Multiple sequence alignment - TraesCS6B01G206100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G206100 chr6B 100.000 7102 0 0 1 7102 258756332 258763433 0.000000e+00 13116.0
1 TraesCS6B01G206100 chr6B 78.442 385 58 8 301 665 547653521 547653142 1.990000e-55 228.0
2 TraesCS6B01G206100 chr6A 90.189 4291 250 65 2869 7094 200946857 200951041 0.000000e+00 5433.0
3 TraesCS6B01G206100 chr6A 90.954 1426 109 8 1 1411 200944660 200946080 0.000000e+00 1901.0
4 TraesCS6B01G206100 chr6A 87.781 401 41 3 2470 2862 200946340 200946740 5.020000e-126 462.0
5 TraesCS6B01G206100 chr6A 94.853 272 12 1 1410 1679 200946032 200946303 2.370000e-114 424.0
6 TraesCS6B01G206100 chr6D 90.796 4031 235 54 2869 6835 144606410 144610368 0.000000e+00 5264.0
7 TraesCS6B01G206100 chr6D 93.230 842 44 8 580 1411 144604795 144605633 0.000000e+00 1227.0
8 TraesCS6B01G206100 chr6D 84.743 603 60 6 1 586 144602576 144603163 6.180000e-160 575.0
9 TraesCS6B01G206100 chr6D 88.119 404 40 3 2470 2865 144605893 144606296 2.320000e-129 473.0
10 TraesCS6B01G206100 chr6D 92.647 272 18 1 1410 1679 144605585 144605856 2.400000e-104 390.0
11 TraesCS6B01G206100 chr6D 92.975 242 17 0 6853 7094 144610627 144610868 3.150000e-93 353.0
12 TraesCS6B01G206100 chr6D 94.253 87 5 0 6749 6835 144610402 144610488 4.470000e-27 134.0
13 TraesCS6B01G206100 chr6D 78.571 182 27 7 498 667 66097472 66097291 7.530000e-20 110.0
14 TraesCS6B01G206100 chr6D 90.476 42 4 0 623 664 455803792 455803833 1.000000e-03 56.5
15 TraesCS6B01G206100 chr4A 94.118 731 29 7 1742 2459 652856388 652855659 0.000000e+00 1099.0
16 TraesCS6B01G206100 chr4A 93.857 407 19 3 1742 2148 412311425 412311825 6.090000e-170 608.0
17 TraesCS6B01G206100 chr4B 93.880 719 20 8 1742 2459 119278046 119277351 0.000000e+00 1062.0
18 TraesCS6B01G206100 chr4B 93.472 674 32 7 1759 2428 407061614 407062279 0.000000e+00 990.0
19 TraesCS6B01G206100 chr2B 91.327 761 24 5 1742 2460 472898244 472897484 0.000000e+00 1002.0
20 TraesCS6B01G206100 chr2B 87.377 713 41 20 1744 2456 715527345 715528008 0.000000e+00 773.0
21 TraesCS6B01G206100 chr2B 80.189 106 19 1 470 573 783235746 783235641 2.120000e-10 78.7
22 TraesCS6B01G206100 chr2B 78.505 107 20 2 470 573 782730139 782730033 4.600000e-07 67.6
23 TraesCS6B01G206100 chr3B 89.093 706 27 17 1740 2433 823076287 823075620 0.000000e+00 832.0
24 TraesCS6B01G206100 chr3B 98.113 53 1 0 2398 2450 763197510 763197458 7.590000e-15 93.5
25 TraesCS6B01G206100 chr3B 96.226 53 2 0 2398 2450 81167686 81167738 3.530000e-13 87.9
26 TraesCS6B01G206100 chr3B 96.226 53 2 0 2398 2450 829790563 829790615 3.530000e-13 87.9
27 TraesCS6B01G206100 chr7B 87.954 689 32 12 1742 2428 158182066 158182705 0.000000e+00 765.0
28 TraesCS6B01G206100 chr7B 88.943 407 18 11 1742 2148 346672581 346672960 1.790000e-130 477.0
29 TraesCS6B01G206100 chr7B 85.321 436 30 20 1997 2423 565580882 565580472 3.060000e-113 420.0
30 TraesCS6B01G206100 chr7B 75.980 587 117 11 11 580 504183509 504184088 1.510000e-71 281.0
31 TraesCS6B01G206100 chrUn 100.000 407 0 0 6023 6429 477993011 477992605 0.000000e+00 752.0
32 TraesCS6B01G206100 chr1D 82.641 674 96 6 2 660 425563503 425564170 1.720000e-160 577.0
33 TraesCS6B01G206100 chr1D 80.764 681 101 11 1 664 98135901 98136568 8.220000e-139 505.0
34 TraesCS6B01G206100 chr1D 83.658 514 63 6 1 498 7377090 7376582 1.400000e-126 464.0
35 TraesCS6B01G206100 chr7D 83.548 620 73 9 4 607 474354825 474355431 2.900000e-153 553.0
36 TraesCS6B01G206100 chr7D 82.343 623 80 13 1 607 497565698 497566306 1.370000e-141 514.0
37 TraesCS6B01G206100 chr7D 87.162 148 18 1 428 575 53631265 53631411 4.410000e-37 167.0
38 TraesCS6B01G206100 chr5B 88.479 434 33 8 1759 2176 700577705 700577273 6.360000e-140 508.0
39 TraesCS6B01G206100 chr5B 84.009 469 60 13 2 461 508784631 508785093 3.040000e-118 436.0
40 TraesCS6B01G206100 chr5A 81.587 630 96 6 1 612 582953528 582954155 2.960000e-138 503.0
41 TraesCS6B01G206100 chr2A 79.365 693 104 16 1 660 745404385 745403699 1.090000e-122 451.0
42 TraesCS6B01G206100 chr2A 80.000 170 33 1 6691 6859 17623217 17623386 2.690000e-24 124.0
43 TraesCS6B01G206100 chr5D 87.831 378 24 12 2038 2400 302330127 302330497 2.370000e-114 424.0
44 TraesCS6B01G206100 chr5D 92.369 249 18 1 1742 1990 302329522 302329769 3.150000e-93 353.0
45 TraesCS6B01G206100 chr3A 77.583 629 123 9 1 615 378338822 378339446 1.460000e-96 364.0
46 TraesCS6B01G206100 chr2D 79.962 524 74 6 101 607 106229756 106230265 2.440000e-94 357.0
47 TraesCS6B01G206100 chr2D 87.027 185 24 0 428 612 481061673 481061857 7.220000e-50 209.0
48 TraesCS6B01G206100 chr7A 78.311 438 82 10 180 612 515753735 515754164 3.260000e-68 270.0
49 TraesCS6B01G206100 chr1A 95.238 147 5 1 2289 2433 41716220 41716074 1.540000e-56 231.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G206100 chr6B 258756332 258763433 7101 False 13116.000000 13116 100.000000 1 7102 1 chr6B.!!$F1 7101
1 TraesCS6B01G206100 chr6A 200944660 200951041 6381 False 2055.000000 5433 90.944250 1 7094 4 chr6A.!!$F1 7093
2 TraesCS6B01G206100 chr6D 144602576 144610868 8292 False 1202.285714 5264 90.966143 1 7094 7 chr6D.!!$F2 7093
3 TraesCS6B01G206100 chr4A 652855659 652856388 729 True 1099.000000 1099 94.118000 1742 2459 1 chr4A.!!$R1 717
4 TraesCS6B01G206100 chr4B 119277351 119278046 695 True 1062.000000 1062 93.880000 1742 2459 1 chr4B.!!$R1 717
5 TraesCS6B01G206100 chr4B 407061614 407062279 665 False 990.000000 990 93.472000 1759 2428 1 chr4B.!!$F1 669
6 TraesCS6B01G206100 chr2B 472897484 472898244 760 True 1002.000000 1002 91.327000 1742 2460 1 chr2B.!!$R1 718
7 TraesCS6B01G206100 chr2B 715527345 715528008 663 False 773.000000 773 87.377000 1744 2456 1 chr2B.!!$F1 712
8 TraesCS6B01G206100 chr3B 823075620 823076287 667 True 832.000000 832 89.093000 1740 2433 1 chr3B.!!$R2 693
9 TraesCS6B01G206100 chr7B 158182066 158182705 639 False 765.000000 765 87.954000 1742 2428 1 chr7B.!!$F1 686
10 TraesCS6B01G206100 chr7B 504183509 504184088 579 False 281.000000 281 75.980000 11 580 1 chr7B.!!$F3 569
11 TraesCS6B01G206100 chr1D 425563503 425564170 667 False 577.000000 577 82.641000 2 660 1 chr1D.!!$F2 658
12 TraesCS6B01G206100 chr1D 98135901 98136568 667 False 505.000000 505 80.764000 1 664 1 chr1D.!!$F1 663
13 TraesCS6B01G206100 chr1D 7376582 7377090 508 True 464.000000 464 83.658000 1 498 1 chr1D.!!$R1 497
14 TraesCS6B01G206100 chr7D 474354825 474355431 606 False 553.000000 553 83.548000 4 607 1 chr7D.!!$F2 603
15 TraesCS6B01G206100 chr7D 497565698 497566306 608 False 514.000000 514 82.343000 1 607 1 chr7D.!!$F3 606
16 TraesCS6B01G206100 chr5A 582953528 582954155 627 False 503.000000 503 81.587000 1 612 1 chr5A.!!$F1 611
17 TraesCS6B01G206100 chr2A 745403699 745404385 686 True 451.000000 451 79.365000 1 660 1 chr2A.!!$R1 659
18 TraesCS6B01G206100 chr5D 302329522 302330497 975 False 388.500000 424 90.100000 1742 2400 2 chr5D.!!$F1 658
19 TraesCS6B01G206100 chr3A 378338822 378339446 624 False 364.000000 364 77.583000 1 615 1 chr3A.!!$F1 614
20 TraesCS6B01G206100 chr2D 106229756 106230265 509 False 357.000000 357 79.962000 101 607 1 chr2D.!!$F1 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
935 2655 0.030297 AGCTCCATCACCATCTCCCT 60.030 55.0 0.00 0.0 0.00 4.20 F
2695 4852 0.179140 CCTCTCTGCGTCTCTTGCTC 60.179 60.0 0.00 0.0 0.00 4.26 F
2888 5158 0.179234 TTCGCTCGCAATTATCCCCA 59.821 50.0 0.00 0.0 0.00 4.96 F
2891 5161 0.242017 GCTCGCAATTATCCCCATGC 59.758 55.0 0.00 0.0 35.49 4.06 F
4813 7116 0.038166 AATGGCCAGTGTCAATCCGT 59.962 50.0 13.05 0.0 0.00 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2825 4986 0.033504 TCAACCCACTCGTTGCTCTC 59.966 55.0 0.00 0.00 42.37 3.20 R
4679 6982 0.037303 AGCATGGAGGGGCATATTCG 59.963 55.0 0.00 0.00 0.00 3.34 R
4811 7114 0.030101 GAGGCAGCTAGCTCTACACG 59.970 60.0 16.15 3.40 44.79 4.49 R
4833 7136 1.086696 GTACGCTGTGCATGACCAAT 58.913 50.0 0.00 0.00 0.00 3.16 R
6765 9104 0.108186 TCACGGAACATGGCTAGCAG 60.108 55.0 18.24 8.28 0.00 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 0.179140 GGTGTCGGACGGCGTAATTA 60.179 55.000 14.74 0.00 0.00 1.40
