTCCGG 61.175 60.000 3.99 3.99 39.04 5.14
118 119 0.240678 CTCTCATCTGGCGATCTCCG 59.759 60.000 0.00 0.00 42.21 4.63
119 120 0.038343 GCTCTCATCTGGCGATCTCC 60.038 60.000 0.00 0.00 0.00 3.71
120 121 0.961019 AGCTCTCATCTGGCGATCTC 59.039 55.000 0.00 0.00 0.00 2.75
121 122 1.068895 CAAGCTCTCATCTGGCGATCT 59.931 52.381 0.00 0.00 0.00 2.75
122 123 1.500108 CAAGCTCTCATCTGGCGATC 58.500 55.000 0.00 0.00 0.00 3.69
123 124 0.106335 CCAAGCTCTCATCTGGCGAT 59.894 55.000 0.00 0.00 0.00 4.58
124 125 1.519246 CCAAGCTCTCATCTGGCGA 59.481 57.895 0.00 0.00 0.00 5.54
125 126 1.523258 CCCAAGCTCTCATCTGGCG 60.523 63.158 0.00 0.00 0.00 5.69
126 127 0.747283 CACCCAAGCTCTCATCTGGC 60.747 60.000 0.00 0.00 0.00 4.85
127 128 0.107312 CCACCCAAGCTCTCATCTGG 60.107 60.000 0.00 0.00 0.00 3.86
128 129 0.747283 GCCACCCAAGCTCTCATCTG 60.747 60.000 0.00 0.00 0.00 2.90
129 130 1.203441 TGCCACCCAAGCTCTCATCT 61.203 55.000 0.00 0.00 0.00 2.90
130 131 0.747283 CTGCCACCCAAGCTCTCATC 60.747 60.000 0.00 0.00 0.00 2.92
131 132 1.203441 TCTGCCACCCAAGCTCTCAT 61.203 55.000 0.00 0.00 0.00 2.90
132 133 1.418097 TTCTGCCACCCAAGCTCTCA 61.418 55.000 0.00 0.00 0.00 3.27
133 134 0.676151 CTTCTGCCACCCAAGCTCTC 60.676 60.000 0.00 0.00 0.00 3.20
134 135 1.130054 TCTTCTGCCACCCAAGCTCT 61.130 55.000 0.00 0.00 0.00 4.09
135 136 0.676151 CTCTTCTGCCACCCAAGCTC 60.676 60.000 0.00 0.00 0.00 4.09
136 137 1.130054 TCTCTTCTGCCACCCAAGCT 61.130 55.000 0.00 0.00 0.00 3.74
137 138 0.676151 CTCTCTTCTGCCACCCAAGC 60.676 60.000 0.00 0.00 0.00 4.01
138 139 0.689623 ACTCTCTTCTGCCACCCAAG 59.310 55.000 0.00 0.00 0.00 3.61
139 140 0.397941 CACTCTCTTCTGCCACCCAA 59.602 55.000 0.00 0.00 0.00 4.12
140 141 0.471780 TCACTCTCTTCTGCCACCCA 60.472 55.000 0.00 0.00 0.00 4.51
141 142 0.687354 TTCACTCTCTTCTGCCACCC 59.313 55.000 0.00 0.00 0.00 4.61
142 143 2.550830 TTTCACTCTCTTCTGCCACC 57.449 50.000 0.00 0.00 0.00 4.61
143 144 3.668447 TCATTTCACTCTCTTCTGCCAC 58.332 45.455 0.00 0.00 0.00 5.01
144 145 4.202398 ACTTCATTTCACTCTCTTCTGCCA 60.202 41.667 0.00 0.00 0.00 4.92
145 146 4.153835 CACTTCATTTCACTCTCTTCTGCC 59.846 45.833 0.00 0.00 0.00 4.85
146 147 4.153835 CCACTTCATTTCACTCTCTTCTGC 59.846 45.833 0.00 0.00 0.00 4.26
147 148 4.153835 GCCACTTCATTTCACTCTCTTCTG 59.846 45.833 0.00 0.00 0.00 3.02
148 149 4.041444 AGCCACTTCATTTCACTCTCTTCT 59.959 41.667 0.00 0.00 0.00 2.85
149 150 4.322567 AGCCACTTCATTTCACTCTCTTC 58.677 43.478 0.00 0.00 0.00 2.87
150 151 4.363991 AGCCACTTCATTTCACTCTCTT 57.636 40.909 0.00 0.00 0.00 2.85
151 152 5.426504 CATAGCCACTTCATTTCACTCTCT 58.573 41.667 0.00 0.00 0.00 3.10
152 153 4.574013 CCATAGCCACTTCATTTCACTCTC 59.426 45.833 0.00 0.00 0.00 3.20
153 154 4.018960 ACCATAGCCACTTCATTTCACTCT 60.019 41.667 0.00 0.00 0.00 3.24
154 155 4.265073 ACCATAGCCACTTCATTTCACTC 58.735 43.478 0.00 0.00 0.00 3.51
155 156 4.307032 ACCATAGCCACTTCATTTCACT 57.693 40.909 0.00 0.00 0.00 3.41
156 157 5.048083 TCAAACCATAGCCACTTCATTTCAC 60.048 40.000 0.00 0.00 0.00 3.18
157 158 5.076182 TCAAACCATAGCCACTTCATTTCA 58.924 37.500 0.00 0.00 0.00 2.69
158 159 5.643379 TCAAACCATAGCCACTTCATTTC 57.357 39.130 0.00 0.00 0.00 2.17
159 160 5.127682 GGATCAAACCATAGCCACTTCATTT 59.872 40.000 0.00 0.00 0.00 2.32
160 161 4.646492 GGATCAAACCATAGCCACTTCATT 59.354 41.667 0.00 0.00 0.00 2.57
161 162 4.210331 GGATCAAACCATAGCCACTTCAT 58.790 43.478 0.00 0.00 0.00 2.57
