Multiple sequence alignment - TraesCS6B01G206000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G206000 chr6B 100.000 2936 0 0 1 2936 258236288 258233353 0.000000e+00 5422
1 TraesCS6B01G206000 chr6B 95.543 359 16 0 1 359 237738613 237738971 2.540000e-160 575
2 TraesCS6B01G206000 chr6B 93.939 99 6 0 360 458 562472960 562473058 1.820000e-32 150
3 TraesCS6B01G206000 chr6D 93.619 1332 58 13 488 1804 147123714 147125033 0.000000e+00 1964
4 TraesCS6B01G206000 chr6D 97.205 966 23 4 1973 2935 147125190 147126154 0.000000e+00 1631
5 TraesCS6B01G206000 chr6A 93.781 997 43 5 826 1804 200448113 200447118 0.000000e+00 1480
6 TraesCS6B01G206000 chr6A 96.333 409 14 1 1963 2370 200446927 200446519 0.000000e+00 671
7 TraesCS6B01G206000 chr6A 85.165 364 26 11 488 831 200450150 200449795 6.020000e-92 348
8 TraesCS6B01G206000 chr2B 93.817 372 23 0 1 372 699395535 699395906 7.110000e-156 560
9 TraesCS6B01G206000 chr2B 94.949 99 4 1 360 458 106304246 106304149 1.410000e-33 154
10 TraesCS6B01G206000 chr2B 93.814 97 5 1 360 456 69120971 69120876 8.480000e-31 145
11 TraesCS6B01G206000 chr2B 92.000 100 7 1 357 456 132035371 132035469 3.950000e-29 139
12 TraesCS6B01G206000 chr2B 92.784 97 6 1 361 457 200223256 200223161 3.950000e-29 139
13 TraesCS6B01G206000 chr4B 93.784 370 22 1 1 369 406344539 406344170 3.310000e-154 555
14 TraesCS6B01G206000 chr3B 93.750 368 22 1 1 367 168734886 168735253 4.280000e-153 551
15 TraesCS6B01G206000 chr3B 93.496 369 21 3 1 368 761226293 761226659 1.990000e-151 545
16 TraesCS6B01G206000 chr3B 93.261 371 22 3 1 369 621679221 621678852 7.160000e-151 544
17 TraesCS6B01G206000 chr3B 92.593 378 22 6 1 376 66320969 66321342 3.330000e-149 538
18 TraesCS6B01G206000 chr3B 92.973 370 25 1 1 369 535541851 535542220 3.330000e-149 538
19 TraesCS6B01G206000 chr3B 92.935 368 26 0 1 368 193585575 193585942 1.200000e-148 536
20 TraesCS6B01G206000 chr3B 91.304 391 29 5 1 389 212620317 212620704 2.000000e-146 529
21 TraesCS6B01G206000 chr3B 92.929 99 6 1 360 458 684235472 684235375 3.050000e-30 143
22 TraesCS6B01G206000 chr7D 87.730 326 33 6 2463 2783 485624519 485624842 9.940000e-100 374
23 TraesCS6B01G206000 chr7D 88.424 311 31 4 2463 2769 485700513 485700822 1.290000e-98 370
24 TraesCS6B01G206000 chr7D 84.049 326 35 7 2463 2774 289443416 289443094 6.150000e-77 298
25 TraesCS6B01G206000 chr1B 85.586 333 35 4 2464 2783 530994327 530994659 1.300000e-88 337
26 TraesCS6B01G206000 chr5B 85.152 330 28 8 2467 2775 453988251 453987922 4.720000e-83 318
27 TraesCS6B01G206000 chr5B 94.340 106 5 1 360 465 540908920 540908816 8.420000e-36 161
28 TraesCS6B01G206000 chr5B 97.778 90 2 0 360 449 533753212 533753123 3.920000e-34 156
29 TraesCS6B01G206000 chr5B 93.878 98 5 1 360 457 596922670 596922574 2.360000e-31 147
30 TraesCS6B01G206000 chr7A 86.139 303 28 9 2467 2763 116544773 116545067 6.110000e-82 315
31 TraesCS6B01G206000 chr7A 86.864 236 22 5 2464 2691 707145256 707145022 3.750000e-64 255
32 TraesCS6B01G206000 chr5D 81.613 310 41 10 2467 2769 458723408 458723108 2.920000e-60 243


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G206000 chr6B 258233353 258236288 2935 True 5422.0 5422 100.000000 1 2936 1 chr6B.!!$R1 2935
1 TraesCS6B01G206000 chr6D 147123714 147126154 2440 False 1797.5 1964 95.412000 488 2935 2 chr6D.!!$F1 2447
2 TraesCS6B01G206000 chr6A 200446519 200450150 3631 True 833.0 1480 91.759667 488 2370 3 chr6A.!!$R1 1882

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
403 404 0.031585 TCTTGTTCGGGTCTGTGACG 59.968 55.0 0.00 0.0 32.65 4.35 F
857 2563 0.179086 AAACGACGTGTTAACCGGGT 60.179 50.0 6.32 0.0 40.84 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1817 3541 0.037303 ACAGTGTTGAGATGCAGGGG 59.963 55.0 0.0 0.0 0.0 4.79 R
2719 4517 0.174845 CGAACCTGAAGCCCGACATA 59.825 55.0 0.0 0.0 0.0 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.956987 CGTGGAAGGCAAGCTTGG 59.043 61.111 27.10 9.80 0.00 3.61
31 32 2.709475 GGCAAGCTTGGCGATACG 59.291 61.111 33.68 4.49 43.97 3.06
32 33 2.709475 GCAAGCTTGGCGATACGG 59.291 61.111 27.10 0.00 0.00 4.02
33 34 1.813753 GCAAGCTTGGCGATACGGA 60.814 57.895 27.10 0.00 0.00 4.69
34 35 1.160329 GCAAGCTTGGCGATACGGAT 61.160 55.000 27.10 0.00 0.00 4.18
35 36 1.872237 GCAAGCTTGGCGATACGGATA 60.872 52.381 27.10 0.00 0.00 2.59
36 37 2.688507 CAAGCTTGGCGATACGGATAT 58.311 47.619 19.14 0.00 0.00 1.63
37 38 2.370281 AGCTTGGCGATACGGATATG 57.630 50.000 0.00 0.00 0.00 1.78
38 39 1.618837 AGCTTGGCGATACGGATATGT 59.381 47.619 0.00 0.00 0.00 2.29
39 40 2.823747 AGCTTGGCGATACGGATATGTA 59.176 45.455 0.00 0.00 0.00 2.29
40 41 3.119459 AGCTTGGCGATACGGATATGTAG 60.119 47.826 0.00 0.00 0.00 2.74
41 42 3.119602 GCTTGGCGATACGGATATGTAGA 60.120 47.826 0.00 0.00 0.00 2.59
42 43 4.440250 GCTTGGCGATACGGATATGTAGAT 60.440 45.833 0.00 0.00 0.00 1.98
43 44 4.895224 TGGCGATACGGATATGTAGATC 57.105 45.455 0.00 0.00 0.00 2.75
44 45 4.524053 TGGCGATACGGATATGTAGATCT 58.476 43.478 0.00 0.00 0.00 2.75
45 46 4.575236 TGGCGATACGGATATGTAGATCTC 59.425 45.833 0.00 0.00 0.00 2.75
46 47 4.023878 GGCGATACGGATATGTAGATCTCC 60.024 50.000 0.00 0.00 0.00 3.71
47 48 4.817464 GCGATACGGATATGTAGATCTCCT 59.183 45.833 0.00 0.00 0.00 3.69
48 49 5.990386 GCGATACGGATATGTAGATCTCCTA 59.010 44.000 0.00 0.00 0.00 2.94
49 50 6.651643 GCGATACGGATATGTAGATCTCCTAT 59.348 42.308 0.00 0.00 0.00 2.57
50 51 7.148540 GCGATACGGATATGTAGATCTCCTATC 60.149 44.444 0.00 4.68 0.00 2.08
51 52 7.332430 CGATACGGATATGTAGATCTCCTATCC 59.668 44.444 19.19 19.19 36.19 2.59
52 53 6.584471 ACGGATATGTAGATCTCCTATCCT 57.416 41.667 22.95 14.13 37.00 3.24
53 54 6.975949 ACGGATATGTAGATCTCCTATCCTT 58.024 40.000 22.95 16.70 37.00 3.36
54 55 6.831353 ACGGATATGTAGATCTCCTATCCTTG 59.169 42.308 22.95 16.11 37.00 3.61
55 56 6.831353 CGGATATGTAGATCTCCTATCCTTGT 59.169 42.308 22.95 0.00 37.00 3.16
56 57 7.993758 CGGATATGTAGATCTCCTATCCTTGTA 59.006 40.741 22.95 0.00 37.00 2.41
57 58 9.702253 GGATATGTAGATCTCCTATCCTTGTAA 57.298 37.037 20.62 0.00 36.47 2.41
59 60 7.784470 ATGTAGATCTCCTATCCTTGTAACC 57.216 40.000 0.00 0.00 0.00 2.85
60 61 5.768662 TGTAGATCTCCTATCCTTGTAACCG 59.231 44.000 0.00 0.00 0.00 4.44
61 62 5.063017 AGATCTCCTATCCTTGTAACCGA 57.937 43.478 0.00 0.00 0.00 4.69
62 63 4.828387 AGATCTCCTATCCTTGTAACCGAC 59.172 45.833 0.00 0.00 0.00 4.79
63 64 4.246712 TCTCCTATCCTTGTAACCGACT 57.753 45.455 0.00 0.00 0.00 4.18
64 65 4.607239 TCTCCTATCCTTGTAACCGACTT 58.393 43.478 0.00 0.00 0.00 3.01
65 66 5.021458 TCTCCTATCCTTGTAACCGACTTT 58.979 41.667 0.00 0.00 0.00 2.66
66 67 6.189859 TCTCCTATCCTTGTAACCGACTTTA 58.810 40.000 0.00 0.00 0.00 1.85
67 68 6.837568 TCTCCTATCCTTGTAACCGACTTTAT 59.162 38.462 0.00 0.00 0.00 1.40
68 69 6.812998 TCCTATCCTTGTAACCGACTTTATG 58.187 40.000 0.00 0.00 0.00 1.90
69 70 6.381994 TCCTATCCTTGTAACCGACTTTATGT 59.618 38.462 0.00 0.00 0.00 2.29
70 71 7.560991 TCCTATCCTTGTAACCGACTTTATGTA 59.439 37.037 0.00 0.00 0.00 2.29
71 72 8.199449 CCTATCCTTGTAACCGACTTTATGTAA 58.801 37.037 0.00 0.00 0.00 2.41
72 73 7.838771 ATCCTTGTAACCGACTTTATGTAAC 57.161 36.000 0.00 0.00 0.00 2.50
73 74 6.165577 TCCTTGTAACCGACTTTATGTAACC 58.834 40.000 0.00 0.00 0.00 2.85
74 75 5.352293 CCTTGTAACCGACTTTATGTAACCC 59.648 44.000 0.00 0.00 0.00 4.11
75 76 5.743636 TGTAACCGACTTTATGTAACCCT 57.256 39.130 0.00 0.00 0.00 4.34
76 77 6.849085 TGTAACCGACTTTATGTAACCCTA 57.151 37.500 0.00 0.00 0.00 3.53
77 78 6.866480 TGTAACCGACTTTATGTAACCCTAG 58.134 40.000 0.00 0.00 0.00 3.02
78 79 4.397481 ACCGACTTTATGTAACCCTAGC 57.603 45.455 0.00 0.00 0.00 3.42
79 80 3.133542 ACCGACTTTATGTAACCCTAGCC 59.866 47.826 0.00 0.00 0.00 3.93
80 81 3.493873 CCGACTTTATGTAACCCTAGCCC 60.494 52.174 0.00 0.00 0.00 5.19
