Multiple sequence alignment - TraesCS6B01G207200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G207200 chr6B 100.000 2472 0 0 859 3330 261584095 261586566 0.000000e+00 4566.0
1 TraesCS6B01G207200 chr6B 100.000 575 0 0 1 575 261583237 261583811 0.000000e+00 1062.0
2 TraesCS6B01G207200 chr6D 92.184 2495 110 29 859 3330 148797103 148799535 0.000000e+00 3448.0
3 TraesCS6B01G207200 chr6A 91.879 1650 61 20 859 2501 198180330 198178747 0.000000e+00 2237.0
4 TraesCS6B01G207200 chr6A 89.302 430 42 3 2891 3320 198168725 198168300 1.360000e-148 536.0
5 TraesCS6B01G207200 chr6A 89.674 184 7 6 363 535 198180658 198180476 1.200000e-54 224.0
6 TraesCS6B01G207200 chr3D 82.796 93 10 6 2205 2294 405372251 405372162 9.910000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G207200 chr6B 261583237 261586566 3329 False 2814.0 4566 100.0000 1 3330 2 chr6B.!!$F1 3329
1 TraesCS6B01G207200 chr6D 148797103 148799535 2432 False 3448.0 3448 92.1840 859 3330 1 chr6D.!!$F1 2471
2 TraesCS6B01G207200 chr6A 198178747 198180658 1911 True 1230.5 2237 90.7765 363 2501 2 chr6A.!!$R2 2138

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
190 191 0.028902 GTGAAAACCGCTGGTGTCAC 59.971 55.0 19.27 19.27 41.23 3.67 F
899 911 0.103937 GCTAGAGCTAGGCCACACTG 59.896 60.0 5.01 0.00 38.21 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1822 1851 0.104672 TGGTCCCGGGGATGATGTAT 60.105 55.0 23.5 0.0 32.73 2.29 R
2770 2816 0.108615 CTAGTGGTGAGCAGGAACCG 60.109 60.0 0.0 0.0 39.47 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.639113 TTTCTTGAAAGAGAGCTTAAAACCA 57.361 32.000 0.00 0.00 36.22 3.67
33 34 6.867662 TCTTGAAAGAGAGCTTAAAACCAG 57.132 37.500 0.00 0.00 32.98 4.00
34 35 6.591935 TCTTGAAAGAGAGCTTAAAACCAGA 58.408 36.000 0.00 0.00 32.98 3.86
35 36 6.483640 TCTTGAAAGAGAGCTTAAAACCAGAC 59.516 38.462 0.00 0.00 32.98 3.51
36 37 5.680619 TGAAAGAGAGCTTAAAACCAGACA 58.319 37.500 0.00 0.00 32.98 3.41
37 38 5.760253 TGAAAGAGAGCTTAAAACCAGACAG 59.240 40.000 0.00 0.00 32.98 3.51
38 39 5.552870 AAGAGAGCTTAAAACCAGACAGA 57.447 39.130 0.00 0.00 31.07 3.41
39 40 5.753721 AGAGAGCTTAAAACCAGACAGAT 57.246 39.130 0.00 0.00 0.00 2.90
40 41 5.486526 AGAGAGCTTAAAACCAGACAGATG 58.513 41.667 0.00 0.00 0.00 2.90
41 42 5.247110 AGAGAGCTTAAAACCAGACAGATGA 59.753 40.000 0.00 0.00 0.00 2.92
42 43 5.241662 AGAGCTTAAAACCAGACAGATGAC 58.758 41.667 0.00 0.00 0.00 3.06
43 44 5.012561 AGAGCTTAAAACCAGACAGATGACT 59.987 40.000 0.00 0.00 0.00 3.41
44 45 6.211584 AGAGCTTAAAACCAGACAGATGACTA 59.788 38.462 0.00 0.00 0.00 2.59
45 46 6.166982 AGCTTAAAACCAGACAGATGACTAC 58.833 40.000 0.00 0.00 0.00 2.73
46 47 6.014156 AGCTTAAAACCAGACAGATGACTACT 60.014 38.462 0.00 0.00 0.00 2.57
47 48 6.651225 GCTTAAAACCAGACAGATGACTACTT 59.349 38.462 0.00 0.00 0.00 2.24
48 49 7.173390 GCTTAAAACCAGACAGATGACTACTTT 59.827 37.037 0.00 0.00 0.00 2.66
49 50 8.974060 TTAAAACCAGACAGATGACTACTTTT 57.026 30.769 0.00 0.00 0.00 2.27
50 51 7.881775 AAAACCAGACAGATGACTACTTTTT 57.118 32.000 0.00 0.00 0.00 1.94
51 52 8.974060 AAAACCAGACAGATGACTACTTTTTA 57.026 30.769 0.00 0.00 0.00 1.52
52 53 7.964604 AACCAGACAGATGACTACTTTTTAC 57.035 36.000 0.00 0.00 0.00 2.01
53 54 7.062749 ACCAGACAGATGACTACTTTTTACA 57.937 36.000 0.00 0.00 0.00 2.41
54 55 7.680730 ACCAGACAGATGACTACTTTTTACAT 58.319 34.615 0.00 0.00 0.00 2.29
55 56 8.812972 ACCAGACAGATGACTACTTTTTACATA 58.187 33.333 0.00 0.00 0.00 2.29
56 57 9.088512 CCAGACAGATGACTACTTTTTACATAC 57.911 37.037 0.00 0.00 0.00 2.39
57 58 9.639601 CAGACAGATGACTACTTTTTACATACA 57.360 33.333 0.00 0.00 0.00 2.29
60 61 9.998106 ACAGATGACTACTTTTTACATACAAGT 57.002 29.630 0.00 0.00 35.00 3.16
62 63 9.998106 AGATGACTACTTTTTACATACAAGTGT 57.002 29.630 0.00 0.00 32.88 3.55
76 77 8.732746 ACATACAAGTGTATTATTGGTTCCTC 57.267 34.615 1.09 0.00 39.06 3.71
77 78 8.325787 ACATACAAGTGTATTATTGGTTCCTCA 58.674 33.333 1.09 0.00 39.06 3.86
78 79 9.173021 CATACAAGTGTATTATTGGTTCCTCAA 57.827 33.333 1.09 0.00 39.06 3.02
79 80 7.687941 ACAAGTGTATTATTGGTTCCTCAAG 57.312 36.000 0.00 0.00 0.00 3.02
80 81 7.231467 ACAAGTGTATTATTGGTTCCTCAAGT 58.769 34.615 0.00 0.00 0.00 3.16
81 82 7.724061 ACAAGTGTATTATTGGTTCCTCAAGTT 59.276 33.333 0.00 0.00 0.00 2.66
82 83 9.226606 CAAGTGTATTATTGGTTCCTCAAGTTA 57.773 33.333 0.00 0.00 0.00 2.24
83 84 8.788325 AGTGTATTATTGGTTCCTCAAGTTAC 57.212 34.615 0.00 0.00 0.00 2.50
84 85 8.380099 AGTGTATTATTGGTTCCTCAAGTTACA 58.620 33.333 0.00 0.00 0.00 2.41
85 86 9.005777 GTGTATTATTGGTTCCTCAAGTTACAA 57.994 33.333 0.00 0.00 0.00 2.41
86 87 9.226606 TGTATTATTGGTTCCTCAAGTTACAAG 57.773 33.333 0.00 0.00 0.00 3.16
87 88 9.444600 GTATTATTGGTTCCTCAAGTTACAAGA 57.555 33.333 0.00 0.00 0.00 3.02
88 89 8.934023 ATTATTGGTTCCTCAAGTTACAAGAA 57.066 30.769 0.00 0.00 0.00 2.52
89 90 6.884280 ATTGGTTCCTCAAGTTACAAGAAG 57.116 37.500 0.00 0.00 0.00 2.85
90 91 5.367945 TGGTTCCTCAAGTTACAAGAAGT 57.632 39.130 0.00 0.00 0.00 3.01
91 92 5.365619 TGGTTCCTCAAGTTACAAGAAGTC 58.634 41.667 0.00 0.00 0.00 3.01
92 93 5.130477 TGGTTCCTCAAGTTACAAGAAGTCT 59.870 40.000 0.00 0.00 0.00 3.24
93 94 6.056236 GGTTCCTCAAGTTACAAGAAGTCTT 58.944 40.000 0.00 0.00 36.45 3.01
94 95 7.147620 TGGTTCCTCAAGTTACAAGAAGTCTTA 60.148 37.037 0.00 0.00 34.28 2.10
95 96 7.171167 GGTTCCTCAAGTTACAAGAAGTCTTAC 59.829 40.741 0.00 0.00 34.28 2.34
96 97 6.756221 TCCTCAAGTTACAAGAAGTCTTACC 58.244 40.000 0.00 0.00 34.28 2.85
97 98 6.553852 TCCTCAAGTTACAAGAAGTCTTACCT 59.446 38.462 0.00 0.00 34.28 3.08
98 99 6.869388 CCTCAAGTTACAAGAAGTCTTACCTC 59.131 42.308 0.00 0.00 34.28 3.85
99 100 7.356089 TCAAGTTACAAGAAGTCTTACCTCA 57.644 36.000 0.00 0.00 34.28 3.86
100 101 7.963532 TCAAGTTACAAGAAGTCTTACCTCAT 58.036 34.615 0.00 0.00 34.28 2.90
101 102 8.088981 TCAAGTTACAAGAAGTCTTACCTCATC 58.911 37.037 0.00 0.00 34.28 2.92
102 103 7.784470 AGTTACAAGAAGTCTTACCTCATCT 57.216 36.000 0.00 0.00 34.28 2.90
103 104 8.196378 AGTTACAAGAAGTCTTACCTCATCTT 57.804 34.615 0.00 0.00 34.28 2.40
104 105 8.652290 AGTTACAAGAAGTCTTACCTCATCTTT 58.348 33.333 0.00 0.00 34.28 2.52
105 106 9.274206 GTTACAAGAAGTCTTACCTCATCTTTT 57.726 33.333 0.00 0.00 34.28 2.27
106 107 9.847224 TTACAAGAAGTCTTACCTCATCTTTTT 57.153 29.630 0.00 0.00 34.28 1.94
107 108 8.384607 ACAAGAAGTCTTACCTCATCTTTTTC 57.615 34.615 0.00 0.00 34.28 2.29
108 109 8.214364 ACAAGAAGTCTTACCTCATCTTTTTCT 58.786 33.333 0.00 0.00 34.28 2.52
109 110 9.061435 CAAGAAGTCTTACCTCATCTTTTTCTT 57.939 33.333 0.00 0.00 34.28 2.52
111 112 9.936759 AGAAGTCTTACCTCATCTTTTTCTTAG 57.063 33.333 0.00 0.00 0.00 2.18
112 113 9.930693 GAAGTCTTACCTCATCTTTTTCTTAGA 57.069 33.333 0.00 0.00 0.00 2.10
114 115 9.936759 AGTCTTACCTCATCTTTTTCTTAGAAG 57.063 33.333 0.00 0.00 0.00 2.85
115 116 8.661257 GTCTTACCTCATCTTTTTCTTAGAAGC 58.339 37.037 0.00 0.00 0.00 3.86
116 117 7.824779 TCTTACCTCATCTTTTTCTTAGAAGCC 59.175 37.037 0.00 0.00 0.00 4.35
117 118 5.880901 ACCTCATCTTTTTCTTAGAAGCCA 58.119 37.500 0.00 0.00 0.00 4.75
118 119 6.488715 ACCTCATCTTTTTCTTAGAAGCCAT 58.511 36.000 0.00 0.00 0.00 4.40
119 120 6.950619 ACCTCATCTTTTTCTTAGAAGCCATT 59.049 34.615 0.00 0.00 0.00 3.16
120 121 7.452813 ACCTCATCTTTTTCTTAGAAGCCATTT 59.547 33.333 0.00 0.00 0.00 2.32
121 122 8.309656 CCTCATCTTTTTCTTAGAAGCCATTTT 58.690 33.333 0.00 0.00 0.00 1.82
125 126 9.929180 ATCTTTTTCTTAGAAGCCATTTTAACC 57.071 29.630 0.00 0.00 0.00 2.85