162 163 3.620488 GGATCAAACCATAGCCACTTCA 58.380 45.455 0.00 0.00 0.00 3.02
163 164 2.614057 CGGATCAAACCATAGCCACTTC 59.386 50.000 0.00 0.00 0.00 3.01
164 165 2.026262 ACGGATCAAACCATAGCCACTT 60.026 45.455 0.00 0.00 0.00 3.16
165 166 1.559682 ACGGATCAAACCATAGCCACT 59.440 47.619 0.00 0.00 0.00 4.00
166 167 1.940613 GACGGATCAAACCATAGCCAC 59.059 52.381 0.00 0.00 0.00 5.01
167 168 1.472552 CGACGGATCAAACCATAGCCA 60.473 52.381 0.00 0.00 0.00 4.75
168 169 1.202486 TCGACGGATCAAACCATAGCC 60.202 52.381 0.00 0.00 0.00 3.93
169 170 2.128035 CTCGACGGATCAAACCATAGC 58.872 52.381 0.00 0.00 0.00 2.97
170 171 2.128035 GCTCGACGGATCAAACCATAG 58.872 52.381 0.00 0.00 0.00 2.23
171 172 1.535226 CGCTCGACGGATCAAACCATA 60.535 52.381 0.00 0.00 38.44 2.74
172 173 0.806102 CGCTCGACGGATCAAACCAT 60.806 55.000 0.00 0.00 38.44 3.55
173 174 1.445410 CGCTCGACGGATCAAACCA 60.445 57.895 0.00 0.00 38.44 3.67
174 175 3.384927 CGCTCGACGGATCAAACC 58.615 61.111 0.00 0.00 38.44 3.27
183 184 2.278857 CTTCCCATCCGCTCGACG 60.279 66.667 0.00 0.00 43.15 5.12
184 185 1.956629 TTCCTTCCCATCCGCTCGAC 61.957 60.000 0.00 0.00 0.00 4.20
185 186 1.048724 ATTCCTTCCCATCCGCTCGA 61.049 55.000 0.00 0.00 0.00 4.04
186 187 0.679505 TATTCCTTCCCATCCGCTCG 59.320 55.000 0.00 0.00 0.00 5.03
187 188 4.080863 ACATATATTCCTTCCCATCCGCTC 60.081 45.833 0.00 0.00 0.00 5.03
188 189 3.846588 ACATATATTCCTTCCCATCCGCT 59.153 43.478 0.00 0.00 0.00 5.52
189 190 3.941483 CACATATATTCCTTCCCATCCGC 59.059 47.826 0.00 0.00 0.00 5.54
190 191 5.420725 TCACATATATTCCTTCCCATCCG 57.579 43.478 0.00 0.00 0.00 4.18
191 192 5.251700 ACCTCACATATATTCCTTCCCATCC 59.748 44.000 0.00 0.00 0.00 3.51
192 193 6.380079 ACCTCACATATATTCCTTCCCATC 57.620 41.667 0.00 0.00 0.00 3.51
193 194 5.046304 CGACCTCACATATATTCCTTCCCAT 60.046 44.000 0.00 0.00 0.00 4.00
194 195 4.283467 CGACCTCACATATATTCCTTCCCA 59.717 45.833 0.00 0.00 0.00 4.37
195 196 4.527038 TCGACCTCACATATATTCCTTCCC 59.473 45.833 0.00 0.00 0.00 3.97
196 197 5.244178 ACTCGACCTCACATATATTCCTTCC 59.756 44.000 0.00 0.00 0.00 3.46
197 198 6.153067 CACTCGACCTCACATATATTCCTTC 58.847 44.000 0.00 0.00 0.00 3.46
198 199 5.011125 CCACTCGACCTCACATATATTCCTT 59.989 44.000 0.00 0.00 0.00 3.36
199 200 4.524714 CCACTCGACCTCACATATATTCCT 59.475 45.833 0.00 0.00 0.00 3.36
200 201 4.322049 CCCACTCGACCTCACATATATTCC 60.322 50.000 0.00 0.00 0.00 3.01
201 202 4.810790 CCCACTCGACCTCACATATATTC 58.189 47.826 0.00 0.00 0.00 1.75
202 203 3.006967 GCCCACTCGACCTCACATATATT 59.993 47.826 0.00 0.00 0.00 1.28
203 204 2.563179 GCCCACTCGACCTCACATATAT 59.437 50.000 0.00 0.00 0.00 0.86
204 205 1.961394 GCCCACTCGACCTCACATATA 59.039 52.381 0.00 0.00 0.00 0.86
205 206 0.753262 GCCCACTCGACCTCACATAT 59.247 55.000 0.00 0.00 0.00 1.78
206 207 1.327690 GGCCCACTCGACCTCACATA 61.328 60.000 0.00 0.00 0.00 2.29
207 208 2.660064 GGCCCACTCGACCTCACAT 61.660 63.158 0.00 0.00 0.00 3.21
208 209 3.311110 GGCCCACTCGACCTCACA 61.311 66.667 0.00 0.00 0.00 3.58
209 210 2.879233 TTGGCCCACTCGACCTCAC 61.879 63.158 0.00 0.00 0.00 3.51
210 211 2.525629 TTGGCCCACTCGACCTCA 60.526 61.111 0.00 0.00 0.00 3.86
211 212 2.047179 GTTGGCCCACTCGACCTC 60.047 66.667 0.00 0.00 0.00 3.85
212 213 4.003788 CGTTGGCCCACTCGACCT 62.004 66.667 5.29 0.00 0.00 3.85
213 214 4.309950 ACGTTGGCCCACTCGACC 62.310 66.667 13.27 0.00 0.00 4.79