81 82 3.387050 CGACTTTATGTAACCCTAGCCCT 59.613 47.826 0.00 0.00 0.00 5.19
82 83 4.501058 CGACTTTATGTAACCCTAGCCCTC 60.501 50.000 0.00 0.00 0.00 4.30
83 84 4.632292 ACTTTATGTAACCCTAGCCCTCT 58.368 43.478 0.00 0.00 0.00 3.69
84 85 4.654724 ACTTTATGTAACCCTAGCCCTCTC 59.345 45.833 0.00 0.00 0.00 3.20
85 86 2.104669 ATGTAACCCTAGCCCTCTCC 57.895 55.000 0.00 0.00 0.00 3.71
86 87 0.396695 TGTAACCCTAGCCCTCTCCG 60.397 60.000 0.00 0.00 0.00 4.63
87 88 1.114119 GTAACCCTAGCCCTCTCCGG 61.114 65.000 0.00 0.00 0.00 5.14
88 89 1.587522 TAACCCTAGCCCTCTCCGGT 61.588 60.000 0.00 0.00 0.00 5.28
89 90 2.840102 CCCTAGCCCTCTCCGGTG 60.840 72.222 0.00 0.00 0.00 4.94
90 91 2.042843 CCTAGCCCTCTCCGGTGT 60.043 66.667 0.00 0.00 0.00 4.16
91 92 2.128507 CCTAGCCCTCTCCGGTGTC 61.129 68.421 0.00 0.00 0.00 3.67
92 93 1.076632 CTAGCCCTCTCCGGTGTCT 60.077 63.158 0.00 0.00 0.00 3.41
93 94 0.183014 CTAGCCCTCTCCGGTGTCTA 59.817 60.000 0.00 0.05 0.00 2.59
94 95 0.851469 TAGCCCTCTCCGGTGTCTAT 59.149 55.000 0.00 0.00 0.00 1.98
95 96 0.851469 AGCCCTCTCCGGTGTCTATA 59.149 55.000 0.00 0.00 0.00 1.31
96 97 1.429687 AGCCCTCTCCGGTGTCTATAT 59.570 52.381 0.00 0.00 0.00 0.86
97 98 2.648304 AGCCCTCTCCGGTGTCTATATA 59.352 50.000 0.00 0.00 0.00 0.86
98 99 3.075582 AGCCCTCTCCGGTGTCTATATAA 59.924 47.826 0.00 0.00 0.00 0.98
99 100 3.830755 GCCCTCTCCGGTGTCTATATAAA 59.169 47.826 0.00 0.00 0.00 1.40
100 101 4.321824 GCCCTCTCCGGTGTCTATATAAAC 60.322 50.000 0.00 0.00 0.00 2.01
101 102 5.078256 CCCTCTCCGGTGTCTATATAAACT 58.922 45.833 0.00 0.00 0.00 2.66
102 103 5.047943 CCCTCTCCGGTGTCTATATAAACTG 60.048 48.000 0.00 0.00 0.00 3.16
103 104 5.047943 CCTCTCCGGTGTCTATATAAACTGG 60.048 48.000 0.00 9.86 39.94 4.00
104 105 5.698104 TCTCCGGTGTCTATATAAACTGGA 58.302 41.667 15.01 15.01 44.08 3.86
106 107 4.831155 TCCGGTGTCTATATAAACTGGAGG 59.169 45.833 0.00 2.13 41.98 4.30
107 108 4.021368 CCGGTGTCTATATAAACTGGAGGG 60.021 50.000 10.35 0.00 40.88 4.30
108 109 4.587684 CGGTGTCTATATAAACTGGAGGGT 59.412 45.833 0.00 0.00 0.00 4.34
109 110 5.070047 CGGTGTCTATATAAACTGGAGGGTT 59.930 44.000 0.00 0.00 0.00 4.11
110 111 6.407752 CGGTGTCTATATAAACTGGAGGGTTT 60.408 42.308 0.00 0.00 41.51 3.27
111 112 7.344134 GGTGTCTATATAAACTGGAGGGTTTT 58.656 38.462 0.00 0.00 39.66 2.43
112 113 8.488668 GGTGTCTATATAAACTGGAGGGTTTTA 58.511 37.037 0.00 0.00 39.66 1.52
113 114 9.543783 GTGTCTATATAAACTGGAGGGTTTTAG 57.456 37.037 0.00 0.00 39.66 1.85
114 115 9.275572 TGTCTATATAAACTGGAGGGTTTTAGT 57.724 33.333 0.00 0.00 39.66 2.24
115 116 9.761504 GTCTATATAAACTGGAGGGTTTTAGTC 57.238 37.037 0.00 0.00 39.66 2.59
116 117 8.931568 TCTATATAAACTGGAGGGTTTTAGTCC 58.068 37.037 0.00 0.00 39.66 3.85
117 118 2.853235 AACTGGAGGGTTTTAGTCCG 57.147 50.000 0.00 0.00 32.51 4.79
118 119 1.725803 ACTGGAGGGTTTTAGTCCGT 58.274 50.000 0.00 0.00 32.51 4.69
119 120 2.893424 ACTGGAGGGTTTTAGTCCGTA 58.107 47.619 0.00 0.00 32.51 4.02
120 121 2.830321 ACTGGAGGGTTTTAGTCCGTAG 59.170 50.000 0.00 0.00 32.51 3.51
121 122 7.261853 AAACTGGAGGGTTTTAGTCCGTAGG 62.262 48.000 0.00 0.00 42.35 3.18
139 140 6.686130 CGTAGGACGAACAATAATCATACC 57.314 41.667 0.00 0.00 46.05 2.73
140 141 6.210796 CGTAGGACGAACAATAATCATACCA 58.789 40.000 0.00 0.00 46.05 3.25
141 142 6.866770 CGTAGGACGAACAATAATCATACCAT 59.133 38.462 0.00 0.00 46.05 3.55
142 143 8.024865 CGTAGGACGAACAATAATCATACCATA 58.975 37.037 0.00 0.00 46.05 2.74
143 144 9.355215 GTAGGACGAACAATAATCATACCATAG 57.645 37.037 0.00 0.00 0.00 2.23
144 145 7.963532 AGGACGAACAATAATCATACCATAGT 58.036 34.615 0.00 0.00 0.00 2.12
145 146 8.088981 AGGACGAACAATAATCATACCATAGTC 58.911 37.037 0.00 0.00 0.00 2.59
146 147 8.088981 GGACGAACAATAATCATACCATAGTCT 58.911 37.037 0.00 0.00 0.00 3.24
149 150 9.077674 CGAACAATAATCATACCATAGTCTAGC 57.922 37.037 0.00 0.00 0.00 3.42
157 158 7.540474 TCATACCATAGTCTAGCTTTTAGGG 57.460 40.000 0.00 0.00 0.00 3.53
158 159 7.073854 TCATACCATAGTCTAGCTTTTAGGGT 58.926 38.462 0.00 0.00 0.00 4.34
159 160 7.567622 TCATACCATAGTCTAGCTTTTAGGGTT 59.432 37.037 0.00 0.00 0.00 4.11
160 161 6.638021 ACCATAGTCTAGCTTTTAGGGTTT 57.362 37.500 0.00 0.00 0.00 3.27
161 162 7.744678 ACCATAGTCTAGCTTTTAGGGTTTA 57.255 36.000 0.00 0.00 0.00 2.01
162 163 7.793036 ACCATAGTCTAGCTTTTAGGGTTTAG 58.207 38.462 0.00 0.00 0.00 1.85
163 164 6.706716 CCATAGTCTAGCTTTTAGGGTTTAGC 59.293 42.308 0.00 0.00 0.00 3.09
164 165 5.100344 AGTCTAGCTTTTAGGGTTTAGCC 57.900 43.478 0.00 0.00 34.19 3.93
165 166 4.783763 AGTCTAGCTTTTAGGGTTTAGCCT 59.216 41.667 5.72 5.72 37.43 4.58
166 167 5.251005 AGTCTAGCTTTTAGGGTTTAGCCTT 59.749 40.000 5.72 0.00 37.43 4.35
167 168 5.585445 GTCTAGCTTTTAGGGTTTAGCCTTC 59.415 44.000 5.72 0.00 37.43 3.46
168 169 4.659529 AGCTTTTAGGGTTTAGCCTTCT 57.340 40.909 5.72 0.00 37.43 2.85
169 170 4.999310 AGCTTTTAGGGTTTAGCCTTCTT 58.001 39.130 5.72 0.00 37.43 2.52
170 171 4.767409 AGCTTTTAGGGTTTAGCCTTCTTG 59.233 41.667 5.72 0.00 37.43 3.02
171 172 4.765339 GCTTTTAGGGTTTAGCCTTCTTGA 59.235 41.667 5.72 0.00 37.43 3.02
172 173 5.419155 GCTTTTAGGGTTTAGCCTTCTTGAT 59.581 40.000 5.72 0.00 37.43 2.57
173 174 6.404844 GCTTTTAGGGTTTAGCCTTCTTGATC 60.405 42.308 5.72 0.00 37.43 2.92
174 175 6.388619 TTTAGGGTTTAGCCTTCTTGATCT 57.611 37.500 5.72 0.00 37.43 2.75
175 176 4.495690 AGGGTTTAGCCTTCTTGATCTC 57.504 45.455 0.00 0.00 37.43 2.75
176 177 3.118592 AGGGTTTAGCCTTCTTGATCTCG 60.119 47.826 0.00 0.00 37.43 4.04
177 178 3.369576 GGGTTTAGCCTTCTTGATCTCGT 60.370 47.826 0.00 0.00 37.43 4.18
178 179 3.619038 GGTTTAGCCTTCTTGATCTCGTG 59.381 47.826 0.00 0.00 0.00 4.35
179 180 3.526931 TTAGCCTTCTTGATCTCGTGG 57.473 47.619 0.00 0.00 0.00 4.94
180 181 1.270907 AGCCTTCTTGATCTCGTGGT 58.729 50.000 0.00 0.00 0.00 4.16
181 182 2.457598 AGCCTTCTTGATCTCGTGGTA 58.542 47.619 0.00 0.00 0.00 3.25
182 183 2.428890 AGCCTTCTTGATCTCGTGGTAG 59.571 50.000 0.00 0.00 0.00 3.18
183 184 2.427453 GCCTTCTTGATCTCGTGGTAGA 59.573 50.000 0.00 0.00 0.00 2.59
184 185 3.068873 GCCTTCTTGATCTCGTGGTAGAT 59.931 47.826 0.00 0.00 38.95 1.98
196 197 9.826574 GATCTCGTGGTAGATCTACTCTTATAT 57.173 37.037 27.68 16.60 45.64 0.86
200 201 9.664332 TCGTGGTAGATCTACTCTTATATTACC 57.336 37.037 27.68 13.13 36.36 2.85
201 202 8.891720 CGTGGTAGATCTACTCTTATATTACCC 58.108 40.741 27.68 10.66 36.36 3.69
202 203 9.750783 GTGGTAGATCTACTCTTATATTACCCA 57.249 37.037 27.68 12.88 36.36 4.51
223 224 8.353423 ACCCATACCATCAATATTAATCAAGC 57.647 34.615 0.00 0.00 0.00 4.01
224 225 7.949565 ACCCATACCATCAATATTAATCAAGCA 59.050 33.333 0.00 0.00 0.00 3.91
225 226 8.464404 CCCATACCATCAATATTAATCAAGCAG 58.536 37.037 0.00 0.00 0.00 4.24
226 227 8.464404 CCATACCATCAATATTAATCAAGCAGG 58.536 37.037 0.00 0.00 0.00 4.85
227 228 9.234827 CATACCATCAATATTAATCAAGCAGGA 57.765 33.333 0.00 0.00 0.00 3.86
228 229 7.756395 ACCATCAATATTAATCAAGCAGGAG 57.244 36.000 0.00 0.00 0.00 3.69
229 230 7.293073 ACCATCAATATTAATCAAGCAGGAGT 58.707 34.615 0.00 0.00 0.00 3.85
230 231 8.439971 ACCATCAATATTAATCAAGCAGGAGTA 58.560 33.333 0.00 0.00 0.00 2.59
231 232 8.944029 CCATCAATATTAATCAAGCAGGAGTAG 58.056 37.037 0.00 0.00 0.00 2.57
232 233 8.944029 CATCAATATTAATCAAGCAGGAGTAGG 58.056 37.037 0.00 0.00 0.00 3.18
233 234 8.262601 TCAATATTAATCAAGCAGGAGTAGGA 57.737 34.615 0.00 0.00 0.00 2.94
234 235 8.884323 TCAATATTAATCAAGCAGGAGTAGGAT 58.116 33.333 0.00 0.00 0.00 3.24
235 236 9.512588 CAATATTAATCAAGCAGGAGTAGGATT 57.487 33.333 0.00 0.00 0.00 3.01
239 240 8.732746 TTAATCAAGCAGGAGTAGGATTTTAC 57.267 34.615 0.00 0.00 0.00 2.01
240 241 5.099042 TCAAGCAGGAGTAGGATTTTACC 57.901 43.478 0.00 0.00 0.00 2.85
241 242 4.783227 TCAAGCAGGAGTAGGATTTTACCT 59.217 41.667 0.00 0.00 43.32 3.08
242 243 5.104900 TCAAGCAGGAGTAGGATTTTACCTC 60.105 44.000 0.00 0.00 41.00 3.85
243 244 3.712218 AGCAGGAGTAGGATTTTACCTCC 59.288 47.826 0.00 0.00 41.00 4.30