152 153 1.593787 CGGCTGAGGAGAAAGCTGA 59.406 57.895 0.00 0.00 46.74 4.26
167 168 1.816537 CTGATCCACCACGTCCGAT 59.183 57.895 0.00 0.00 0.00 4.18
171 172 0.976073 ATCCACCACGTCCGATCCTT 60.976 55.000 0.00 0.00 0.00 3.36
173 174 1.516386 CACCACGTCCGATCCTTCG 60.516 63.158 0.00 0.00 45.08 3.79
272 289 1.421382 CAACCGACGAATTACACCGT 58.579 50.000 0.00 0.00 42.17 4.83
278 295 0.516877 ACGAATTACACCGTCGACGA 59.483 50.000 37.65 18.99 43.02 4.20
301 318 3.343421 GCGGACCGCGTCTTTGTT 61.343 61.111 25.24 0.00 44.55 2.83
351 368 2.838225 CGGCGGTGGATAGGGACT 60.838 66.667 0.00 0.00 46.37 3.85
626 2338 1.084289 GGACAATGGCCTGAACGTAC 58.916 55.000 3.32 0.00 0.00 3.67
650 2370 1.295746 GGGTTTGAGAGGTCCGGTC 59.704 63.158 0.00 0.00 0.00 4.79
660 2380 0.683504 AGGTCCGGTCGTAGATGCTT 60.684 55.000 0.00 0.00 40.67 3.91
668 2388 3.791887 CGGTCGTAGATGCTTTTACTCAG 59.208 47.826 0.00 0.00 40.67 3.35
670 2390 3.240861 GTCGTAGATGCTTTTACTCAGCG 59.759 47.826 0.00 0.00 40.45 5.18
671 2391 2.535984 CGTAGATGCTTTTACTCAGCGG 59.464 50.000 0.00 0.00 40.45 5.52
689 2409 0.034616 GGAGCCAGATCTTGATCCGG 59.965 60.000 14.67 8.18 0.00 5.14
935 2655 0.030297 AGCTCCATCACCATCTCCCT 60.030 55.000 0.00 0.00 0.00 4.20
943 2663 0.622665 CACCATCTCCCTCCTGCTTT 59.377 55.000 0.00 0.00 0.00 3.51
959 2679 1.134788 GCTTTCTTCCTCGGATCGGAA 60.135 52.381 4.39 2.69 38.18 4.30
1109 2830 2.796483 TTCTTCACCCCCATGCGTCG 62.796 60.000 0.00 0.00 0.00 5.12
1111 2832 3.185299 TTCACCCCCATGCGTCGTT 62.185 57.895 0.00 0.00 0.00 3.85
1212 2933 1.367471 CGTTGCACTGGACTGGAGA 59.633 57.895 0.00 0.00 0.00 3.71
1247 2968 3.471680 GAGCAGGACTGTTTTCTTCAGT 58.528 45.455 0.82 0.00 46.86 3.41
1283 3004 1.941668 GCTTGCTCGGAGTTAGTTGCT 60.942 52.381 6.90 0.00 0.00 3.91
1288 3009 3.003480 GCTCGGAGTTAGTTGCTGATTT 58.997 45.455 6.90 0.00 0.00 2.17
1289 3010 4.181578 GCTCGGAGTTAGTTGCTGATTTA 58.818 43.478 6.90 0.00 0.00 1.40
1290 3011 4.033014 GCTCGGAGTTAGTTGCTGATTTAC 59.967 45.833 6.90 0.00 0.00 2.01
1319 3040 1.464734 TCGCTGTTTCTCTCCGATCT 58.535 50.000 0.00 0.00 0.00 2.75
1361 3082 4.598022 TCATGGTTTTGTATGATGCCTGA 58.402 39.130 0.00 0.00 0.00 3.86
1402 3123 3.545822 GCTGTTTGTTTCCCGCAATTTTG 60.546 43.478 0.00 0.00 0.00 2.44
1417 3138 5.824904 CAATTTTGCTGCTATGGAGTAGT 57.175 39.130 0.00 0.00 37.70 2.73
1418 3139 6.925610 CAATTTTGCTGCTATGGAGTAGTA 57.074 37.500 0.00 0.00 37.70 1.82
1419 3140 7.320443 CAATTTTGCTGCTATGGAGTAGTAA 57.680 36.000 0.00 0.00 38.03 2.24
1420 3141 7.934457 CAATTTTGCTGCTATGGAGTAGTAAT 58.066 34.615 0.00 0.00 39.16 1.89
1421 3142 9.056005 CAATTTTGCTGCTATGGAGTAGTAATA 57.944 33.333 0.00 0.00 39.16 0.98
1422 3143 8.608844 ATTTTGCTGCTATGGAGTAGTAATAC 57.391 34.615 0.00 0.00 39.16 1.89
1423 3144 6.724893 TTGCTGCTATGGAGTAGTAATACA 57.275 37.500 2.81 0.00 35.62 2.29
1424 3145 6.918067 TGCTGCTATGGAGTAGTAATACAT 57.082 37.500 0.24 0.24 37.70 2.29
1425 3146 7.303182 TGCTGCTATGGAGTAGTAATACATT 57.697 36.000 0.00 0.00 37.70 2.71
1426 3147 8.417273 TGCTGCTATGGAGTAGTAATACATTA 57.583 34.615 0.00 0.00 37.70 1.90
1427 3148 8.523658 TGCTGCTATGGAGTAGTAATACATTAG 58.476 37.037 0.00 0.00 37.70 1.73
1428 3149 7.489757 GCTGCTATGGAGTAGTAATACATTAGC 59.510 40.741 0.00 8.50 37.70 3.09
1429 3150 8.651589 TGCTATGGAGTAGTAATACATTAGCT 57.348 34.615 17.43 0.00 32.72 3.32
1430 3151 8.523658 TGCTATGGAGTAGTAATACATTAGCTG 58.476 37.037 17.43 0.00 32.72 4.24
1431 3152 8.524487 GCTATGGAGTAGTAATACATTAGCTGT 58.476 37.037 0.00 0.00 35.98 4.40
1435 3156 9.417561 TGGAGTAGTAATACATTAGCTGTTAGT 57.582 33.333 2.81 0.00 39.39 2.24
1440 3161 8.959705 AGTAATACATTAGCTGTTAGTTTCCC 57.040 34.615 0.00 0.00 39.39 3.97
1441 3162 6.920569 AATACATTAGCTGTTAGTTTCCCG 57.079 37.500 0.00 0.00 39.39 5.14
1442 3163 3.007635 ACATTAGCTGTTAGTTTCCCGC 58.992 45.455 0.00 0.00 32.90 6.13
1443 3164 2.843401 TTAGCTGTTAGTTTCCCGCA 57.157 45.000 0.00 0.00 0.00 5.69
1444 3165 2.843401 TAGCTGTTAGTTTCCCGCAA 57.157 45.000 0.00 0.00 0.00 4.85
1445 3166 2.200373 AGCTGTTAGTTTCCCGCAAT 57.800 45.000 0.00 0.00 0.00 3.56
1446 3167 2.514803 AGCTGTTAGTTTCCCGCAATT 58.485 42.857 0.00 0.00 0.00 2.32
1447 3168 2.890945 AGCTGTTAGTTTCCCGCAATTT 59.109 40.909 0.00 0.00 0.00 1.82
1448 3169 3.320826 AGCTGTTAGTTTCCCGCAATTTT 59.679 39.130 0.00 0.00 0.00 1.82
1591 3312 1.073722 CAGGCAGCAAGGTGAGGAA 59.926 57.895 3.05 0.00 0.00 3.36
1608 3329 1.700186 GGAAACTGACCTCCCAAGTCT 59.300 52.381 0.00 0.00 35.21 3.24
1611 3332 1.638529 ACTGACCTCCCAAGTCTCTG 58.361 55.000 0.00 0.00 35.21 3.35
1616 3337 2.834549 GACCTCCCAAGTCTCTGATTCA 59.165 50.000 0.00 0.00 0.00 2.57
1633 3356 5.795972 TGATTCAACTGTATTCGGTACCAA 58.204 37.500 13.54 5.98 32.25 3.67
1639 3362 5.217978 ACTGTATTCGGTACCAACAAGAA 57.782 39.130 13.54 7.17 32.03 2.52
1643 3366 5.821470 TGTATTCGGTACCAACAAGAACAAA 59.179 36.000 13.54 0.00 32.03 2.83
1652 3375 3.181477 CCAACAAGAACAAATGGCAGTGA 60.181 43.478 7.87 0.00 0.00 3.41
1679 3402 5.178996 CACAGCATTTCAGTATCCTAGCATC 59.821 44.000 0.00 0.00 0.00 3.91
1680 3403 5.071519 ACAGCATTTCAGTATCCTAGCATCT 59.928 40.000 0.00 0.00 0.00 2.90
1681 3404 5.408909 CAGCATTTCAGTATCCTAGCATCTG 59.591 44.000 0.00 0.00 0.00 2.90
1682 3405 5.071519 AGCATTTCAGTATCCTAGCATCTGT 59.928 40.000 0.00 0.00 0.00 3.41
1684 3407 6.589523 GCATTTCAGTATCCTAGCATCTGTAG 59.410 42.308 0.00 0.00 0.00 2.74
1686 3409 8.797438 CATTTCAGTATCCTAGCATCTGTAGTA 58.203 37.037 0.00 0.00 0.00 1.82
1687 3410 8.941995 TTTCAGTATCCTAGCATCTGTAGTAT 57.058 34.615 0.00 0.00 0.00 2.12
1688 3411 7.929941 TCAGTATCCTAGCATCTGTAGTATG 57.070 40.000 0.00 0.00 0.00 2.39
1689 3412 7.462590 TCAGTATCCTAGCATCTGTAGTATGT 58.537 38.462 0.00 0.00 0.00 2.29
1690 3413 7.391833 TCAGTATCCTAGCATCTGTAGTATGTG 59.608 40.741 0.00 0.00 0.00 3.21
1691 3414 7.175816 CAGTATCCTAGCATCTGTAGTATGTGT 59.824 40.741 0.00 0.00 0.00 3.72
1692 3415 8.383947 AGTATCCTAGCATCTGTAGTATGTGTA 58.616 37.037 0.00 0.00 0.00 2.90
1693 3416 9.179909 GTATCCTAGCATCTGTAGTATGTGTAT 57.820 37.037 0.00 0.00 0.00 2.29
1695 3418 8.794335 TCCTAGCATCTGTAGTATGTGTATAG 57.206 38.462 0.00 0.00 0.00 1.31
1696 3419 8.603304 TCCTAGCATCTGTAGTATGTGTATAGA 58.397 37.037 0.00 0.00 0.00 1.98
1697 3420 9.232473 CCTAGCATCTGTAGTATGTGTATAGAA 57.768 37.037 0.00 0.00 0.00 2.10
1724 3447 8.710835 TTGCTATGTTAGTATGTTTTCATCGA 57.289 30.769 0.00 0.00 41.25 3.59
1727 3450 7.166970 GCTATGTTAGTATGTTTTCATCGACGA 59.833 37.037 0.00 0.00 41.25 4.20
1728 3451 7.821595 ATGTTAGTATGTTTTCATCGACGAA 57.178 32.000 0.00 0.00 41.25 3.85
1738 3461 4.678509 TTCATCGACGAAAGGAATTTGG 57.321 40.909 0.00 0.00 0.00 3.28
1913 3637 5.139727 TGTTCTTGAGTGGTTCCAATTCAT 58.860 37.500 7.71 0.00 0.00 2.57
1990 3734 0.555769 AGACCACCACCACCAACAAT 59.444 50.000 0.00 0.00 0.00 2.71
2003 3756 4.098654 CCACCAACAATAACAACAACCAGA 59.901 41.667 0.00 0.00 0.00 3.86
2030 3783 1.986757 GGAGGAGCAGACCAGCAGA 60.987 63.158 0.00 0.00 36.85 4.26
2080 4123 4.052229 CCAGCAGCAGCAACCAGC 62.052 66.667 3.17 0.00 45.49 4.85
2107 4219 1.078567 GGAGGAGCAGACCAGCAAG 60.079 63.158 0.00 0.00 36.85 4.01
2126 4241 3.650950 GCAGCAACCAGGGGAGGA 61.651 66.667 0.00 0.00 0.00 3.71
2127 4242 2.673523 CAGCAACCAGGGGAGGAG 59.326 66.667 0.00 0.00 0.00 3.69
2128 4243 3.334054 AGCAACCAGGGGAGGAGC 61.334 66.667 0.00 0.00 34.86 4.70
2129 4244 3.650950 GCAACCAGGGGAGGAGCA 61.651 66.667 0.00 0.00 34.80 4.26
2130 4245 2.673523 CAACCAGGGGAGGAGCAG 59.326 66.667 0.00 0.00 0.00 4.24
2131 4246 1.920325 CAACCAGGGGAGGAGCAGA 60.920 63.158 0.00 0.00 0.00 4.26
2132 4247 1.920835 AACCAGGGGAGGAGCAGAC 60.921 63.158 0.00 0.00 0.00 3.51
2133 4248 3.086600 CCAGGGGAGGAGCAGACC 61.087 72.222 0.00 0.00 0.00 3.85
2134 4249 2.284921 CAGGGGAGGAGCAGACCA 60.285 66.667 0.00 0.00 0.00 4.02
2135 4250 2.040278 AGGGGAGGAGCAGACCAG 59.960 66.667 0.00 0.00 0.00 4.00
2136 4251 3.791586 GGGGAGGAGCAGACCAGC 61.792 72.222 0.00 0.00 0.00 4.85
2137 4252 3.005539 GGGAGGAGCAGACCAGCA 61.006 66.667 0.00 0.00 36.85 4.41
2138 4253 2.583520 GGAGGAGCAGACCAGCAG 59.416 66.667 0.00 0.00 36.85 4.24
2139 4254 2.125188 GAGGAGCAGACCAGCAGC 60.125 66.667 0.00 0.00 36.85 5.25
2140 4255 2.926779 AGGAGCAGACCAGCAGCA 60.927 61.111 0.00 0.00 36.85 4.41
2141 4256 2.436292 GGAGCAGACCAGCAGCAG 60.436 66.667 0.00 0.00 36.85 4.24