214 215 3.041940 CACGTTGGCCCACTCGAC 61.042 66.667 13.27 0.00 0.00 4.20
215 216 4.308458 CCACGTTGGCCCACTCGA 62.308 66.667 13.27 0.00 0.00 4.04
236 237 4.736896 GTCCGCCACGTCAGACCC 62.737 72.222 0.00 0.00 0.00 4.46
256 257 0.896226 GGATATAGGGGCGTCTGGAC 59.104 60.000 0.00 0.00 0.00 4.02
257 258 0.611062 CGGATATAGGGGCGTCTGGA 60.611 60.000 0.00 0.00 0.00 3.86
258 259 0.898789 ACGGATATAGGGGCGTCTGG 60.899 60.000 0.00 0.00 0.00 3.86
259 260 0.526662 GACGGATATAGGGGCGTCTG 59.473 60.000 0.00 0.00 0.00 3.51
260 261 0.611340 GGACGGATATAGGGGCGTCT 60.611 60.000 0.00 0.00 0.00 4.18
261 262 0.611340 AGGACGGATATAGGGGCGTC 60.611 60.000 0.00 0.00 0.00 5.19
262 263 0.700564 TAGGACGGATATAGGGGCGT 59.299 55.000 0.00 0.00 0.00 5.68
274 275 1.209504 TCCAGCCAAAATCTAGGACGG 59.790 52.381 0.00 0.00 0.00 4.79
276 277 6.881602 CCTAATATCCAGCCAAAATCTAGGAC 59.118 42.308 0.00 0.00 0.00 3.85
279 280 6.183347 CCCCTAATATCCAGCCAAAATCTAG 58.817 44.000 0.00 0.00 0.00 2.43
280 281 5.615261 ACCCCTAATATCCAGCCAAAATCTA 59.385 40.000 0.00 0.00 0.00 1.98
281 282 4.420214 ACCCCTAATATCCAGCCAAAATCT 59.580 41.667 0.00 0.00 0.00 2.40
287 288 0.771127 GCACCCCTAATATCCAGCCA 59.229 55.000 0.00 0.00 0.00 4.75
290 291 0.324943 CCGGCACCCCTAATATCCAG 59.675 60.000 0.00 0.00 0.00 3.86
313 314 2.046604 ACCTTAAACGCCCGAGGC 60.047 61.111 4.96 4.96 46.75 4.70
316 317 2.098426 AACGGACCTTAAACGCCCGA 62.098 55.000 0.00 0.00 42.49 5.14
320 321 0.794473 CCTCAACGGACCTTAAACGC 59.206 55.000 0.00 0.00 33.16 4.84
326 327 3.591254 GAGCGCCTCAACGGACCTT 62.591 63.158 2.29 0.00 33.16 3.50
332 333 2.169789 CCAGATGAGCGCCTCAACG 61.170 63.158 2.29 3.47 44.04 4.10
336 337 1.817099 CAACCCAGATGAGCGCCTC 60.817 63.158 2.29 1.22 0.00 4.70
337 338 2.270205 CAACCCAGATGAGCGCCT 59.730 61.111 2.29 0.00 0.00 5.52
338 339 3.512516 GCAACCCAGATGAGCGCC 61.513 66.667 2.29 0.00 0.00 6.53
340 341 1.959042 ATAAGCAACCCAGATGAGCG 58.041 50.000 0.00 0.00 0.00 5.03
341 342 5.532406 TCATAAATAAGCAACCCAGATGAGC 59.468 40.000 0.00 0.00 0.00 4.26
342 343 6.016777 GGTCATAAATAAGCAACCCAGATGAG 60.017 42.308 0.00 0.00 0.00 2.90
345 346 4.821805 CGGTCATAAATAAGCAACCCAGAT 59.178 41.667 0.00 0.00 0.00 2.90
350 352 6.560253 ATGATCGGTCATAAATAAGCAACC 57.440 37.500 10.07 0.00 43.18 3.77
355 357 6.821482 CGGTCAATGATCGGTCATAAATAAG 58.179 40.000 12.49 0.00 44.20 1.73
369 371 1.224592 GGACAGCCCGGTCAATGAT 59.775 57.895 0.00 0.00 39.59 2.45
389 391 2.672996 CCCACCTCAAACGCCAGG 60.673 66.667 0.00 0.00 35.69 4.45
390 392 1.106944 AAACCCACCTCAAACGCCAG 61.107 55.000 0.00 0.00 0.00 4.85
391 393 0.183014 TAAACCCACCTCAAACGCCA 59.817 50.000 0.00 0.00 0.00 5.69
393 395 0.879090 CCTAAACCCACCTCAAACGC 59.121 55.000 0.00 0.00 0.00 4.84
418 421 4.572389 GCCCATTAAGAGCATATACATCGG 59.428 45.833 0.00 0.00 0.00 4.18
419 422 5.178061 TGCCCATTAAGAGCATATACATCG 58.822 41.667 0.00 0.00 0.00 3.84
421 424 5.416952 GCTTGCCCATTAAGAGCATATACAT 59.583 40.000 0.00 0.00 36.20 2.29
426 429 2.586425 GGCTTGCCCATTAAGAGCATA 58.414 47.619 0.00 0.00 36.20 3.14
468 471 2.423892 CACGAGTCTACATGGTAGTGCT 59.576 50.000 0.00 3.86 0.00 4.40
608 625 2.445438 GCGGAAGAAGAAGGCGACG 61.445 63.158 0.00 0.00 0.00 5.12
621 638 1.068055 GTTCAGTTCCTACTCGCGGAA 60.068 52.381 6.13 0.00 38.18 4.30
630 647 4.274147 TGTTTTTGCCAGTTCAGTTCCTA 58.726 39.130 0.00 0.00 0.00 2.94