244 245 3.454812 GCAGGAGTAGGATTTTACCTCCA 59.545 47.826 6.76 0.00 41.00 3.86
245 246 4.683671 GCAGGAGTAGGATTTTACCTCCAC 60.684 50.000 6.76 0.00 41.00 4.02
246 247 4.038633 AGGAGTAGGATTTTACCTCCACC 58.961 47.826 6.76 0.00 41.00 4.61
247 248 3.181468 GGAGTAGGATTTTACCTCCACCG 60.181 52.174 0.00 0.00 41.00 4.94
248 249 3.703052 GAGTAGGATTTTACCTCCACCGA 59.297 47.826 0.00 0.00 41.00 4.69
249 250 3.705072 AGTAGGATTTTACCTCCACCGAG 59.295 47.826 0.00 0.00 41.00 4.63
250 251 2.829023 AGGATTTTACCTCCACCGAGA 58.171 47.619 0.00 0.00 38.52 4.04
251 252 2.766828 AGGATTTTACCTCCACCGAGAG 59.233 50.000 0.00 0.00 38.52 3.20
263 264 4.148825 CGAGAGGGCCCGAACCTG 62.149 72.222 18.44 1.23 38.79 4.00
264 265 3.787001 GAGAGGGCCCGAACCTGG 61.787 72.222 18.44 0.00 38.79 4.45
273 274 1.984066 CCCGAACCTGGGTAAAAACA 58.016 50.000 0.00 0.00 44.76 2.83
274 275 2.521126 CCCGAACCTGGGTAAAAACAT 58.479 47.619 0.00 0.00 44.76 2.71
275 276 2.894765 CCCGAACCTGGGTAAAAACATT 59.105 45.455 0.00 0.00 44.76 2.71
276 277 3.305744 CCCGAACCTGGGTAAAAACATTG 60.306 47.826 0.00 0.00 44.76 2.82
277 278 3.319689 CCGAACCTGGGTAAAAACATTGT 59.680 43.478 0.00 0.00 0.00 2.71
278 279 4.295051 CGAACCTGGGTAAAAACATTGTG 58.705 43.478 0.00 0.00 0.00 3.33
279 280 4.202070 CGAACCTGGGTAAAAACATTGTGT 60.202 41.667 0.00 0.00 0.00 3.72
280 281 4.929819 ACCTGGGTAAAAACATTGTGTC 57.070 40.909 0.00 0.00 0.00 3.67
281 282 3.639561 ACCTGGGTAAAAACATTGTGTCC 59.360 43.478 0.00 0.00 0.00 4.02
282 283 3.006430 CCTGGGTAAAAACATTGTGTCCC 59.994 47.826 0.00 0.00 31.92 4.46
283 284 3.895041 CTGGGTAAAAACATTGTGTCCCT 59.105 43.478 4.35 0.00 32.37 4.20
284 285 4.290942 TGGGTAAAAACATTGTGTCCCTT 58.709 39.130 4.35 0.00 32.37 3.95
285 286 4.342665 TGGGTAAAAACATTGTGTCCCTTC 59.657 41.667 4.35 0.00 32.37 3.46
286 287 4.587262 GGGTAAAAACATTGTGTCCCTTCT 59.413 41.667 0.00 0.00 29.50 2.85
287 288 5.069914 GGGTAAAAACATTGTGTCCCTTCTT 59.930 40.000 0.00 0.00 29.50 2.52
288 289 6.407639 GGGTAAAAACATTGTGTCCCTTCTTT 60.408 38.462 0.00 0.00 29.50 2.52
289 290 7.045416 GGTAAAAACATTGTGTCCCTTCTTTT 58.955 34.615 0.00 0.00 0.00 2.27
290 291 7.223971 GGTAAAAACATTGTGTCCCTTCTTTTC 59.776 37.037 0.00 0.00 0.00 2.29
291 292 6.544928 AAAACATTGTGTCCCTTCTTTTCT 57.455 33.333 0.00 0.00 0.00 2.52
292 293 5.520376 AACATTGTGTCCCTTCTTTTCTG 57.480 39.130 0.00 0.00 0.00 3.02
293 294 4.536765 ACATTGTGTCCCTTCTTTTCTGT 58.463 39.130 0.00 0.00 0.00 3.41
294 295 4.956075 ACATTGTGTCCCTTCTTTTCTGTT 59.044 37.500 0.00 0.00 0.00 3.16
295 296 6.126409 ACATTGTGTCCCTTCTTTTCTGTTA 58.874 36.000 0.00 0.00 0.00 2.41
296 297 6.039382 ACATTGTGTCCCTTCTTTTCTGTTAC 59.961 38.462 0.00 0.00 0.00 2.50
297 298 4.457466 TGTGTCCCTTCTTTTCTGTTACC 58.543 43.478 0.00 0.00 0.00 2.85
298 299 4.080243 TGTGTCCCTTCTTTTCTGTTACCA 60.080 41.667 0.00 0.00 0.00 3.25
299 300 5.070685 GTGTCCCTTCTTTTCTGTTACCAT 58.929 41.667 0.00 0.00 0.00 3.55
300 301 5.181433 GTGTCCCTTCTTTTCTGTTACCATC 59.819 44.000 0.00 0.00 0.00 3.51
301 302 4.700692 GTCCCTTCTTTTCTGTTACCATCC 59.299 45.833 0.00 0.00 0.00 3.51
302 303 3.689649 CCCTTCTTTTCTGTTACCATCCG 59.310 47.826 0.00 0.00 0.00 4.18
303 304 3.127030 CCTTCTTTTCTGTTACCATCCGC 59.873 47.826 0.00 0.00 0.00 5.54
304 305 2.706890 TCTTTTCTGTTACCATCCGCC 58.293 47.619 0.00 0.00 0.00 6.13
305 306 2.304761 TCTTTTCTGTTACCATCCGCCT 59.695 45.455 0.00 0.00 0.00 5.52
306 307 3.516300 TCTTTTCTGTTACCATCCGCCTA 59.484 43.478 0.00 0.00 0.00 3.93
307 308 3.536956 TTTCTGTTACCATCCGCCTAG 57.463 47.619 0.00 0.00 0.00 3.02
308 309 2.447408 TCTGTTACCATCCGCCTAGA 57.553 50.000 0.00 0.00 0.00 2.43
309 310 2.029623 TCTGTTACCATCCGCCTAGAC 58.970 52.381 0.00 0.00 0.00 2.59
310 311 0.742505 TGTTACCATCCGCCTAGACG 59.257 55.000 0.00 0.00 0.00 4.18
311 312 0.596859 GTTACCATCCGCCTAGACGC 60.597 60.000 0.00 0.00 0.00 5.19
312 313 1.038681 TTACCATCCGCCTAGACGCA 61.039 55.000 0.00 0.00 0.00 5.24
313 314 1.731433 TACCATCCGCCTAGACGCAC 61.731 60.000 0.00 0.00 0.00 5.34
314 315 2.494445 CATCCGCCTAGACGCACA 59.506 61.111 0.00 0.00 0.00 4.57
315 316 1.589993 CATCCGCCTAGACGCACAG 60.590 63.158 0.00 0.00 0.00 3.66
316 317 2.052690 ATCCGCCTAGACGCACAGT 61.053 57.895 0.00 0.00 0.00 3.55
317 318 1.605058 ATCCGCCTAGACGCACAGTT 61.605 55.000 0.00 0.00 0.00 3.16
318 319 1.805945 CCGCCTAGACGCACAGTTC 60.806 63.158 0.00 0.00 0.00 3.01
319 320 2.152699 CGCCTAGACGCACAGTTCG 61.153 63.158 0.00 0.00 0.00 3.95
320 321 1.805945 GCCTAGACGCACAGTTCGG 60.806 63.158 0.00 0.00 0.00 4.30
321 322 1.153823 CCTAGACGCACAGTTCGGG 60.154 63.158 0.00 0.00 0.00 5.14
322 323 1.592400 CCTAGACGCACAGTTCGGGA 61.592 60.000 0.00 0.00 0.00 5.14
323 324 0.456312 CTAGACGCACAGTTCGGGAC 60.456 60.000 0.00 0.00 0.00 4.46
324 325 1.870055 TAGACGCACAGTTCGGGACC 61.870 60.000 0.00 0.00 0.00 4.46
325 326 4.309950 ACGCACAGTTCGGGACCC 62.310 66.667 0.00 0.00 0.00 4.46
327 328 4.717313 GCACAGTTCGGGACCCCC 62.717 72.222 4.46 0.00 41.09 5.40
328 329 2.928396 CACAGTTCGGGACCCCCT 60.928 66.667 4.46 0.00 42.67 4.79
329 330 1.611261 CACAGTTCGGGACCCCCTA 60.611 63.158 4.46 0.00 42.67 3.53
330 331 1.611556 ACAGTTCGGGACCCCCTAC 60.612 63.158 4.46 0.29 42.67 3.18
331 332 2.040114 AGTTCGGGACCCCCTACC 59.960 66.667 4.46 0.00 42.67 3.18
332 333 3.085947 GTTCGGGACCCCCTACCC 61.086 72.222 4.46 0.00 42.67 3.69
336 337 3.759101 GGGACCCCCTACCCGAGA 61.759 72.222 0.00 0.00 41.34 4.04
337 338 2.613421 GGACCCCCTACCCGAGAT 59.387 66.667 0.00 0.00 0.00 2.75
338 339 1.533513 GGACCCCCTACCCGAGATC 60.534 68.421 0.00 0.00 0.00 2.75
339 340 1.533513 GACCCCCTACCCGAGATCC 60.534 68.421 0.00 0.00 0.00 3.36
340 341 2.600769 CCCCCTACCCGAGATCCG 60.601 72.222 0.00 0.00 38.18 4.18
341 342 3.303928 CCCCTACCCGAGATCCGC 61.304 72.222 0.00 0.00 36.84 5.54
342 343 3.303928 CCCTACCCGAGATCCGCC 61.304 72.222 0.00 0.00 36.84 6.13
343 344 3.671411 CCTACCCGAGATCCGCCG 61.671 72.222 0.00 0.00 36.84 6.46
344 345 3.671411 CTACCCGAGATCCGCCGG 61.671 72.222 0.00 0.00 44.94 6.13
345 346 4.511246 TACCCGAGATCCGCCGGT 62.511 66.667 1.63 11.60 43.93 5.28
347 348 4.157120 CCCGAGATCCGCCGGTTT 62.157 66.667 1.63 0.00 43.93 3.27
348 349 2.125269 CCGAGATCCGCCGGTTTT 60.125 61.111 1.63 0.00 40.78 2.43
349 350 2.461110 CCGAGATCCGCCGGTTTTG 61.461 63.158 1.63 0.00 40.78 2.44
350 351 1.447140 CGAGATCCGCCGGTTTTGA 60.447 57.895 1.63 0.00 0.00 2.69
351 352 1.693083 CGAGATCCGCCGGTTTTGAC 61.693 60.000 1.63 0.00 0.00 3.18
352 353 0.672401 GAGATCCGCCGGTTTTGACA 60.672 55.000 1.63 0.00 0.00 3.58
353 354 0.953960 AGATCCGCCGGTTTTGACAC 60.954 55.000 1.63 0.00 0.00 3.67
354 355 1.918868 GATCCGCCGGTTTTGACACC 61.919 60.000 1.63 0.00 0.00 4.16
361 362 1.278637 GGTTTTGACACCGACAGCG 59.721 57.895 0.00 0.00 37.24 5.18
362 363 1.155424 GGTTTTGACACCGACAGCGA 61.155 55.000 0.00 0.00 40.82 4.93
363 364 0.865769 GTTTTGACACCGACAGCGAT 59.134 50.000 0.00 0.00 40.82 4.58
364 365 0.865111 TTTTGACACCGACAGCGATG 59.135 50.000 0.00 0.00 40.82 3.84
365 366 0.249699 TTTGACACCGACAGCGATGT 60.250 50.000 5.74 5.74 40.82 3.06
366 367 0.249699 TTGACACCGACAGCGATGTT 60.250 50.000 8.15 0.00 40.82 2.71
367 368 0.249699 TGACACCGACAGCGATGTTT 60.250 50.000 8.15 0.00 40.82 2.83
368 369 0.438830 GACACCGACAGCGATGTTTC 59.561 55.000 8.15 0.00 40.82 2.78
378 379 2.244000 CGATGTTTCGCCTGTTGGT 58.756 52.632 0.00 0.00 38.75 3.67
379 380 0.591170 CGATGTTTCGCCTGTTGGTT 59.409 50.000 0.00 0.00 38.75 3.67
380 381 1.001815 CGATGTTTCGCCTGTTGGTTT 60.002 47.619 0.00 0.00 38.75 3.27
381 382 2.661594 GATGTTTCGCCTGTTGGTTTC 58.338 47.619 0.00 0.00 35.27 2.78
382 383 0.378962 TGTTTCGCCTGTTGGTTTCG 59.621 50.000 0.00 0.00 35.27 3.46
383 384 0.379316 GTTTCGCCTGTTGGTTTCGT 59.621 50.000 0.00 0.00 35.27 3.85
384 385 1.096416 TTTCGCCTGTTGGTTTCGTT 58.904 45.000 0.00 0.00 35.27 3.85
385 386 0.658897 TTCGCCTGTTGGTTTCGTTC 59.341 50.000 0.00 0.00 35.27 3.95