126 127 8.364894 TCTTTTTCTTAGAAGCCATTTTAACCC 58.635 33.333 0.00 0.00 0.00 4.11
127 128 7.849322 TTTTCTTAGAAGCCATTTTAACCCT 57.151 32.000 0.00 0.00 0.00 4.34
128 129 7.462571 TTTCTTAGAAGCCATTTTAACCCTC 57.537 36.000 0.00 0.00 0.00 4.30
129 130 5.183228 TCTTAGAAGCCATTTTAACCCTCG 58.817 41.667 0.00 0.00 0.00 4.63
130 131 3.434940 AGAAGCCATTTTAACCCTCGT 57.565 42.857 0.00 0.00 0.00 4.18
131 132 3.081804 AGAAGCCATTTTAACCCTCGTG 58.918 45.455 0.00 0.00 0.00 4.35
132 133 2.579410 AGCCATTTTAACCCTCGTGT 57.421 45.000 0.00 0.00 0.00 4.49
133 134 2.871453 AGCCATTTTAACCCTCGTGTT 58.129 42.857 0.00 0.00 0.00 3.32
134 135 3.227614 AGCCATTTTAACCCTCGTGTTT 58.772 40.909 0.00 0.00 0.00 2.83
135 136 3.639561 AGCCATTTTAACCCTCGTGTTTT 59.360 39.130 0.00 0.00 0.00 2.43
136 137 4.828387 AGCCATTTTAACCCTCGTGTTTTA 59.172 37.500 0.00 0.00 0.00 1.52
137 138 5.048294 AGCCATTTTAACCCTCGTGTTTTAG 60.048 40.000 0.00 0.00 0.00 1.85
138 139 5.705902 CCATTTTAACCCTCGTGTTTTAGG 58.294 41.667 0.00 0.00 0.00 2.69
139 140 5.474189 CCATTTTAACCCTCGTGTTTTAGGA 59.526 40.000 0.00 0.00 34.58 2.94
140 141 6.376177 CATTTTAACCCTCGTGTTTTAGGAC 58.624 40.000 0.00 0.00 34.58 3.85
141 142 2.556144 AACCCTCGTGTTTTAGGACC 57.444 50.000 0.00 0.00 34.58 4.46
142 143 1.426751 ACCCTCGTGTTTTAGGACCA 58.573 50.000 0.00 0.00 34.58 4.02
143 144 1.346722 ACCCTCGTGTTTTAGGACCAG 59.653 52.381 0.00 0.00 34.58 4.00
144 145 1.621814 CCCTCGTGTTTTAGGACCAGA 59.378 52.381 0.00 0.00 34.58 3.86
145 146 2.612221 CCCTCGTGTTTTAGGACCAGAC 60.612 54.545 0.00 0.00 34.58 3.51
146 147 2.325761 CTCGTGTTTTAGGACCAGACG 58.674 52.381 0.00 0.00 0.00 4.18
147 148 1.682854 TCGTGTTTTAGGACCAGACGT 59.317 47.619 0.00 0.00 0.00 4.34
148 149 2.884012 TCGTGTTTTAGGACCAGACGTA 59.116 45.455 0.00 0.00 0.00 3.57
149 150 3.507233 TCGTGTTTTAGGACCAGACGTAT 59.493 43.478 0.00 0.00 0.00 3.06
150 151 4.022068 TCGTGTTTTAGGACCAGACGTATT 60.022 41.667 0.00 0.00 0.00 1.89
151 152 4.687483 CGTGTTTTAGGACCAGACGTATTT 59.313 41.667 0.00 0.00 0.00 1.40
152 153 5.164022 CGTGTTTTAGGACCAGACGTATTTC 60.164 44.000 0.00 0.00 0.00 2.17
153 154 5.930569 GTGTTTTAGGACCAGACGTATTTCT 59.069 40.000 0.00 0.00 0.00 2.52
154 155 6.090493 GTGTTTTAGGACCAGACGTATTTCTC 59.910 42.308 0.00 0.00 0.00 2.87
155 156 4.996788 TTAGGACCAGACGTATTTCTCC 57.003 45.455 0.00 0.00 0.00 3.71
156 157 2.816411 AGGACCAGACGTATTTCTCCA 58.184 47.619 0.00 0.00 0.00 3.86
157 158 3.170717 AGGACCAGACGTATTTCTCCAA 58.829 45.455 0.00 0.00 0.00 3.53
158 159 3.581332 AGGACCAGACGTATTTCTCCAAA 59.419 43.478 0.00 0.00 0.00 3.28
159 160 4.041198 AGGACCAGACGTATTTCTCCAAAA 59.959 41.667 0.00 0.00 0.00 2.44
160 161 4.941873 GGACCAGACGTATTTCTCCAAAAT 59.058 41.667 0.00 0.00 0.00 1.82
161 162 5.414765 GGACCAGACGTATTTCTCCAAAATT 59.585 40.000 0.00 0.00 0.00 1.82
162 163 6.596497 GGACCAGACGTATTTCTCCAAAATTA 59.404 38.462 0.00 0.00 0.00 1.40
163 164 7.120138 GGACCAGACGTATTTCTCCAAAATTAA 59.880 37.037 0.00 0.00 0.00 1.40
164 165 8.398878 ACCAGACGTATTTCTCCAAAATTAAA 57.601 30.769 0.00 0.00 0.00 1.52
165 166 8.852135 ACCAGACGTATTTCTCCAAAATTAAAA 58.148 29.630 0.00 0.00 0.00 1.52
166 167 9.685828 CCAGACGTATTTCTCCAAAATTAAAAA 57.314 29.630 0.00 0.00 0.00 1.94
179 180 9.114952 TCCAAAATTAAAAATGAGGTGAAAACC 57.885 29.630 0.00 0.00 0.00 3.27
180 181 8.067189 CCAAAATTAAAAATGAGGTGAAAACCG 58.933 33.333 0.00 0.00 34.28 4.44
181 182 6.779115 AATTAAAAATGAGGTGAAAACCGC 57.221 33.333 0.00 0.00 34.28 5.68
182 183 5.523438 TTAAAAATGAGGTGAAAACCGCT 57.477 34.783 0.41 0.00 34.28 5.52
183 184 3.369546 AAAATGAGGTGAAAACCGCTG 57.630 42.857 0.41 0.00 34.28 5.18
184 185 1.247567 AATGAGGTGAAAACCGCTGG 58.752 50.000 0.41 0.00 34.28 4.85
185 186 0.110486 ATGAGGTGAAAACCGCTGGT 59.890 50.000 0.41 0.00 37.65 4.00
186 187 0.817634 TGAGGTGAAAACCGCTGGTG 60.818 55.000 0.94 0.00 35.34 4.17
187 188 0.818040 GAGGTGAAAACCGCTGGTGT 60.818 55.000 0.94 0.00 35.34 4.16
188 189 0.818040 AGGTGAAAACCGCTGGTGTC 60.818 55.000 0.94 3.60 35.34 3.67
189 190 1.098712 GGTGAAAACCGCTGGTGTCA 61.099 55.000 0.94 5.83 35.34 3.58
190 191 0.028902 GTGAAAACCGCTGGTGTCAC 59.971 55.000 19.27 19.27 41.23 3.67
191 192 0.107410 TGAAAACCGCTGGTGTCACT 60.107 50.000 2.35 0.00 35.34 3.41
192 193 0.307760 GAAAACCGCTGGTGTCACTG 59.692 55.000 2.35 0.00 35.34 3.66
193 194 1.101049 AAAACCGCTGGTGTCACTGG 61.101 55.000 2.35 3.10 35.34 4.00
194 195 2.265467 AAACCGCTGGTGTCACTGGT 62.265 55.000 2.35 3.71 35.34 4.00
195 196 2.111043 CCGCTGGTGTCACTGGTT 59.889 61.111 2.35 0.00 0.00 3.67
196 197 1.525995 CCGCTGGTGTCACTGGTTT 60.526 57.895 2.35 0.00 0.00 3.27
197 198 1.101049 CCGCTGGTGTCACTGGTTTT 61.101 55.000 2.35 0.00 0.00 2.43
198 199 0.307760 CGCTGGTGTCACTGGTTTTC 59.692 55.000 2.35 0.00 0.00 2.29
199 200 0.307760 GCTGGTGTCACTGGTTTTCG 59.692 55.000 2.35 0.00 0.00 3.46
200 201 0.307760 CTGGTGTCACTGGTTTTCGC 59.692 55.000 2.35 0.00 0.00 4.70
201 202 0.107410 TGGTGTCACTGGTTTTCGCT 60.107 50.000 2.35 0.00 0.00 4.93
202 203 1.139256 TGGTGTCACTGGTTTTCGCTA 59.861 47.619 2.35 0.00 0.00 4.26
203 204 2.224426 TGGTGTCACTGGTTTTCGCTAT 60.224 45.455 2.35 0.00 0.00 2.97
204 205 2.159627 GGTGTCACTGGTTTTCGCTATG 59.840 50.000 2.35 0.00 0.00 2.23
205 206 2.806244 GTGTCACTGGTTTTCGCTATGT 59.194 45.455 0.00 0.00 0.00 2.29
206 207 3.064207 TGTCACTGGTTTTCGCTATGTC 58.936 45.455 0.00 0.00 0.00 3.06
207 208 2.415512 GTCACTGGTTTTCGCTATGTCC 59.584 50.000 0.00 0.00 0.00 4.02
208 209 2.301870 TCACTGGTTTTCGCTATGTCCT 59.698 45.455 0.00 0.00 0.00 3.85
209 210 2.673368 CACTGGTTTTCGCTATGTCCTC 59.327 50.000 0.00 0.00 0.00 3.71
210 211 2.301870 ACTGGTTTTCGCTATGTCCTCA 59.698 45.455 0.00 0.00 0.00 3.86
211 212 2.673368 CTGGTTTTCGCTATGTCCTCAC 59.327 50.000 0.00 0.00 0.00 3.51
212 213 2.301870 TGGTTTTCGCTATGTCCTCACT 59.698 45.455 0.00 0.00 0.00 3.41
213 214 3.244422 TGGTTTTCGCTATGTCCTCACTT 60.244 43.478 0.00 0.00 0.00 3.16
214 215 3.125316 GGTTTTCGCTATGTCCTCACTTG 59.875 47.826 0.00 0.00 0.00 3.16
215 216 2.010145 TTCGCTATGTCCTCACTTGC 57.990 50.000 0.00 0.00 0.00 4.01
216 217 0.175760 TCGCTATGTCCTCACTTGCC 59.824 55.000 0.00 0.00 0.00 4.52
217 218 0.108186 CGCTATGTCCTCACTTGCCA 60.108 55.000 0.00 0.00 0.00 4.92
218 219 1.473965 CGCTATGTCCTCACTTGCCAT 60.474 52.381 0.00 0.00 0.00 4.40
219 220 1.945394 GCTATGTCCTCACTTGCCATG 59.055 52.381 0.00 0.00 0.00 3.66
220 221 2.569059 CTATGTCCTCACTTGCCATGG 58.431 52.381 7.63 7.63 0.00 3.66
221 222 0.682209 ATGTCCTCACTTGCCATGGC 60.682 55.000 30.54 30.54 42.35 4.40
222 223 2.046023 TCCTCACTTGCCATGGCG 60.046 61.111 30.87 20.22 45.51 5.69
223 224 2.360350 CCTCACTTGCCATGGCGT 60.360 61.111 30.87 20.92 45.51 5.68
224 225 2.693762 CCTCACTTGCCATGGCGTG 61.694 63.158 28.98 28.98 45.51 5.34
238 239 2.663852 CGTGGTTTCCGCCTCGTT 60.664 61.111 0.00 0.00 39.71 3.85
239 240 2.248835 CGTGGTTTCCGCCTCGTTT 61.249 57.895 0.00 0.00 39.71 3.60
240 241 1.572941 GTGGTTTCCGCCTCGTTTC 59.427 57.895 0.00 0.00 0.00 2.78
241 242 0.883370 GTGGTTTCCGCCTCGTTTCT 60.883 55.000 0.00 0.00 0.00 2.52
242 243 0.179040 TGGTTTCCGCCTCGTTTCTT 60.179 50.000 0.00 0.00 0.00 2.52
243 244 0.237498 GGTTTCCGCCTCGTTTCTTG 59.763 55.000 0.00 0.00 0.00 3.02
244 245 0.942252 GTTTCCGCCTCGTTTCTTGT 59.058 50.000 0.00 0.00 0.00 3.16
245 246 1.332686 GTTTCCGCCTCGTTTCTTGTT 59.667 47.619 0.00 0.00 0.00 2.83