867 885 4.722700 CCCTCAACCGCACCCCAG 62.723 72.222 0.00 0.00 0.00 4.45
906 924 0.389391 CAACGATGTCCGGCCTCTAT 59.611 55.000 0.00 0.00 43.93 1.98
907 925 1.813859 CAACGATGTCCGGCCTCTA 59.186 57.895 0.00 0.00 43.93 2.43
917 935 0.392706 TGTCCAGTGAGCAACGATGT 59.607 50.000 0.00 0.00 0.00 3.06
939 957 0.801251 GCACTCTCACCATCAACTGC 59.199 55.000 0.00 0.00 0.00 4.40
942 960 2.462456 TCAGCACTCTCACCATCAAC 57.538 50.000 0.00 0.00 0.00 3.18
943 961 3.141398 GTTTCAGCACTCTCACCATCAA 58.859 45.455 0.00 0.00 0.00 2.57
950 968 1.334160 TACCCGTTTCAGCACTCTCA 58.666 50.000 0.00 0.00 0.00 3.27
1022 1040 3.322254 GGAGTTCTTCAGTCCTTCACTCA 59.678 47.826 0.00 0.00 41.51 3.41
1062 1085 1.747709 TACCTCGAGGAAGGAAGACG 58.252 55.000 37.69 7.48 38.87 4.18
1123 1146 2.420129 CGACCCCTAGTCATGGAAAAGG 60.420 54.545 0.00 0.00 46.69 3.11
1127 1150 1.335132 GCCGACCCCTAGTCATGGAA 61.335 60.000 0.00 0.00 46.69 3.53
1321 1344 5.344884 TGGATGAAAACTGAAAACGTTTCC 58.655 37.500 15.01 1.00 33.76 3.13
1333 1461 6.479884 ACAGAATCTAAGCTGGATGAAAACT 58.520 36.000 3.63 0.00 36.47 2.66
1392 1520 7.030165 CACTGAGGTACTGATAAACACTACTG 58.970 42.308 0.00 0.00 41.55 2.74
1403 2006 5.189736 TCCAATTTAGCACTGAGGTACTGAT 59.810 40.000 0.00 0.00 41.55 2.90
1545 2153 6.229733 AGGCTAAGATCAGCTCAATTCATAC 58.770 40.000 5.15 0.00 41.50 2.39
1598 2210 3.323243 GGCGAAAGAGCTAAGTTGTACA 58.677 45.455 0.00 0.00 37.29 2.90
1791 2403 2.868504 TGGGAAGTCCAAGCTCCTT 58.131 52.632 0.00 0.00 43.84 3.36
2085 2697 1.064946 CGTCCTGATCGTCTCCAGC 59.935 63.158 0.00 0.00 0.00 4.85
2261 2873 2.993937 TGAAGGAAAAACACGTGAGGT 58.006 42.857 25.01 3.72 0.00 3.85
2356 2970 0.249398 CCGGGGTCAGGTACTTCTTG 59.751 60.000 0.00 0.00 34.60 3.02
2502 3116 4.689612 ACTGTACTGGAATTCTGTGTGT 57.310 40.909 5.23 0.83 0.00 3.72
2503 3117 5.784177 AGTACTGTACTGGAATTCTGTGTG 58.216 41.667 19.09 3.37 37.69 3.82
2525 3139 6.080648 TGCCACTGGTTTAGATATACGTAG 57.919 41.667 0.08 0.00 0.00 3.51
2527 3141 4.404715 ACTGCCACTGGTTTAGATATACGT 59.595 41.667 0.00 0.00 0.00 3.57
2528 3142 4.745125 CACTGCCACTGGTTTAGATATACG 59.255 45.833 0.00 0.00 0.00 3.06
2529 3143 4.511826 GCACTGCCACTGGTTTAGATATAC 59.488 45.833 0.00 0.00 0.00 1.47
2531 3145 3.545703 GCACTGCCACTGGTTTAGATAT 58.454 45.455 0.00 0.00 0.00 1.63
2991 3608 1.153107 CATGAAGGAGATGCCGGCA 60.153 57.895 34.80 34.80 43.43 5.69
3116 3745 2.513666 TTCATGGCCGATCACCGC 60.514 61.111 0.00 0.00 36.84 5.68
3145 3774 3.992943 TTGACGGTCACCATAATCCTT 57.007 42.857 10.97 0.00 0.00 3.36
3146 3775 3.992943 TTTGACGGTCACCATAATCCT 57.007 42.857 10.97 0.00 0.00 3.24
3147 3776 4.638421 TGATTTTGACGGTCACCATAATCC 59.362 41.667 10.97 0.00 33.07 3.01
3148 3777 5.584649 TCTGATTTTGACGGTCACCATAATC 59.415 40.000 10.97 15.86 33.96 1.75
3204 3834 3.005897 GGATTCAATCGCACTAGGCTCTA 59.994 47.826 0.00 0.00 41.67 2.43
3296 3926 2.869801 GGTGCCATAAATCAATCGACGA 59.130 45.455 0.00 0.00 0.00 4.20
3350 3980 2.866156 GCAAAGTTGAAGGTCCAAAAGC 59.134 45.455 0.00 0.00 0.00 3.51
3408 4040 7.547227 AGTTCAGTTTCAGTTTTATGCTTTGT 58.453 30.769 0.00 0.00 0.00 2.83
3442 4074 0.614134 GTTGGGACGGAGGGAGTAGT 60.614 60.000 0.00 0.00 0.00 2.73
3446 4078 0.107654 GAATGTTGGGACGGAGGGAG 60.108 60.000 0.00 0.00 0.00 4.30
3447 4079 0.546747 AGAATGTTGGGACGGAGGGA 60.547 55.000 0.00 0.00 0.00 4.20
3448 4080 0.328258 AAGAATGTTGGGACGGAGGG 59.672 55.000 0.00 0.00 0.00 4.30