386 387 0.179067 TCGCCTGTTGGTTTCGTTCT 60.179 50.000 0.00 0.00 35.27 3.01
387 388 0.661020 CGCCTGTTGGTTTCGTTCTT 59.339 50.000 0.00 0.00 35.27 2.52
388 389 1.596954 CGCCTGTTGGTTTCGTTCTTG 60.597 52.381 0.00 0.00 35.27 3.02
389 390 1.404035 GCCTGTTGGTTTCGTTCTTGT 59.596 47.619 0.00 0.00 35.27 3.16
390 391 2.159296 GCCTGTTGGTTTCGTTCTTGTT 60.159 45.455 0.00 0.00 35.27 2.83
391 392 3.691498 CCTGTTGGTTTCGTTCTTGTTC 58.309 45.455 0.00 0.00 0.00 3.18
392 393 3.350912 CTGTTGGTTTCGTTCTTGTTCG 58.649 45.455 0.00 0.00 0.00 3.95
393 394 2.096174 TGTTGGTTTCGTTCTTGTTCGG 59.904 45.455 0.00 0.00 0.00 4.30
394 395 1.301423 TGGTTTCGTTCTTGTTCGGG 58.699 50.000 0.00 0.00 0.00 5.14
395 396 1.302366 GGTTTCGTTCTTGTTCGGGT 58.698 50.000 0.00 0.00 0.00 5.28
396 397 1.262417 GGTTTCGTTCTTGTTCGGGTC 59.738 52.381 0.00 0.00 0.00 4.46
397 398 2.207590 GTTTCGTTCTTGTTCGGGTCT 58.792 47.619 0.00 0.00 0.00 3.85
398 399 1.860676 TTCGTTCTTGTTCGGGTCTG 58.139 50.000 0.00 0.00 0.00 3.51
399 400 0.748450 TCGTTCTTGTTCGGGTCTGT 59.252 50.000 0.00 0.00 0.00 3.41
400 401 0.859232 CGTTCTTGTTCGGGTCTGTG 59.141 55.000 0.00 0.00 0.00 3.66
401 402 1.537348 CGTTCTTGTTCGGGTCTGTGA 60.537 52.381 0.00 0.00 0.00 3.58
402 403 1.865340 GTTCTTGTTCGGGTCTGTGAC 59.135 52.381 0.00 0.00 0.00 3.67
403 404 0.031585 TCTTGTTCGGGTCTGTGACG 59.968 55.000 0.00 0.00 32.65 4.35
404 405 1.557443 CTTGTTCGGGTCTGTGACGC 61.557 60.000 4.93 4.93 41.19 5.19
405 406 2.023414 TTGTTCGGGTCTGTGACGCT 62.023 55.000 11.80 0.00 42.18 5.07
406 407 2.022129 GTTCGGGTCTGTGACGCTG 61.022 63.158 11.80 6.70 42.18 5.18
407 408 3.858868 TTCGGGTCTGTGACGCTGC 62.859 63.158 11.80 0.00 42.18 5.25
409 410 4.314440 GGGTCTGTGACGCTGCCA 62.314 66.667 7.38 0.00 41.34 4.92
410 411 2.046892 GGTCTGTGACGCTGCCAT 60.047 61.111 0.00 0.00 32.65 4.40
411 412 2.393768 GGTCTGTGACGCTGCCATG 61.394 63.158 0.00 0.00 32.65 3.66
412 413 1.669115 GTCTGTGACGCTGCCATGT 60.669 57.895 0.00 0.00 0.00 3.21
413 414 1.668793 TCTGTGACGCTGCCATGTG 60.669 57.895 0.00 0.00 0.00 3.21
414 415 2.669229 TGTGACGCTGCCATGTGG 60.669 61.111 0.00 0.00 38.53 4.17
437 438 7.683437 GGCTTTATTTATAAAGTCGGGCTAT 57.317 36.000 18.51 0.00 46.78 2.97
438 439 7.527457 GGCTTTATTTATAAAGTCGGGCTATG 58.473 38.462 18.51 0.00 46.78 2.23
439 440 7.361799 GGCTTTATTTATAAAGTCGGGCTATGG 60.362 40.741 18.51 0.00 46.78 2.74
440 441 7.443259 TTTATTTATAAAGTCGGGCTATGGC 57.557 36.000 3.94 0.00 37.82 4.40
455 456 5.391312 GCTATGGCCTTTTCTCAGAAAAA 57.609 39.130 13.61 0.00 0.00 1.94
478 479 6.811253 AAAACATTTTAGTCGCTATGGACA 57.189 33.333 0.00 0.00 39.42 4.02
479 480 6.422776 AAACATTTTAGTCGCTATGGACAG 57.577 37.500 0.00 0.00 39.42 3.51
480 481 4.442706 ACATTTTAGTCGCTATGGACAGG 58.557 43.478 0.00 0.00 39.42 4.00
481 482 4.081087 ACATTTTAGTCGCTATGGACAGGT 60.081 41.667 0.00 0.00 39.42 4.00
482 483 3.520290 TTTAGTCGCTATGGACAGGTG 57.480 47.619 0.00 0.00 39.42 4.00
483 484 2.430248 TAGTCGCTATGGACAGGTGA 57.570 50.000 0.00 0.00 39.42 4.02
484 485 1.557099 AGTCGCTATGGACAGGTGAA 58.443 50.000 0.00 0.00 39.42 3.18
485 486 1.899814 AGTCGCTATGGACAGGTGAAA 59.100 47.619 0.00 0.00 39.42 2.69
486 487 2.000447 GTCGCTATGGACAGGTGAAAC 59.000 52.381 0.00 0.00 36.91 2.78
500 501 0.944386 TGAAACCTTCTGACTTGCGC 59.056 50.000 0.00 0.00 0.00 6.09
526 528 3.657537 GTGCAACGAATCCGACAAG 57.342 52.632 0.00 0.00 39.50 3.16
527 529 1.144969 GTGCAACGAATCCGACAAGA 58.855 50.000 0.00 0.00 39.50 3.02
535 537 2.939756 CGAATCCGACAAGAGAGAGAGA 59.060 50.000 0.00 0.00 38.22 3.10
539 541 0.248054 CGACAAGAGAGAGAGAGCGC 60.248 60.000 0.00 0.00 0.00 5.92
540 542 0.248054 GACAAGAGAGAGAGAGCGCG 60.248 60.000 0.00 0.00 0.00 6.86
585 593 1.247567 CCAGTTGCTTTTCCGATGGT 58.752 50.000 0.00 0.00 0.00 3.55
587 595 2.607771 CCAGTTGCTTTTCCGATGGTTG 60.608 50.000 0.00 0.00 0.00 3.77
617 625 4.084171 GGAACGTTCGCTAGTTAGCTTTTT 60.084 41.667 21.34 0.00 46.85 1.94
619 627 3.431233 ACGTTCGCTAGTTAGCTTTTTCC 59.569 43.478 9.28 0.00 46.85 3.13
621 629 4.092968 CGTTCGCTAGTTAGCTTTTTCCAT 59.907 41.667 9.28 0.00 46.85 3.41
639 647 3.117474 TCCATGGTTATTGGGCGGAAATA 60.117 43.478 12.58 0.00 34.85 1.40
666 675 2.804090 GTCGAACTCGGACCGCAC 60.804 66.667 9.66 0.00 40.29 5.34
782 801 2.668212 CACCGAGCCGAAAGCCAA 60.668 61.111 0.00 0.00 45.47 4.52
783 802 2.040544 CACCGAGCCGAAAGCCAAT 61.041 57.895 0.00 0.00 45.47 3.16
784 803 1.745489 ACCGAGCCGAAAGCCAATC 60.745 57.895 0.00 0.00 45.47 2.67
823 842 3.343617 CGTCCCAAACCAATCATGTACT 58.656 45.455 0.00 0.00 0.00 2.73
832 2538 6.732896 AACCAATCATGTACTCCTACTAGG 57.267 41.667 0.00 0.00 36.46 3.02
857 2563 0.179086 AAACGACGTGTTAACCGGGT 60.179 50.000 6.32 0.00 40.84 5.28
865 2571 2.221517 CGTGTTAACCGGGTACTGTTTG 59.778 50.000 6.32 0.00 0.00 2.93
944 2650 3.070159 TCTCACAGTGACTTTTGAGGAGG 59.930 47.826 16.86 0.00 36.84 4.30
1098 2815 0.687354 GAAGCAAGGAGGTCAGTGGA 59.313 55.000 0.00 0.00 0.00 4.02
1212 2935 5.791666 TCTTCCTATTCTCGTCGCTAGATA 58.208 41.667 0.00 0.00 0.00 1.98
1346 3069 2.281484 GTCAGGAAGCGCCACCAA 60.281 61.111 19.89 7.21 40.02 3.67
1431 3155 4.997395 TGTTGTTCTATCTCTTCTTGGTGC 59.003 41.667 0.00 0.00 0.00 5.01
1484 3208 8.184192 GTGTCATTGATCTAAGGGTTTTGTATG 58.816 37.037 0.00 0.00 0.00 2.39
1763 3487 6.942532 CACCATTTTAGTGCACTGGTATAT 57.057 37.500 29.57 11.98 38.13 0.86
1765 3489 7.771183 CACCATTTTAGTGCACTGGTATATTT 58.229 34.615 29.57 1.79 38.13 1.40
1766 3490 8.250332 CACCATTTTAGTGCACTGGTATATTTT 58.750 33.333 29.57 0.97 38.13 1.82
1767 3491 8.466798 ACCATTTTAGTGCACTGGTATATTTTC 58.533 33.333 29.57 0.00 38.41 2.29
1776 3500 5.175859 CACTGGTATATTTTCAGTCCGTGT 58.824 41.667 0.00 0.00 39.43 4.49
1804 3528 2.358258 TCTGGAATTGGTCTTCCCCTT 58.642 47.619 0.67 0.00 43.47 3.95
1805 3529 2.041620 TCTGGAATTGGTCTTCCCCTTG 59.958 50.000 0.67 0.00 43.47 3.61
1806 3530 1.186200 GGAATTGGTCTTCCCCTTGC 58.814 55.000 0.00 0.00 39.06 4.01
1807 3531 1.272704 GGAATTGGTCTTCCCCTTGCT 60.273 52.381 0.00 0.00 39.06 3.91
1808 3532 2.529632 GAATTGGTCTTCCCCTTGCTT 58.470 47.619 0.00 0.00 0.00 3.91
1809 3533 2.702270 ATTGGTCTTCCCCTTGCTTT 57.298 45.000 0.00 0.00 0.00 3.51
1810 3534 1.703411 TTGGTCTTCCCCTTGCTTTG 58.297 50.000 0.00 0.00 0.00 2.77
1811 3535 0.827507 TGGTCTTCCCCTTGCTTTGC 60.828 55.000 0.00 0.00 0.00 3.68
1812 3536 0.540597 GGTCTTCCCCTTGCTTTGCT 60.541 55.000 0.00 0.00 0.00 3.91
1813 3537 0.600057 GTCTTCCCCTTGCTTTGCTG 59.400 55.000 0.00 0.00 0.00 4.41
1814 3538 0.478072 TCTTCCCCTTGCTTTGCTGA 59.522 50.000 0.00 0.00 0.00 4.26
1815 3539 1.076024 TCTTCCCCTTGCTTTGCTGAT 59.924 47.619 0.00 0.00 0.00 2.90
1816 3540 1.203994 CTTCCCCTTGCTTTGCTGATG 59.796 52.381 0.00 0.00 0.00 3.07
1817 3541 1.217244 CCCCTTGCTTTGCTGATGC 59.783 57.895 0.00 0.00 40.20 3.91
1818 3542 1.217244 CCCTTGCTTTGCTGATGCC 59.783 57.895 0.00 0.00 38.71 4.40
1819 3543 1.217244 CCTTGCTTTGCTGATGCCC 59.783 57.895 0.00 0.00 38.71 5.36
1820 3544 1.217244 CTTGCTTTGCTGATGCCCC 59.783 57.895 0.00 0.00 38.71 5.80
1821 3545 1.228956 TTGCTTTGCTGATGCCCCT 60.229 52.632 0.00 0.00 38.71 4.79
1840 3564 3.402110 CCTGCATCTCAACACTGTACAA 58.598 45.455 0.00 0.00 0.00 2.41
1849 3573 4.109766 TCAACACTGTACAACAAGAGACG 58.890 43.478 0.00 0.00 0.00 4.18
1854 3578 3.181479 ACTGTACAACAAGAGACGCAGAA 60.181 43.478 0.00 0.00 0.00 3.02
1856 3580 3.740832 TGTACAACAAGAGACGCAGAATG 59.259 43.478 0.00 0.00 40.87 2.67
1873 3597 6.568462 CGCAGAATGAGAAAACTGTGGTATTT 60.568 38.462 0.00 0.00 38.60 1.40
1874 3598 7.360861 CGCAGAATGAGAAAACTGTGGTATTTA 60.361 37.037 0.00 0.00 38.60 1.40
1875 3599 7.965107 GCAGAATGAGAAAACTGTGGTATTTAG 59.035 37.037 0.00 0.00 39.69 1.85
1877 3601 7.665559 AGAATGAGAAAACTGTGGTATTTAGCA 59.334 33.333 0.00 0.00 0.00 3.49
1896 3657 3.062763 GCAAGATGCATACATACGCTCT 58.937 45.455 0.00 0.00 44.26 4.09