246 247 1.670791 TTCCGCCTCGTTTCTTGTTT 58.329 45.000 0.00 0.00 0.00 2.83
247 248 1.670791 TCCGCCTCGTTTCTTGTTTT 58.329 45.000 0.00 0.00 0.00 2.43
248 249 1.332375 TCCGCCTCGTTTCTTGTTTTG 59.668 47.619 0.00 0.00 0.00 2.44
249 250 1.332375 CCGCCTCGTTTCTTGTTTTGA 59.668 47.619 0.00 0.00 0.00 2.69
250 251 2.372350 CGCCTCGTTTCTTGTTTTGAC 58.628 47.619 0.00 0.00 0.00 3.18
251 252 2.372350 GCCTCGTTTCTTGTTTTGACG 58.628 47.619 0.00 0.00 35.24 4.35
252 253 2.853281 GCCTCGTTTCTTGTTTTGACGG 60.853 50.000 0.00 0.00 34.72 4.79
253 254 2.610374 CCTCGTTTCTTGTTTTGACGGA 59.390 45.455 0.00 0.00 34.72 4.69
254 255 3.064271 CCTCGTTTCTTGTTTTGACGGAA 59.936 43.478 0.00 0.00 34.72 4.30
255 256 4.261031 CCTCGTTTCTTGTTTTGACGGAAT 60.261 41.667 0.00 0.00 34.72 3.01
256 257 4.593157 TCGTTTCTTGTTTTGACGGAATG 58.407 39.130 0.00 0.00 34.72 2.67
257 258 4.095185 TCGTTTCTTGTTTTGACGGAATGT 59.905 37.500 0.00 0.00 34.72 2.71
258 259 4.204168 CGTTTCTTGTTTTGACGGAATGTG 59.796 41.667 0.00 0.00 0.00 3.21
259 260 4.974368 TTCTTGTTTTGACGGAATGTGT 57.026 36.364 0.00 0.00 0.00 3.72
260 261 4.545823 TCTTGTTTTGACGGAATGTGTC 57.454 40.909 0.00 0.00 36.88 3.67
261 262 4.196193 TCTTGTTTTGACGGAATGTGTCT 58.804 39.130 0.00 0.00 37.26 3.41
262 263 3.961477 TGTTTTGACGGAATGTGTCTG 57.039 42.857 0.00 0.00 37.26 3.51
263 264 3.536570 TGTTTTGACGGAATGTGTCTGA 58.463 40.909 0.00 0.00 37.26 3.27
264 265 3.311322 TGTTTTGACGGAATGTGTCTGAC 59.689 43.478 0.00 0.00 37.26 3.51
265 266 3.469008 TTTGACGGAATGTGTCTGACT 57.531 42.857 9.51 0.00 37.26 3.41
266 267 3.469008 TTGACGGAATGTGTCTGACTT 57.531 42.857 9.51 0.00 37.26 3.01
267 268 3.469008 TGACGGAATGTGTCTGACTTT 57.531 42.857 9.51 0.50 37.26 2.66
268 269 3.130633 TGACGGAATGTGTCTGACTTTG 58.869 45.455 9.51 0.00 37.26 2.77
269 270 3.181470 TGACGGAATGTGTCTGACTTTGA 60.181 43.478 9.51 0.00 37.26 2.69
270 271 3.131396 ACGGAATGTGTCTGACTTTGAC 58.869 45.455 9.51 0.00 36.37 3.18
271 272 3.130633 CGGAATGTGTCTGACTTTGACA 58.869 45.455 9.51 5.31 41.48 3.58
278 279 3.732212 TGTCTGACTTTGACACATGAGG 58.268 45.455 9.51 0.00 39.23 3.86
279 280 3.070018 GTCTGACTTTGACACATGAGGG 58.930 50.000 0.00 0.00 34.80 4.30
280 281 2.038952 TCTGACTTTGACACATGAGGGG 59.961 50.000 0.00 0.00 0.00 4.79
281 282 1.774254 TGACTTTGACACATGAGGGGT 59.226 47.619 0.00 0.00 0.00 4.95
282 283 2.174639 TGACTTTGACACATGAGGGGTT 59.825 45.455 0.00 0.00 0.00 4.11
283 284 3.392947 TGACTTTGACACATGAGGGGTTA 59.607 43.478 0.00 0.00 0.00 2.85
284 285 4.003648 GACTTTGACACATGAGGGGTTAG 58.996 47.826 0.00 0.00 0.00 2.34
285 286 3.650942 ACTTTGACACATGAGGGGTTAGA 59.349 43.478 0.00 0.00 0.00 2.10
286 287 4.104102 ACTTTGACACATGAGGGGTTAGAA 59.896 41.667 0.00 0.00 0.00 2.10
287 288 4.927267 TTGACACATGAGGGGTTAGAAT 57.073 40.909 0.00 0.00 0.00 2.40
288 289 6.012858 ACTTTGACACATGAGGGGTTAGAATA 60.013 38.462 0.00 0.00 0.00 1.75
289 290 5.614324 TGACACATGAGGGGTTAGAATAG 57.386 43.478 0.00 0.00 0.00 1.73
290 291 4.141711 TGACACATGAGGGGTTAGAATAGC 60.142 45.833 0.00 0.00 0.00 2.97
291 292 3.181465 ACACATGAGGGGTTAGAATAGCG 60.181 47.826 0.00 0.00 0.00 4.26
292 293 2.224305 ACATGAGGGGTTAGAATAGCGC 60.224 50.000 0.00 0.00 34.02 5.92
293 294 1.789523 TGAGGGGTTAGAATAGCGCT 58.210 50.000 17.26 17.26 40.86 5.92
294 295 2.953453 TGAGGGGTTAGAATAGCGCTA 58.047 47.619 21.30 21.30 38.68 4.26
295 296 3.302161 TGAGGGGTTAGAATAGCGCTAA 58.698 45.455 22.98 2.76 38.68 3.09
296 297 3.707611 TGAGGGGTTAGAATAGCGCTAAA 59.292 43.478 22.98 8.30 38.68 1.85
297 298 4.162698 TGAGGGGTTAGAATAGCGCTAAAA 59.837 41.667 22.98 10.67 38.68 1.52
298 299 5.106876 AGGGGTTAGAATAGCGCTAAAAA 57.893 39.130 22.98 10.31 37.09 1.94
329 330 2.194800 GAGACGATCGATCACTTGCA 57.805 50.000 24.34 0.00 0.00 4.08
330 331 2.530177 GAGACGATCGATCACTTGCAA 58.470 47.619 24.34 0.00 0.00 4.08
331 332 2.923655 GAGACGATCGATCACTTGCAAA 59.076 45.455 24.34 0.00 0.00 3.68
344 345 3.799281 CTTGCAAAGTTGAGGGACAAA 57.201 42.857 0.00 0.00 39.70 2.83
345 346 4.122143 CTTGCAAAGTTGAGGGACAAAA 57.878 40.909 0.00 0.00 39.70 2.44
346 347 4.502962 CTTGCAAAGTTGAGGGACAAAAA 58.497 39.130 0.00 0.00 39.70 1.94
347 348 4.751767 TGCAAAGTTGAGGGACAAAAAT 57.248 36.364 0.00 0.00 40.36 1.82
348 349 5.860941 TGCAAAGTTGAGGGACAAAAATA 57.139 34.783 0.00 0.00 40.36 1.40
349 350 6.418057 TGCAAAGTTGAGGGACAAAAATAT 57.582 33.333 0.00 0.00 40.36 1.28
350 351 7.531857 TGCAAAGTTGAGGGACAAAAATATA 57.468 32.000 0.00 0.00 40.36 0.86
351 352 7.375053 TGCAAAGTTGAGGGACAAAAATATAC 58.625 34.615 0.00 0.00 40.36 1.47
352 353 7.232534 TGCAAAGTTGAGGGACAAAAATATACT 59.767 33.333 0.00 0.00 40.36 2.12
353 354 7.542130 GCAAAGTTGAGGGACAAAAATATACTG 59.458 37.037 0.00 0.00 40.36 2.74
354 355 8.576442 CAAAGTTGAGGGACAAAAATATACTGT 58.424 33.333 0.00 0.00 40.36 3.55
355 356 9.802039 AAAGTTGAGGGACAAAAATATACTGTA 57.198 29.630 0.00 0.00 40.36 2.74
356 357 8.788325 AGTTGAGGGACAAAAATATACTGTAC 57.212 34.615 0.00 0.00 40.36 2.90
357 358 8.603304 AGTTGAGGGACAAAAATATACTGTACT 58.397 33.333 0.00 0.00 40.36 2.73
358 359 9.880157 GTTGAGGGACAAAAATATACTGTACTA 57.120 33.333 0.00 0.00 40.36 1.82
359 360 9.880157 TTGAGGGACAAAAATATACTGTACTAC 57.120 33.333 0.00 0.00 35.39 2.73
360 361 9.263446 TGAGGGACAAAAATATACTGTACTACT 57.737 33.333 0.00 0.00 0.00 2.57
409 416 9.047947 ACTTCTCTTATTTGACATAGGTAACCT 57.952 33.333 0.00 0.00 37.71 3.50
410 417 9.892130 CTTCTCTTATTTGACATAGGTAACCTT 57.108 33.333 0.00 0.00 34.61 3.50
411 418 9.886132 TTCTCTTATTTGACATAGGTAACCTTC 57.114 33.333 0.00 0.00 34.61 3.46
412 419 9.268282 TCTCTTATTTGACATAGGTAACCTTCT 57.732 33.333 0.00 0.00 34.61 2.85
421 432 8.052748 TGACATAGGTAACCTTCTTGCATTATT 58.947 33.333 0.00 0.00 34.61 1.40
432 443 5.252969 TCTTGCATTATTCATCCTTGCAC 57.747 39.130 0.00 0.00 42.51 4.57
899 911 0.103937 GCTAGAGCTAGGCCACACTG 59.896 60.000 5.01 0.00 38.21 3.66
922 934 4.441356 GGGTCATCAGAAGCTCAGAACTAG 60.441 50.000 0.00 0.00 0.00 2.57
957 973 2.637383 GGTCCGGTGCTCTTCGTCT 61.637 63.158 0.00 0.00 0.00 4.18
958 974 1.310933 GGTCCGGTGCTCTTCGTCTA 61.311 60.000 0.00 0.00 0.00 2.59
959 975 0.524862 GTCCGGTGCTCTTCGTCTAA 59.475 55.000 0.00 0.00 0.00 2.10
960 976 0.809385 TCCGGTGCTCTTCGTCTAAG 59.191 55.000 0.00 0.00 36.45 2.18
961 977 0.809385 CCGGTGCTCTTCGTCTAAGA 59.191 55.000 0.00 0.00 42.07 2.10
962 978 1.405821 CCGGTGCTCTTCGTCTAAGAT 59.594 52.381 0.00 0.00 43.32 2.40
963 979 2.541999 CCGGTGCTCTTCGTCTAAGATC 60.542 54.545 0.00 0.00 43.32 2.75
964 980 2.097629 CGGTGCTCTTCGTCTAAGATCA 59.902 50.000 0.00 0.00 43.32 2.92
965 981 3.427638 CGGTGCTCTTCGTCTAAGATCAA 60.428 47.826 0.00 0.00 43.32 2.57
966 982 4.688021 GGTGCTCTTCGTCTAAGATCAAT 58.312 43.478 0.00 0.00 43.32 2.57
967 983 4.742659 GGTGCTCTTCGTCTAAGATCAATC 59.257 45.833 0.00 0.00 43.32 2.67
968 984 4.742659 GTGCTCTTCGTCTAAGATCAATCC 59.257 45.833 0.00 0.00 43.32 3.01
969 985 4.202161 TGCTCTTCGTCTAAGATCAATCCC 60.202 45.833 0.00 0.00 43.32 3.85
970 986 4.797933 GCTCTTCGTCTAAGATCAATCCCC 60.798 50.000 0.00 0.00 43.32 4.81
1063 1079 2.334946 GCAACCTGCAGATTGGCGA 61.335 57.895 22.44 0.00 44.26 5.54
1111 1127 6.018180 CCTGATTTATTGTTTCTACCGCTACC 60.018 42.308 0.00 0.00 0.00 3.18
1132 1148 5.630121 ACCTCTTGTGTTGATGGATGTTTA 58.370 37.500 0.00 0.00 0.00 2.01
1137 1153 7.592938 TCTTGTGTTGATGGATGTTTATTGAC 58.407 34.615 0.00 0.00 0.00 3.18
1141 1157 6.150976 GTGTTGATGGATGTTTATTGACCTGA 59.849 38.462 0.00 0.00 0.00 3.86