2142 4257 3.126225 GAGCAGACCAGCAGCAGC 61.126 66.667 0.00 0.00 42.56 5.25
2143 4258 3.896356 GAGCAGACCAGCAGCAGCA 62.896 63.158 3.17 0.00 45.49 4.41
2144 4259 2.981909 GCAGACCAGCAGCAGCAA 60.982 61.111 3.17 0.00 45.49 3.91
2145 4260 2.952245 CAGACCAGCAGCAGCAAC 59.048 61.111 3.17 0.00 45.49 4.17
2146 4261 2.282040 AGACCAGCAGCAGCAACC 60.282 61.111 3.17 0.00 45.49 3.77
2147 4262 2.595463 GACCAGCAGCAGCAACCA 60.595 61.111 3.17 0.00 45.49 3.67
2148 4263 2.596631 ACCAGCAGCAGCAACCAG 60.597 61.111 3.17 0.00 45.49 4.00
2149 4264 3.371063 CCAGCAGCAGCAACCAGG 61.371 66.667 3.17 0.00 45.49 4.45
2150 4265 3.371063 CAGCAGCAGCAACCAGGG 61.371 66.667 3.17 0.00 45.49 4.45
2151 4266 3.573229 AGCAGCAGCAACCAGGGA 61.573 61.111 3.17 0.00 45.49 4.20
2152 4267 2.598394 GCAGCAGCAACCAGGGAA 60.598 61.111 0.00 0.00 41.58 3.97
2153 4268 2.633509 GCAGCAGCAACCAGGGAAG 61.634 63.158 0.00 0.00 41.58 3.46
2154 4269 1.975407 CAGCAGCAACCAGGGAAGG 60.975 63.158 0.00 0.00 0.00 3.46
2176 4291 0.607489 CAGCAAGCCAGCAACTAGGT 60.607 55.000 0.00 0.00 36.85 3.08
2210 4326 1.152096 AAGGAGAGGGTTGGGTCGT 60.152 57.895 0.00 0.00 0.00 4.34
2456 4609 2.034179 TCGAGCGACTCAAAAACAGAGA 59.966 45.455 7.47 0.00 36.91 3.10
2460 4613 5.100751 AGCGACTCAAAAACAGAGATTTG 57.899 39.130 0.00 0.00 37.77 2.32
2461 4614 4.023707 AGCGACTCAAAAACAGAGATTTGG 60.024 41.667 0.00 0.00 37.19 3.28
2462 4615 4.261197 GCGACTCAAAAACAGAGATTTGGT 60.261 41.667 0.00 0.00 37.19 3.67
2463 4616 5.444122 CGACTCAAAAACAGAGATTTGGTC 58.556 41.667 0.00 0.00 37.19 4.02
2464 4617 5.237344 CGACTCAAAAACAGAGATTTGGTCT 59.763 40.000 0.00 0.00 40.81 3.85
2465 4618 6.382869 ACTCAAAAACAGAGATTTGGTCTG 57.617 37.500 0.00 0.00 45.94 3.51
2466 4619 5.186996 TCAAAAACAGAGATTTGGTCTGC 57.813 39.130 0.00 0.00 44.60 4.26
2467 4620 4.889409 TCAAAAACAGAGATTTGGTCTGCT 59.111 37.500 0.00 0.00 44.60 4.24
2468 4621 5.009010 TCAAAAACAGAGATTTGGTCTGCTC 59.991 40.000 0.00 0.00 44.60 4.26
2474 4627 5.218885 CAGAGATTTGGTCTGCTCGTATAG 58.781 45.833 0.00 0.00 37.29 1.31
2475 4628 4.279671 AGAGATTTGGTCTGCTCGTATAGG 59.720 45.833 0.00 0.00 37.29 2.57
2500 4653 4.626287 GCCTGATGTAATGACTGGAAGGAA 60.626 45.833 0.00 0.00 39.30 3.36
2542 4695 1.084289 GGGCCACTGAACAATACGTC 58.916 55.000 4.39 0.00 0.00 4.34
2546 4699 2.092211 GCCACTGAACAATACGTCTTCG 59.908 50.000 0.00 0.00 43.34 3.79
2551 4704 2.984471 TGAACAATACGTCTTCGAGCAC 59.016 45.455 0.00 0.00 40.62 4.40
2556 4709 3.438088 CGTCTTCGAGCACGTGAC 58.562 61.111 22.23 10.94 40.69 3.67
2611 4765 2.907910 GCATGAGCAGGTGTTGTTAG 57.092 50.000 0.00 0.00 41.58 2.34
2625 4782 9.316730 CAGGTGTTGTTAGTAACTAACTTGTAA 57.683 33.333 14.00 0.00 44.49 2.41
2628 4785 9.097257 GTGTTGTTAGTAACTAACTTGTAACCA 57.903 33.333 14.00 0.00 44.49 3.67
2645 4802 2.050144 ACCAGGAGATCGGCATGTATT 58.950 47.619 0.00 0.00 0.00 1.89
2652 4809 4.756642 GGAGATCGGCATGTATTGAATGAA 59.243 41.667 0.00 0.00 0.00 2.57
2684 4841 2.999331 ACTCTACTCTGTCCTCTCTGC 58.001 52.381 0.00 0.00 0.00 4.26
2691 4848 1.173043 CTGTCCTCTCTGCGTCTCTT 58.827 55.000 0.00 0.00 0.00 2.85
2695 4852 0.179140 CCTCTCTGCGTCTCTTGCTC 60.179 60.000 0.00 0.00 0.00 4.26
2704 4861 2.704572 CGTCTCTTGCTCCCTCATTTT 58.295 47.619 0.00 0.00 0.00 1.82
2709 4866 3.149196 TCTTGCTCCCTCATTTTGTGAC 58.851 45.455 0.00 0.00 32.22 3.67
2716 4873 3.068024 TCCCTCATTTTGTGACAAGTTGC 59.932 43.478 1.81 0.00 32.22 4.17
2726 4883 3.115554 GTGACAAGTTGCATCCACAAAC 58.884 45.455 1.81 0.00 0.00 2.93
2732 4889 2.699846 AGTTGCATCCACAAACAACCAT 59.300 40.909 0.00 0.00 42.61 3.55
2735 4892 1.940752 GCATCCACAAACAACCATGGC 60.941 52.381 13.04 0.00 31.87 4.40
2737 4894 1.039068 TCCACAAACAACCATGGCTG 58.961 50.000 13.04 13.43 31.87 4.85
2784 4945 5.675684 TCTGTATCAAGTCAGGCATTACA 57.324 39.130 0.00 0.00 33.13 2.41
2789 4950 4.350368 TCAAGTCAGGCATTACAACTGA 57.650 40.909 0.00 0.00 38.80 3.41
2803 4964 7.518848 GCATTACAACTGATATCAGATTTGCGA 60.519 37.037 34.16 20.74 46.59 5.10
2811 4972 6.162079 TGATATCAGATTTGCGAGATTCTCC 58.838 40.000 0.00 2.20 0.00 3.71
2837 4998 1.205893 GGGATGAAGAGAGCAACGAGT 59.794 52.381 0.00 0.00 0.00 4.18
2852 5013 1.068741 ACGAGTGGGTTGAGTTCTCAC 59.931 52.381 1.72 0.00 0.00 3.51
2853 5014 1.605712 CGAGTGGGTTGAGTTCTCACC 60.606 57.143 1.72 7.28 0.00 4.02
2865 5026 5.805728 TGAGTTCTCACCTAAAATTCCTCC 58.194 41.667 0.00 0.00 0.00 4.30
2869 5139 4.094476 TCTCACCTAAAATTCCTCCTCGT 58.906 43.478 0.00 0.00 0.00 4.18
2871 5141 4.828829 TCACCTAAAATTCCTCCTCGTTC 58.171 43.478 0.00 0.00 0.00 3.95
2878 5148 4.116328 CCTCCTCGTTCGCTCGCA 62.116 66.667 0.00 0.00 0.00 5.10
2884 5154 1.190323 CCTCGTTCGCTCGCAATTATC 59.810 52.381 0.00 0.00 0.00 1.75
2888 5158 0.179234 TTCGCTCGCAATTATCCCCA 59.821 50.000 0.00 0.00 0.00 4.96
2891 5161 0.242017 GCTCGCAATTATCCCCATGC 59.758 55.000 0.00 0.00 35.49 4.06
2892 5162 1.608055 CTCGCAATTATCCCCATGCA 58.392 50.000 0.00 0.00 38.69 3.96
2905 5175 2.770802 CCCCATGCATGGTAAAATTCCA 59.229 45.455 37.30 0.00 46.65 3.53
2911 5181 3.323115 TGCATGGTAAAATTCCAGTTGCA 59.677 39.130 8.22 8.22 43.85 4.08
2913 5184 4.937015 GCATGGTAAAATTCCAGTTGCATT 59.063 37.500 0.00 0.00 39.40 3.56
2931 5202 5.911752 TGCATTACAAGATTTGTGTGGTTT 58.088 33.333 4.78 0.00 45.03 3.27
2933 5204 6.920758 TGCATTACAAGATTTGTGTGGTTTAC 59.079 34.615 4.78 0.00 45.03 2.01
2935 5206 4.561735 ACAAGATTTGTGTGGTTTACGG 57.438 40.909 0.00 0.00 43.48 4.02
2936 5207 3.949113 ACAAGATTTGTGTGGTTTACGGT 59.051 39.130 0.00 0.00 43.48 4.83
2942 5213 0.464193 GTGTGGTTTACGGTGGTGGT 60.464 55.000 0.00 0.00 0.00 4.16
2943 5214 0.464013 TGTGGTTTACGGTGGTGGTG 60.464 55.000 0.00 0.00 0.00 4.17
2965 5236 4.202451 TGTGAGTTGATTGGGAGATGAACA 60.202 41.667 0.00 0.00 0.00 3.18
2967 5238 3.944015 GAGTTGATTGGGAGATGAACAGG 59.056 47.826 0.00 0.00 0.00 4.00
2981 5253 3.244582 TGAACAGGTTCCTGGCTAAGTA 58.755 45.455 20.88 0.41 38.77 2.24
2995 5267 3.382865 GGCTAAGTAGTAAGTAGGCGGTT 59.617 47.826 0.75 0.00 31.71 4.44
3046 5318 1.383523 GTGCTACATCCAGGCCTTTC 58.616 55.000 0.00 0.00 0.00 2.62
3066 5338 7.682021 GCCTTTCATTGGTTGTCATAACCTATC 60.682 40.741 4.76 0.00 40.88 2.08
3124 5396 6.161855 TGTATATGGTGGAGCTAGAACAAG 57.838 41.667 0.00 0.00 0.00 3.16
3126 5398 3.618690 ATGGTGGAGCTAGAACAAGTC 57.381 47.619 0.00 0.00 0.00 3.01
3128 5400 2.703536 TGGTGGAGCTAGAACAAGTCAA 59.296 45.455 0.00 0.00 0.00 3.18
3163 5438 6.998074 TGAACTTGAGGATTGCGGAATATATT 59.002 34.615 0.71 0.00 0.00 1.28
3317 5592 6.374053 TCGATTGATATTCTTGTTGGCTTTCA 59.626 34.615 0.00 0.00 0.00 2.69
3318 5593 7.067372 TCGATTGATATTCTTGTTGGCTTTCAT 59.933 33.333 0.00 0.00 0.00 2.57
3319 5594 7.377928 CGATTGATATTCTTGTTGGCTTTCATC 59.622 37.037 0.00 0.00 0.00 2.92
3320 5595 6.122850 TGATATTCTTGTTGGCTTTCATCG 57.877 37.500 0.00 0.00 0.00 3.84
3352 5627 5.590530 TGAGCTTGGTGTTTTTGTTATGT 57.409 34.783 0.00 0.00 0.00 2.29
3363 5642 6.141685 GTGTTTTTGTTATGTTCAGGTAAGCG 59.858 38.462 0.00 0.00 0.00 4.68
3384 5663 4.226761 CGAAAAGGTTTTAGTGCATGGTC 58.773 43.478 0.00 0.00 0.00 4.02
3422 5701 2.089408 TCCCATGGTCCCATCTATTCCT 60.089 50.000 11.73 0.00 33.90 3.36
3444 5723 7.826690 TCCTAAAAGGCAGTATCAAACATTTC 58.173 34.615 0.00 0.00 34.61 2.17
3453 5732 6.337152 CAGTATCAAACATTTCGTCGTATCG 58.663 40.000 0.00 0.00 0.00 2.92
3468 5747 4.667061 GTCGTATCGAACTTCTCAGATTCG 59.333 45.833 4.31 4.31 45.07 3.34
3478 5757 6.471233 ACTTCTCAGATTCGATCCATTGTA 57.529 37.500 0.00 0.00 0.00 2.41
3495 5774 7.333323 TCCATTGTATCATATATCCACTGCAG 58.667 38.462 13.48 13.48 0.00 4.41
3513 5792 6.599244 CACTGCAGTGGATTCCTTTAATAGAA 59.401 38.462 34.65 0.00 42.10 2.10
3521 5800 9.832445 GTGGATTCCTTTAATAGAAGTACATCA 57.168 33.333 3.95 0.00 0.00 3.07
3540 5819 7.251704 ACATCATGGAAATGAATCGTAACTC 57.748 36.000 0.20 0.00 33.83 3.01
3543 5822 7.864108 TCATGGAAATGAATCGTAACTCATT 57.136 32.000 0.00 0.00 42.67 2.57
3572 5856 2.183679 TGTTTGTATGGGAAATGGGGC 58.816 47.619 0.00 0.00 0.00 5.80
3577 5861 1.828595 GTATGGGAAATGGGGCGTTTT 59.171 47.619 0.00 0.00 0.00 2.43
3591 5875 1.855978 GCGTTTTTACAAACCTGCCAC 59.144 47.619 0.00 0.00 39.43 5.01
3613 5897 1.879796 GCTCAGGGTGAGTTTGGTCTG 60.880 57.143 5.84 0.00 45.94 3.51
3619 5903 3.153919 GGGTGAGTTTGGTCTGCAAATA 58.846 45.455 0.00 0.00 0.00 1.40
3637 5921 5.345702 CAAATACTTGTGCTGGATTGATGG 58.654 41.667 0.00 0.00 0.00 3.51