1899 3660 5.674008 CAAGATGCATACATACGCTCTTTC 58.326 41.667 0.00 0.00 36.35 2.62
1904 3665 5.656480 TGCATACATACGCTCTTTCTTGTA 58.344 37.500 0.00 0.00 0.00 2.41
1909 3670 4.389077 ACATACGCTCTTTCTTGTAGTTGC 59.611 41.667 0.00 0.00 0.00 4.17
1913 3674 3.120854 CGCTCTTTCTTGTAGTTGCTGTC 60.121 47.826 0.00 0.00 0.00 3.51
1921 3682 5.294356 TCTTGTAGTTGCTGTCGTACAATT 58.706 37.500 0.00 0.00 35.42 2.32
1935 3696 6.092944 TGTCGTACAATTTCAGTCTGTTGTTT 59.907 34.615 11.33 0.00 36.34 2.83
1947 3708 6.265196 TCAGTCTGTTGTTTTTGCCTATGATT 59.735 34.615 0.00 0.00 0.00 2.57
1948 3709 6.583806 CAGTCTGTTGTTTTTGCCTATGATTC 59.416 38.462 0.00 0.00 0.00 2.52
1949 3710 6.265196 AGTCTGTTGTTTTTGCCTATGATTCA 59.735 34.615 0.00 0.00 0.00 2.57
1950 3711 6.363357 GTCTGTTGTTTTTGCCTATGATTCAC 59.637 38.462 0.00 0.00 0.00 3.18
1951 3712 6.040278 TCTGTTGTTTTTGCCTATGATTCACA 59.960 34.615 0.00 0.00 0.00 3.58
1952 3713 5.982516 TGTTGTTTTTGCCTATGATTCACAC 59.017 36.000 0.00 0.00 0.00 3.82
1953 3714 5.781210 TGTTTTTGCCTATGATTCACACA 57.219 34.783 0.00 0.00 0.00 3.72
1954 3715 6.154203 TGTTTTTGCCTATGATTCACACAA 57.846 33.333 0.00 0.00 0.00 3.33
1955 3716 6.577103 TGTTTTTGCCTATGATTCACACAAA 58.423 32.000 0.00 0.00 0.00 2.83
1956 3717 6.478344 TGTTTTTGCCTATGATTCACACAAAC 59.522 34.615 8.62 8.62 0.00 2.93
1957 3718 4.418013 TTGCCTATGATTCACACAAACG 57.582 40.909 0.00 0.00 0.00 3.60
1958 3719 2.161410 TGCCTATGATTCACACAAACGC 59.839 45.455 0.00 0.00 0.00 4.84
1959 3720 2.420022 GCCTATGATTCACACAAACGCT 59.580 45.455 0.00 0.00 0.00 5.07
1960 3721 3.728864 GCCTATGATTCACACAAACGCTG 60.729 47.826 0.00 0.00 0.00 5.18
1962 3723 0.310543 TGATTCACACAAACGCTGCC 59.689 50.000 0.00 0.00 0.00 4.85
1963 3724 0.593128 GATTCACACAAACGCTGCCT 59.407 50.000 0.00 0.00 0.00 4.75
1964 3725 0.593128 ATTCACACAAACGCTGCCTC 59.407 50.000 0.00 0.00 0.00 4.70
1965 3726 0.463654 TTCACACAAACGCTGCCTCT 60.464 50.000 0.00 0.00 0.00 3.69
1966 3727 0.880278 TCACACAAACGCTGCCTCTC 60.880 55.000 0.00 0.00 0.00 3.20
1992 3789 4.704965 TCTCTCCATTTCTGCATCATCTG 58.295 43.478 0.00 0.00 0.00 2.90
2092 3889 2.679837 GCCAATATGAGCCATGTATCCG 59.320 50.000 0.00 0.00 0.00 4.18
2386 4183 4.743018 CCCACAAAGGCCGATCTT 57.257 55.556 0.00 0.00 35.39 2.40
2389 4186 1.243342 CCACAAAGGCCGATCTTGCA 61.243 55.000 0.00 0.00 0.00 4.08
2540 4337 1.204704 CGAAGGAAAAATCCCAAGCCC 59.795 52.381 0.00 0.00 0.00 5.19
2546 4343 2.155197 AAAATCCCAAGCCCGAGCCT 62.155 55.000 0.00 0.00 41.25 4.58
2678 4475 2.418628 CGAGCTTTATTTGGGCTTTCGA 59.581 45.455 0.00 0.00 36.37 3.71
2705 4503 0.034896 TCGGGTGAGAAAGTGAAGCC 59.965 55.000 0.00 0.00 0.00 4.35
2715 4513 2.749441 GTGAAGCCTGAGCCTGGC 60.749 66.667 11.65 11.65 46.61 4.85
2916 4716 2.512896 CTGCCTGCCCATAGTCCC 59.487 66.667 0.00 0.00 0.00 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.126703 TTGCCTTCCACGCCAAGGA 62.127 57.895 10.97 0.00 42.94 3.36
1 2 2.597217 TTGCCTTCCACGCCAAGG 60.597 61.111 3.73 3.73 43.13 3.61
2 3 2.956987 CTTGCCTTCCACGCCAAG 59.043 61.111 0.00 0.00 0.00 3.61
3 4 3.294493 GCTTGCCTTCCACGCCAA 61.294 61.111 0.00 0.00 32.93 4.52
4 5 3.790416 AAGCTTGCCTTCCACGCCA 62.790 57.895 0.00 0.00 39.36 5.69
5 6 2.985847 AAGCTTGCCTTCCACGCC 60.986 61.111 0.00 0.00 39.36 5.68
6 7 2.256461 CAAGCTTGCCTTCCACGC 59.744 61.111 14.65 0.00 38.87 5.34
7 8 2.956987 CCAAGCTTGCCTTCCACG 59.043 61.111 21.43 0.62 0.00 4.94
8 9 2.653115 GCCAAGCTTGCCTTCCAC 59.347 61.111 21.43 0.12 0.00 4.02
9 10 2.769652 ATCGCCAAGCTTGCCTTCCA 62.770 55.000 21.43 1.33 0.00 3.53
10 11 0.748005 TATCGCCAAGCTTGCCTTCC 60.748 55.000 21.43 5.26 0.00 3.46
11 12 0.378610 GTATCGCCAAGCTTGCCTTC 59.621 55.000 21.43 8.32 0.00 3.46
12 13 1.369091 CGTATCGCCAAGCTTGCCTT 61.369 55.000 21.43 7.68 0.00 4.35
13 14 1.815421 CGTATCGCCAAGCTTGCCT 60.815 57.895 21.43 7.17 0.00 4.75
14 15 2.709475 CGTATCGCCAAGCTTGCC 59.291 61.111 21.43 9.45 0.00 4.52
15 16 1.160329 ATCCGTATCGCCAAGCTTGC 61.160 55.000 21.43 14.85 0.00 4.01
16 17 2.148916 TATCCGTATCGCCAAGCTTG 57.851 50.000 19.93 19.93 0.00 4.01
17 18 2.037251 ACATATCCGTATCGCCAAGCTT 59.963 45.455 0.00 0.00 0.00 3.74
18 19 1.618837 ACATATCCGTATCGCCAAGCT 59.381 47.619 0.00 0.00 0.00 3.74
19 20 2.080286 ACATATCCGTATCGCCAAGC 57.920 50.000 0.00 0.00 0.00 4.01
20 21 4.696899 TCTACATATCCGTATCGCCAAG 57.303 45.455 0.00 0.00 0.00 3.61
21 22 4.948004 AGATCTACATATCCGTATCGCCAA 59.052 41.667 0.00 0.00 0.00 4.52
22 23 4.524053 AGATCTACATATCCGTATCGCCA 58.476 43.478 0.00 0.00 0.00 5.69
23 24 4.023878 GGAGATCTACATATCCGTATCGCC 60.024 50.000 0.00 0.00 30.60 5.54
24 25 4.817464 AGGAGATCTACATATCCGTATCGC 59.183 45.833 7.93 0.00 44.22 4.58
25 26 7.332430 GGATAGGAGATCTACATATCCGTATCG 59.668 44.444 19.45 0.00 44.22 2.92
26 27 8.380099 AGGATAGGAGATCTACATATCCGTATC 58.620 40.741 23.80 16.71 44.22 2.24
27 28 8.282801 AGGATAGGAGATCTACATATCCGTAT 57.717 38.462 23.80 13.15 44.22 3.06
28 29 7.693533 AGGATAGGAGATCTACATATCCGTA 57.306 40.000 23.80 8.25 44.22 4.02
29 30 6.584471 AGGATAGGAGATCTACATATCCGT 57.416 41.667 23.80 15.87 44.22 4.69
30 31 6.831353 ACAAGGATAGGAGATCTACATATCCG 59.169 42.308 23.80 17.83 44.22 4.18
31 32 9.702253 TTACAAGGATAGGAGATCTACATATCC 57.298 37.037 23.25 23.25 40.35 2.59
33 34 9.482175 GGTTACAAGGATAGGAGATCTACATAT 57.518 37.037 7.93 2.32 0.00 1.78
34 35 7.610692 CGGTTACAAGGATAGGAGATCTACATA 59.389 40.741 7.93 0.00 0.00 2.29
35 36 6.434652 CGGTTACAAGGATAGGAGATCTACAT 59.565 42.308 7.93 0.00 0.00 2.29
36 37 5.768662 CGGTTACAAGGATAGGAGATCTACA 59.231 44.000 7.93 0.00 0.00 2.74
37 38 6.002704 TCGGTTACAAGGATAGGAGATCTAC 58.997 44.000 0.00 0.00 0.00 2.59
38 39 6.002704 GTCGGTTACAAGGATAGGAGATCTA 58.997 44.000 0.00 0.00 0.00 1.98
39 40 4.828387 GTCGGTTACAAGGATAGGAGATCT 59.172 45.833 0.00 0.00 0.00 2.75
40 41 4.828387 AGTCGGTTACAAGGATAGGAGATC 59.172 45.833 0.00 0.00 0.00 2.75
41 42 4.805744 AGTCGGTTACAAGGATAGGAGAT 58.194 43.478 0.00 0.00 0.00 2.75
42 43 4.246712 AGTCGGTTACAAGGATAGGAGA 57.753 45.455 0.00 0.00 0.00 3.71
43 44 5.340439 AAAGTCGGTTACAAGGATAGGAG 57.660 43.478 0.00 0.00 0.00 3.69
44 45 6.381994 ACATAAAGTCGGTTACAAGGATAGGA 59.618 38.462 0.00 0.00 0.00 2.94
45 46 6.579865 ACATAAAGTCGGTTACAAGGATAGG 58.420 40.000 0.00 0.00 0.00 2.57
46 47 9.028185 GTTACATAAAGTCGGTTACAAGGATAG 57.972 37.037 0.00 0.00 0.00 2.08
47 48 7.981225 GGTTACATAAAGTCGGTTACAAGGATA 59.019 37.037 0.00 0.00 0.00 2.59
48 49 6.820152 GGTTACATAAAGTCGGTTACAAGGAT 59.180 38.462 0.00 0.00 0.00 3.24
49 50 6.165577 GGTTACATAAAGTCGGTTACAAGGA 58.834 40.000 0.00 0.00 0.00 3.36
50 51 5.352293 GGGTTACATAAAGTCGGTTACAAGG 59.648 44.000 0.00 0.00 0.00 3.61
51 52 6.168389 AGGGTTACATAAAGTCGGTTACAAG 58.832 40.000 0.00 0.00 0.00 3.16
52 53 6.112927 AGGGTTACATAAAGTCGGTTACAA 57.887 37.500 0.00 0.00 0.00 2.41
53 54 5.743636 AGGGTTACATAAAGTCGGTTACA 57.256 39.130 0.00 0.00 0.00 2.41
54 55 5.750547 GCTAGGGTTACATAAAGTCGGTTAC 59.249 44.000 0.00 0.00 0.00 2.50
55 56 5.163416 GGCTAGGGTTACATAAAGTCGGTTA 60.163 44.000 0.00 0.00 0.00 2.85
56 57 4.383444 GGCTAGGGTTACATAAAGTCGGTT 60.383 45.833 0.00 0.00 0.00 4.44
57 58 3.133542 GGCTAGGGTTACATAAAGTCGGT 59.866 47.826 0.00 0.00 0.00 4.69
58 59 3.493873 GGGCTAGGGTTACATAAAGTCGG 60.494 52.174 0.00 0.00 0.00 4.79
59 60 3.387050 AGGGCTAGGGTTACATAAAGTCG 59.613 47.826 0.00 0.00 0.00 4.18
60 61 4.654724 AGAGGGCTAGGGTTACATAAAGTC 59.345 45.833 0.00 0.00 0.00 3.01
61 62 4.632292 AGAGGGCTAGGGTTACATAAAGT 58.368 43.478 0.00 0.00 0.00 2.66
62 63 4.040584 GGAGAGGGCTAGGGTTACATAAAG 59.959 50.000 0.00 0.00 0.00 1.85
63 64 3.971971 GGAGAGGGCTAGGGTTACATAAA 59.028 47.826 0.00 0.00 0.00 1.40
64 65 3.584294 GGAGAGGGCTAGGGTTACATAA 58.416 50.000 0.00 0.00 0.00 1.90
65 66 2.490351 CGGAGAGGGCTAGGGTTACATA 60.490 54.545 0.00 0.00 0.00 2.29
66 67 1.758123 CGGAGAGGGCTAGGGTTACAT 60.758 57.143 0.00 0.00 0.00 2.29