1142 1158 6.375174 TGTTGATGGATGTTTATTGACCTGAG 59.625 38.462 0.00 0.00 0.00 3.35
1143 1159 4.883585 TGATGGATGTTTATTGACCTGAGC 59.116 41.667 0.00 0.00 0.00 4.26
1144 1160 3.620488 TGGATGTTTATTGACCTGAGCC 58.380 45.455 0.00 0.00 0.00 4.70
1145 1161 2.952310 GGATGTTTATTGACCTGAGCCC 59.048 50.000 0.00 0.00 0.00 5.19
1146 1162 3.372025 GGATGTTTATTGACCTGAGCCCT 60.372 47.826 0.00 0.00 0.00 5.19
1147 1163 3.071874 TGTTTATTGACCTGAGCCCTG 57.928 47.619 0.00 0.00 0.00 4.45
1438 1463 4.400961 AGCCTCACCTTCAGCGCC 62.401 66.667 2.29 0.00 0.00 6.53
1749 1778 0.387622 CCGTGTAACATCGGTCGTGT 60.388 55.000 0.00 0.00 41.58 4.49
1750 1779 0.979811 CGTGTAACATCGGTCGTGTC 59.020 55.000 0.00 0.00 35.74 3.67
1751 1780 0.979811 GTGTAACATCGGTCGTGTCG 59.020 55.000 0.00 0.00 36.32 4.35
1752 1781 0.592637 TGTAACATCGGTCGTGTCGT 59.407 50.000 0.00 0.00 0.00 4.34
1753 1782 0.979811 GTAACATCGGTCGTGTCGTG 59.020 55.000 0.00 0.00 0.00 4.35
1754 1783 0.592637 TAACATCGGTCGTGTCGTGT 59.407 50.000 0.00 0.00 0.00 4.49
1755 1784 0.662374 AACATCGGTCGTGTCGTGTC 60.662 55.000 0.00 0.00 0.00 3.67
1756 1785 1.209383 CATCGGTCGTGTCGTGTCT 59.791 57.895 0.00 0.00 0.00 3.41
1757 1786 0.793478 CATCGGTCGTGTCGTGTCTC 60.793 60.000 0.00 0.00 0.00 3.36
1758 1787 2.236803 ATCGGTCGTGTCGTGTCTCG 62.237 60.000 0.00 0.00 41.41 4.04
1759 1788 2.635899 GGTCGTGTCGTGTCTCGT 59.364 61.111 0.00 0.00 40.80 4.18
1760 1789 1.724929 GGTCGTGTCGTGTCTCGTG 60.725 63.158 0.00 0.00 40.80 4.35
1761 1790 1.010350 GTCGTGTCGTGTCTCGTGT 60.010 57.895 0.00 0.00 40.80 4.49
1762 1791 0.233074 GTCGTGTCGTGTCTCGTGTA 59.767 55.000 0.00 0.00 40.80 2.90
1763 1792 1.136141 GTCGTGTCGTGTCTCGTGTAT 60.136 52.381 0.00 0.00 40.80 2.29
1764 1793 1.136169 TCGTGTCGTGTCTCGTGTATG 60.136 52.381 0.00 0.00 40.80 2.39
1765 1794 1.399343 CGTGTCGTGTCTCGTGTATGT 60.399 52.381 0.00 0.00 40.80 2.29
1766 1795 1.976728 GTGTCGTGTCTCGTGTATGTG 59.023 52.381 0.00 0.00 40.80 3.21
1767 1796 1.605232 TGTCGTGTCTCGTGTATGTGT 59.395 47.619 0.00 0.00 40.80 3.72
1768 1797 2.807392 TGTCGTGTCTCGTGTATGTGTA 59.193 45.455 0.00 0.00 40.80 2.90
1769 1798 3.437741 TGTCGTGTCTCGTGTATGTGTAT 59.562 43.478 0.00 0.00 40.80 2.29
1770 1799 3.784468 GTCGTGTCTCGTGTATGTGTATG 59.216 47.826 0.00 0.00 40.80 2.39
1771 1800 3.685756 TCGTGTCTCGTGTATGTGTATGA 59.314 43.478 0.00 0.00 40.80 2.15
1772 1801 4.154556 TCGTGTCTCGTGTATGTGTATGAA 59.845 41.667 0.00 0.00 40.80 2.57
1773 1802 5.034797 CGTGTCTCGTGTATGTGTATGAAT 58.965 41.667 0.00 0.00 34.52 2.57
1777 1806 5.687730 GTCTCGTGTATGTGTATGAATCTGG 59.312 44.000 0.00 0.00 0.00 3.86
1822 1851 1.615124 TGATTTCGAGGAGGGGCCA 60.615 57.895 4.39 0.00 40.02 5.36
1912 1941 2.300967 GGGCTGGATGGTGGAGTCA 61.301 63.158 0.00 0.00 0.00 3.41
1957 1986 4.681978 GACCACTTCGCGGTGCCT 62.682 66.667 6.13 0.00 36.69 4.75
2227 2256 0.387367 GCGTCGTCTTCTTCAGCTCA 60.387 55.000 0.00 0.00 0.00 4.26
2371 2400 0.030638 GTGCGTTGTTGTTGCATCCT 59.969 50.000 0.00 0.00 41.23 3.24
2385 2414 7.517614 TGTTGCATCCTTGTTAATTAGACAA 57.482 32.000 10.66 10.66 35.81 3.18
2387 2416 6.176975 TGCATCCTTGTTAATTAGACAACG 57.823 37.500 8.31 6.32 33.73 4.10
2392 2426 4.201685 CCTTGTTAATTAGACAACGGCTCG 60.202 45.833 8.31 0.00 33.73 5.03
2393 2427 3.255725 TGTTAATTAGACAACGGCTCGG 58.744 45.455 0.00 0.00 0.00 4.63
2414 2453 0.455126 GCTTAAGCGCTCAAACTGCC 60.455 55.000 12.06 0.00 0.00 4.85
2420 2459 1.086696 GCGCTCAAACTGCCTATTGA 58.913 50.000 0.00 0.00 34.57 2.57
2428 2467 5.012239 TCAAACTGCCTATTGAGCTTGAAT 58.988 37.500 0.00 0.00 32.14 2.57
2429 2468 4.978083 AACTGCCTATTGAGCTTGAATG 57.022 40.909 0.00 0.00 0.00 2.67
2430 2469 3.960571 ACTGCCTATTGAGCTTGAATGT 58.039 40.909 0.00 0.00 0.00 2.71
2431 2470 3.693085 ACTGCCTATTGAGCTTGAATGTG 59.307 43.478 0.00 0.00 0.00 3.21
2432 2471 2.424601 TGCCTATTGAGCTTGAATGTGC 59.575 45.455 0.00 0.00 0.00 4.57
2454 2500 0.174845 TGCACTAAGGGATTCGTCGG 59.825 55.000 0.00 0.00 0.00 4.79
2455 2501 0.175073 GCACTAAGGGATTCGTCGGT 59.825 55.000 0.00 0.00 0.00 4.69
2456 2502 1.801765 GCACTAAGGGATTCGTCGGTC 60.802 57.143 0.00 0.00 0.00 4.79
2457 2503 1.749634 CACTAAGGGATTCGTCGGTCT 59.250 52.381 0.00 0.00 0.00 3.85
2458 2504 1.749634 ACTAAGGGATTCGTCGGTCTG 59.250 52.381 0.00 0.00 0.00 3.51
2459 2505 2.022195 CTAAGGGATTCGTCGGTCTGA 58.978 52.381 0.00 0.00 0.00 3.27
2486 2532 0.613260 GCCACCCTCAGTATGTCACA 59.387 55.000 0.00 0.00 37.40 3.58
2526 2572 2.564947 ACTGTACCTCTGCCTTCTCTTG 59.435 50.000 0.00 0.00 0.00 3.02
2530 2576 1.622811 ACCTCTGCCTTCTCTTGACTG 59.377 52.381 0.00 0.00 0.00 3.51
2555 2601 3.764434 AGATCACCTTCTCTTAGCAACGA 59.236 43.478 0.00 0.00 0.00 3.85
2561 2607 5.460419 CACCTTCTCTTAGCAACGATATGTC 59.540 44.000 0.00 0.00 0.00 3.06
2564 2610 6.451064 TTCTCTTAGCAACGATATGTCTCA 57.549 37.500 0.00 0.00 0.00 3.27
2565 2611 5.822278 TCTCTTAGCAACGATATGTCTCAC 58.178 41.667 0.00 0.00 0.00 3.51
2582 2628 7.379059 TGTCTCACCACATATTTGAGGATAT 57.621 36.000 6.63 0.00 37.86 1.63
2583 2629 7.445121 TGTCTCACCACATATTTGAGGATATC 58.555 38.462 6.63 0.00 37.86 1.63
2584 2630 7.290948 TGTCTCACCACATATTTGAGGATATCT 59.709 37.037 6.63 0.00 37.86 1.98
2585 2631 8.807118 GTCTCACCACATATTTGAGGATATCTA 58.193 37.037 6.63 0.00 37.86 1.98
2586 2632 8.807118 TCTCACCACATATTTGAGGATATCTAC 58.193 37.037 6.63 0.00 37.86 2.59
2707 2753 2.723273 GGGTGCAAAATGCCTACTAGT 58.277 47.619 0.00 0.00 44.23 2.57
2709 2755 2.423538 GGTGCAAAATGCCTACTAGTGG 59.576 50.000 5.39 1.52 44.23 4.00
2720 2766 1.895020 TACTAGTGGTGGGCAAGGCG 61.895 60.000 5.39 0.00 0.00 5.52
2744 2790 2.819595 CCTCCGTGTCCGCCATTG 60.820 66.667 0.00 0.00 0.00 2.82
2780 2826 3.329889 TGGGCATCGGTTCCTGCT 61.330 61.111 3.72 0.00 38.45 4.24
2801 2847 7.491696 CCTGCTCACCACTAGTAACTAAAATAC 59.508 40.741 0.00 0.00 0.00 1.89
2804 2850 9.379791 GCTCACCACTAGTAACTAAAATACAAT 57.620 33.333 0.00 0.00 0.00 2.71
2814 2860 9.798994 AGTAACTAAAATACAATAGTGACGAGG 57.201 33.333 0.00 0.00 38.18 4.63
2820 2866 3.134574 ACAATAGTGACGAGGCCAAAA 57.865 42.857 5.01 0.00 0.00 2.44
2845 2891 8.276252 ACATTTCACGCCACTAGTATATTTTT 57.724 30.769 0.00 0.00 0.00 1.94
2846 2892 9.386010 ACATTTCACGCCACTAGTATATTTTTA 57.614 29.630 0.00 0.00 0.00 1.52
2849 2895 7.416154 TCACGCCACTAGTATATTTTTATGC 57.584 36.000 0.00 0.00 0.00 3.14
2850 2896 6.987404 TCACGCCACTAGTATATTTTTATGCA 59.013 34.615 0.00 0.00 0.00 3.96
2871 2920 5.706369 TGCACTTTTCTTAATAAAGGCGGTA 59.294 36.000 12.29 2.60 37.01 4.02
2888 2937 0.874607 GTATTGCTCACTACCGGCGG 60.875 60.000 27.06 27.06 0.00 6.13
2923 2972 0.175760 CCTCGATGGAGAAAAGGCGA 59.824 55.000 6.27 0.00 43.27 5.54
2947 2996 2.325082 GCGGCAACCAACTCGTGAT 61.325 57.895 0.00 0.00 0.00 3.06
2949 2998 0.999406 CGGCAACCAACTCGTGATAG 59.001 55.000 0.00 0.00 0.00 2.08
2954 3003 4.464112 GCAACCAACTCGTGATAGTTTTC 58.536 43.478 0.00 0.00 37.61 2.29
2957 3006 3.985925 ACCAACTCGTGATAGTTTTCGAC 59.014 43.478 0.00 0.00 37.61 4.20
3049 3098 1.577328 GACGACATTGGCCACCACAG 61.577 60.000 3.88 0.00 30.78 3.66
3134 3183 1.033574 ATATATAGCCGCCCTCGAGC 58.966 55.000 6.99 0.00 38.10 5.03
3178 3227 1.674980 GAGGAGGTGTCGTCGGACT 60.675 63.158 6.57 0.00 43.79 3.85
3183 3232 2.126424 GTGTCGTCGGACTCTGCC 60.126 66.667 6.57 0.00 43.79 4.85
3184 3233 2.596338 TGTCGTCGGACTCTGCCA 60.596 61.111 6.57 0.00 43.79 4.92
3213 3262 2.025441 CTAGCTCGAGCAGGCGTC 59.975 66.667 36.87 8.04 45.16 5.19