3657 5941 2.033927 GGCTAAGCCTTAAGCAATGCTC 59.966 50.000 8.71 0.00 46.69 4.26
3669 5953 2.553602 AGCAATGCTCATTTGTCGTTGA 59.446 40.909 0.00 0.00 30.62 3.18
3683 5967 6.741992 TTGTCGTTGATTAGCAGATTCAAT 57.258 33.333 0.00 0.00 31.79 2.57
3687 5971 7.119699 TGTCGTTGATTAGCAGATTCAATCTTT 59.880 33.333 0.00 0.00 37.58 2.52
3708 5992 8.827177 TCTTTATTACTTGTACTGTGTTCCTG 57.173 34.615 0.00 0.00 0.00 3.86
3751 6035 8.405531 TGCAGATTTAGGCATAAAATGTACTTC 58.594 33.333 7.74 0.00 34.62 3.01
3756 6040 8.815565 TTTAGGCATAAAATGTACTTCCATCA 57.184 30.769 0.14 0.00 0.00 3.07
3767 6051 6.299805 TGTACTTCCATCACTAGATTTGCT 57.700 37.500 0.00 0.00 30.20 3.91
3773 6057 5.614308 TCCATCACTAGATTTGCTACATGG 58.386 41.667 0.00 0.00 32.08 3.66
3801 6085 0.325671 TCCATCTCTGGGGTGTCCTC 60.326 60.000 0.00 0.00 43.34 3.71
3802 6086 0.618680 CCATCTCTGGGGTGTCCTCA 60.619 60.000 0.00 0.00 39.04 3.86
3829 6115 9.796120 GTATATTAAATTTGCCACAGTTTGCTA 57.204 29.630 0.00 0.00 0.00 3.49
3869 6155 5.183904 CAGAAACTGGGAGGAAACATTTAGG 59.816 44.000 0.00 0.00 0.00 2.69
3881 6167 5.106830 GGAAACATTTAGGTTACACCGTGAG 60.107 44.000 5.28 0.00 44.90 3.51
3882 6168 4.612264 ACATTTAGGTTACACCGTGAGT 57.388 40.909 5.28 0.00 44.90 3.41
3883 6169 5.726980 ACATTTAGGTTACACCGTGAGTA 57.273 39.130 5.28 0.00 44.90 2.59
3884 6170 6.100404 ACATTTAGGTTACACCGTGAGTAA 57.900 37.500 5.28 0.00 44.90 2.24
3885 6171 6.704310 ACATTTAGGTTACACCGTGAGTAAT 58.296 36.000 5.28 0.00 44.90 1.89
3886 6172 6.592607 ACATTTAGGTTACACCGTGAGTAATG 59.407 38.462 5.28 7.39 44.90 1.90
3887 6173 2.968675 AGGTTACACCGTGAGTAATGC 58.031 47.619 5.28 0.00 44.90 3.56
3888 6174 2.004733 GGTTACACCGTGAGTAATGCC 58.995 52.381 5.28 0.00 34.34 4.40
3889 6175 1.657094 GTTACACCGTGAGTAATGCCG 59.343 52.381 5.28 0.00 34.34 5.69
3904 6190 9.203421 TGAGTAATGCCGTACATAATTTGATAG 57.797 33.333 0.00 0.00 38.34 2.08
4046 6332 5.664294 TCAATGAATGGCTTGCTGTTAAT 57.336 34.783 0.00 0.00 0.00 1.40
4098 6385 6.049149 CGTGACCCATACTTGACATATTTCT 58.951 40.000 0.00 0.00 0.00 2.52
4150 6445 9.920946 AATATTCTGTGGTTGGTACTGAATAAT 57.079 29.630 16.07 9.17 44.54 1.28
4152 6447 8.732746 ATTCTGTGGTTGGTACTGAATAATAC 57.267 34.615 8.01 0.00 41.70 1.89
4156 6451 6.113411 GTGGTTGGTACTGAATAATACTGCT 58.887 40.000 0.00 0.00 0.00 4.24
4157 6452 6.037172 GTGGTTGGTACTGAATAATACTGCTG 59.963 42.308 0.00 0.00 0.00 4.41
4198 6493 8.549338 AAACCAGTAAATTCACTAGAGCTAAC 57.451 34.615 0.00 0.00 0.00 2.34
4283 6578 1.707632 CAGAGTTCTGCACTTCCGAG 58.292 55.000 0.00 0.00 35.01 4.63
4316 6611 0.250727 TGACTGCAGGCCCAAAGTAC 60.251 55.000 19.23 0.00 0.00 2.73
4319 6614 2.359975 GCAGGCCCAAAGTACGCT 60.360 61.111 0.00 0.00 0.00 5.07
4322 6617 0.889186 CAGGCCCAAAGTACGCTTGT 60.889 55.000 0.00 0.00 34.71 3.16
4327 6622 2.159382 CCCAAAGTACGCTTGTCCATT 58.841 47.619 9.13 0.00 34.71 3.16
4329 6624 3.945285 CCCAAAGTACGCTTGTCCATTAT 59.055 43.478 9.13 0.00 34.71 1.28
4331 6626 5.105917 CCCAAAGTACGCTTGTCCATTATTT 60.106 40.000 9.13 0.00 34.71 1.40
4364 6660 7.227049 TGAACTTCTCAAAAAGGAACAAGTT 57.773 32.000 0.00 0.00 34.81 2.66
4369 6665 6.207691 TCTCAAAAAGGAACAAGTTGGAAG 57.792 37.500 7.96 0.00 0.00 3.46
4372 6668 2.755952 AAGGAACAAGTTGGAAGCCT 57.244 45.000 7.96 5.17 0.00 4.58
4464 6761 7.176515 CACCTAGTCATTATCTGCTGTAGATCT 59.823 40.741 11.63 0.00 42.54 2.75
4475 6772 8.885494 ATCTGCTGTAGATCTTCTAAATTGAC 57.115 34.615 0.00 0.00 42.54 3.18
4508 6805 9.871238 TTTTATAACTAGTGAAGGCTTCTACTG 57.129 33.333 27.62 21.89 0.00 2.74
4509 6806 8.818622 TTATAACTAGTGAAGGCTTCTACTGA 57.181 34.615 27.62 17.12 0.00 3.41
4557 6859 8.863049 CCATGTTTATGCTAAAAGCTTAACAAG 58.137 33.333 10.30 6.90 42.97 3.16
4562 6864 6.884280 ATGCTAAAAGCTTAACAAGTGACT 57.116 33.333 0.00 0.00 42.97 3.41
4591 6893 8.171400 TGGTGTCTTTAATTATTTCCCTAACCA 58.829 33.333 0.00 0.00 0.00 3.67
4613 6915 2.505819 TGCTCCCTCCATTCCTAAGAAC 59.494 50.000 0.00 0.00 33.97 3.01
4619 6921 2.939103 CTCCATTCCTAAGAACAAGGCG 59.061 50.000 0.00 0.00 33.97 5.52
4667 6970 1.150536 GGGTGCACTCCTGTTTCCA 59.849 57.895 17.98 0.00 0.00 3.53
4679 6982 4.906618 TCCTGTTTCCACTCTGATTTACC 58.093 43.478 0.00 0.00 0.00 2.85
4703 7006 4.437587 GCCCCTCCATGCTGCACT 62.438 66.667 3.57 0.00 0.00 4.40
4708 7011 2.045634 TCCATGCTGCACTCTGCC 60.046 61.111 3.57 0.00 44.23 4.85
4733 7036 3.941483 TCTAAAGACATGCTTGCCTTAGC 59.059 43.478 1.59 0.00 41.59 3.09
4746 7049 1.815003 GCCTTAGCTGCATTGTGAACT 59.185 47.619 1.02 0.00 35.50 3.01
4751 7054 0.594602 GCTGCATTGTGAACTGCTCA 59.405 50.000 0.00 0.00 39.16 4.26
4764 7067 1.834856 CTGCTCACCTCCTCTTGCCA 61.835 60.000 0.00 0.00 0.00 4.92
4811 7114 2.945668 GAGTAATGGCCAGTGTCAATCC 59.054 50.000 17.71 0.00 0.00 3.01
4813 7116 0.038166 AATGGCCAGTGTCAATCCGT 59.962 50.000 13.05 0.00 0.00 4.69
4825 7128 2.359531 GTCAATCCGTGTAGAGCTAGCT 59.640 50.000 19.45 19.45 0.00 3.32
4832 7135 1.754226 GTGTAGAGCTAGCTGCCTCTT 59.246 52.381 24.99 0.00 44.23 2.85
4833 7136 2.952978 GTGTAGAGCTAGCTGCCTCTTA 59.047 50.000 24.99 3.31 44.23 2.10
4838 7141 2.103941 GAGCTAGCTGCCTCTTATTGGT 59.896 50.000 24.99 0.00 44.23 3.67
4851 7154 2.682155 TATTGGTCATGCACAGCGTA 57.318 45.000 0.00 0.00 0.00 4.42
4852 7155 1.086696 ATTGGTCATGCACAGCGTAC 58.913 50.000 0.00 0.00 0.00 3.67
4853 7156 1.288419 TTGGTCATGCACAGCGTACG 61.288 55.000 11.84 11.84 0.00 3.67
4854 7157 1.736645 GGTCATGCACAGCGTACGT 60.737 57.895 17.90 0.00 0.00 3.57
4855 7158 1.416049 GTCATGCACAGCGTACGTG 59.584 57.895 17.90 15.47 37.43 4.49
4869 7172 3.504863 CGTACGTGGTGTGCTAATAACT 58.495 45.455 7.22 0.00 0.00 2.24
4876 7179 3.007940 TGGTGTGCTAATAACTGCTCAGT 59.992 43.478 0.00 0.00 44.94 3.41
4891 7194 3.070878 TGCTCAGTGTGTGATTTACCAGA 59.929 43.478 0.00 0.00 33.51 3.86
4904 7207 3.806949 TTACCAGAGGCAAAATGGTCT 57.193 42.857 5.51 0.00 43.94 3.85
4918 7221 7.923878 GGCAAAATGGTCTAAAACTTGTAAGAA 59.076 33.333 0.00 0.00 0.00 2.52
4919 7222 8.968242 GCAAAATGGTCTAAAACTTGTAAGAAG 58.032 33.333 0.00 0.00 0.00 2.85
4920 7223 8.968242 CAAAATGGTCTAAAACTTGTAAGAAGC 58.032 33.333 0.00 0.00 0.00 3.86
4921 7224 7.817418 AATGGTCTAAAACTTGTAAGAAGCA 57.183 32.000 0.00 0.00 0.00 3.91
4922 7225 6.861065 TGGTCTAAAACTTGTAAGAAGCAG 57.139 37.500 0.00 0.00 0.00 4.24
4923 7226 5.238650 TGGTCTAAAACTTGTAAGAAGCAGC 59.761 40.000 0.00 0.00 0.00 5.25
4924 7227 5.470437 GGTCTAAAACTTGTAAGAAGCAGCT 59.530 40.000 0.00 0.00 0.00 4.24
4934 7237 2.282745 AAGCAGCTGCCTTGGTCC 60.283 61.111 34.39 5.26 43.38 4.46
4984 7287 4.657814 TTAGGAATGGAGGGAATATGGC 57.342 45.455 0.00 0.00 0.00 4.40
4985 7288 2.431997 AGGAATGGAGGGAATATGGCA 58.568 47.619 0.00 0.00 0.00 4.92
4986 7289 2.108952 AGGAATGGAGGGAATATGGCAC 59.891 50.000 0.00 0.00 0.00 5.01
4987 7290 2.519013 GAATGGAGGGAATATGGCACC 58.481 52.381 0.00 0.00 0.00 5.01
4988 7291 1.533187 ATGGAGGGAATATGGCACCA 58.467 50.000 0.00 0.00 0.00 4.17
4989 7292 1.533187 TGGAGGGAATATGGCACCAT 58.467 50.000 7.45 7.45 40.19 3.55
4990 7293 2.712384 TGGAGGGAATATGGCACCATA 58.288 47.619 11.68 11.68 42.28 2.74
4992 7295 4.443658 TGGAGGGAATATGGCACCATATA 58.556 43.478 19.95 2.90 45.66 0.86
4993 7296 4.227300 TGGAGGGAATATGGCACCATATAC 59.773 45.833 19.95 15.76 45.66 1.47
4994 7297 4.227300 GGAGGGAATATGGCACCATATACA 59.773 45.833 19.95 0.00 45.66 2.29
4995 7298 5.431765 GAGGGAATATGGCACCATATACAG 58.568 45.833 19.95 0.00 45.66 2.74
5042 7345 9.863845 ATCTTTCTTTACTTGAAGCTAGTAGAC 57.136 33.333 0.00 0.00 30.36 2.59
5052 7355 7.934120 ACTTGAAGCTAGTAGACAAATGAAGTT 59.066 33.333 0.00 0.00 0.00 2.66
5057 7360 8.316640 AGCTAGTAGACAAATGAAGTTCTTTG 57.683 34.615 18.36 18.36 38.13 2.77
5138 7441 9.920946 ATGTTGTCTAATTATCAGGGTGTTAAT 57.079 29.630 0.00 0.00 0.00 1.40
5143 7446 9.555727 GTCTAATTATCAGGGTGTTAATGCTTA 57.444 33.333 0.00 0.00 0.00 3.09
5157 7460 7.597369 GTGTTAATGCTTAGGTTTTGGTTTAGG 59.403 37.037 0.00 0.00 0.00 2.69
5159 7462 6.987403 AATGCTTAGGTTTTGGTTTAGGAA 57.013 33.333 0.00 0.00 0.00 3.36
5160 7463 6.590234 ATGCTTAGGTTTTGGTTTAGGAAG 57.410 37.500 0.00 0.00 0.00 3.46
5161 7464 5.697067 TGCTTAGGTTTTGGTTTAGGAAGA 58.303 37.500 0.00 0.00 0.00 2.87
5162 7465 6.311735 TGCTTAGGTTTTGGTTTAGGAAGAT 58.688 36.000 0.00 0.00 0.00 2.40
5189 7492 3.411446 CGCCAGGCAAATATATTCCTCA 58.589 45.455 13.30 0.00 0.00 3.86