3449 4081 1.271379 ACAAGAATGTTGGGACGGAGG 60.271 52.381 0.00 0.00 35.91 4.30
3450 4082 2.076863 GACAAGAATGTTGGGACGGAG 58.923 52.381 0.00 0.00 40.74 4.63
3451 4083 1.697432 AGACAAGAATGTTGGGACGGA 59.303 47.619 0.00 0.00 40.74 4.69
3452 4084 2.185004 AGACAAGAATGTTGGGACGG 57.815 50.000 0.00 0.00 40.74 4.79
3453 4085 4.566004 TCTAAGACAAGAATGTTGGGACG 58.434 43.478 0.00 0.00 40.74 4.79
3454 4086 7.454260 AAATCTAAGACAAGAATGTTGGGAC 57.546 36.000 0.00 0.00 40.74 4.46
3455 4087 9.396022 GATAAATCTAAGACAAGAATGTTGGGA 57.604 33.333 0.00 0.00 40.74 4.37
3456 4088 8.624776 GGATAAATCTAAGACAAGAATGTTGGG 58.375 37.037 0.00 0.00 40.74 4.12
3457 4089 9.177608 TGGATAAATCTAAGACAAGAATGTTGG 57.822 33.333 0.00 0.00 40.74 3.77
3464 4096 9.542462 CCGTATTTGGATAAATCTAAGACAAGA 57.458 33.333 0.00 0.00 37.64 3.02
3465 4097 9.542462 TCCGTATTTGGATAAATCTAAGACAAG 57.458 33.333 0.00 0.00 37.64 3.16
3480 4112 6.046593 GTGACTTCATACATCCGTATTTGGA 58.953 40.000 0.00 0.00 43.58 3.53
3481 4113 5.051039 CGTGACTTCATACATCCGTATTTGG 60.051 44.000 0.00 0.00 36.11 3.28
3482 4114 5.518847 ACGTGACTTCATACATCCGTATTTG 59.481 40.000 0.00 0.00 36.11 2.32
3483 4115 5.657474 ACGTGACTTCATACATCCGTATTT 58.343 37.500 0.00 0.00 36.11 1.40
3484 4116 5.258456 ACGTGACTTCATACATCCGTATT 57.742 39.130 0.00 0.00 36.11 1.89
3485 4117 4.913335 ACGTGACTTCATACATCCGTAT 57.087 40.909 0.00 0.00 38.96 3.06
3486 4118 4.707030 AACGTGACTTCATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
3487 4119 3.587797 AACGTGACTTCATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
3488 4120 4.921470 AAAACGTGACTTCATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
3489 4121 6.963049 ACTAAAACGTGACTTCATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
3490 4122 8.684973 ACTACTAAAACGTGACTTCATACATC 57.315 34.615 0.00 0.00 0.00 3.06
3491 4123 9.784680 CTACTACTAAAACGTGACTTCATACAT 57.215 33.333 0.00 0.00 0.00 2.29
3492 4124 8.239314 CCTACTACTAAAACGTGACTTCATACA 58.761 37.037 0.00 0.00 0.00 2.29
3493 4125 8.239998 ACCTACTACTAAAACGTGACTTCATAC 58.760 37.037 0.00 0.00 0.00 2.39
3494 4126 8.340618 ACCTACTACTAAAACGTGACTTCATA 57.659 34.615 0.00 0.00 0.00 2.15
3495 4127 7.224522 ACCTACTACTAAAACGTGACTTCAT 57.775 36.000 0.00 0.00 0.00 2.57
3496 4128 6.639632 ACCTACTACTAAAACGTGACTTCA 57.360 37.500 0.00 0.00 0.00 3.02
3497 4129 7.584987 TGTACCTACTACTAAAACGTGACTTC 58.415 38.462 0.00 0.00 0.00 3.01
3498 4130 7.510549 TGTACCTACTACTAAAACGTGACTT 57.489 36.000 0.00 0.00 0.00 3.01
3499 4131 7.148171 GGATGTACCTACTACTAAAACGTGACT 60.148 40.741 0.00 0.00 35.41 3.41
3500 4132 6.969473 GGATGTACCTACTACTAAAACGTGAC 59.031 42.308 0.00 0.00 35.41 3.67
3501 4133 6.183360 CGGATGTACCTACTACTAAAACGTGA 60.183 42.308 0.00 0.00 36.31 4.35
3502 4134 5.967674 CGGATGTACCTACTACTAAAACGTG 59.032 44.000 0.00 0.00 36.31 4.49
3503 4135 5.648092 ACGGATGTACCTACTACTAAAACGT 59.352 40.000 0.00 0.00 36.31 3.99
3504 4136 6.124088 ACGGATGTACCTACTACTAAAACG 57.876 41.667 0.00 0.00 36.31 3.60
3505 4137 9.061435 AGATACGGATGTACCTACTACTAAAAC 57.939 37.037 0.00 0.00 36.31 2.43
3509 4141 9.712305 GTTTAGATACGGATGTACCTACTACTA 57.288 37.037 0.00 0.00 36.31 1.82
3510 4142 8.213679 TGTTTAGATACGGATGTACCTACTACT 58.786 37.037 0.00 0.00 36.31 2.57
3511 4143 8.383318 TGTTTAGATACGGATGTACCTACTAC 57.617 38.462 0.00 0.00 36.31 2.73