3235 3284 4.018484 CGCAGGAGTATAGTAGTAGGGT 57.982 50.000 0.00 0.00 0.00 4.34
3247 3296 9.947669 GTATAGTAGTAGGGTATGCATAAATCG 57.052 37.037 8.28 0.00 0.00 3.34
3271 3320 1.348696 TGAGCTCAAGCAGATTGACCA 59.651 47.619 15.67 0.00 43.09 4.02
3277 3326 3.870274 TCAAGCAGATTGACCAGATGAG 58.130 45.455 0.00 0.00 43.09 2.90
3280 3329 2.435069 AGCAGATTGACCAGATGAGAGG 59.565 50.000 0.00 0.00 0.00 3.69
3309 3358 2.777494 CTCGTTCGCGACAATAGTGTA 58.223 47.619 9.15 0.00 45.62 2.90
3312 3361 2.346376 CGTTCGCGACAATAGTGTATGC 60.346 50.000 9.15 9.30 44.71 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.455190 GCTCTCTTTCAAGAAAGCTGTCAT 59.545 41.667 15.84 0.00 43.94 3.06
1 2 3.812053 GCTCTCTTTCAAGAAAGCTGTCA 59.188 43.478 15.84 0.36 43.94 3.58
2 3 4.403015 GCTCTCTTTCAAGAAAGCTGTC 57.597 45.455 15.84 0.00 43.94 3.51
6 7 6.638873 GGTTTTAAGCTCTCTTTCAAGAAAGC 59.361 38.462 15.84 6.75 46.87 3.51
7 8 7.707104 TGGTTTTAAGCTCTCTTTCAAGAAAG 58.293 34.615 14.77 14.77 46.82 2.62
8 9 7.556275 TCTGGTTTTAAGCTCTCTTTCAAGAAA 59.444 33.333 0.00 0.00 34.03 2.52
9 10 7.012421 GTCTGGTTTTAAGCTCTCTTTCAAGAA 59.988 37.037 0.00 0.00 34.03 2.52
10 11 6.483640 GTCTGGTTTTAAGCTCTCTTTCAAGA 59.516 38.462 0.00 0.00 33.85 3.02
11 12 6.260936 TGTCTGGTTTTAAGCTCTCTTTCAAG 59.739 38.462 0.00 0.00 33.85 3.02
12 13 6.119536 TGTCTGGTTTTAAGCTCTCTTTCAA 58.880 36.000 0.00 0.00 33.85 2.69
13 14 5.680619 TGTCTGGTTTTAAGCTCTCTTTCA 58.319 37.500 0.00 0.00 33.85 2.69
14 15 5.992217 TCTGTCTGGTTTTAAGCTCTCTTTC 59.008 40.000 0.00 0.00 33.85 2.62
15 16 5.930135 TCTGTCTGGTTTTAAGCTCTCTTT 58.070 37.500 0.00 0.00 33.85 2.52
16 17 5.552870 TCTGTCTGGTTTTAAGCTCTCTT 57.447 39.130 0.00 0.00 36.35 2.85
17 18 5.247110 TCATCTGTCTGGTTTTAAGCTCTCT 59.753 40.000 0.00 0.00 0.00 3.10
18 19 5.350091 GTCATCTGTCTGGTTTTAAGCTCTC 59.650 44.000 0.00 0.00 0.00 3.20
19 20 5.012561 AGTCATCTGTCTGGTTTTAAGCTCT 59.987 40.000 0.00 0.00 0.00 4.09
20 21 5.241662 AGTCATCTGTCTGGTTTTAAGCTC 58.758 41.667 0.00 0.00 0.00 4.09
21 22 5.234466 AGTCATCTGTCTGGTTTTAAGCT 57.766 39.130 0.00 0.00 0.00 3.74
22 23 6.166982 AGTAGTCATCTGTCTGGTTTTAAGC 58.833 40.000 0.00 0.00 0.00 3.09
23 24 8.608844 AAAGTAGTCATCTGTCTGGTTTTAAG 57.391 34.615 0.00 0.00 0.00 1.85
24 25 8.974060 AAAAGTAGTCATCTGTCTGGTTTTAA 57.026 30.769 0.00 0.00 0.00 1.52
25 26 8.974060 AAAAAGTAGTCATCTGTCTGGTTTTA 57.026 30.769 0.00 0.00 0.00 1.52
26 27 7.881775 AAAAAGTAGTCATCTGTCTGGTTTT 57.118 32.000 0.00 0.00 0.00 2.43
27 28 7.990886 TGTAAAAAGTAGTCATCTGTCTGGTTT 59.009 33.333 0.00 0.00 0.00 3.27
28 29 7.506114 TGTAAAAAGTAGTCATCTGTCTGGTT 58.494 34.615 0.00 0.00 0.00 3.67
29 30 7.062749 TGTAAAAAGTAGTCATCTGTCTGGT 57.937 36.000 0.00 0.00 0.00 4.00
30 31 9.088512 GTATGTAAAAAGTAGTCATCTGTCTGG 57.911 37.037 0.00 0.00 0.00 3.86
31 32 9.639601 TGTATGTAAAAAGTAGTCATCTGTCTG 57.360 33.333 0.00 0.00 0.00 3.51
34 35 9.998106 ACTTGTATGTAAAAAGTAGTCATCTGT 57.002 29.630 0.00 0.00 32.48 3.41
36 37 9.998106 ACACTTGTATGTAAAAAGTAGTCATCT 57.002 29.630 0.00 0.00 32.96 2.90
50 51 9.826574 GAGGAACCAATAATACACTTGTATGTA 57.173 33.333 2.62 0.00 40.78 2.29
51 52 8.325787 TGAGGAACCAATAATACACTTGTATGT 58.674 33.333 2.62 0.00 40.78 2.29
52 53 8.731275 TGAGGAACCAATAATACACTTGTATG 57.269 34.615 2.62 0.00 40.78 2.39
53 54 9.396022 CTTGAGGAACCAATAATACACTTGTAT 57.604 33.333 0.00 0.00 42.60 2.29
54 55 8.380099 ACTTGAGGAACCAATAATACACTTGTA 58.620 33.333 0.00 0.00 34.67 2.41
55 56 7.231467 ACTTGAGGAACCAATAATACACTTGT 58.769 34.615 0.00 0.00 0.00 3.16
56 57 7.687941 ACTTGAGGAACCAATAATACACTTG 57.312 36.000 0.00 0.00 0.00 3.16
57 58 9.227777 GTAACTTGAGGAACCAATAATACACTT 57.772 33.333 0.00 0.00 0.00 3.16
58 59 8.380099 TGTAACTTGAGGAACCAATAATACACT 58.620 33.333 0.00 0.00 0.00 3.55
59 60 8.556213 TGTAACTTGAGGAACCAATAATACAC 57.444 34.615 0.00 0.00 0.00 2.90
60 61 9.226606 CTTGTAACTTGAGGAACCAATAATACA 57.773 33.333 0.00 0.00 0.00 2.29
61 62 9.444600 TCTTGTAACTTGAGGAACCAATAATAC 57.555 33.333 0.00 0.00 0.00 1.89
63 64 8.934023 TTCTTGTAACTTGAGGAACCAATAAT 57.066 30.769 0.00 0.00 0.00 1.28
64 65 7.996644 ACTTCTTGTAACTTGAGGAACCAATAA 59.003 33.333 0.00 0.00 0.00 1.40
65 66 7.514721 ACTTCTTGTAACTTGAGGAACCAATA 58.485 34.615 0.00 0.00 0.00 1.90
66 67 6.365520 ACTTCTTGTAACTTGAGGAACCAAT 58.634 36.000 0.00 0.00 0.00 3.16
67 68 5.751586 ACTTCTTGTAACTTGAGGAACCAA 58.248 37.500 0.00 0.00 0.00 3.67
68 69 5.130477 AGACTTCTTGTAACTTGAGGAACCA 59.870 40.000 0.00 0.00 0.00 3.67
69 70 5.612351 AGACTTCTTGTAACTTGAGGAACC 58.388 41.667 0.00 0.00 0.00 3.62
70 71 7.171167 GGTAAGACTTCTTGTAACTTGAGGAAC 59.829 40.741 1.52 0.00 37.40 3.62
71 72 7.070821 AGGTAAGACTTCTTGTAACTTGAGGAA 59.929 37.037 1.52 0.00 37.40 3.36
72 73 6.553852 AGGTAAGACTTCTTGTAACTTGAGGA 59.446 38.462 1.52 0.00 37.40 3.71
73 74 6.760291 AGGTAAGACTTCTTGTAACTTGAGG 58.240 40.000 1.52 0.00 37.40 3.86
74 75 7.434492 TGAGGTAAGACTTCTTGTAACTTGAG 58.566 38.462 1.52 0.00 37.40 3.02
75 76 7.356089 TGAGGTAAGACTTCTTGTAACTTGA 57.644 36.000 1.52 0.00 37.40 3.02
76 77 8.091449 AGATGAGGTAAGACTTCTTGTAACTTG 58.909 37.037 1.52 0.00 37.40 3.16
77 78 8.196378 AGATGAGGTAAGACTTCTTGTAACTT 57.804 34.615 1.52 0.00 37.40 2.66
78 79 7.784470 AGATGAGGTAAGACTTCTTGTAACT 57.216 36.000 1.52 0.00 37.40 2.24
79 80 8.834749 AAAGATGAGGTAAGACTTCTTGTAAC 57.165 34.615 1.52 0.00 37.40 2.50
80 81 9.847224 AAAAAGATGAGGTAAGACTTCTTGTAA 57.153 29.630 1.52 0.00 37.40 2.41
81 82 9.490379 GAAAAAGATGAGGTAAGACTTCTTGTA 57.510 33.333 1.52 0.00 37.40 2.41
82 83 8.214364 AGAAAAAGATGAGGTAAGACTTCTTGT 58.786 33.333 1.52 0.00 37.40 3.16
83 84 8.614469 AGAAAAAGATGAGGTAAGACTTCTTG 57.386 34.615 1.52 0.00 37.40 3.02
85 86 9.936759 CTAAGAAAAAGATGAGGTAAGACTTCT 57.063 33.333 0.00 0.00 0.00 2.85
86 87 9.930693 TCTAAGAAAAAGATGAGGTAAGACTTC 57.069 33.333 0.00 0.00 0.00 3.01
88 89 9.936759 CTTCTAAGAAAAAGATGAGGTAAGACT 57.063 33.333 0.00 0.00 0.00 3.24
89 90 8.661257 GCTTCTAAGAAAAAGATGAGGTAAGAC 58.339 37.037 0.00 0.00 0.00 3.01
90 91 7.824779 GGCTTCTAAGAAAAAGATGAGGTAAGA 59.175 37.037 0.00 0.00 0.00 2.10
91 92 7.607991 TGGCTTCTAAGAAAAAGATGAGGTAAG 59.392 37.037 0.00 0.00 0.00 2.34
92 93 7.458397 TGGCTTCTAAGAAAAAGATGAGGTAA 58.542 34.615 0.00 0.00 0.00 2.85
93 94 7.016153 TGGCTTCTAAGAAAAAGATGAGGTA 57.984 36.000 0.00 0.00 0.00 3.08
94 95 5.880901 TGGCTTCTAAGAAAAAGATGAGGT 58.119 37.500 0.00 0.00 0.00 3.85
95 96 7.401955 AATGGCTTCTAAGAAAAAGATGAGG 57.598 36.000 0.00 0.00 0.00 3.86
99 100 9.929180 GGTTAAAATGGCTTCTAAGAAAAAGAT 57.071 29.630 0.00 0.00 0.00 2.40
100 101 8.364894 GGGTTAAAATGGCTTCTAAGAAAAAGA 58.635 33.333 0.00 0.00 0.00 2.52
101 102 8.367911 AGGGTTAAAATGGCTTCTAAGAAAAAG 58.632 33.333 0.00 0.00 0.00 2.27
102 103 8.257602 AGGGTTAAAATGGCTTCTAAGAAAAA 57.742 30.769 0.00 0.00 0.00 1.94
103 104 7.308951 CGAGGGTTAAAATGGCTTCTAAGAAAA 60.309 37.037 0.00 0.00 0.00 2.29
104 105 6.150474 CGAGGGTTAAAATGGCTTCTAAGAAA 59.850 38.462 0.00 0.00 0.00 2.52
105 106 5.646360 CGAGGGTTAAAATGGCTTCTAAGAA 59.354 40.000 0.00 0.00 0.00 2.52
106 107 5.183228 CGAGGGTTAAAATGGCTTCTAAGA 58.817 41.667 0.00 0.00 0.00 2.10
107 108 4.941873 ACGAGGGTTAAAATGGCTTCTAAG 59.058 41.667 0.00 0.00 0.00 2.18
108 109 4.698304 CACGAGGGTTAAAATGGCTTCTAA 59.302 41.667 0.00 0.00 0.00 2.10
109 110 4.258543 CACGAGGGTTAAAATGGCTTCTA 58.741 43.478 0.00 0.00 0.00 2.10