5195 7498 6.071728 CCAGGCAAATATATTCCTCATGGTTC 60.072 42.308 12.96 0.00 34.23 3.62
5207 7510 6.823286 TCCTCATGGTTCCATGTTATTCTA 57.177 37.500 25.06 8.69 42.96 2.10
5211 7514 6.119536 TCATGGTTCCATGTTATTCTACACC 58.880 40.000 25.06 0.00 42.96 4.16
5213 7516 4.289934 TGGTTCCATGTTATTCTACACCCA 59.710 41.667 0.00 0.00 0.00 4.51
5234 7537 3.683822 CAGAATTCTCTTCAGTGTCCTGC 59.316 47.826 4.57 0.00 38.66 4.85
5242 7545 3.641436 TCTTCAGTGTCCTGCTACTTTCA 59.359 43.478 0.00 0.00 38.66 2.69
5254 7557 4.318332 TGCTACTTTCACTTGTCCTGATG 58.682 43.478 0.00 0.00 0.00 3.07
5257 7560 5.348997 GCTACTTTCACTTGTCCTGATGTAC 59.651 44.000 0.00 0.00 0.00 2.90
5259 7562 5.542779 ACTTTCACTTGTCCTGATGTACTC 58.457 41.667 0.00 0.00 0.00 2.59
5260 7563 4.537135 TTCACTTGTCCTGATGTACTCC 57.463 45.455 0.00 0.00 0.00 3.85
5261 7564 2.492088 TCACTTGTCCTGATGTACTCCG 59.508 50.000 0.00 0.00 0.00 4.63
5262 7565 2.231478 CACTTGTCCTGATGTACTCCGT 59.769 50.000 0.00 0.00 0.00 4.69
5263 7566 3.442625 CACTTGTCCTGATGTACTCCGTA 59.557 47.826 0.00 0.00 0.00 4.02
5264 7567 4.082408 CACTTGTCCTGATGTACTCCGTAA 60.082 45.833 0.00 0.00 0.00 3.18
5265 7568 4.710375 ACTTGTCCTGATGTACTCCGTAAT 59.290 41.667 0.00 0.00 0.00 1.89
5266 7569 5.187186 ACTTGTCCTGATGTACTCCGTAATT 59.813 40.000 0.00 0.00 0.00 1.40
5283 7586 9.528018 CTCCGTAATTATTATTTTGTGGCAAAT 57.472 29.630 0.00 0.00 0.00 2.32
5346 7649 5.077564 GGTTACACCCCTTTCTGAAAGAAT 58.922 41.667 27.21 11.96 42.26 2.40
5374 7677 7.649533 ATTTCCAAGATGTGATAGCATTTCA 57.350 32.000 0.00 0.00 0.00 2.69
5383 7687 8.152898 AGATGTGATAGCATTTCAATAGCAGTA 58.847 33.333 0.00 0.00 0.00 2.74
5415 7719 6.662414 GCAAACAGCGCTCCATATATTATA 57.338 37.500 7.13 0.00 0.00 0.98
5450 7754 3.011595 CCATGCCCATAATCCCCTGATTA 59.988 47.826 0.00 0.00 45.14 1.75
5455 7759 6.868826 TGCCCATAATCCCCTGATTAAATTA 58.131 36.000 0.00 0.00 44.45 1.40
5541 7845 0.753262 ATGAGTACCGATGGGCTGAC 59.247 55.000 0.00 0.00 36.48 3.51
5562 7866 3.514309 ACGGTGTACAGATAAAGAAGCCT 59.486 43.478 0.00 0.00 0.00 4.58
5675 7979 2.124151 GTTGCCCGCATCCTGGAT 60.124 61.111 2.57 2.57 0.00 3.41
5694 8000 8.602424 TCCTGGATCATTAGTTTCTCAAAAGTA 58.398 33.333 0.00 0.00 30.64 2.24
5736 8042 5.308497 TGTCAAGTTTACCTGATCTGGGTTA 59.692 40.000 21.40 8.06 38.19 2.85
5737 8043 6.012858 TGTCAAGTTTACCTGATCTGGGTTAT 60.013 38.462 21.40 4.37 38.19 1.89
5742 8048 6.890268 AGTTTACCTGATCTGGGTTATTTTCC 59.110 38.462 21.40 1.58 38.19 3.13
5749 8055 7.231519 CCTGATCTGGGTTATTTTCCTTTATCC 59.768 40.741 10.73 0.00 0.00 2.59
5834 8140 4.759693 CGTGTTTATGCCCACATATACCAT 59.240 41.667 4.82 0.00 38.94 3.55
5912 8218 6.691754 TTCAAGCACTTCATTCTGTTTACA 57.308 33.333 0.00 0.00 0.00 2.41
5948 8254 1.887854 CCATTGACAGTGATTGTGCCA 59.112 47.619 0.00 0.00 41.05 4.92
5976 8282 1.088340 CGTGGATCTGCTCTTGGCTG 61.088 60.000 0.00 0.00 42.39 4.85
5991 8297 5.393866 TCTTGGCTGGGAAAATAGAAAAGT 58.606 37.500 0.00 0.00 0.00 2.66
5995 8308 4.950475 GGCTGGGAAAATAGAAAAGTAGCT 59.050 41.667 0.00 0.00 0.00 3.32
6021 8334 7.338800 AGAATTTACATCTATTGGCTTGTGG 57.661 36.000 0.00 0.00 0.00 4.17
6540 8874 8.712228 TTTCTCCTCTTATGTATCAGCATAGA 57.288 34.615 0.00 0.00 33.48 1.98
6546 8880 7.175347 TCTTATGTATCAGCATAGATCCCAC 57.825 40.000 0.00 0.00 33.48 4.61
6616 8950 7.493971 AGTCTCAGAAATTCCATAACAAGATCG 59.506 37.037 0.00 0.00 0.00 3.69
6620 8956 7.280876 TCAGAAATTCCATAACAAGATCGAAGG 59.719 37.037 0.00 0.00 0.00 3.46
6626 8962 8.624367 TTCCATAACAAGATCGAAGGTTTTTA 57.376 30.769 0.00 0.00 0.00 1.52
6744 9083 6.260936 CCATGTCAATGTTCTACCTTCCATAC 59.739 42.308 0.00 0.00 31.27 2.39
6745 9084 5.416083 TGTCAATGTTCTACCTTCCATACG 58.584 41.667 0.00 0.00 0.00 3.06
6746 9085 5.186215 TGTCAATGTTCTACCTTCCATACGA 59.814 40.000 0.00 0.00 0.00 3.43
6747 9086 6.103997 GTCAATGTTCTACCTTCCATACGAA 58.896 40.000 0.00 0.00 0.00 3.85
6780 9119 1.826385 ACAACTGCTAGCCATGTTCC 58.174 50.000 13.29 0.00 0.00 3.62
6891 9469 5.012046 TCAATGTCGCCTAACTGGATCATAT 59.988 40.000 0.00 0.00 38.35 1.78
6905 9483 5.545588 TGGATCATATGAACAGCTTCTAGC 58.454 41.667 9.99 0.00 42.84 3.42
6919 9497 4.314121 GCTTCTAGCGAATCCATCTCAAT 58.686 43.478 0.00 0.00 0.00 2.57
6931 9509 5.541953 TCCATCTCAATCATCACAGGTAG 57.458 43.478 0.00 0.00 0.00 3.18
6939 9517 8.762645 TCTCAATCATCACAGGTAGATTACTTT 58.237 33.333 0.00 0.00 0.00 2.66
7066 9644 7.174253 CACACAAAACCATATACAAGTACCAGT 59.826 37.037 0.00 0.00 0.00 4.00
7094 9672 0.250727 CCGGTGTGAATGACCCAACT 60.251 55.000 0.00 0.00 0.00 3.16
7095 9673 1.002659 CCGGTGTGAATGACCCAACTA 59.997 52.381 0.00 0.00 0.00 2.24
7096 9674 2.073816 CGGTGTGAATGACCCAACTAC 58.926 52.381 0.00 0.00 0.00 2.73
7097 9675 2.073816 GGTGTGAATGACCCAACTACG 58.926 52.381 0.00 0.00 0.00 3.51
7098 9676 2.549349 GGTGTGAATGACCCAACTACGT 60.549 50.000 0.00 0.00 0.00 3.57
7099 9677 3.135994 GTGTGAATGACCCAACTACGTT 58.864 45.455 0.00 0.00 0.00 3.99
7100 9678 3.562557 GTGTGAATGACCCAACTACGTTT 59.437 43.478 0.00 0.00 0.00 3.60
7101 9679 4.751098 GTGTGAATGACCCAACTACGTTTA 59.249 41.667 0.00 0.00 0.00 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 0.392193 CTGGAGAGCTTTGCGACCAT 60.392 55.000 0.00 0.00 32.45 3.55
46 47 2.123251 AGGATGATCCGACCGCCT 60.123 61.111 5.71 0.00 42.75 5.52
138 139 1.556911 GGTGGATCAGCTTTCTCCTCA 59.443 52.381 7.34 0.00 0.00 3.86
146 147 1.296715 GGACGTGGTGGATCAGCTT 59.703 57.895 0.00 0.00 32.61 3.74
152 153 0.976073 AAGGATCGGACGTGGTGGAT 60.976 55.000 0.00 0.00 0.00 3.41
183 193 4.390556 AGAGAGGGAGGCGGCAGT 62.391 66.667 13.08 0.00 0.00 4.40
189 205 4.219999 GCAGCGAGAGAGGGAGGC 62.220 72.222 0.00 0.00 0.00 4.70
217 233 1.356527 GAACGTCGCCCGCAAGTTAT 61.357 55.000 0.00 0.00 41.42 1.89
218 234 2.023223 GAACGTCGCCCGCAAGTTA 61.023 57.895 0.00 0.00 41.42 2.24
272 289 2.488355 GTCCGCCTCATTCGTCGA 59.512 61.111 0.00 0.00 0.00 4.20
297 314 2.897846 CCCACACCGTCGCAACAA 60.898 61.111 0.00 0.00 0.00 2.83
351 368 1.198713 GCTCTCAATCCTCACCTCCA 58.801 55.000 0.00 0.00 0.00 3.86
507 568 6.834168 AGTTTAAATATGGGGCGAATATGG 57.166 37.500 0.00 0.00 0.00 2.74
626 2338 0.109226 GACCTCTCAAACCCGTCTCG 60.109 60.000 0.00 0.00 0.00 4.04
650 2370 2.535984 CCGCTGAGTAAAAGCATCTACG 59.464 50.000 0.00 0.00 40.86 3.51
660 2380 1.137086 GATCTGGCTCCGCTGAGTAAA 59.863 52.381 7.01 0.00 40.95 2.01
668 2388 0.602372 GGATCAAGATCTGGCTCCGC 60.602 60.000 4.20 0.00 37.92 5.54
670 2390 3.603144 CGGATCAAGATCTGGCTCC 57.397 57.895 9.65 9.65 39.85 4.70
935 2655 1.482593 GATCCGAGGAAGAAAGCAGGA 59.517 52.381 0.00 0.00 0.00 3.86
997 2717 1.045911 AGGCCGAAGAGACTCATCCC 61.046 60.000 5.02 0.28 0.00 3.85
1109 2830 2.434359 CGCCGGAGAGGGTTCAAC 60.434 66.667 5.05 0.00 41.48 3.18
1111 2832 2.602267 TTCGCCGGAGAGGGTTCA 60.602 61.111 5.05 0.00 41.48 3.18
1134 2855 1.734748 GGTCGAAGGAGATCCCGAC 59.265 63.158 17.31 17.31 44.47 4.79
1212 2933 1.379977 TGCTCCGAACGGATCTCCT 60.380 57.895 16.22 0.00 44.24 3.69
1283 3004 4.688879 ACAGCGATTTCGTTCTGTAAATCA 59.311 37.500 10.27 0.00 39.60 2.57
1288 3009 4.304110 AGAAACAGCGATTTCGTTCTGTA 58.696 39.130 11.76 0.00 40.16 2.74
1289 3010 3.131396 AGAAACAGCGATTTCGTTCTGT 58.869 40.909 7.22 7.22 41.85 3.41
1290 3011 3.430218 AGAGAAACAGCGATTTCGTTCTG 59.570 43.478 7.90 7.03 42.37 3.02
1294 3015 2.338500 GGAGAGAAACAGCGATTTCGT 58.662 47.619 9.27 2.90 42.37 3.85
1319 3040 6.017192 CCATGAAATCCGTCATAAACTGCATA 60.017 38.462 0.00 0.00 36.04 3.14
1361 3082 9.547753 CAAACAGCTAATGTATTACTACTCCAT 57.452 33.333 0.00 0.00 43.00 3.41
1402 3123 7.489757 GCTAATGTATTACTACTCCATAGCAGC 59.510 40.741 0.00 0.00 33.73 5.25
1403 3124 8.744652 AGCTAATGTATTACTACTCCATAGCAG 58.255 37.037 0.00 0.00 33.73 4.24
1404 3125 8.523658 CAGCTAATGTATTACTACTCCATAGCA 58.476 37.037 0.00 0.00 33.73 3.49
1405 3126 8.524487 ACAGCTAATGTATTACTACTCCATAGC 58.476 37.037 0.00 0.00 41.60 2.97
1409 3130 9.417561 ACTAACAGCTAATGTATTACTACTCCA 57.582 33.333 0.00 0.00 43.00 3.86
1415 3136 7.709613 CGGGAAACTAACAGCTAATGTATTACT 59.290 37.037 0.00 0.00 43.00 2.24
1416 3137 7.517893 GCGGGAAACTAACAGCTAATGTATTAC 60.518 40.741 0.00 0.00 43.00 1.89
1417 3138 6.480981 GCGGGAAACTAACAGCTAATGTATTA 59.519 38.462 0.00 0.00 43.00 0.98
1418 3139 5.296035 GCGGGAAACTAACAGCTAATGTATT 59.704 40.000 0.00 0.00 43.00 1.89