67 68 0.396695 CGGAGAGGGCTAGGGTTACA 60.397 60.000 0.00 0.00 0.00 2.41
68 69 1.114119 CCGGAGAGGGCTAGGGTTAC 61.114 65.000 0.00 0.00 35.97 2.50
69 70 1.232216 CCGGAGAGGGCTAGGGTTA 59.768 63.158 0.00 0.00 35.97 2.85
70 71 2.041819 CCGGAGAGGGCTAGGGTT 60.042 66.667 0.00 0.00 35.97 4.11
71 72 3.357082 ACCGGAGAGGGCTAGGGT 61.357 66.667 9.46 0.00 46.96 4.34
72 73 2.840102 CACCGGAGAGGGCTAGGG 60.840 72.222 9.46 0.00 46.96 3.53
73 74 2.042843 ACACCGGAGAGGGCTAGG 60.043 66.667 9.46 0.00 46.96 3.02
74 75 0.183014 TAGACACCGGAGAGGGCTAG 59.817 60.000 9.46 0.00 46.96 3.42
75 76 0.851469 ATAGACACCGGAGAGGGCTA 59.149 55.000 9.46 6.85 46.96 3.93
76 77 0.851469 TATAGACACCGGAGAGGGCT 59.149 55.000 9.46 4.41 46.96 5.19
77 78 1.926108 ATATAGACACCGGAGAGGGC 58.074 55.000 9.46 0.00 46.96 5.19
78 79 5.047943 CAGTTTATATAGACACCGGAGAGGG 60.048 48.000 9.46 0.00 46.96 4.30
80 81 5.768662 TCCAGTTTATATAGACACCGGAGAG 59.231 44.000 9.46 0.00 0.00 3.20
81 82 5.698104 TCCAGTTTATATAGACACCGGAGA 58.302 41.667 9.46 0.00 0.00 3.71
82 83 5.047943 CCTCCAGTTTATATAGACACCGGAG 60.048 48.000 9.46 19.42 36.81 4.63
83 84 4.831155 CCTCCAGTTTATATAGACACCGGA 59.169 45.833 9.46 7.37 0.00 5.14
84 85 4.021368 CCCTCCAGTTTATATAGACACCGG 60.021 50.000 0.00 0.00 0.00 5.28
85 86 4.587684 ACCCTCCAGTTTATATAGACACCG 59.412 45.833 6.22 0.00 0.00 4.94
86 87 6.496144 AACCCTCCAGTTTATATAGACACC 57.504 41.667 6.22 0.00 0.00 4.16
87 88 9.543783 CTAAAACCCTCCAGTTTATATAGACAC 57.456 37.037 6.22 0.00 39.00 3.67
88 89 9.275572 ACTAAAACCCTCCAGTTTATATAGACA 57.724 33.333 6.22 0.00 39.00 3.41
89 90 9.761504 GACTAAAACCCTCCAGTTTATATAGAC 57.238 37.037 0.00 0.00 39.00 2.59
90 91 8.931568 GGACTAAAACCCTCCAGTTTATATAGA 58.068 37.037 0.00 0.00 39.00 1.98
91 92 7.871463 CGGACTAAAACCCTCCAGTTTATATAG 59.129 40.741 0.00 0.00 39.00 1.31
92 93 7.345392 ACGGACTAAAACCCTCCAGTTTATATA 59.655 37.037 0.00 0.00 39.00 0.86
93 94 6.157471 ACGGACTAAAACCCTCCAGTTTATAT 59.843 38.462 0.00 0.00 39.00 0.86
94 95 5.484998 ACGGACTAAAACCCTCCAGTTTATA 59.515 40.000 0.00 0.00 39.00 0.98
95 96 4.287845 ACGGACTAAAACCCTCCAGTTTAT 59.712 41.667 0.00 0.00 39.00 1.40
96 97 3.647590 ACGGACTAAAACCCTCCAGTTTA 59.352 43.478 0.00 0.00 39.00 2.01
97 98 2.440627 ACGGACTAAAACCCTCCAGTTT 59.559 45.455 0.00 0.00 41.67 2.66
98 99 2.052468 ACGGACTAAAACCCTCCAGTT 58.948 47.619 0.00 0.00 0.00 3.16
99 100 1.725803 ACGGACTAAAACCCTCCAGT 58.274 50.000 0.00 0.00 0.00 4.00
100 101 2.167900 CCTACGGACTAAAACCCTCCAG 59.832 54.545 0.00 0.00 0.00 3.86
101 102 2.181975 CCTACGGACTAAAACCCTCCA 58.818 52.381 0.00 0.00 0.00 3.86
102 103 2.460669 TCCTACGGACTAAAACCCTCC 58.539 52.381 0.00 0.00 0.00 4.30
114 115 4.987408 TGATTATTGTTCGTCCTACGGA 57.013 40.909 0.00 0.00 42.81 4.69
115 116 5.632347 GGTATGATTATTGTTCGTCCTACGG 59.368 44.000 0.00 0.00 42.81 4.02
116 117 6.210796 TGGTATGATTATTGTTCGTCCTACG 58.789 40.000 0.00 0.00 44.19 3.51
117 118 9.355215 CTATGGTATGATTATTGTTCGTCCTAC 57.645 37.037 0.00 0.00 0.00 3.18
118 119 9.085645 ACTATGGTATGATTATTGTTCGTCCTA 57.914 33.333 0.00 0.00 0.00 2.94
119 120 7.963532 ACTATGGTATGATTATTGTTCGTCCT 58.036 34.615 0.00 0.00 0.00 3.85
120 121 8.088981 AGACTATGGTATGATTATTGTTCGTCC 58.911 37.037 0.00 0.00 0.00 4.79
123 124 9.077674 GCTAGACTATGGTATGATTATTGTTCG 57.922 37.037 0.00 0.00 0.00 3.95
131 132 8.598041 CCCTAAAAGCTAGACTATGGTATGATT 58.402 37.037 0.00 0.00 0.00 2.57
132 133 7.735321 ACCCTAAAAGCTAGACTATGGTATGAT 59.265 37.037 0.00 0.00 0.00 2.45
133 134 7.073854 ACCCTAAAAGCTAGACTATGGTATGA 58.926 38.462 0.00 0.00 0.00 2.15
134 135 7.304497 ACCCTAAAAGCTAGACTATGGTATG 57.696 40.000 0.00 0.00 0.00 2.39
135 136 7.932683 AACCCTAAAAGCTAGACTATGGTAT 57.067 36.000 0.00 0.00 0.00 2.73
136 137 7.744678 AAACCCTAAAAGCTAGACTATGGTA 57.255 36.000 0.00 0.00 0.00 3.25
137 138 6.638021 AAACCCTAAAAGCTAGACTATGGT 57.362 37.500 0.00 0.00 0.00 3.55
138 139 6.706716 GCTAAACCCTAAAAGCTAGACTATGG 59.293 42.308 0.00 0.00 32.18 2.74
139 140 6.706716 GGCTAAACCCTAAAAGCTAGACTATG 59.293 42.308 0.00 0.00 35.30 2.23
140 141 6.616137 AGGCTAAACCCTAAAAGCTAGACTAT 59.384 38.462 0.00 0.00 40.58 2.12
141 142 5.962641 AGGCTAAACCCTAAAAGCTAGACTA 59.037 40.000 0.00 0.00 40.58 2.59
142 143 4.783763 AGGCTAAACCCTAAAAGCTAGACT 59.216 41.667 0.00 0.00 40.58 3.24
143 144 5.100344 AGGCTAAACCCTAAAAGCTAGAC 57.900 43.478 0.00 0.00 40.58 2.59
144 145 5.487845 AGAAGGCTAAACCCTAAAAGCTAGA 59.512 40.000 0.00 0.00 40.58 2.43
145 146 5.746284 AGAAGGCTAAACCCTAAAAGCTAG 58.254 41.667 0.00 0.00 40.58 3.42
146 147 5.774102 AGAAGGCTAAACCCTAAAAGCTA 57.226 39.130 0.00 0.00 40.58 3.32
147 148 4.659529 AGAAGGCTAAACCCTAAAAGCT 57.340 40.909 0.00 0.00 40.58 3.74
148 149 4.765339 TCAAGAAGGCTAAACCCTAAAAGC 59.235 41.667 0.00 0.00 40.58 3.51
149 150 6.887002 AGATCAAGAAGGCTAAACCCTAAAAG 59.113 38.462 0.00 0.00 40.58 2.27
150 151 6.790319 AGATCAAGAAGGCTAAACCCTAAAA 58.210 36.000 0.00 0.00 40.58 1.52
151 152 6.388619 AGATCAAGAAGGCTAAACCCTAAA 57.611 37.500 0.00 0.00 40.58 1.85
152 153 5.395324 CGAGATCAAGAAGGCTAAACCCTAA 60.395 44.000 0.00 0.00 40.58 2.69
153 154 4.099573 CGAGATCAAGAAGGCTAAACCCTA 59.900 45.833 0.00 0.00 40.58 3.53
154 155 3.118592 CGAGATCAAGAAGGCTAAACCCT 60.119 47.826 0.00 0.00 40.58 4.34
155 156 3.198872 CGAGATCAAGAAGGCTAAACCC 58.801 50.000 0.00 0.00 40.58 4.11
156 157 3.619038 CACGAGATCAAGAAGGCTAAACC 59.381 47.826 0.00 0.00 39.61 3.27
157 158 3.619038 CCACGAGATCAAGAAGGCTAAAC 59.381 47.826 0.00 0.00 0.00 2.01
158 159 3.260884 ACCACGAGATCAAGAAGGCTAAA 59.739 43.478 0.00 0.00 0.00 1.85
159 160 2.832129 ACCACGAGATCAAGAAGGCTAA 59.168 45.455 0.00 0.00 0.00 3.09
160 161 2.457598 ACCACGAGATCAAGAAGGCTA 58.542 47.619 0.00 0.00 0.00 3.93
161 162 1.270907 ACCACGAGATCAAGAAGGCT 58.729 50.000 0.00 0.00 0.00 4.58
162 163 2.427453 TCTACCACGAGATCAAGAAGGC 59.573 50.000 0.00 0.00 0.00 4.35
163 164 4.927978 ATCTACCACGAGATCAAGAAGG 57.072 45.455 0.00 0.00 29.85 3.46
174 175 9.664332 GGTAATATAAGAGTAGATCTACCACGA 57.336 37.037 25.93 15.06 37.23 4.35
175 176 8.891720 GGGTAATATAAGAGTAGATCTACCACG 58.108 40.741 25.93 0.00 37.23 4.94
176 177 9.750783 TGGGTAATATAAGAGTAGATCTACCAC 57.249 37.037 25.93 20.17 37.23 4.16
197 198 9.461312 GCTTGATTAATATTGATGGTATGGGTA 57.539 33.333 0.00 0.00 0.00 3.69
198 199 7.949565 TGCTTGATTAATATTGATGGTATGGGT 59.050 33.333 0.00 0.00 0.00 4.51
199 200 8.352137 TGCTTGATTAATATTGATGGTATGGG 57.648 34.615 0.00 0.00 0.00 4.00
200 201 8.464404 CCTGCTTGATTAATATTGATGGTATGG 58.536 37.037 0.00 0.00 0.00 2.74
201 202 9.234827 TCCTGCTTGATTAATATTGATGGTATG 57.765 33.333 0.00 0.00 0.00 2.39
202 203 9.458727 CTCCTGCTTGATTAATATTGATGGTAT 57.541 33.333 0.00 0.00 0.00 2.73
203 204 8.439971 ACTCCTGCTTGATTAATATTGATGGTA 58.560 33.333 0.00 0.00 0.00 3.25
204 205 7.293073 ACTCCTGCTTGATTAATATTGATGGT 58.707 34.615 0.00 0.00 0.00 3.55
205 206 7.756395 ACTCCTGCTTGATTAATATTGATGG 57.244 36.000 0.00 0.00 0.00 3.51
206 207 8.944029 CCTACTCCTGCTTGATTAATATTGATG 58.056 37.037 0.00 0.00 0.00 3.07
207 208 8.884323 TCCTACTCCTGCTTGATTAATATTGAT 58.116 33.333 0.00 0.00 0.00 2.57
208 209 8.262601 TCCTACTCCTGCTTGATTAATATTGA 57.737 34.615 0.00 0.00 0.00 2.57
209 210 9.512588 AATCCTACTCCTGCTTGATTAATATTG 57.487 33.333 0.00 0.00 0.00 1.90
213 214 9.343539 GTAAAATCCTACTCCTGCTTGATTAAT 57.656 33.333 0.00 0.00 0.00 1.40
214 215 7.773690 GGTAAAATCCTACTCCTGCTTGATTAA 59.226 37.037 0.00 0.00 0.00 1.40
215 216 7.127339 AGGTAAAATCCTACTCCTGCTTGATTA 59.873 37.037 0.00 0.00 35.87 1.75
216 217 6.069381 AGGTAAAATCCTACTCCTGCTTGATT 60.069 38.462 0.00 0.00 35.87 2.57
217 218 5.430089 AGGTAAAATCCTACTCCTGCTTGAT 59.570 40.000 0.00 0.00 35.87 2.57
218 219 4.783227 AGGTAAAATCCTACTCCTGCTTGA 59.217 41.667 0.00 0.00 35.87 3.02
219 220 5.104259 AGGTAAAATCCTACTCCTGCTTG 57.896 43.478 0.00 0.00 35.87 4.01