110 111 3.081804 CACGAGGGTTAAAATGGCTTCT 58.918 45.455 0.00 0.00 0.00 2.85
111 112 2.817844 ACACGAGGGTTAAAATGGCTTC 59.182 45.455 0.00 0.00 0.00 3.86
112 113 2.871453 ACACGAGGGTTAAAATGGCTT 58.129 42.857 0.00 0.00 0.00 4.35
113 114 2.579410 ACACGAGGGTTAAAATGGCT 57.421 45.000 0.00 0.00 0.00 4.75
114 115 3.653539 AAACACGAGGGTTAAAATGGC 57.346 42.857 0.00 0.00 0.00 4.40
115 116 5.474189 TCCTAAAACACGAGGGTTAAAATGG 59.526 40.000 0.00 0.00 33.27 3.16
116 117 6.376177 GTCCTAAAACACGAGGGTTAAAATG 58.624 40.000 0.00 0.00 33.27 2.32
117 118 5.474532 GGTCCTAAAACACGAGGGTTAAAAT 59.525 40.000 0.00 0.00 33.27 1.82
118 119 4.821260 GGTCCTAAAACACGAGGGTTAAAA 59.179 41.667 0.00 0.00 33.27 1.52
119 120 4.141528 TGGTCCTAAAACACGAGGGTTAAA 60.142 41.667 0.00 0.00 33.27 1.52
120 121 3.390639 TGGTCCTAAAACACGAGGGTTAA 59.609 43.478 0.00 0.00 33.27 2.01
121 122 2.971330 TGGTCCTAAAACACGAGGGTTA 59.029 45.455 0.00 0.00 33.27 2.85
122 123 1.770061 TGGTCCTAAAACACGAGGGTT 59.230 47.619 0.00 0.00 33.27 4.11
123 124 1.346722 CTGGTCCTAAAACACGAGGGT 59.653 52.381 0.00 0.00 33.27 4.34
124 125 1.621814 TCTGGTCCTAAAACACGAGGG 59.378 52.381 0.00 0.00 33.27 4.30
125 126 2.685100 GTCTGGTCCTAAAACACGAGG 58.315 52.381 0.00 0.00 0.00 4.63
126 127 2.288030 ACGTCTGGTCCTAAAACACGAG 60.288 50.000 0.00 0.00 0.00 4.18
127 128 1.682854 ACGTCTGGTCCTAAAACACGA 59.317 47.619 0.00 0.00 0.00 4.35
128 129 2.144482 ACGTCTGGTCCTAAAACACG 57.856 50.000 0.00 0.00 0.00 4.49
129 130 5.930569 AGAAATACGTCTGGTCCTAAAACAC 59.069 40.000 0.00 0.00 0.00 3.32
130 131 6.105397 AGAAATACGTCTGGTCCTAAAACA 57.895 37.500 0.00 0.00 0.00 2.83
131 132 5.579904 GGAGAAATACGTCTGGTCCTAAAAC 59.420 44.000 0.00 0.00 0.00 2.43
132 133 5.246656 TGGAGAAATACGTCTGGTCCTAAAA 59.753 40.000 0.00 0.00 0.00 1.52
133 134 4.773674 TGGAGAAATACGTCTGGTCCTAAA 59.226 41.667 0.00 0.00 0.00 1.85
134 135 4.346730 TGGAGAAATACGTCTGGTCCTAA 58.653 43.478 0.00 0.00 0.00 2.69
135 136 3.972133 TGGAGAAATACGTCTGGTCCTA 58.028 45.455 0.00 0.00 0.00 2.94
136 137 2.816411 TGGAGAAATACGTCTGGTCCT 58.184 47.619 0.00 0.00 0.00 3.85
137 138 3.604875 TTGGAGAAATACGTCTGGTCC 57.395 47.619 0.00 0.00 0.00 4.46
138 139 6.496338 AATTTTGGAGAAATACGTCTGGTC 57.504 37.500 0.00 0.00 0.00 4.02
139 140 7.989416 TTAATTTTGGAGAAATACGTCTGGT 57.011 32.000 0.00 0.00 0.00 4.00
140 141 9.685828 TTTTTAATTTTGGAGAAATACGTCTGG 57.314 29.630 0.00 0.00 0.00 3.86
153 154 9.114952 GGTTTTCACCTCATTTTTAATTTTGGA 57.885 29.630 0.00 0.00 40.44 3.53
154 155 8.067189 CGGTTTTCACCTCATTTTTAATTTTGG 58.933 33.333 0.00 0.00 41.64 3.28
155 156 7.585936 GCGGTTTTCACCTCATTTTTAATTTTG 59.414 33.333 0.00 0.00 41.64 2.44
156 157 7.497579 AGCGGTTTTCACCTCATTTTTAATTTT 59.502 29.630 0.00 0.00 41.64 1.82
157 158 6.989759 AGCGGTTTTCACCTCATTTTTAATTT 59.010 30.769 0.00 0.00 41.64 1.82
158 159 6.423604 CAGCGGTTTTCACCTCATTTTTAATT 59.576 34.615 0.00 0.00 41.64 1.40
159 160 5.925969 CAGCGGTTTTCACCTCATTTTTAAT 59.074 36.000 0.00 0.00 41.64 1.40
160 161 5.285651 CAGCGGTTTTCACCTCATTTTTAA 58.714 37.500 0.00 0.00 41.64 1.52
161 162 4.261825 CCAGCGGTTTTCACCTCATTTTTA 60.262 41.667 0.00 0.00 41.64 1.52
162 163 3.492482 CCAGCGGTTTTCACCTCATTTTT 60.492 43.478 0.00 0.00 41.64 1.94
163 164 2.035832 CCAGCGGTTTTCACCTCATTTT 59.964 45.455 0.00 0.00 41.64 1.82
164 165 1.613437 CCAGCGGTTTTCACCTCATTT 59.387 47.619 0.00 0.00 41.64 2.32
165 166 1.247567 CCAGCGGTTTTCACCTCATT 58.752 50.000 0.00 0.00 41.64 2.57
166 167 0.110486 ACCAGCGGTTTTCACCTCAT 59.890 50.000 0.00 0.00 41.64 2.90
167 168 0.817634 CACCAGCGGTTTTCACCTCA 60.818 55.000 0.00 0.00 41.64 3.86
168 169 0.818040 ACACCAGCGGTTTTCACCTC 60.818 55.000 0.00 0.00 41.64 3.85
169 170 0.818040 GACACCAGCGGTTTTCACCT 60.818 55.000 0.00 0.00 41.64 4.00
170 171 1.098712 TGACACCAGCGGTTTTCACC 61.099 55.000 0.00 0.00 40.16 4.02
171 172 0.028902 GTGACACCAGCGGTTTTCAC 59.971 55.000 16.47 16.47 38.30 3.18
172 173 0.107410 AGTGACACCAGCGGTTTTCA 60.107 50.000 0.84 2.03 31.02 2.69
173 174 0.307760 CAGTGACACCAGCGGTTTTC 59.692 55.000 0.84 0.00 31.02 2.29
174 175 1.101049 CCAGTGACACCAGCGGTTTT 61.101 55.000 0.84 0.00 31.02 2.43
175 176 1.525995 CCAGTGACACCAGCGGTTT 60.526 57.895 0.84 0.00 31.02 3.27
176 177 2.111043 CCAGTGACACCAGCGGTT 59.889 61.111 0.84 0.00 31.02 4.44
177 178 2.265467 AAACCAGTGACACCAGCGGT 62.265 55.000 0.84 1.40 35.62 5.68
178 179 1.101049 AAAACCAGTGACACCAGCGG 61.101 55.000 0.84 0.74 0.00 5.52
179 180 0.307760 GAAAACCAGTGACACCAGCG 59.692 55.000 0.84 0.00 0.00 5.18
180 181 0.307760 CGAAAACCAGTGACACCAGC 59.692 55.000 0.84 0.00 0.00 4.85
181 182 0.307760 GCGAAAACCAGTGACACCAG 59.692 55.000 0.84 0.00 0.00 4.00
182 183 0.107410 AGCGAAAACCAGTGACACCA 60.107 50.000 0.84 0.00 0.00 4.17
183 184 1.873698 TAGCGAAAACCAGTGACACC 58.126 50.000 0.84 0.00 0.00 4.16
184 185 2.806244 ACATAGCGAAAACCAGTGACAC 59.194 45.455 0.00 0.00 0.00 3.67
185 186 3.064207 GACATAGCGAAAACCAGTGACA 58.936 45.455 0.00 0.00 0.00 3.58
186 187 2.415512 GGACATAGCGAAAACCAGTGAC 59.584 50.000 0.00 0.00 0.00 3.67
187 188 2.301870 AGGACATAGCGAAAACCAGTGA 59.698 45.455 0.00 0.00 0.00 3.41
188 189 2.673368 GAGGACATAGCGAAAACCAGTG 59.327 50.000 0.00 0.00 0.00 3.66
189 190 2.301870 TGAGGACATAGCGAAAACCAGT 59.698 45.455 0.00 0.00 0.00 4.00
190 191 2.673368 GTGAGGACATAGCGAAAACCAG 59.327 50.000 0.00 0.00 0.00 4.00
191 192 2.301870 AGTGAGGACATAGCGAAAACCA 59.698 45.455 0.00 0.00 0.00 3.67
192 193 2.973945 AGTGAGGACATAGCGAAAACC 58.026 47.619 0.00 0.00 0.00 3.27
193 194 3.424962 GCAAGTGAGGACATAGCGAAAAC 60.425 47.826 0.00 0.00 0.00 2.43
194 195 2.742053 GCAAGTGAGGACATAGCGAAAA 59.258 45.455 0.00 0.00 0.00 2.29
195 196 2.346803 GCAAGTGAGGACATAGCGAAA 58.653 47.619 0.00 0.00 0.00 3.46
196 197 1.405526 GGCAAGTGAGGACATAGCGAA 60.406 52.381 0.00 0.00 0.00 4.70
197 198 0.175760 GGCAAGTGAGGACATAGCGA 59.824 55.000 0.00 0.00 0.00 4.93
198 199 0.108186 TGGCAAGTGAGGACATAGCG 60.108 55.000 0.00 0.00 0.00 4.26
199 200 1.945394 CATGGCAAGTGAGGACATAGC 59.055 52.381 0.00 0.00 0.00 2.97
200 201 2.569059 CCATGGCAAGTGAGGACATAG 58.431 52.381 0.00 0.00 0.00 2.23
201 202 1.408683 GCCATGGCAAGTGAGGACATA 60.409 52.381 32.08 0.00 41.49 2.29
202 203 0.682209 GCCATGGCAAGTGAGGACAT 60.682 55.000 32.08 0.00 41.49 3.06
203 204 1.303561 GCCATGGCAAGTGAGGACA 60.304 57.895 32.08 0.00 41.49 4.02
204 205 2.401766 CGCCATGGCAAGTGAGGAC 61.402 63.158 34.93 2.99 42.06 3.85
205 206 2.046023 CGCCATGGCAAGTGAGGA 60.046 61.111 34.93 0.00 42.06 3.71
206 207 2.360350 ACGCCATGGCAAGTGAGG 60.360 61.111 34.93 19.51 42.06 3.86
207 208 2.693762 CCACGCCATGGCAAGTGAG 61.694 63.158 33.64 23.46 43.24 3.51
208 209 2.672651 CCACGCCATGGCAAGTGA 60.673 61.111 33.64 0.00 43.24 3.41
222 223 0.883370 AGAAACGAGGCGGAAACCAC 60.883 55.000 0.00 0.00 0.00 4.16
223 224 0.179040 AAGAAACGAGGCGGAAACCA 60.179 50.000 0.00 0.00 0.00 3.67
224 225 0.237498 CAAGAAACGAGGCGGAAACC 59.763 55.000 0.00 0.00 0.00 3.27
225 226 0.942252 ACAAGAAACGAGGCGGAAAC 59.058 50.000 0.00 0.00 0.00 2.78
226 227 1.670791 AACAAGAAACGAGGCGGAAA 58.329 45.000 0.00 0.00 0.00 3.13
227 228 1.670791 AAACAAGAAACGAGGCGGAA 58.329 45.000 0.00 0.00 0.00 4.30
228 229 1.332375 CAAAACAAGAAACGAGGCGGA 59.668 47.619 0.00 0.00 0.00 5.54
229 230 1.332375 TCAAAACAAGAAACGAGGCGG 59.668 47.619 0.00 0.00 0.00 6.13
230 231 2.372350 GTCAAAACAAGAAACGAGGCG 58.628 47.619 0.00 0.00 0.00 5.52