3512 4144 8.978874 TTGTTTAGATACGGATGTACCTACTA 57.021 34.615 0.00 0.00 36.31 1.82
3513 4145 7.886629 TTGTTTAGATACGGATGTACCTACT 57.113 36.000 0.00 0.00 36.31 2.57
3514 4146 8.975439 CATTTGTTTAGATACGGATGTACCTAC 58.025 37.037 0.00 0.00 36.31 3.18
3515 4147 8.698210 ACATTTGTTTAGATACGGATGTACCTA 58.302 33.333 0.00 0.00 36.31 3.08
3516 4148 7.562135 ACATTTGTTTAGATACGGATGTACCT 58.438 34.615 0.00 0.00 36.31 3.08
3517 4149 7.781548 ACATTTGTTTAGATACGGATGTACC 57.218 36.000 0.00 0.00 32.26 3.34
3520 4152 9.095065 GTCTTACATTTGTTTAGATACGGATGT 57.905 33.333 0.00 0.00 33.55 3.06
3521 4153 9.093970 TGTCTTACATTTGTTTAGATACGGATG 57.906 33.333 0.00 0.00 0.00 3.51
3522 4154 9.661563 TTGTCTTACATTTGTTTAGATACGGAT 57.338 29.630 0.00 0.00 0.00 4.18
3523 4155 9.146984 CTTGTCTTACATTTGTTTAGATACGGA 57.853 33.333 0.00 0.00 0.00 4.69
3524 4156 9.146984 TCTTGTCTTACATTTGTTTAGATACGG 57.853 33.333 0.00 0.00 0.00 4.02
3532 4164 9.108284 CCCAAAATTCTTGTCTTACATTTGTTT 57.892 29.630 0.00 0.00 27.14 2.83
3533 4165 8.482128 TCCCAAAATTCTTGTCTTACATTTGTT 58.518 29.630 0.00 0.00 27.14 2.83
3534 4166 7.926018 GTCCCAAAATTCTTGTCTTACATTTGT 59.074 33.333 0.00 0.00 27.14 2.83
3535 4167 7.114811 CGTCCCAAAATTCTTGTCTTACATTTG 59.885 37.037 0.00 0.00 0.00 2.32
3536 4168 7.145323 CGTCCCAAAATTCTTGTCTTACATTT 58.855 34.615 0.00 0.00 0.00 2.32
3537 4169 6.294508 CCGTCCCAAAATTCTTGTCTTACATT 60.295 38.462 0.00 0.00 0.00 2.71
3538 4170 5.183140 CCGTCCCAAAATTCTTGTCTTACAT 59.817 40.000 0.00 0.00 0.00 2.29
3539 4171 4.517453 CCGTCCCAAAATTCTTGTCTTACA 59.483 41.667 0.00 0.00 0.00 2.41
3540 4172 4.082949 CCCGTCCCAAAATTCTTGTCTTAC 60.083 45.833 0.00 0.00 0.00 2.34
3541 4173 4.076394 CCCGTCCCAAAATTCTTGTCTTA 58.924 43.478 0.00 0.00 0.00 2.10
3542 4174 2.890945 CCCGTCCCAAAATTCTTGTCTT 59.109 45.455 0.00 0.00 0.00 3.01
3543 4175 2.514803 CCCGTCCCAAAATTCTTGTCT 58.485 47.619 0.00 0.00 0.00 3.41
3544 4176 1.544246 CCCCGTCCCAAAATTCTTGTC 59.456 52.381 0.00 0.00 0.00 3.18
3545 4177 1.627864 CCCCGTCCCAAAATTCTTGT 58.372 50.000 0.00 0.00 0.00 3.16
3546 4178 0.894835 CCCCCGTCCCAAAATTCTTG 59.105 55.000 0.00 0.00 0.00 3.02
3547 4179 3.374318 CCCCCGTCCCAAAATTCTT 57.626 52.632 0.00 0.00 0.00 2.52
3562 4194 1.074889 TGCCAAAAGAAGTACTCCCCC 59.925 52.381 0.00 0.00 0.00 5.40
3563 4195 2.224793 ACTGCCAAAAGAAGTACTCCCC 60.225 50.000 0.00 0.00 29.65 4.81
3564 4196 3.141767 ACTGCCAAAAGAAGTACTCCC 57.858 47.619 0.00 0.00 29.65 4.30
3565 4197 4.822350 AGAAACTGCCAAAAGAAGTACTCC 59.178 41.667 0.00 0.00 30.49 3.85
3566 4198 7.492352 TTAGAAACTGCCAAAAGAAGTACTC 57.508 36.000 0.00 0.00 30.49 2.59
3567 4199 7.875327 TTTAGAAACTGCCAAAAGAAGTACT 57.125 32.000 0.00 0.00 30.49 2.73
3570 4202 9.529325 GTTATTTTAGAAACTGCCAAAAGAAGT 57.471 29.630 0.00 0.00 34.90 3.01
3602 4240 3.665675 ATTGGGACTCGTGAGCGGC 62.666 63.158 0.00 0.00 38.89 6.53
3603 4241 1.811266 CATTGGGACTCGTGAGCGG 60.811 63.158 0.00 0.00 38.89 5.52
3605 4243 2.029838 ATTCATTGGGACTCGTGAGC 57.970 50.000 0.00 0.00 0.00 4.26
3608 4246 4.040461 ACCCTATATTCATTGGGACTCGTG 59.960 45.833 10.55 0.00 46.87 4.35
3609 4247 4.232091 ACCCTATATTCATTGGGACTCGT 58.768 43.478 10.55 0.00 46.87 4.18
3611 4249 5.799213 CTGACCCTATATTCATTGGGACTC 58.201 45.833 10.55 0.82 46.87 3.36
3614 4280 4.242811 AGCTGACCCTATATTCATTGGGA 58.757 43.478 10.55 0.00 46.87 4.37
3627 4293 6.434340 CCAAACTTATTTTAGAAGCTGACCCT 59.566 38.462 0.00 0.00 0.00 4.34