220 221 4.164413 GGAGGTAAAATCCTACTCCTGCTT 59.836 45.833 0.00 0.00 38.02 3.91
221 222 3.712218 GGAGGTAAAATCCTACTCCTGCT 59.288 47.826 0.00 0.00 38.02 4.24
222 223 3.454812 TGGAGGTAAAATCCTACTCCTGC 59.545 47.826 10.05 0.00 39.12 4.85
223 224 4.141688 GGTGGAGGTAAAATCCTACTCCTG 60.142 50.000 10.05 0.00 44.41 3.86
224 225 4.038633 GGTGGAGGTAAAATCCTACTCCT 58.961 47.826 10.05 0.00 44.41 3.69
225 226 3.181468 CGGTGGAGGTAAAATCCTACTCC 60.181 52.174 0.00 0.00 44.38 3.85
226 227 3.703052 TCGGTGGAGGTAAAATCCTACTC 59.297 47.826 0.00 0.00 39.12 2.59
227 228 3.705072 CTCGGTGGAGGTAAAATCCTACT 59.295 47.826 0.00 0.00 39.12 2.57
228 229 3.703052 TCTCGGTGGAGGTAAAATCCTAC 59.297 47.826 0.00 0.00 40.85 3.18
229 230 3.958798 CTCTCGGTGGAGGTAAAATCCTA 59.041 47.826 0.00 0.00 40.85 2.94
230 231 2.766828 CTCTCGGTGGAGGTAAAATCCT 59.233 50.000 0.00 0.00 40.85 3.24
231 232 2.158943 CCTCTCGGTGGAGGTAAAATCC 60.159 54.545 10.43 0.00 45.65 3.01
232 233 3.180891 CCTCTCGGTGGAGGTAAAATC 57.819 52.381 10.43 0.00 45.65 2.17
243 244 4.452733 GTTCGGGCCCTCTCGGTG 62.453 72.222 22.43 1.43 0.00 4.94
246 247 4.148825 CAGGTTCGGGCCCTCTCG 62.149 72.222 22.43 6.49 0.00 4.04
247 248 3.787001 CCAGGTTCGGGCCCTCTC 61.787 72.222 22.43 9.34 0.00 3.20
255 256 3.319689 ACAATGTTTTTACCCAGGTTCGG 59.680 43.478 0.00 0.00 0.00 4.30
256 257 4.202070 ACACAATGTTTTTACCCAGGTTCG 60.202 41.667 0.00 0.00 0.00 3.95
257 258 5.270893 ACACAATGTTTTTACCCAGGTTC 57.729 39.130 0.00 0.00 0.00 3.62
258 259 4.100344 GGACACAATGTTTTTACCCAGGTT 59.900 41.667 0.00 0.00 0.00 3.50
259 260 3.639561 GGACACAATGTTTTTACCCAGGT 59.360 43.478 0.00 0.00 0.00 4.00
260 261 3.006430 GGGACACAATGTTTTTACCCAGG 59.994 47.826 0.00 0.00 36.47 4.45
261 262 3.895041 AGGGACACAATGTTTTTACCCAG 59.105 43.478 0.00 0.00 38.62 4.45
262 263 3.917300 AGGGACACAATGTTTTTACCCA 58.083 40.909 0.00 0.00 38.62 4.51
263 264 4.587262 AGAAGGGACACAATGTTTTTACCC 59.413 41.667 0.00 0.00 36.67 3.69
264 265 5.784578 AGAAGGGACACAATGTTTTTACC 57.215 39.130 0.00 0.00 0.00 2.85
265 266 7.979537 AGAAAAGAAGGGACACAATGTTTTTAC 59.020 33.333 0.00 0.00 0.00 2.01
266 267 7.978975 CAGAAAAGAAGGGACACAATGTTTTTA 59.021 33.333 0.00 0.00 0.00 1.52
267 268 6.818142 CAGAAAAGAAGGGACACAATGTTTTT 59.182 34.615 0.00 0.00 0.00 1.94
268 269 6.070824 ACAGAAAAGAAGGGACACAATGTTTT 60.071 34.615 0.00 0.00 0.00 2.43
269 270 5.422012 ACAGAAAAGAAGGGACACAATGTTT 59.578 36.000 0.00 0.00 0.00 2.83
270 271 4.956075 ACAGAAAAGAAGGGACACAATGTT 59.044 37.500 0.00 0.00 0.00 2.71
271 272 4.536765 ACAGAAAAGAAGGGACACAATGT 58.463 39.130 0.00 0.00 0.00 2.71
272 273 5.520376 AACAGAAAAGAAGGGACACAATG 57.480 39.130 0.00 0.00 0.00 2.82
273 274 5.535030 GGTAACAGAAAAGAAGGGACACAAT 59.465 40.000 0.00 0.00 0.00 2.71
274 275 4.885325 GGTAACAGAAAAGAAGGGACACAA 59.115 41.667 0.00 0.00 0.00 3.33
275 276 4.080243 TGGTAACAGAAAAGAAGGGACACA 60.080 41.667 0.00 0.00 46.17 3.72
276 277 4.457466 TGGTAACAGAAAAGAAGGGACAC 58.543 43.478 0.00 0.00 46.17 3.67
277 278 4.781775 TGGTAACAGAAAAGAAGGGACA 57.218 40.909 0.00 0.00 46.17 4.02
292 293 0.596859 GCGTCTAGGCGGATGGTAAC 60.597 60.000 19.86 0.00 0.00 2.50
293 294 1.038681 TGCGTCTAGGCGGATGGTAA 61.039 55.000 19.86 0.00 35.06 2.85
294 295 1.454295 TGCGTCTAGGCGGATGGTA 60.454 57.895 19.86 0.00 35.06 3.25
295 296 2.758327 TGCGTCTAGGCGGATGGT 60.758 61.111 19.86 0.00 35.06 3.55
296 297 2.279517 GTGCGTCTAGGCGGATGG 60.280 66.667 19.86 0.00 34.24 3.51
297 298 1.589993 CTGTGCGTCTAGGCGGATG 60.590 63.158 19.86 9.25 34.24 3.51
298 299 1.605058 AACTGTGCGTCTAGGCGGAT 61.605 55.000 19.86 0.00 34.24 4.18
299 300 2.209064 GAACTGTGCGTCTAGGCGGA 62.209 60.000 19.86 14.02 35.06 5.54
300 301 1.805945 GAACTGTGCGTCTAGGCGG 60.806 63.158 19.86 3.85 35.06 6.13
301 302 2.152699 CGAACTGTGCGTCTAGGCG 61.153 63.158 13.55 13.55 35.06 5.52
302 303 1.805945 CCGAACTGTGCGTCTAGGC 60.806 63.158 7.51 0.00 0.00 3.93
303 304 1.153823 CCCGAACTGTGCGTCTAGG 60.154 63.158 7.51 0.00 0.00 3.02
304 305 0.456312 GTCCCGAACTGTGCGTCTAG 60.456 60.000 7.51 0.00 0.00 2.43
305 306 1.582968 GTCCCGAACTGTGCGTCTA 59.417 57.895 7.51 0.00 0.00 2.59
306 307 2.338984 GTCCCGAACTGTGCGTCT 59.661 61.111 7.51 0.00 0.00 4.18
307 308 2.737376 GGTCCCGAACTGTGCGTC 60.737 66.667 7.51 0.00 0.00 5.19
308 309 4.309950 GGGTCCCGAACTGTGCGT 62.310 66.667 7.51 0.00 0.00 5.24
310 311 4.717313 GGGGGTCCCGAACTGTGC 62.717 72.222 0.48 0.00 36.85 4.57
319 320 3.097429 ATCTCGGGTAGGGGGTCCC 62.097 68.421 0.00 0.00 45.90 4.46
320 321 1.533513 GATCTCGGGTAGGGGGTCC 60.534 68.421 0.00 0.00 0.00 4.46
321 322 1.533513 GGATCTCGGGTAGGGGGTC 60.534 68.421 0.00 0.00 0.00 4.46
322 323 2.613421 GGATCTCGGGTAGGGGGT 59.387 66.667 0.00 0.00 0.00 4.95
323 324 2.600769 CGGATCTCGGGTAGGGGG 60.601 72.222 0.00 0.00 34.75 5.40
324 325 3.303928 GCGGATCTCGGGTAGGGG 61.304 72.222 5.87 0.00 39.69 4.79
325 326 3.303928 GGCGGATCTCGGGTAGGG 61.304 72.222 5.87 0.00 39.69 3.53
326 327 3.671411 CGGCGGATCTCGGGTAGG 61.671 72.222 0.00 0.00 39.69 3.18
327 328 3.671411 CCGGCGGATCTCGGGTAG 61.671 72.222 24.41 0.00 42.32 3.18
332 333 1.447140 TCAAAACCGGCGGATCTCG 60.447 57.895 35.78 16.34 42.76 4.04
333 334 0.672401 TGTCAAAACCGGCGGATCTC 60.672 55.000 35.78 16.90 0.00 2.75
334 335 0.953960 GTGTCAAAACCGGCGGATCT 60.954 55.000 35.78 13.84 0.00 2.75
335 336 1.500396 GTGTCAAAACCGGCGGATC 59.500 57.895 35.78 9.52 0.00 3.36
336 337 1.969589 GGTGTCAAAACCGGCGGAT 60.970 57.895 35.78 20.37 0.00 4.18
337 338 2.592287 GGTGTCAAAACCGGCGGA 60.592 61.111 35.78 6.54 0.00 5.54
343 344 1.155424 TCGCTGTCGGTGTCAAAACC 61.155 55.000 0.00 0.00 36.82 3.27
344 345 0.865769 ATCGCTGTCGGTGTCAAAAC 59.134 50.000 0.00 0.00 36.13 2.43
345 346 0.865111 CATCGCTGTCGGTGTCAAAA 59.135 50.000 0.00 0.00 41.64 2.44
346 347 2.527671 CATCGCTGTCGGTGTCAAA 58.472 52.632 0.00 0.00 41.64 2.69
347 348 4.260194 CATCGCTGTCGGTGTCAA 57.740 55.556 0.00 0.00 41.64 3.18
352 353 3.856508 CGAAACATCGCTGTCGGT 58.143 55.556 0.00 0.00 33.36 4.69
360 361 0.591170 AACCAACAGGCGAAACATCG 59.409 50.000 0.00 0.00 0.00 3.84
361 362 2.661594 GAAACCAACAGGCGAAACATC 58.338 47.619 0.00 0.00 0.00 3.06
362 363 1.001815 CGAAACCAACAGGCGAAACAT 60.002 47.619 0.00 0.00 0.00 2.71
363 364 0.378962 CGAAACCAACAGGCGAAACA 59.621 50.000 0.00 0.00 0.00 2.83
364 365 0.379316 ACGAAACCAACAGGCGAAAC 59.621 50.000 0.00 0.00 0.00 2.78
365 366 1.064357 GAACGAAACCAACAGGCGAAA 59.936 47.619 0.00 0.00 0.00 3.46
366 367 0.658897 GAACGAAACCAACAGGCGAA 59.341 50.000 0.00 0.00 0.00 4.70
367 368 0.179067 AGAACGAAACCAACAGGCGA 60.179 50.000 0.00 0.00 0.00 5.54
368 369 0.661020 AAGAACGAAACCAACAGGCG 59.339 50.000 0.00 0.00 0.00 5.52
369 370 1.404035 ACAAGAACGAAACCAACAGGC 59.596 47.619 0.00 0.00 0.00 4.85
370 371 3.691498 GAACAAGAACGAAACCAACAGG 58.309 45.455 0.00 0.00 0.00 4.00
371 372 3.350912 CGAACAAGAACGAAACCAACAG 58.649 45.455 0.00 0.00 0.00 3.16
372 373 2.096174 CCGAACAAGAACGAAACCAACA 59.904 45.455 0.00 0.00 0.00 3.33
373 374 2.540157 CCCGAACAAGAACGAAACCAAC 60.540 50.000 0.00 0.00 0.00 3.77
374 375 1.671845 CCCGAACAAGAACGAAACCAA 59.328 47.619 0.00 0.00 0.00 3.67
375 376 1.301423 CCCGAACAAGAACGAAACCA 58.699 50.000 0.00 0.00 0.00 3.67
376 377 1.262417 GACCCGAACAAGAACGAAACC 59.738 52.381 0.00 0.00 0.00 3.27
377 378 2.033151 CAGACCCGAACAAGAACGAAAC 60.033 50.000 0.00 0.00 0.00 2.78
378 379 2.206750 CAGACCCGAACAAGAACGAAA 58.793 47.619 0.00 0.00 0.00 3.46
379 380 1.137479 ACAGACCCGAACAAGAACGAA 59.863 47.619 0.00 0.00 0.00 3.85
380 381 0.748450 ACAGACCCGAACAAGAACGA 59.252 50.000 0.00 0.00 0.00 3.85
381 382 0.859232 CACAGACCCGAACAAGAACG 59.141 55.000 0.00 0.00 0.00 3.95
382 383 1.865340 GTCACAGACCCGAACAAGAAC 59.135 52.381 0.00 0.00 0.00 3.01
383 384 1.537348 CGTCACAGACCCGAACAAGAA 60.537 52.381 0.00 0.00 0.00 2.52
384 385 0.031585 CGTCACAGACCCGAACAAGA 59.968 55.000 0.00 0.00 0.00 3.02