1419 3140 4.814771 GCGGGAAACTAACAGCTAATGTAT 59.185 41.667 0.00 0.00 43.00 2.29
1420 3141 4.186159 GCGGGAAACTAACAGCTAATGTA 58.814 43.478 0.00 0.00 43.00 2.29
1421 3142 3.007635 GCGGGAAACTAACAGCTAATGT 58.992 45.455 0.00 0.00 46.97 2.71
1422 3143 3.006940 TGCGGGAAACTAACAGCTAATG 58.993 45.455 0.00 0.00 0.00 1.90
1423 3144 3.343941 TGCGGGAAACTAACAGCTAAT 57.656 42.857 0.00 0.00 0.00 1.73
1424 3145 2.843401 TGCGGGAAACTAACAGCTAA 57.157 45.000 0.00 0.00 0.00 3.09
1425 3146 2.843401 TTGCGGGAAACTAACAGCTA 57.157 45.000 0.00 0.00 0.00 3.32
1426 3147 2.200373 ATTGCGGGAAACTAACAGCT 57.800 45.000 0.00 0.00 0.00 4.24
1427 3148 3.297830 AAATTGCGGGAAACTAACAGC 57.702 42.857 0.00 0.00 0.00 4.40
1428 3149 3.428534 GCAAAATTGCGGGAAACTAACAG 59.571 43.478 1.90 0.00 45.11 3.16
1429 3150 3.385577 GCAAAATTGCGGGAAACTAACA 58.614 40.909 1.90 0.00 45.11 2.41
1442 3163 4.491676 AGTTGAGCATAGCAGCAAAATTG 58.508 39.130 0.00 0.00 36.85 2.32
1443 3164 4.796038 AGTTGAGCATAGCAGCAAAATT 57.204 36.364 0.00 0.00 36.85 1.82
1444 3165 4.673580 CGAAGTTGAGCATAGCAGCAAAAT 60.674 41.667 0.00 0.00 36.85 1.82
1445 3166 3.365264 CGAAGTTGAGCATAGCAGCAAAA 60.365 43.478 0.00 0.00 36.85 2.44
1446 3167 2.160219 CGAAGTTGAGCATAGCAGCAAA 59.840 45.455 0.00 0.00 36.85 3.68
1447 3168 1.733912 CGAAGTTGAGCATAGCAGCAA 59.266 47.619 0.00 0.00 36.85 3.91
1448 3169 1.338105 ACGAAGTTGAGCATAGCAGCA 60.338 47.619 0.00 0.00 37.78 4.41
1591 3312 1.974236 CAGAGACTTGGGAGGTCAGTT 59.026 52.381 0.00 0.00 36.29 3.16
1608 3329 5.186215 TGGTACCGAATACAGTTGAATCAGA 59.814 40.000 7.57 0.00 35.23 3.27
1611 3332 5.640357 TGTTGGTACCGAATACAGTTGAATC 59.360 40.000 2.45 0.00 35.23 2.52
1616 3337 5.217978 TCTTGTTGGTACCGAATACAGTT 57.782 39.130 2.45 0.00 35.23 3.16
1633 3356 4.341806 TGATTCACTGCCATTTGTTCTTGT 59.658 37.500 0.00 0.00 0.00 3.16
1639 3362 3.928727 CTGTGATTCACTGCCATTTGT 57.071 42.857 17.26 0.00 35.11 2.83
1697 3420 9.935682 CGATGAAAACATACTAACATAGCAATT 57.064 29.630 0.00 0.00 0.00 2.32
1698 3421 9.325198 TCGATGAAAACATACTAACATAGCAAT 57.675 29.630 0.00 0.00 0.00 3.56
1699 3422 8.600625 GTCGATGAAAACATACTAACATAGCAA 58.399 33.333 0.00 0.00 0.00 3.91
1700 3423 7.043656 CGTCGATGAAAACATACTAACATAGCA 60.044 37.037 0.00 0.00 0.00 3.49
1701 3424 7.166970 TCGTCGATGAAAACATACTAACATAGC 59.833 37.037 4.45 0.00 0.00 2.97
1702 3425 8.556517 TCGTCGATGAAAACATACTAACATAG 57.443 34.615 4.45 0.00 0.00 2.23
1703 3426 8.914328 TTCGTCGATGAAAACATACTAACATA 57.086 30.769 17.57 0.00 0.00 2.29
1704 3427 7.821595 TTCGTCGATGAAAACATACTAACAT 57.178 32.000 17.57 0.00 0.00 2.71
1705 3428 7.148705 CCTTTCGTCGATGAAAACATACTAACA 60.149 37.037 27.77 6.96 37.40 2.41
1706 3429 7.062605 TCCTTTCGTCGATGAAAACATACTAAC 59.937 37.037 27.77 0.00 37.40 2.34
1707 3430 7.092079 TCCTTTCGTCGATGAAAACATACTAA 58.908 34.615 27.77 8.05 37.40 2.24
1708 3431 6.623486 TCCTTTCGTCGATGAAAACATACTA 58.377 36.000 27.77 8.68 37.40 1.82
1709 3432 5.475719 TCCTTTCGTCGATGAAAACATACT 58.524 37.500 27.77 0.00 37.40 2.12
1710 3433 5.773239 TCCTTTCGTCGATGAAAACATAC 57.227 39.130 27.77 0.00 37.40 2.39
1712 3435 5.880054 ATTCCTTTCGTCGATGAAAACAT 57.120 34.783 27.77 18.43 37.40 2.71
1724 3447 2.890945 CCTTGGACCAAATTCCTTTCGT 59.109 45.455 8.59 0.00 36.51 3.85
1727 3450 5.680619 GAAAACCTTGGACCAAATTCCTTT 58.319 37.500 8.59 4.11 36.51 3.11
1728 3451 4.202212 CGAAAACCTTGGACCAAATTCCTT 60.202 41.667 8.59 0.00 36.51 3.36
1738 3461 2.144482 TCGACTCGAAAACCTTGGAC 57.856 50.000 0.00 0.00 31.06 4.02
1913 3637 2.573009 TGCATGATGAAGAGTTGAGGGA 59.427 45.455 0.00 0.00 0.00 4.20
1990 3734 3.578716 CTCTCCTCCTCTGGTTGTTGTTA 59.421 47.826 0.00 0.00 0.00 2.41
2003 3756 0.923729 TCTGCTCCTCCTCTCCTCCT 60.924 60.000 0.00 0.00 0.00 3.69
2030 3783 0.482446 TCATCCCCTGGTTGTTGCTT 59.518 50.000 0.00 0.00 0.00 3.91
2080 4123 4.465446 TGCTCCTCCCCTCCTCCG 62.465 72.222 0.00 0.00 0.00 4.63
2107 4219 2.045536 CTCCCCTGGTTGCTGCTC 60.046 66.667 0.00 0.00 0.00 4.26
2126 4241 3.486905 TTGCTGCTGCTGGTCTGCT 62.487 57.895 17.00 0.00 39.95 4.24
2127 4242 2.981909 TTGCTGCTGCTGGTCTGC 60.982 61.111 17.00 0.94 40.48 4.26
2128 4243 2.623915 GGTTGCTGCTGCTGGTCTG 61.624 63.158 17.00 0.00 40.48 3.51
2129 4244 2.282040 GGTTGCTGCTGCTGGTCT 60.282 61.111 17.00 0.00 40.48 3.85
2130 4245 2.595463 TGGTTGCTGCTGCTGGTC 60.595 61.111 17.00 4.78 40.48 4.02
2131 4246 2.596631 CTGGTTGCTGCTGCTGGT 60.597 61.111 17.00 0.00 40.48 4.00
2132 4247 3.371063 CCTGGTTGCTGCTGCTGG 61.371 66.667 17.00 7.30 40.48 4.85
2133 4248 3.371063 CCCTGGTTGCTGCTGCTG 61.371 66.667 17.00 0.77 40.48 4.41
2134 4249 3.137385 TTCCCTGGTTGCTGCTGCT 62.137 57.895 17.00 0.00 40.48 4.24
2135 4250 2.598394 TTCCCTGGTTGCTGCTGC 60.598 61.111 8.89 8.89 40.20 5.25
2136 4251 1.975407 CCTTCCCTGGTTGCTGCTG 60.975 63.158 0.00 0.00 0.00 4.41
2137 4252 2.134630 CTCCTTCCCTGGTTGCTGCT 62.135 60.000 0.00 0.00 0.00 4.24
2138 4253 1.676967 CTCCTTCCCTGGTTGCTGC 60.677 63.158 0.00 0.00 0.00 5.25
2139 4254 1.676967 GCTCCTTCCCTGGTTGCTG 60.677 63.158 0.00 0.00 0.00 4.41
2140 4255 2.134630 CTGCTCCTTCCCTGGTTGCT 62.135 60.000 0.00 0.00 0.00 3.91
2141 4256 1.676967 CTGCTCCTTCCCTGGTTGC 60.677 63.158 0.00 0.00 0.00 4.17
2142 4257 1.676967 GCTGCTCCTTCCCTGGTTG 60.677 63.158 0.00 0.00 0.00 3.77
2143 4258 1.719063 TTGCTGCTCCTTCCCTGGTT 61.719 55.000 0.00 0.00 0.00 3.67
2144 4259 2.134630 CTTGCTGCTCCTTCCCTGGT 62.135 60.000 0.00 0.00 0.00 4.00
2145 4260 1.378250 CTTGCTGCTCCTTCCCTGG 60.378 63.158 0.00 0.00 0.00 4.45
2146 4261 2.045131 GCTTGCTGCTCCTTCCCTG 61.045 63.158 0.00 0.00 38.95 4.45
2147 4262 2.354343 GCTTGCTGCTCCTTCCCT 59.646 61.111 0.00 0.00 38.95 4.20
2148 4263 2.753446 GGCTTGCTGCTCCTTCCC 60.753 66.667 0.00 0.00 42.39 3.97
2149 4264 2.034687 TGGCTTGCTGCTCCTTCC 59.965 61.111 0.00 0.00 42.39 3.46
2150 4265 2.698763 GCTGGCTTGCTGCTCCTTC 61.699 63.158 0.00 0.00 42.39 3.46
2151 4266 2.675772 GCTGGCTTGCTGCTCCTT 60.676 61.111 0.00 0.00 42.39 3.36
2152 4267 3.502621 TTGCTGGCTTGCTGCTCCT 62.503 57.895 0.00 0.00 42.39 3.69
2153 4268 2.987547 TTGCTGGCTTGCTGCTCC 60.988 61.111 0.00 0.10 42.39 4.70
2154 4269 0.957395 TAGTTGCTGGCTTGCTGCTC 60.957 55.000 0.00 0.00 42.39 4.26
2210 4326 2.221299 CGAACCTGTTCCCCTCCCA 61.221 63.158 4.54 0.00 36.27 4.37
2456 4609 4.592485 CTCCTATACGAGCAGACCAAAT 57.408 45.455 0.00 0.00 0.00 2.32
2466 4619 5.416013 TCATTACATCAGGCTCCTATACGAG 59.584 44.000 0.00 0.00 0.00 4.18
2467 4620 5.183331 GTCATTACATCAGGCTCCTATACGA 59.817 44.000 0.00 0.00 0.00 3.43
2468 4621 5.184096 AGTCATTACATCAGGCTCCTATACG 59.816 44.000 0.00 0.00 0.00 3.06
2474 4627 2.435805 TCCAGTCATTACATCAGGCTCC 59.564 50.000 0.00 0.00 0.00 4.70
2475 4628 3.827008 TCCAGTCATTACATCAGGCTC 57.173 47.619 0.00 0.00 0.00 4.70
2500 4653 2.278245 TCCCCTTGTCAGACATGGAAT 58.722 47.619 29.19 0.00 43.79 3.01
2551 4704 2.202362 CCTCACGCTCGAGTCACG 60.202 66.667 15.13 11.72 44.09 4.35
2556 4709 2.126307 CCACACCTCACGCTCGAG 60.126 66.667 8.45 8.45 0.00 4.04
2562 4715 2.343758 CCCACTCCACACCTCACG 59.656 66.667 0.00 0.00 0.00 4.35
2566 4719 3.570212 GCCACCCACTCCACACCT 61.570 66.667 0.00 0.00 0.00 4.00
2603 4757 9.316730 CTGGTTACAAGTTAGTTACTAACAACA 57.683 33.333 29.52 19.06 46.01 3.33
2610 4764 7.362747 CGATCTCCTGGTTACAAGTTAGTTACT 60.363 40.741 0.00 0.00 39.32 2.24
2611 4765 6.750963 CGATCTCCTGGTTACAAGTTAGTTAC 59.249 42.308 0.00 0.00 0.00 2.50
2625 4782 1.722034 ATACATGCCGATCTCCTGGT 58.278 50.000 0.00 0.00 0.00 4.00
2628 4785 4.040829 TCATTCAATACATGCCGATCTCCT 59.959 41.667 0.00 0.00 0.00 3.69
2684 4841 2.393271 AAATGAGGGAGCAAGAGACG 57.607 50.000 0.00 0.00 0.00 4.18
2691 4848 2.655090 TGTCACAAAATGAGGGAGCA 57.345 45.000 0.00 0.00 38.28 4.26
2695 4852 3.181477 TGCAACTTGTCACAAAATGAGGG 60.181 43.478 6.44 0.00 38.28 4.30
2704 4861 2.049888 TGTGGATGCAACTTGTCACA 57.950 45.000 0.00 0.00 33.48 3.58
2709 4866 2.865551 GGTTGTTTGTGGATGCAACTTG 59.134 45.455 0.00 0.00 40.49 3.16
2716 4873 1.619827 AGCCATGGTTGTTTGTGGATG 59.380 47.619 14.67 0.00 33.53 3.51
2759 4916 7.791029 TGTAATGCCTGACTTGATACAGATAA 58.209 34.615 0.00 0.00 36.38 1.75
2767 4924 4.910195 TCAGTTGTAATGCCTGACTTGAT 58.090 39.130 0.00 0.00 30.58 2.57
2784 4945 7.215789 AGAATCTCGCAAATCTGATATCAGTT 58.784 34.615 27.80 19.26 44.12 3.16
2789 4950 5.167121 CGGAGAATCTCGCAAATCTGATAT 58.833 41.667 3.96 0.00 33.73 1.63