3631 4297 7.176690 CCCTTCCAAACTTATTTTAGAAGCTGA 59.823 37.037 0.00 0.00 35.81 4.26
3633 4299 6.437477 CCCCTTCCAAACTTATTTTAGAAGCT 59.563 38.462 0.00 0.00 35.81 3.74
3650 4316 2.265467 GACATAAGCCGCCCCTTCCA 62.265 60.000 0.00 0.00 0.00 3.53
3668 4335 3.919804 CCGGTTATTTTGACGACTTACGA 59.080 43.478 0.00 0.00 45.77 3.43
3671 4338 3.928375 GCTCCGGTTATTTTGACGACTTA 59.072 43.478 0.00 0.00 0.00 2.24
3672 4339 2.740447 GCTCCGGTTATTTTGACGACTT 59.260 45.455 0.00 0.00 0.00 3.01
3680 4347 4.659115 ACTGTTTAGGCTCCGGTTATTTT 58.341 39.130 0.00 0.00 0.00 1.82
3684 4351 3.775261 AAACTGTTTAGGCTCCGGTTA 57.225 42.857 3.51 0.00 0.00 2.85
3688 4355 6.496338 AAAAGATAAACTGTTTAGGCTCCG 57.504 37.500 17.05 0.00 0.00 4.63
3715 4382 4.986054 TCATGTTAAACCACTGTAGGGT 57.014 40.909 0.00 0.00 41.41 4.34
3814 4482 9.635404 AGAAACCCATATACGGATGAAATTTTA 57.365 29.630 0.00 0.00 0.00 1.52
3816 4484 8.533569 AAGAAACCCATATACGGATGAAATTT 57.466 30.769 0.00 0.00 0.00 1.82
3817 4485 9.635404 TTAAGAAACCCATATACGGATGAAATT 57.365 29.630 0.00 0.00 0.00 1.82
3818 4486 9.635404 TTTAAGAAACCCATATACGGATGAAAT 57.365 29.630 0.00 0.00 0.00 2.17
3857 4525 9.685276 TCTGAAATTCCATACATTGTGAACTAT 57.315 29.630 0.00 0.00 0.00 2.12
3889 4557 5.464965 TTTTCTCGAGAAACACAGTGAAC 57.535 39.130 34.29 0.00 43.01 3.18
3926 4594 5.308825 GCCCATCAACACTATTAGCAGTAT 58.691 41.667 0.00 0.00 0.00 2.12
3930 4598 2.744823 CGGCCCATCAACACTATTAGCA 60.745 50.000 0.00 0.00 0.00 3.49
3932 4600 3.469008 TCGGCCCATCAACACTATTAG 57.531 47.619 0.00 0.00 0.00 1.73
3943 4611 1.886542 GGGACATTAATTCGGCCCATC 59.113 52.381 11.17 0.00 35.63 3.51
4030 4699 9.566432 ACACTTCAGAGTTTCATATCTTTTCTT 57.434 29.630 0.00 0.00 32.54 2.52
4031 4700 9.566432 AACACTTCAGAGTTTCATATCTTTTCT 57.434 29.630 0.00 0.00 32.54 2.52
4033 4702 9.956720 CAAACACTTCAGAGTTTCATATCTTTT 57.043 29.630 0.00 0.00 36.86 2.27
4034 4703 8.571336 CCAAACACTTCAGAGTTTCATATCTTT 58.429 33.333 0.00 0.00 36.86 2.52
4035 4704 7.721399 ACCAAACACTTCAGAGTTTCATATCTT 59.279 33.333 0.00 0.00 36.86 2.40
4036 4705 7.227156 ACCAAACACTTCAGAGTTTCATATCT 58.773 34.615 0.00 0.00 36.86 1.98
4037 4706 7.440523 ACCAAACACTTCAGAGTTTCATATC 57.559 36.000 0.00 0.00 36.86 1.63
4038 4707 7.307989 CGAACCAAACACTTCAGAGTTTCATAT 60.308 37.037 0.00 0.00 36.86 1.78
4039 4708 6.018262 CGAACCAAACACTTCAGAGTTTCATA 60.018 38.462 0.00 0.00 36.86 2.15
4040 4709 5.220854 CGAACCAAACACTTCAGAGTTTCAT 60.221 40.000 0.00 0.00 36.86 2.57
4041 4710 4.094294 CGAACCAAACACTTCAGAGTTTCA 59.906 41.667 0.00 0.00 36.86 2.69
4042 4711 4.495844 CCGAACCAAACACTTCAGAGTTTC 60.496 45.833 0.00 0.00 36.86 2.78
4043 4712 3.377172 CCGAACCAAACACTTCAGAGTTT 59.623 43.478 0.00 0.00 38.92 2.66
4044 4713 2.943033 CCGAACCAAACACTTCAGAGTT 59.057 45.455 0.00 0.00 32.54 3.01
4045 4714 2.561569 CCGAACCAAACACTTCAGAGT 58.438 47.619 0.00 0.00 36.25 3.24
4046 4715 1.264288 GCCGAACCAAACACTTCAGAG 59.736 52.381 0.00 0.00 0.00 3.35
4047 4716 1.305201 GCCGAACCAAACACTTCAGA 58.695 50.000 0.00 0.00 0.00 3.27
4048 4717 1.021202 TGCCGAACCAAACACTTCAG 58.979 50.000 0.00 0.00 0.00 3.02
4049 4718 1.133407 GTTGCCGAACCAAACACTTCA 59.867 47.619 0.00 0.00 0.00 3.02
4050 4719 1.835121 GTTGCCGAACCAAACACTTC 58.165 50.000 0.00 0.00 0.00 3.01
4051 4720 0.099791 CGTTGCCGAACCAAACACTT 59.900 50.000 0.00 0.00 35.63 3.16