231 232 2.372350 CGTCAAAACAAGAAACGAGGC 58.628 47.619 0.00 0.00 35.45 4.70
232 233 2.610374 TCCGTCAAAACAAGAAACGAGG 59.390 45.455 0.00 0.00 35.45 4.63
233 234 3.936902 TCCGTCAAAACAAGAAACGAG 57.063 42.857 0.00 0.00 35.45 4.18
234 235 4.095185 ACATTCCGTCAAAACAAGAAACGA 59.905 37.500 0.00 0.00 35.45 3.85
235 236 4.204168 CACATTCCGTCAAAACAAGAAACG 59.796 41.667 0.00 0.00 0.00 3.60
236 237 5.099575 ACACATTCCGTCAAAACAAGAAAC 58.900 37.500 0.00 0.00 0.00 2.78
237 238 5.124776 AGACACATTCCGTCAAAACAAGAAA 59.875 36.000 0.00 0.00 35.77 2.52
238 239 4.638421 AGACACATTCCGTCAAAACAAGAA 59.362 37.500 0.00 0.00 35.77 2.52
239 240 4.035091 CAGACACATTCCGTCAAAACAAGA 59.965 41.667 0.00 0.00 35.77 3.02
240 241 4.035091 TCAGACACATTCCGTCAAAACAAG 59.965 41.667 0.00 0.00 35.77 3.16
241 242 3.942115 TCAGACACATTCCGTCAAAACAA 59.058 39.130 0.00 0.00 35.77 2.83
242 243 3.311322 GTCAGACACATTCCGTCAAAACA 59.689 43.478 0.00 0.00 35.77 2.83
243 244 3.560068 AGTCAGACACATTCCGTCAAAAC 59.440 43.478 2.66 0.00 35.77 2.43
244 245 3.804036 AGTCAGACACATTCCGTCAAAA 58.196 40.909 2.66 0.00 35.77 2.44
245 246 3.469008 AGTCAGACACATTCCGTCAAA 57.531 42.857 2.66 0.00 35.77 2.69
246 247 3.469008 AAGTCAGACACATTCCGTCAA 57.531 42.857 2.66 0.00 35.77 3.18
247 248 3.130633 CAAAGTCAGACACATTCCGTCA 58.869 45.455 2.66 0.00 35.77 4.35
248 249 3.184581 GTCAAAGTCAGACACATTCCGTC 59.815 47.826 2.66 0.00 36.06 4.79
249 250 3.131396 GTCAAAGTCAGACACATTCCGT 58.869 45.455 2.66 0.00 36.06 4.69
250 251 3.130633 TGTCAAAGTCAGACACATTCCG 58.869 45.455 2.66 0.00 40.80 4.30
257 258 3.494924 CCCTCATGTGTCAAAGTCAGACA 60.495 47.826 2.66 0.00 43.23 3.41
258 259 3.070018 CCCTCATGTGTCAAAGTCAGAC 58.930 50.000 0.00 0.00 36.55 3.51
259 260 2.038952 CCCCTCATGTGTCAAAGTCAGA 59.961 50.000 0.00 0.00 0.00 3.27
260 261 2.224621 ACCCCTCATGTGTCAAAGTCAG 60.225 50.000 0.00 0.00 0.00 3.51
261 262 1.774254 ACCCCTCATGTGTCAAAGTCA 59.226 47.619 0.00 0.00 0.00 3.41
262 263 2.568623 ACCCCTCATGTGTCAAAGTC 57.431 50.000 0.00 0.00 0.00 3.01
263 264 3.650942 TCTAACCCCTCATGTGTCAAAGT 59.349 43.478 0.00 0.00 0.00 2.66
264 265 4.286297 TCTAACCCCTCATGTGTCAAAG 57.714 45.455 0.00 0.00 0.00 2.77
265 266 4.715534 TTCTAACCCCTCATGTGTCAAA 57.284 40.909 0.00 0.00 0.00 2.69
266 267 4.927267 ATTCTAACCCCTCATGTGTCAA 57.073 40.909 0.00 0.00 0.00 3.18
267 268 4.141711 GCTATTCTAACCCCTCATGTGTCA 60.142 45.833 0.00 0.00 0.00 3.58
268 269 4.381411 GCTATTCTAACCCCTCATGTGTC 58.619 47.826 0.00 0.00 0.00 3.67
269 270 3.181465 CGCTATTCTAACCCCTCATGTGT 60.181 47.826 0.00 0.00 0.00 3.72
270 271 3.393800 CGCTATTCTAACCCCTCATGTG 58.606 50.000 0.00 0.00 0.00 3.21
271 272 2.224305 GCGCTATTCTAACCCCTCATGT 60.224 50.000 0.00 0.00 0.00 3.21
272 273 2.037772 AGCGCTATTCTAACCCCTCATG 59.962 50.000 8.99 0.00 0.00 3.07
273 274 2.330216 AGCGCTATTCTAACCCCTCAT 58.670 47.619 8.99 0.00 0.00 2.90
274 275 1.789523 AGCGCTATTCTAACCCCTCA 58.210 50.000 8.99 0.00 0.00 3.86
275 276 4.332428 TTTAGCGCTATTCTAACCCCTC 57.668 45.455 19.60 0.00 0.00 4.30
276 277 4.765813 TTTTAGCGCTATTCTAACCCCT 57.234 40.909 19.60 0.00 0.00 4.79
296 297 4.615961 CGATCGTCTCGTGACTTACTTTTT 59.384 41.667 15.02 0.00 42.56 1.94
297 298 4.156915 CGATCGTCTCGTGACTTACTTTT 58.843 43.478 15.02 0.00 42.56 2.27
298 299 3.744987 CGATCGTCTCGTGACTTACTTT 58.255 45.455 15.02 0.00 42.56 2.66
299 300 3.386613 CGATCGTCTCGTGACTTACTT 57.613 47.619 15.02 0.00 42.56 2.24
310 311 2.194800 TGCAAGTGATCGATCGTCTC 57.805 50.000 20.03 13.43 0.00 3.36
311 312 2.654749 TTGCAAGTGATCGATCGTCT 57.345 45.000 20.03 16.90 0.00 4.18
312 313 2.668457 ACTTTGCAAGTGATCGATCGTC 59.332 45.455 20.03 15.05 41.01 4.20
313 314 2.688507 ACTTTGCAAGTGATCGATCGT 58.311 42.857 20.03 7.56 41.01 3.73
314 315 3.123453 TCAACTTTGCAAGTGATCGATCG 59.877 43.478 20.03 9.36 41.91 3.69
315 316 4.436584 CCTCAACTTTGCAAGTGATCGATC 60.437 45.833 18.72 18.72 41.91 3.69
316 317 3.438087 CCTCAACTTTGCAAGTGATCGAT 59.562 43.478 0.00 0.00 41.91 3.59
317 318 2.807967 CCTCAACTTTGCAAGTGATCGA 59.192 45.455 0.00 0.00 41.91 3.59
318 319 2.095567 CCCTCAACTTTGCAAGTGATCG 60.096 50.000 0.00 0.00 41.91 3.69
319 320 3.057946 GTCCCTCAACTTTGCAAGTGATC 60.058 47.826 0.00 0.00 41.91 2.92
320 321 2.887152 GTCCCTCAACTTTGCAAGTGAT 59.113 45.455 0.00 0.00 41.91 3.06
321 322 2.297701 GTCCCTCAACTTTGCAAGTGA 58.702 47.619 0.00 4.40 41.91 3.41
322 323 2.023673 TGTCCCTCAACTTTGCAAGTG 58.976 47.619 0.00 0.00 41.91 3.16
323 324 2.435372 TGTCCCTCAACTTTGCAAGT 57.565 45.000 0.00 0.00 45.46 3.16
324 325 3.799281 TTTGTCCCTCAACTTTGCAAG 57.201 42.857 0.00 0.00 35.61 4.01
325 326 4.543590 TTTTTGTCCCTCAACTTTGCAA 57.456 36.364 0.00 0.00 35.61 4.08
326 327 4.751767 ATTTTTGTCCCTCAACTTTGCA 57.248 36.364 0.00 0.00 35.61 4.08
327 328 7.542130 CAGTATATTTTTGTCCCTCAACTTTGC 59.458 37.037 0.00 0.00 35.61 3.68
328 329 8.576442 ACAGTATATTTTTGTCCCTCAACTTTG 58.424 33.333 0.00 0.00 35.61 2.77
329 330 8.706322 ACAGTATATTTTTGTCCCTCAACTTT 57.294 30.769 0.00 0.00 35.61 2.66
330 331 9.227777 GTACAGTATATTTTTGTCCCTCAACTT 57.772 33.333 0.00 0.00 35.61 2.66
331 332 8.603304 AGTACAGTATATTTTTGTCCCTCAACT 58.397 33.333 0.00 0.00 35.61 3.16
332 333 8.788325 AGTACAGTATATTTTTGTCCCTCAAC 57.212 34.615 0.00 0.00 35.61 3.18
333 334 9.880157 GTAGTACAGTATATTTTTGTCCCTCAA 57.120 33.333 0.00 0.00 0.00 3.02
334 335 9.263446 AGTAGTACAGTATATTTTTGTCCCTCA 57.737 33.333 2.52 0.00 0.00 3.86
378 379 8.095169 ACCTATGTCAAATAAGAGAAGTCGTTT 58.905 33.333 0.00 0.00 0.00 3.60
389 394 8.398665 GCAAGAAGGTTACCTATGTCAAATAAG 58.601 37.037 3.55 0.00 31.13 1.73
409 416 5.918426 TGCAAGGATGAATAATGCAAGAA 57.082 34.783 0.00 0.00 43.39 2.52
421 432 2.203470 TCAATGCAGTGCAAGGATGA 57.797 45.000 23.90 19.69 43.62 2.92
432 443 5.886992 TGCAAGAACTAATCATCAATGCAG 58.113 37.500 0.00 0.00 36.43 4.41
542 554 5.301805 GTCCATGTTCCTCTTTCTCCAAAAA 59.698 40.000 0.00 0.00 0.00 1.94
543 555 4.827284 GTCCATGTTCCTCTTTCTCCAAAA 59.173 41.667 0.00 0.00 0.00 2.44
544 556 4.104738 AGTCCATGTTCCTCTTTCTCCAAA 59.895 41.667 0.00 0.00 0.00 3.28
545 557 3.652869 AGTCCATGTTCCTCTTTCTCCAA 59.347 43.478 0.00 0.00 0.00 3.53
546 558 3.251484 AGTCCATGTTCCTCTTTCTCCA 58.749 45.455 0.00 0.00 0.00 3.86
547 559 3.261897 TGAGTCCATGTTCCTCTTTCTCC 59.738 47.826 0.00 0.00 0.00 3.71
548 560 4.543590 TGAGTCCATGTTCCTCTTTCTC 57.456 45.455 0.00 0.00 0.00 2.87
549 561 4.841422 CATGAGTCCATGTTCCTCTTTCT 58.159 43.478 0.00 0.00 43.90 2.52
899 911 2.235898 AGTTCTGAGCTTCTGATGACCC 59.764 50.000 0.00 0.00 0.00 4.46
957 973 0.679505 CGCGGAGGGGATTGATCTTA 59.320 55.000 0.00 0.00 36.55 2.10
958 974 1.447643 CGCGGAGGGGATTGATCTT 59.552 57.895 0.00 0.00 36.55 2.40
959 975 3.142393 CGCGGAGGGGATTGATCT 58.858 61.111 0.00 0.00 36.55 2.75
1063 1079 3.640029 ACGTTACCATCGGTGATTCCTAT 59.360 43.478 0.00 0.00 36.19 2.57
1089 1105 6.985059 AGAGGTAGCGGTAGAAACAATAAATC 59.015 38.462 0.00 0.00 0.00 2.17
1096 1112 2.895404 ACAAGAGGTAGCGGTAGAAACA 59.105 45.455 0.00 0.00 0.00 2.83
1111 1127 7.752239 GTCAATAAACATCCATCAACACAAGAG 59.248 37.037 0.00 0.00 0.00 2.85
1132 1148 1.606531 GCTCAGGGCTCAGGTCAAT 59.393 57.895 0.00 0.00 38.06 2.57
1165 1181 3.872603 AGCCCTGCGACCACACAA 61.873 61.111 0.00 0.00 0.00 3.33
1187 1205 1.959226 GCTCGAAGTTGCCGTTGGA 60.959 57.895 0.00 0.00 0.00 3.53
1244 1262 4.925576 GATCGACGACGCGCCCAT 62.926 66.667 5.73 0.00 39.58 4.00