2811 4972 1.591059 CTCTCTTCATCCCGCTGCG 60.591 63.158 16.34 16.34 0.00 5.18
2818 4979 2.266554 CACTCGTTGCTCTCTTCATCC 58.733 52.381 0.00 0.00 0.00 3.51
2820 4981 1.066573 CCCACTCGTTGCTCTCTTCAT 60.067 52.381 0.00 0.00 0.00 2.57
2825 4986 0.033504 TCAACCCACTCGTTGCTCTC 59.966 55.000 0.00 0.00 42.37 3.20
2844 5005 5.337652 CGAGGAGGAATTTTAGGTGAGAACT 60.338 44.000 0.00 0.00 0.00 3.01
2852 5013 2.608090 GCGAACGAGGAGGAATTTTAGG 59.392 50.000 0.00 0.00 0.00 2.69
2853 5014 3.522553 AGCGAACGAGGAGGAATTTTAG 58.477 45.455 0.00 0.00 0.00 1.85
2865 5026 1.190323 GGATAATTGCGAGCGAACGAG 59.810 52.381 5.91 0.00 35.09 4.18
2869 5139 0.179234 TGGGGATAATTGCGAGCGAA 59.821 50.000 0.00 0.00 0.00 4.70
2871 5141 0.518636 CATGGGGATAATTGCGAGCG 59.481 55.000 0.00 0.00 0.00 5.03
2888 5158 4.020396 TGCAACTGGAATTTTACCATGCAT 60.020 37.500 10.00 0.00 43.68 3.96
2891 5161 7.095910 TGTAATGCAACTGGAATTTTACCATG 58.904 34.615 0.00 0.00 36.79 3.66
2892 5162 7.238486 TGTAATGCAACTGGAATTTTACCAT 57.762 32.000 0.00 0.00 36.79 3.55
2905 5175 5.068987 ACCACACAAATCTTGTAATGCAACT 59.931 36.000 0.00 0.00 43.23 3.16
2911 5181 6.263617 ACCGTAAACCACACAAATCTTGTAAT 59.736 34.615 0.00 0.00 43.23 1.89
2913 5184 5.007823 CACCGTAAACCACACAAATCTTGTA 59.992 40.000 0.00 0.00 43.23 2.41
2931 5202 0.105224 CAACTCACACCACCACCGTA 59.895 55.000 0.00 0.00 0.00 4.02
2933 5204 0.250295 ATCAACTCACACCACCACCG 60.250 55.000 0.00 0.00 0.00 4.94
2935 5206 1.608590 CCAATCAACTCACACCACCAC 59.391 52.381 0.00 0.00 0.00 4.16
2936 5207 1.478471 CCCAATCAACTCACACCACCA 60.478 52.381 0.00 0.00 0.00 4.17
2942 5213 4.202451 TGTTCATCTCCCAATCAACTCACA 60.202 41.667 0.00 0.00 0.00 3.58
2943 5214 4.326826 TGTTCATCTCCCAATCAACTCAC 58.673 43.478 0.00 0.00 0.00 3.51
2965 5236 4.685807 ACTTACTACTTAGCCAGGAACCT 58.314 43.478 0.00 0.00 0.00 3.50
2967 5238 5.451659 GCCTACTTACTACTTAGCCAGGAAC 60.452 48.000 0.00 0.00 0.00 3.62
2981 5253 8.469309 TGACTATAAATAACCGCCTACTTACT 57.531 34.615 0.00 0.00 0.00 2.24
3008 5280 8.152246 TGTAGCACCATTTAAGTAACACTAGTT 58.848 33.333 0.00 0.00 41.74 2.24
3012 5284 6.598064 GGATGTAGCACCATTTAAGTAACACT 59.402 38.462 0.00 0.00 0.00 3.55
3046 5318 7.391554 CCCATAGATAGGTTATGACAACCAATG 59.608 40.741 8.76 4.49 42.69 2.82
3066 5338 2.828877 CAAAATGTGCATGCCCCATAG 58.171 47.619 16.68 7.48 0.00 2.23
3092 5364 5.771666 AGCTCCACCATATACATTTCCAATG 59.228 40.000 0.00 0.00 0.00 2.82
3093 5365 5.957132 AGCTCCACCATATACATTTCCAAT 58.043 37.500 0.00 0.00 0.00 3.16
3124 5396 7.648142 TCCTCAAGTTCATGTAAACAATTGAC 58.352 34.615 13.59 0.11 0.00 3.18
3126 5398 8.918658 CAATCCTCAAGTTCATGTAAACAATTG 58.081 33.333 3.24 3.24 0.00 2.32
3128 5400 7.092716 GCAATCCTCAAGTTCATGTAAACAAT 58.907 34.615 0.00 0.00 0.00 2.71
3139 5411 7.440523 AATATATTCCGCAATCCTCAAGTTC 57.559 36.000 0.00 0.00 0.00 3.01
3163 5438 8.774183 ACCAGTCCATGTATACCTAACAATAAA 58.226 33.333 0.00 0.00 0.00 1.40
3172 5447 4.556697 TCATCACCAGTCCATGTATACCT 58.443 43.478 0.00 0.00 0.00 3.08
3175 5450 8.879227 TGATTTATCATCACCAGTCCATGTATA 58.121 33.333 0.00 0.00 0.00 1.47
3176 5451 7.748677 TGATTTATCATCACCAGTCCATGTAT 58.251 34.615 0.00 0.00 0.00 2.29
3257 5532 6.208599 TGTTTGACTTTGGAGAAGTTTGAACT 59.791 34.615 0.00 0.00 42.04 3.01
3268 5543 4.654091 AACATGGTGTTTGACTTTGGAG 57.346 40.909 0.00 0.00 37.26 3.86
3317 5592 3.386078 ACCAAGCTCATGTCTATGTCGAT 59.614 43.478 0.00 0.00 35.73 3.59
3318 5593 2.760650 ACCAAGCTCATGTCTATGTCGA 59.239 45.455 0.00 0.00 35.73 4.20
3319 5594 2.862536 CACCAAGCTCATGTCTATGTCG 59.137 50.000 0.00 0.00 35.73 4.35
3320 5595 3.866651 ACACCAAGCTCATGTCTATGTC 58.133 45.455 0.00 0.00 35.73 3.06
3352 5627 5.824097 ACTAAAACCTTTTCGCTTACCTGAA 59.176 36.000 0.00 0.00 0.00 3.02
3363 5642 5.195001 TGACCATGCACTAAAACCTTTTC 57.805 39.130 0.00 0.00 0.00 2.29
3384 5663 6.043243 ACCATGGGAGTATAGTAGGAACATTG 59.957 42.308 18.09 0.00 0.00 2.82
3422 5701 7.209471 ACGAAATGTTTGATACTGCCTTTTA 57.791 32.000 0.00 0.00 0.00 1.52
3444 5723 3.653256 TCTGAGAAGTTCGATACGACG 57.347 47.619 0.00 0.00 34.89 5.12
3453 5732 5.814705 ACAATGGATCGAATCTGAGAAGTTC 59.185 40.000 0.00 0.00 0.00 3.01
3468 5747 7.989170 TGCAGTGGATATATGATACAATGGATC 59.011 37.037 0.00 0.00 0.00 3.36
3471 5750 7.065443 CACTGCAGTGGATATATGATACAATGG 59.935 40.741 34.65 6.04 42.10 3.16
3495 5774 9.832445 TGATGTACTTCTATTAAAGGAATCCAC 57.168 33.333 0.61 0.00 0.00 4.02
3513 5792 7.987458 AGTTACGATTCATTTCCATGATGTACT 59.013 33.333 0.00 0.00 39.28 2.73
3520 5799 7.475015 ACAATGAGTTACGATTCATTTCCATG 58.525 34.615 0.00 0.00 39.38 3.66
3521 5800 7.630242 ACAATGAGTTACGATTCATTTCCAT 57.370 32.000 0.00 0.00 39.38 3.41
3533 5812 5.756950 AACATGACGTACAATGAGTTACG 57.243 39.130 0.00 1.21 41.18 3.18
3540 5819 5.352846 TCCCATACAAACATGACGTACAATG 59.647 40.000 0.00 0.00 0.00 2.82
3543 5822 4.538746 TCCCATACAAACATGACGTACA 57.461 40.909 0.00 0.00 0.00 2.90
3572 5856 2.113289 CGTGGCAGGTTTGTAAAAACG 58.887 47.619 2.42 0.00 33.62 3.60
3577 5861 0.887387 GAGCCGTGGCAGGTTTGTAA 60.887 55.000 14.29 0.00 44.88 2.41
3613 5897 4.439305 TCAATCCAGCACAAGTATTTGC 57.561 40.909 0.00 0.00 37.85 3.68
3619 5903 1.180029 GCCATCAATCCAGCACAAGT 58.820 50.000 0.00 0.00 0.00 3.16
3637 5921 2.684881 TGAGCATTGCTTAAGGCTTAGC 59.315 45.455 13.35 16.71 39.88 3.09
3657 5941 6.545508 TGAATCTGCTAATCAACGACAAATG 58.454 36.000 0.00 0.00 0.00 2.32
3683 5967 8.644216 TCAGGAACACAGTACAAGTAATAAAGA 58.356 33.333 0.00 0.00 0.00 2.52
3687 5971 8.590204 TGATTCAGGAACACAGTACAAGTAATA 58.410 33.333 0.00 0.00 0.00 0.98
3693 5977 4.141597 TGGTGATTCAGGAACACAGTACAA 60.142 41.667 0.00 0.00 36.42 2.41
3699 5983 4.163441 TCTTTGGTGATTCAGGAACACA 57.837 40.909 13.04 3.21 36.42 3.72
3751 6035 5.614308 TCCATGTAGCAAATCTAGTGATGG 58.386 41.667 0.00 0.00 34.25 3.51
3756 6040 7.112122 TGTTCATTCCATGTAGCAAATCTAGT 58.888 34.615 0.00 0.00 0.00 2.57
3773 6057 3.117738 ACCCCAGAGATGGATGTTCATTC 60.118 47.826 0.00 0.00 0.00 2.67
3801 6085 8.594687 GCAAACTGTGGCAAATTTAATATACTG 58.405 33.333 0.00 0.00 0.00 2.74
3802 6086 8.531146 AGCAAACTGTGGCAAATTTAATATACT 58.469 29.630 7.35 0.00 0.00 2.12
3829 6115 6.273825 CAGTTTCTGAGTGGCGTATATAACT 58.726 40.000 0.00 0.00 32.44 2.24
3869 6155 1.657094 CGGCATTACTCACGGTGTAAC 59.343 52.381 8.17 0.00 33.45 2.50
3883 6169 9.162764 GGATACTATCAAATTATGTACGGCATT 57.837 33.333 0.24 0.00 38.94 3.56
3884 6170 8.318412 TGGATACTATCAAATTATGTACGGCAT 58.682 33.333 0.00 0.67 38.51 4.40
3885 6171 7.672240 TGGATACTATCAAATTATGTACGGCA 58.328 34.615 0.00 0.00 37.61 5.69
3886 6172 8.718102 ATGGATACTATCAAATTATGTACGGC 57.282 34.615 0.00 0.00 37.61 5.68
3971 6257 0.321298 TAAGGTTTCCACTGCCGAGC 60.321 55.000 0.00 0.00 0.00 5.03
4113 6408 7.775093 CCAACCACAGAATATTCTAGATCCAAA 59.225 37.037 17.53 0.00 35.34 3.28
4171 6466 6.769512 AGCTCTAGTGAATTTACTGGTTTCA 58.230 36.000 12.85 0.00 31.80 2.69
4177 6472 8.598924 CACATGTTAGCTCTAGTGAATTTACTG 58.401 37.037 12.85 3.80 32.19 2.74
4183 6478 6.042638 ACACACATGTTAGCTCTAGTGAAT 57.957 37.500 13.67 0.00 34.46 2.57
4198 6493 3.047796 GCTGAGAAGCAAAACACACATG 58.952 45.455 0.00 0.00 34.41 3.21
4226 6521 8.232913 ACAGCAGGTTAACTTGATTAAAGAAA 57.767 30.769 20.84 0.00 39.38 2.52
4277 6572 2.050836 TTGTTGGGCAGCTCTCGGAA 62.051 55.000 0.00 0.00 0.00 4.30
4283 6578 0.524862 CAGTCATTGTTGGGCAGCTC 59.475 55.000 0.00 0.00 0.00 4.09
4316 6611 7.541783 TCAAAGAATGAAAATAATGGACAAGCG 59.458 33.333 0.00 0.00 34.30 4.68
4364 6660 5.304686 TGAAGAGACTAAAAAGGCTTCCA 57.695 39.130 0.00 0.00 32.84 3.53
4369 6665 6.558909 CAATCCATGAAGAGACTAAAAAGGC 58.441 40.000 0.00 0.00 0.00 4.35
4372 6668 9.466497 AATAGCAATCCATGAAGAGACTAAAAA 57.534 29.630 0.00 0.00 0.00 1.94
4408 6705 8.443953 AAATTGCAGCACCTTAAAACAATTTA 57.556 26.923 0.00 0.00 41.72 1.40
4411 6708 9.369904 CTATAAATTGCAGCACCTTAAAACAAT 57.630 29.630 0.00 0.00 0.00 2.71
4443 6740 7.838079 AGAAGATCTACAGCAGATAATGACT 57.162 36.000 0.00 0.00 44.41 3.41
4487 6784 6.151312 CACTCAGTAGAAGCCTTCACTAGTTA 59.849 42.308 7.29 0.00 0.00 2.24
4493 6790 2.289072 TGCACTCAGTAGAAGCCTTCAC 60.289 50.000 7.29 3.34 0.00 3.18
4506 6803 7.115378 GGACAAAGAAATTAAACATGCACTCAG 59.885 37.037 0.00 0.00 0.00 3.35
4508 6805 6.922957 TGGACAAAGAAATTAAACATGCACTC 59.077 34.615 0.00 0.00 0.00 3.51