4052 4721 1.027792 ACGTTGCCGAACCAAACACT 61.028 50.000 0.00 0.00 37.88 3.55
4186 4873 7.337942 GGTCCTTTCTTTGATCAAGTCACATAT 59.662 37.037 8.41 0.00 36.32 1.78
4188 4875 5.474876 GGTCCTTTCTTTGATCAAGTCACAT 59.525 40.000 8.41 0.00 36.32 3.21
4189 4876 4.821805 GGTCCTTTCTTTGATCAAGTCACA 59.178 41.667 8.41 0.00 36.32 3.58
4223 4910 2.027653 CCACAGGAGGAAGAGAAAGTCC 60.028 54.545 0.00 0.00 0.00 3.85
4227 4914 0.321671 CGCCACAGGAGGAAGAGAAA 59.678 55.000 0.00 0.00 0.00 2.52
4258 4945 2.041922 CCATCGGAGGTGGGGAGA 60.042 66.667 0.00 0.00 32.98 3.71
4287 4974 1.000993 AGGTCCTCCGCATCTCTGT 59.999 57.895 0.00 0.00 39.05 3.41
4293 4980 3.474570 GGCTGAGGTCCTCCGCAT 61.475 66.667 29.70 0.00 41.37 4.73
4322 5009 0.179097 GAACGAGAGCATGGTCCCTC 60.179 60.000 20.92 12.07 0.00 4.30
4323 5010 0.616111 AGAACGAGAGCATGGTCCCT 60.616 55.000 20.92 3.66 0.00 4.20
4324 5011 0.250513 AAGAACGAGAGCATGGTCCC 59.749 55.000 20.92 8.94 0.00 4.46
4325 5012 2.961526 TAAGAACGAGAGCATGGTCC 57.038 50.000 20.92 11.58 0.00 4.46
4326 5013 4.985409 CCTAATAAGAACGAGAGCATGGTC 59.015 45.833 17.19 17.19 0.00 4.02
4327 5014 4.406003 ACCTAATAAGAACGAGAGCATGGT 59.594 41.667 0.00 0.00 0.00 3.55
4328 5015 4.950050 ACCTAATAAGAACGAGAGCATGG 58.050 43.478 0.00 0.00 0.00 3.66
4329 5016 7.598278 AGATACCTAATAAGAACGAGAGCATG 58.402 38.462 0.00 0.00 0.00 4.06
4330 5017 7.768807 AGATACCTAATAAGAACGAGAGCAT 57.231 36.000 0.00 0.00 0.00 3.79
4331 5018 7.426410 CAAGATACCTAATAAGAACGAGAGCA 58.574 38.462 0.00 0.00 0.00 4.26
4332 5019 6.864165 CCAAGATACCTAATAAGAACGAGAGC 59.136 42.308 0.00 0.00 0.00 4.09
4333 5020 7.942990 ACCAAGATACCTAATAAGAACGAGAG 58.057 38.462 0.00 0.00 0.00 3.20
4334 5021 7.893124 ACCAAGATACCTAATAAGAACGAGA 57.107 36.000 0.00 0.00 0.00 4.04
4335 5022 7.438459 CCAACCAAGATACCTAATAAGAACGAG 59.562 40.741 0.00 0.00 0.00 4.18
4336 5023 7.270047 CCAACCAAGATACCTAATAAGAACGA 58.730 38.462 0.00 0.00 0.00 3.85
4337 5024 6.482308 CCCAACCAAGATACCTAATAAGAACG 59.518 42.308 0.00 0.00 0.00 3.95
4338 5025 6.771267 CCCCAACCAAGATACCTAATAAGAAC 59.229 42.308 0.00 0.00 0.00 3.01
4339 5026 6.449041 ACCCCAACCAAGATACCTAATAAGAA 59.551 38.462 0.00 0.00 0.00 2.52
4340 5027 5.974370 ACCCCAACCAAGATACCTAATAAGA 59.026 40.000 0.00 0.00 0.00 2.10
4341 5028 6.262056 ACCCCAACCAAGATACCTAATAAG 57.738 41.667 0.00 0.00 0.00 1.73
4342 5029 6.428295 CAACCCCAACCAAGATACCTAATAA 58.572 40.000 0.00 0.00 0.00 1.40
4343 5030 5.632902 GCAACCCCAACCAAGATACCTAATA 60.633 44.000 0.00 0.00 0.00 0.98
4344 5031 4.867086 CAACCCCAACCAAGATACCTAAT 58.133 43.478 0.00 0.00 0.00 1.73
4345 5032 3.562609 GCAACCCCAACCAAGATACCTAA 60.563 47.826 0.00 0.00 0.00 2.69
4346 5033 2.025699 GCAACCCCAACCAAGATACCTA 60.026 50.000 0.00 0.00 0.00 3.08
4347 5034 1.272480 GCAACCCCAACCAAGATACCT 60.272 52.381 0.00 0.00 0.00 3.08
4348 5035 1.182667 GCAACCCCAACCAAGATACC 58.817 55.000 0.00 0.00 0.00 2.73
4349 5036 0.808755 CGCAACCCCAACCAAGATAC 59.191 55.000 0.00 0.00 0.00 2.24
4350 5037 0.963355 GCGCAACCCCAACCAAGATA 60.963 55.000 0.30 0.00 0.00 1.98
4351 5038 2.275380 GCGCAACCCCAACCAAGAT 61.275 57.895 0.30 0.00 0.00 2.40
4352 5039 2.909965 GCGCAACCCCAACCAAGA 60.910 61.111 0.30 0.00 0.00 3.02
4353 5040 3.211564 CTGCGCAACCCCAACCAAG 62.212 63.158 13.05 0.00 0.00 3.61
4354 5041 3.222855 CTGCGCAACCCCAACCAA 61.223 61.111 13.05 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.