1273 1291 3.216944 CTCCACGAACCCCGACGTT 62.217 63.158 0.00 0.00 40.76 3.99
1624 1649 2.359404 ACGGAGTCGATGAGGGGT 59.641 61.111 0.00 0.00 29.74 4.95
1716 1741 1.447314 CACGGCGTAGGGAAGGAAC 60.447 63.158 14.22 0.00 0.00 3.62
1749 1778 3.685756 TCATACACATACACGAGACACGA 59.314 43.478 0.00 0.00 45.77 4.35
1751 1780 6.197282 CAGATTCATACACATACACGAGACAC 59.803 42.308 0.00 0.00 0.00 3.67
1752 1781 6.265577 CAGATTCATACACATACACGAGACA 58.734 40.000 0.00 0.00 0.00 3.41
1753 1782 5.687730 CCAGATTCATACACATACACGAGAC 59.312 44.000 0.00 0.00 0.00 3.36
1754 1783 5.359860 ACCAGATTCATACACATACACGAGA 59.640 40.000 0.00 0.00 0.00 4.04
1755 1784 5.592054 ACCAGATTCATACACATACACGAG 58.408 41.667 0.00 0.00 0.00 4.18
1756 1785 5.359860 AGACCAGATTCATACACATACACGA 59.640 40.000 0.00 0.00 0.00 4.35
1757 1786 5.460091 CAGACCAGATTCATACACATACACG 59.540 44.000 0.00 0.00 0.00 4.49
1758 1787 6.341316 ACAGACCAGATTCATACACATACAC 58.659 40.000 0.00 0.00 0.00 2.90
1759 1788 6.544928 ACAGACCAGATTCATACACATACA 57.455 37.500 0.00 0.00 0.00 2.29
1760 1789 7.941919 TCTACAGACCAGATTCATACACATAC 58.058 38.462 0.00 0.00 0.00 2.39
1761 1790 7.998964 TCTCTACAGACCAGATTCATACACATA 59.001 37.037 0.00 0.00 0.00 2.29
1762 1791 6.836007 TCTCTACAGACCAGATTCATACACAT 59.164 38.462 0.00 0.00 0.00 3.21
1763 1792 6.187682 TCTCTACAGACCAGATTCATACACA 58.812 40.000 0.00 0.00 0.00 3.72
1764 1793 6.701145 TCTCTACAGACCAGATTCATACAC 57.299 41.667 0.00 0.00 0.00 2.90
1765 1794 6.096987 GGTTCTCTACAGACCAGATTCATACA 59.903 42.308 0.00 0.00 0.00 2.29
1766 1795 6.322712 AGGTTCTCTACAGACCAGATTCATAC 59.677 42.308 0.00 0.00 0.00 2.39
1767 1796 6.322456 CAGGTTCTCTACAGACCAGATTCATA 59.678 42.308 0.00 0.00 0.00 2.15
1768 1797 5.128499 CAGGTTCTCTACAGACCAGATTCAT 59.872 44.000 0.00 0.00 0.00 2.57
1769 1798 4.464244 CAGGTTCTCTACAGACCAGATTCA 59.536 45.833 0.00 0.00 0.00 2.57
1770 1799 4.142049 CCAGGTTCTCTACAGACCAGATTC 60.142 50.000 0.00 0.00 0.00 2.52
1771 1800 3.772025 CCAGGTTCTCTACAGACCAGATT 59.228 47.826 0.00 0.00 0.00 2.40
1772 1801 3.245803 ACCAGGTTCTCTACAGACCAGAT 60.246 47.826 0.00 0.00 0.00 2.90
1773 1802 2.110188 ACCAGGTTCTCTACAGACCAGA 59.890 50.000 0.00 0.00 0.00 3.86
1777 1806 3.827302 TCTTCACCAGGTTCTCTACAGAC 59.173 47.826 0.00 0.00 0.00 3.51
1822 1851 0.104672 TGGTCCCGGGGATGATGTAT 60.105 55.000 23.50 0.00 32.73 2.29
1867 1896 1.807165 CGAGTGCTCGTCCACCATG 60.807 63.158 12.87 0.00 46.99 3.66
1889 1918 4.738998 CACCATCCAGCCCGGCAA 62.739 66.667 13.15 0.00 33.14 4.52
1897 1926 1.269958 TGAGTGACTCCACCATCCAG 58.730 55.000 10.52 0.00 44.22 3.86
1912 1941 1.045407 TGTACTTGACGGCCTTGAGT 58.955 50.000 0.00 0.31 0.00 3.41
2077 2106 3.157252 ATGAGCGACCCTCGGCAT 61.157 61.111 0.00 0.00 43.82 4.40
2083 2112 2.284625 TCCACCATGAGCGACCCT 60.285 61.111 0.00 0.00 0.00 4.34
2227 2256 2.028385 GTCGGTCCTGGTGTTGTAGAAT 60.028 50.000 0.00 0.00 0.00 2.40
2349 2378 2.307049 GATGCAACAACAACGCACTAC 58.693 47.619 0.00 0.00 38.73 2.73
2371 2400 3.680937 CCGAGCCGTTGTCTAATTAACAA 59.319 43.478 8.31 8.31 34.37 2.83
2392 2426 0.875059 AGTTTGAGCGCTTAAGCACC 59.125 50.000 26.14 16.25 42.21 5.01
2393 2427 1.955762 CAGTTTGAGCGCTTAAGCAC 58.044 50.000 26.14 17.53 42.21 4.40
2409 2443 3.693085 CACATTCAAGCTCAATAGGCAGT 59.307 43.478 0.00 0.00 0.00 4.40
2410 2444 3.488721 GCACATTCAAGCTCAATAGGCAG 60.489 47.826 0.00 0.00 0.00 4.85
2414 2453 4.659088 CACAGCACATTCAAGCTCAATAG 58.341 43.478 0.00 0.00 39.50 1.73
2420 2459 2.723231 TGCACAGCACATTCAAGCT 58.277 47.368 0.00 0.00 42.94 3.74
2430 2469 1.675714 CGAATCCCTTAGTGCACAGCA 60.676 52.381 21.04 0.00 35.60 4.41
2431 2470 1.009829 CGAATCCCTTAGTGCACAGC 58.990 55.000 21.04 0.00 0.00 4.40
2432 2471 2.271800 GACGAATCCCTTAGTGCACAG 58.728 52.381 21.04 8.51 0.00 3.66
2445 2484 1.332375 CCTCTCTCAGACCGACGAATC 59.668 57.143 0.00 0.00 0.00 2.52
2454 2500 1.594310 GGTGGCACCTCTCTCAGAC 59.406 63.158 29.22 0.00 34.73 3.51
2455 2501 1.610673 GGGTGGCACCTCTCTCAGA 60.611 63.158 33.87 0.00 38.64 3.27
2456 2502 1.611851 AGGGTGGCACCTCTCTCAG 60.612 63.158 33.87 0.00 38.64 3.35
2457 2503 2.533435 AGGGTGGCACCTCTCTCA 59.467 61.111 33.87 0.00 38.64 3.27
2486 2532 3.560068 CAGTTAACGTCTTCCAACAGCTT 59.440 43.478 0.00 0.00 0.00 3.74
2537 2583 5.352284 ACATATCGTTGCTAAGAGAAGGTG 58.648 41.667 0.00 0.00 0.00 4.00
2539 2585 5.837437 AGACATATCGTTGCTAAGAGAAGG 58.163 41.667 0.00 0.00 0.00 3.46
2540 2586 6.416455 GTGAGACATATCGTTGCTAAGAGAAG 59.584 42.308 0.00 0.00 0.00 2.85
2555 2601 7.379059 TCCTCAAATATGTGGTGAGACATAT 57.621 36.000 0.00 0.00 46.84 1.78
2561 2607 8.811017 AGTAGATATCCTCAAATATGTGGTGAG 58.189 37.037 0.00 0.00 40.39 3.51
2564 2610 8.964533 AGAGTAGATATCCTCAAATATGTGGT 57.035 34.615 10.48 0.00 40.39 4.16
2642 2688 5.751509 CAGTAGTGCACGCAATATAGGTAAA 59.248 40.000 12.01 0.00 0.00 2.01
2720 2766 3.462678 GGACACGGAGGAGAGGGC 61.463 72.222 0.00 0.00 0.00 5.19
2729 2775 0.537653 TTATCAATGGCGGACACGGA 59.462 50.000 0.00 0.00 41.36 4.69
2735 2781 5.508200 GGTAACAAATTATCAATGGCGGA 57.492 39.130 0.00 0.00 0.00 5.54
2768 2814 1.194781 AGTGGTGAGCAGGAACCGAT 61.195 55.000 0.00 0.00 39.47 4.18
2770 2816 0.108615 CTAGTGGTGAGCAGGAACCG 60.109 60.000 0.00 0.00 39.47 4.44
2801 2847 2.811431 TGTTTTGGCCTCGTCACTATTG 59.189 45.455 3.32 0.00 0.00 1.90
2804 2850 2.851263 ATGTTTTGGCCTCGTCACTA 57.149 45.000 3.32 0.00 0.00 2.74
2813 2859 0.249657 TGGCGTGAAATGTTTTGGCC 60.250 50.000 0.00 0.00 39.48 5.36
2814 2860 0.858583 GTGGCGTGAAATGTTTTGGC 59.141 50.000 0.00 0.00 0.00 4.52
2820 2866 7.859325 AAAATATACTAGTGGCGTGAAATGT 57.141 32.000 5.39 0.00 0.00 2.71
2845 2891 6.376018 ACCGCCTTTATTAAGAAAAGTGCATA 59.624 34.615 17.11 0.00 33.46 3.14
2846 2892 5.185056 ACCGCCTTTATTAAGAAAAGTGCAT 59.815 36.000 17.11 8.86 33.46 3.96
2848 2894 5.055642 ACCGCCTTTATTAAGAAAAGTGC 57.944 39.130 10.54 11.34 33.05 4.40
2849 2895 7.220108 GCAATACCGCCTTTATTAAGAAAAGTG 59.780 37.037 10.54 5.41 33.05 3.16
2850 2896 7.122204 AGCAATACCGCCTTTATTAAGAAAAGT 59.878 33.333 10.54 3.66 33.05 2.66
2856 2905 5.527582 AGTGAGCAATACCGCCTTTATTAAG 59.472 40.000 0.00 0.00 0.00 1.85
2871 2920 2.180159 AACCGCCGGTAGTGAGCAAT 62.180 55.000 10.30 0.00 33.12 3.56
2888 2937 3.354467 TCGAGGAGGAAACTAGAGGAAC 58.646 50.000 0.00 0.00 44.43 3.62
2923 2972 2.676471 GTTGGTTGCCGCATCCCT 60.676 61.111 16.33 0.00 0.00 4.20
2957 3006 5.938125 TCCTTCCTACCTTCTTTTCGAATTG 59.062 40.000 0.00 0.00 0.00 2.32
2973 3022 1.381327 CGCCACCCTCTCCTTCCTA 60.381 63.158 0.00 0.00 0.00 2.94
3134 3183 0.397816 AGGTTCTCCCCATCCTCGAG 60.398 60.000 5.13 5.13 0.00 4.04
3138 3187 4.840545 GGAGGTTCTCCCCATCCT 57.159 61.111 2.65 0.00 44.36 3.24
3213 3262 3.244840 ACCCTACTACTATACTCCTGCGG 60.245 52.174 0.00 0.00 0.00 5.69
3217 3266 6.715350 TGCATACCCTACTACTATACTCCT 57.285 41.667 0.00 0.00 0.00 3.69
3235 3284 6.676237 TGAGCTCAAAACGATTTATGCATA 57.324 33.333 15.67 1.16 32.06 3.14
3247 3296 4.225208 GTCAATCTGCTTGAGCTCAAAAC 58.775 43.478 28.16 22.58 44.44 2.43
3271 3320 0.641601 AGCTCTTCCCCCTCTCATCT 59.358 55.000 0.00 0.00 0.00 2.90
3277 3326 1.518302 GAACGAGCTCTTCCCCCTC 59.482 63.158 12.85 0.00 0.00 4.30
3280 3329 2.509561 GCGAACGAGCTCTTCCCC 60.510 66.667 12.85 4.34 0.00 4.81
3309 3358 2.086869 CTTTCTCCCAATGACACGCAT 58.913 47.619 0.00 0.00 39.43 4.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.