4509 6806 6.815089 TGGACAAAGAAATTAAACATGCACT 58.185 32.000 0.00 0.00 0.00 4.40
4557 6859 9.774742 GAAATAATTAAAGACACCATGAGTCAC 57.225 33.333 17.01 1.82 38.46 3.67
4562 6864 9.983024 TTAGGGAAATAATTAAAGACACCATGA 57.017 29.630 0.00 0.00 0.00 3.07
4591 6893 3.066208 TCTTAGGAATGGAGGGAGCAT 57.934 47.619 0.00 0.00 0.00 3.79
4613 6915 3.312421 TCTGAGAAAAGTTTCACGCCTTG 59.688 43.478 6.56 0.00 39.61 3.61
4619 6921 7.032377 AGTGGAATTCTGAGAAAAGTTTCAC 57.968 36.000 9.41 9.41 39.61 3.18
4661 6963 7.630924 CATATTCGGTAAATCAGAGTGGAAAC 58.369 38.462 0.00 0.00 0.00 2.78
4667 6970 4.505039 GGGGCATATTCGGTAAATCAGAGT 60.505 45.833 0.00 0.00 0.00 3.24
4679 6982 0.037303 AGCATGGAGGGGCATATTCG 59.963 55.000 0.00 0.00 0.00 3.34
4703 7006 1.210478 GCATGTCTTTAGAGGGGCAGA 59.790 52.381 0.00 0.00 0.00 4.26
4708 7011 2.019984 GGCAAGCATGTCTTTAGAGGG 58.980 52.381 0.00 0.00 31.27 4.30
4746 7049 1.203441 ATGGCAAGAGGAGGTGAGCA 61.203 55.000 0.00 0.00 0.00 4.26
4751 7054 2.175715 GGGAATAATGGCAAGAGGAGGT 59.824 50.000 0.00 0.00 0.00 3.85
4811 7114 0.030101 GAGGCAGCTAGCTCTACACG 59.970 60.000 16.15 3.40 44.79 4.49
4813 7116 2.151502 AAGAGGCAGCTAGCTCTACA 57.848 50.000 16.15 0.00 44.79 2.74
4825 7128 2.290832 TGTGCATGACCAATAAGAGGCA 60.291 45.455 0.00 0.00 0.00 4.75
4832 7135 2.276201 GTACGCTGTGCATGACCAATA 58.724 47.619 0.00 0.00 0.00 1.90
4833 7136 1.086696 GTACGCTGTGCATGACCAAT 58.913 50.000 0.00 0.00 0.00 3.16
4838 7141 1.736282 CCACGTACGCTGTGCATGA 60.736 57.895 16.72 0.00 36.01 3.07
4851 7154 2.073816 GCAGTTATTAGCACACCACGT 58.926 47.619 0.00 0.00 0.00 4.49
4852 7155 2.346803 AGCAGTTATTAGCACACCACG 58.653 47.619 0.00 0.00 0.00 4.94
4853 7156 3.334691 TGAGCAGTTATTAGCACACCAC 58.665 45.455 0.00 0.00 0.00 4.16
4854 7157 3.007940 ACTGAGCAGTTATTAGCACACCA 59.992 43.478 0.00 0.00 38.83 4.17
4855 7158 3.372206 CACTGAGCAGTTATTAGCACACC 59.628 47.826 0.00 0.00 40.20 4.16
4869 7172 3.070878 TCTGGTAAATCACACACTGAGCA 59.929 43.478 0.00 0.00 30.20 4.26
4876 7179 3.500448 TTGCCTCTGGTAAATCACACA 57.500 42.857 0.00 0.00 0.00 3.72
4891 7194 5.869649 ACAAGTTTTAGACCATTTTGCCT 57.130 34.783 0.00 0.00 0.00 4.75
4904 7207 4.023193 GGCAGCTGCTTCTTACAAGTTTTA 60.023 41.667 35.82 0.00 41.70 1.52
4918 7221 2.838467 AAGGACCAAGGCAGCTGCT 61.838 57.895 35.82 20.32 41.70 4.24
4919 7222 2.282745 AAGGACCAAGGCAGCTGC 60.283 61.111 30.88 30.88 41.14 5.25
4920 7223 2.633509 GCAAGGACCAAGGCAGCTG 61.634 63.158 10.11 10.11 0.00 4.24
4921 7224 2.282745 GCAAGGACCAAGGCAGCT 60.283 61.111 0.00 0.00 0.00 4.24
4922 7225 3.741476 CGCAAGGACCAAGGCAGC 61.741 66.667 0.00 0.00 0.00 5.25
4923 7226 1.172180 TTTCGCAAGGACCAAGGCAG 61.172 55.000 0.00 0.00 38.47 4.85
4924 7227 0.753479 TTTTCGCAAGGACCAAGGCA 60.753 50.000 0.00 0.00 38.47 4.75
4964 7267 3.330701 GTGCCATATTCCCTCCATTCCTA 59.669 47.826 0.00 0.00 0.00 2.94
4970 7273 1.533187 ATGGTGCCATATTCCCTCCA 58.467 50.000 1.20 0.00 34.49 3.86
4978 7281 8.267620 ATATACTGCTGTATATGGTGCCATAT 57.732 34.615 26.46 22.66 45.49 1.78
4980 7283 4.916041 ATACTGCTGTATATGGTGCCAT 57.084 40.909 13.98 8.89 37.59 4.40
5107 7410 6.543831 ACCCTGATAATTAGACAACATTGAGC 59.456 38.462 0.00 0.00 0.00 4.26
5109 7412 7.402054 ACACCCTGATAATTAGACAACATTGA 58.598 34.615 0.00 0.00 0.00 2.57
5114 7417 8.129211 GCATTAACACCCTGATAATTAGACAAC 58.871 37.037 0.00 0.00 0.00 3.32
5138 7441 5.697067 TCTTCCTAAACCAAAACCTAAGCA 58.303 37.500 0.00 0.00 0.00 3.91
5143 7446 6.208797 GCAGTAATCTTCCTAAACCAAAACCT 59.791 38.462 0.00 0.00 0.00 3.50
5157 7460 0.744414 TGCCTGGCGCAGTAATCTTC 60.744 55.000 14.98 0.00 44.64 2.87
5159 7462 2.989639 TGCCTGGCGCAGTAATCT 59.010 55.556 14.98 0.00 44.64 2.40
5189 7492 5.044476 TGGGTGTAGAATAACATGGAACCAT 60.044 40.000 0.00 0.00 37.08 3.55
5195 7498 7.056635 AGAATTCTGGGTGTAGAATAACATGG 58.943 38.462 7.30 0.00 44.43 3.66
5207 7510 3.392616 ACACTGAAGAGAATTCTGGGTGT 59.607 43.478 14.00 15.37 36.88 4.16
5211 7514 4.550076 AGGACACTGAAGAGAATTCTGG 57.450 45.455 14.00 0.51 32.79 3.86
5234 7537 6.692486 AGTACATCAGGACAAGTGAAAGTAG 58.308 40.000 0.00 0.00 0.00 2.57
5242 7545 2.526432 ACGGAGTACATCAGGACAAGT 58.474 47.619 0.00 0.00 41.94 3.16
5254 7557 8.614346 TGCCACAAAATAATAATTACGGAGTAC 58.386 33.333 0.00 0.00 45.76 2.73
5257 7560 8.918961 TTTGCCACAAAATAATAATTACGGAG 57.081 30.769 0.00 0.00 0.00 4.63
5346 7649 5.427378 TGCTATCACATCTTGGAAATTCGA 58.573 37.500 0.00 0.00 0.00 3.71
5358 7661 7.199541 ACTGCTATTGAAATGCTATCACATC 57.800 36.000 0.00 0.00 0.00 3.06
5374 7677 3.497103 TGCCTGCATCATACTGCTATT 57.503 42.857 0.00 0.00 42.75 1.73
5383 7687 1.509463 CGCTGTTTGCCTGCATCAT 59.491 52.632 0.00 0.00 37.85 2.45
5415 7719 4.059773 TGGGCATGGGAAAGTCTAATTT 57.940 40.909 0.00 0.00 0.00 1.82
5428 7732 0.779358 TCAGGGGATTATGGGCATGG 59.221 55.000 0.00 0.00 0.00 3.66
5431 7735 4.823364 TTTAATCAGGGGATTATGGGCA 57.177 40.909 0.00 0.00 43.58 5.36
5488 7792 8.456471 TGAAGATAGCAATTCTTTTGTCATGAG 58.544 33.333 0.00 0.00 33.65 2.90
5541 7845 4.124851 AGGCTTCTTTATCTGTACACCG 57.875 45.455 0.00 0.00 0.00 4.94
5562 7866 6.533723 CGTATTTTGGTGCTGACACTTCTATA 59.466 38.462 0.00 0.00 46.57 1.31
5694 8000 5.939764 TGACAGCTCCACTAATATGAAGT 57.060 39.130 0.00 0.00 0.00 3.01
5705 8011 2.808543 CAGGTAAACTTGACAGCTCCAC 59.191 50.000 0.00 0.00 0.00 4.02
5736 8042 3.769300 GGTGTGCCTGGATAAAGGAAAAT 59.231 43.478 0.00 0.00 40.02 1.82
5737 8043 3.161866 GGTGTGCCTGGATAAAGGAAAA 58.838 45.455 0.00 0.00 40.02 2.29
5742 8048 3.131046 GGAAATGGTGTGCCTGGATAAAG 59.869 47.826 0.00 0.00 35.27 1.85
5749 8055 1.535204 GGGTGGAAATGGTGTGCCTG 61.535 60.000 0.00 0.00 35.27 4.85
5834 8140 5.047802 GCTGACAATCTTCTGAAAATGGGAA 60.048 40.000 0.00 0.00 0.00 3.97
5948 8254 0.319383 GCAGATCCACGATGCTCGAT 60.319 55.000 11.64 0.00 43.74 3.59
5995 8308 8.902806 CCACAAGCCAATAGATGTAAATTCTTA 58.097 33.333 0.00 0.00 0.00 2.10
6021 8334 1.188863 ATCAGCCCAAATTCCTGCAC 58.811 50.000 0.00 0.00 0.00 4.57
6456 8790 2.039879 ACAAAACCTCCACCGAAGCTAT 59.960 45.455 0.00 0.00 0.00 2.97
6509 8843 7.550906 GCTGATACATAAGAGGAGAAAACAGTT 59.449 37.037 0.00 0.00 0.00 3.16
6511 8845 7.044181 TGCTGATACATAAGAGGAGAAAACAG 58.956 38.462 0.00 0.00 0.00 3.16
6513 8847 9.202273 CTATGCTGATACATAAGAGGAGAAAAC 57.798 37.037 0.00 0.00 32.29 2.43
6514 8848 9.147732 TCTATGCTGATACATAAGAGGAGAAAA 57.852 33.333 0.00 0.00 32.29 2.29
6517 8851 7.559533 GGATCTATGCTGATACATAAGAGGAGA 59.440 40.741 0.00 0.00 32.29 3.71
6518 8852 7.201902 GGGATCTATGCTGATACATAAGAGGAG 60.202 44.444 0.00 0.00 32.29 3.69
6519 8853 6.609212 GGGATCTATGCTGATACATAAGAGGA 59.391 42.308 0.00 0.00 32.29 3.71
6520 8854 6.382282 TGGGATCTATGCTGATACATAAGAGG 59.618 42.308 0.00 0.00 32.29 3.69
6522 8856 6.127619 CGTGGGATCTATGCTGATACATAAGA 60.128 42.308 0.00 0.00 32.29 2.10
6523 8857 6.038985 CGTGGGATCTATGCTGATACATAAG 58.961 44.000 0.00 0.00 32.29 1.73
6524 8858 5.624509 GCGTGGGATCTATGCTGATACATAA 60.625 44.000 7.25 0.00 32.29 1.90
6540 8874 0.249120 TTGTTCATCTCGCGTGGGAT 59.751 50.000 5.25 5.25 0.00 3.85
6546 8880 3.519908 TGTCTTTTTGTTCATCTCGCG 57.480 42.857 0.00 0.00 0.00 5.87
6603 8937 9.855021 AAATAAAAACCTTCGATCTTGTTATGG 57.145 29.630 0.00 0.00 0.00 2.74
6671 9007 8.184192 GTGATTGACGGAAAAACTTCATATCAT 58.816 33.333 0.00 0.00 0.00 2.45
6754 9093 3.140325 TGGCTAGCAGTTGTTTAGCTT 57.860 42.857 18.24 0.00 39.70 3.74
6765 9104 0.108186 TCACGGAACATGGCTAGCAG 60.108 55.000 18.24 8.28 0.00 4.24
6771 9110 1.453155 AGACATTCACGGAACATGGC 58.547 50.000 0.00 0.00 0.00 4.40
6780 9119 8.858003 AGTATTACTCATGTTAGACATTCACG 57.142 34.615 0.00 0.00 36.53 4.35
6824 9281 4.279145 TGGTCGAGGAGATTAAGCTACTT 58.721 43.478 6.97 0.00 0.00 2.24
6891 9469 2.233676 TGGATTCGCTAGAAGCTGTTCA 59.766 45.455 0.00 0.00 42.05 3.18
6905 9483 4.451435 CCTGTGATGATTGAGATGGATTCG 59.549 45.833 0.00 0.00 0.00 3.34
6931 9509 7.391148 TCCCAAGCACTAATGAAAAGTAATC 57.609 36.000 0.00 0.00 0.00 1.75
6939 9517 4.079253 GGTCTTTCCCAAGCACTAATGAA 58.921 43.478 0.00 0.00 0.00 2.57
7012 9590 6.072112 TGAGGGCGCAATTATATTTTCTTC 57.928 37.500 10.83 0.00 0.00 2.87
7026 9604 0.251634 TGTGTGATAATGAGGGCGCA 59.748 50.000 10.83 0.00 0.00 6.09
7066 9644 3.069586 GTCATTCACACCGGATGGATCTA 59.930 47.826 9.46 0.00 39.21 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.