385 386 1.557443 GCGTCACAGACCCGAACAAG 61.557 60.000 0.00 0.00 0.00 3.16
386 387 1.593209 GCGTCACAGACCCGAACAA 60.593 57.895 0.00 0.00 0.00 2.83
387 388 2.028484 GCGTCACAGACCCGAACA 59.972 61.111 0.00 0.00 0.00 3.18
388 389 2.022129 CAGCGTCACAGACCCGAAC 61.022 63.158 0.00 0.00 0.00 3.95
389 390 2.338620 CAGCGTCACAGACCCGAA 59.661 61.111 0.00 0.00 0.00 4.30
390 391 4.357947 GCAGCGTCACAGACCCGA 62.358 66.667 0.00 0.00 0.00 5.14
392 393 3.612247 ATGGCAGCGTCACAGACCC 62.612 63.158 0.00 0.00 0.00 4.46
393 394 2.046892 ATGGCAGCGTCACAGACC 60.047 61.111 0.00 0.00 0.00 3.85
394 395 1.669115 ACATGGCAGCGTCACAGAC 60.669 57.895 0.00 0.00 0.00 3.51
395 396 1.668793 CACATGGCAGCGTCACAGA 60.669 57.895 0.00 0.00 0.00 3.41
396 397 2.683859 CCACATGGCAGCGTCACAG 61.684 63.158 0.00 0.00 0.00 3.66
397 398 2.669229 CCACATGGCAGCGTCACA 60.669 61.111 0.00 0.00 0.00 3.58
416 417 7.443259 GCCATAGCCCGACTTTATAAATAAA 57.557 36.000 0.00 0.00 0.00 1.40
433 434 5.391312 TTTTTCTGAGAAAAGGCCATAGC 57.609 39.130 18.50 0.00 38.76 2.97
454 455 7.209471 TGTCCATAGCGACTAAAATGTTTTT 57.791 32.000 0.00 0.00 33.70 1.94
455 456 6.128007 CCTGTCCATAGCGACTAAAATGTTTT 60.128 38.462 0.00 0.00 33.70 2.43
456 457 5.354234 CCTGTCCATAGCGACTAAAATGTTT 59.646 40.000 0.00 0.00 33.70 2.83
457 458 4.876107 CCTGTCCATAGCGACTAAAATGTT 59.124 41.667 0.00 0.00 33.70 2.71
458 459 4.081087 ACCTGTCCATAGCGACTAAAATGT 60.081 41.667 0.00 0.00 33.70 2.71
459 460 4.271049 CACCTGTCCATAGCGACTAAAATG 59.729 45.833 0.00 0.00 33.70 2.32
460 461 4.161565 TCACCTGTCCATAGCGACTAAAAT 59.838 41.667 0.00 0.00 33.70 1.82
461 462 3.512329 TCACCTGTCCATAGCGACTAAAA 59.488 43.478 0.00 0.00 33.70 1.52
462 463 3.093814 TCACCTGTCCATAGCGACTAAA 58.906 45.455 0.00 0.00 33.70 1.85
463 464 2.730382 TCACCTGTCCATAGCGACTAA 58.270 47.619 0.00 0.00 33.70 2.24
464 465 2.430248 TCACCTGTCCATAGCGACTA 57.570 50.000 0.00 0.00 33.70 2.59
465 466 1.557099 TTCACCTGTCCATAGCGACT 58.443 50.000 0.00 0.00 33.70 4.18
466 467 2.000447 GTTTCACCTGTCCATAGCGAC 59.000 52.381 0.00 0.00 0.00 5.19
467 468 1.066430 GGTTTCACCTGTCCATAGCGA 60.066 52.381 0.00 0.00 34.73 4.93
468 469 1.369625 GGTTTCACCTGTCCATAGCG 58.630 55.000 0.00 0.00 34.73 4.26
479 480 1.264288 CGCAAGTCAGAAGGTTTCACC 59.736 52.381 0.00 0.00 38.99 4.02
480 481 1.334149 GCGCAAGTCAGAAGGTTTCAC 60.334 52.381 0.30 0.00 41.68 3.18
481 482 0.944386 GCGCAAGTCAGAAGGTTTCA 59.056 50.000 0.30 0.00 41.68 2.69
482 483 0.110644 CGCGCAAGTCAGAAGGTTTC 60.111 55.000 8.75 0.00 41.68 2.78
483 484 0.531974 TCGCGCAAGTCAGAAGGTTT 60.532 50.000 8.75 0.00 41.68 3.27
484 485 0.320771 ATCGCGCAAGTCAGAAGGTT 60.321 50.000 8.75 0.00 41.68 3.50
485 486 1.016130 CATCGCGCAAGTCAGAAGGT 61.016 55.000 8.75 0.00 41.68 3.50
486 487 1.016130 ACATCGCGCAAGTCAGAAGG 61.016 55.000 8.75 0.00 41.68 3.46
524 526 2.798009 GCGCGCTCTCTCTCTCTT 59.202 61.111 26.67 0.00 0.00 2.85
525 527 3.572539 CGCGCGCTCTCTCTCTCT 61.573 66.667 30.48 0.00 0.00 3.10
585 593 1.559149 GCGAACGTTCCGCCTAACAA 61.559 55.000 24.79 0.00 46.22 2.83
587 595 2.774126 GCGAACGTTCCGCCTAAC 59.226 61.111 24.79 2.30 46.22 2.34
605 613 7.123547 CCCAATAACCATGGAAAAAGCTAACTA 59.876 37.037 21.47 0.00 40.56 2.24
617 625 0.626382 TTCCGCCCAATAACCATGGA 59.374 50.000 21.47 0.00 40.56 3.41
619 627 3.305335 GCTATTTCCGCCCAATAACCATG 60.305 47.826 0.00 0.00 0.00 3.66
621 629 2.092103 AGCTATTTCCGCCCAATAACCA 60.092 45.455 0.00 0.00 0.00 3.67
689 698 2.347490 GCCTGGAGCTGTCGGAAA 59.653 61.111 0.00 0.00 38.99 3.13
690 699 3.706373 GGCCTGGAGCTGTCGGAA 61.706 66.667 0.00 0.00 43.05 4.30
766 785 1.745489 GATTGGCTTTCGGCTCGGT 60.745 57.895 0.00 0.00 41.46 4.69
782 801 4.158786 ACGGAGAGATCCTTCATGATGAT 58.841 43.478 10.07 8.80 0.00 2.45
783 802 3.570540 ACGGAGAGATCCTTCATGATGA 58.429 45.455 10.07 4.18 0.00 2.92
784 803 3.305950 GGACGGAGAGATCCTTCATGATG 60.306 52.174 0.00 0.00 30.51 3.07
823 842 4.158394 ACGTCGTTTTTATGCCTAGTAGGA 59.842 41.667 21.02 5.63 37.67 2.94
832 2538 3.594885 CGGTTAACACGTCGTTTTTATGC 59.405 43.478 8.10 0.00 39.14 3.14
857 2563 6.530120 TGTAAGATGGAGAAAGCAAACAGTA 58.470 36.000 0.00 0.00 0.00 2.74
865 2571 5.346181 AGTACCTGTAAGATGGAGAAAGC 57.654 43.478 0.00 0.00 34.07 3.51
944 2650 1.606606 CGAATTTGAAGCTTGGACGC 58.393 50.000 2.10 0.00 0.00 5.19
1098 2815 1.359818 GGGTATAGGCTAGAGCTCCCT 59.640 57.143 16.85 12.59 41.70 4.20
1155 2872 3.855853 GGAGAAGAGAGCGGGGCC 61.856 72.222 0.00 0.00 0.00 5.80
1261 2984 4.493747 CGTCCTCGTCCGCCTTCC 62.494 72.222 0.00 0.00 0.00 3.46
1314 3037 3.348236 GACATGATCCATGGCCGC 58.652 61.111 6.96 0.00 43.53 6.53
1346 3069 3.052186 AGTCATAGAGGAAGCCCTTCTCT 60.052 47.826 7.85 10.21 44.53 3.10
1450 3174 1.749063 AGATCAATGACACGGACGCTA 59.251 47.619 0.00 0.00 0.00 4.26
1484 3208 0.459489 TGTTTTCCACAGTTGCAGCC 59.541 50.000 0.00 0.00 0.00 4.85
1679 3403 3.065371 CCACAAGGTTTATCTTCGGATGC 59.935 47.826 0.00 0.00 36.01 3.91
1760 3484 5.543714 TGTACACACACGGACTGAAAATAT 58.456 37.500 0.00 0.00 0.00 1.28
1763 3487 3.248495 TGTACACACACGGACTGAAAA 57.752 42.857 0.00 0.00 0.00 2.29
1765 3489 2.626266 AGATGTACACACACGGACTGAA 59.374 45.455 0.00 0.00 37.54 3.02
1766 3490 2.030274 CAGATGTACACACACGGACTGA 60.030 50.000 0.00 0.00 37.54 3.41
1767 3491 2.328473 CAGATGTACACACACGGACTG 58.672 52.381 0.00 0.00 37.54 3.51
1776 3500 4.908601 AGACCAATTCCAGATGTACACA 57.091 40.909 0.00 0.00 0.00 3.72
1804 3528 1.980232 CAGGGGCATCAGCAAAGCA 60.980 57.895 0.00 0.00 44.61 3.91
1805 3529 2.890371 CAGGGGCATCAGCAAAGC 59.110 61.111 0.00 0.00 44.61 3.51
1806 3530 2.890371 GCAGGGGCATCAGCAAAG 59.110 61.111 0.00 0.00 44.61 2.77
1816 3540 1.001641 AGTGTTGAGATGCAGGGGC 60.002 57.895 0.00 0.00 41.68 5.80
1817 3541 0.037303 ACAGTGTTGAGATGCAGGGG 59.963 55.000 0.00 0.00 0.00 4.79
1818 3542 2.289631 TGTACAGTGTTGAGATGCAGGG 60.290 50.000 0.00 0.00 0.00 4.45
1819 3543 3.044235 TGTACAGTGTTGAGATGCAGG 57.956 47.619 0.00 0.00 0.00 4.85
1820 3544 3.809279 TGTTGTACAGTGTTGAGATGCAG 59.191 43.478 0.00 0.00 0.00 4.41
1821 3545 3.802866 TGTTGTACAGTGTTGAGATGCA 58.197 40.909 0.00 0.00 0.00 3.96
1840 3564 3.667497 TTCTCATTCTGCGTCTCTTGT 57.333 42.857 0.00 0.00 0.00 3.16
1849 3573 5.886960 ATACCACAGTTTTCTCATTCTGC 57.113 39.130 0.00 0.00 0.00 4.26
1854 3578 7.665559 TCTTGCTAAATACCACAGTTTTCTCAT 59.334 33.333 0.00 0.00 0.00 2.90
1856 3580 7.435068 TCTTGCTAAATACCACAGTTTTCTC 57.565 36.000 0.00 0.00 0.00 2.87
1873 3597 4.021981 AGAGCGTATGTATGCATCTTGCTA 60.022 41.667 0.19 0.00 45.31 3.49
1874 3598 3.062763 GAGCGTATGTATGCATCTTGCT 58.937 45.455 0.19 14.21 45.31 3.91
1875 3599 3.062763 AGAGCGTATGTATGCATCTTGC 58.937 45.455 0.19 3.25 45.29 4.01
1877 3601 5.605534 AGAAAGAGCGTATGTATGCATCTT 58.394 37.500 0.19 9.08 40.60 2.40
1889 3650 3.987868 CAGCAACTACAAGAAAGAGCGTA 59.012 43.478 0.00 0.00 0.00 4.42
1893 3654 4.051922 ACGACAGCAACTACAAGAAAGAG 58.948 43.478 0.00 0.00 0.00 2.85
1896 3657 4.684877 TGTACGACAGCAACTACAAGAAA 58.315 39.130 0.00 0.00 0.00 2.52
1899 3660 5.591643 AATTGTACGACAGCAACTACAAG 57.408 39.130 0.00 0.00 33.69 3.16
1904 3665 4.127171 ACTGAAATTGTACGACAGCAACT 58.873 39.130 0.00 0.00 32.67 3.16
1909 3670 5.234329 ACAACAGACTGAAATTGTACGACAG 59.766 40.000 10.08 0.00 33.59 3.51
1913 3674 7.600039 CAAAAACAACAGACTGAAATTGTACG 58.400 34.615 10.08 0.00 34.24 3.67
1921 3682 5.592282 TCATAGGCAAAAACAACAGACTGAA 59.408 36.000 10.08 0.00 0.00 3.02
1935 3696 4.793071 CGTTTGTGTGAATCATAGGCAAA 58.207 39.130 0.00 0.00 0.00 3.68
1947 3708 0.880278 GAGAGGCAGCGTTTGTGTGA 60.880 55.000 0.00 0.00 0.00 3.58
1948 3709 1.571460 GAGAGGCAGCGTTTGTGTG 59.429 57.895 0.00 0.00 0.00 3.82
1949 3710 1.598130 GGAGAGGCAGCGTTTGTGT 60.598 57.895 0.00 0.00 0.00 3.72
1950 3711 1.294659 GAGGAGAGGCAGCGTTTGTG 61.295 60.000 0.00 0.00 0.00 3.33
1951 3712 1.004440 GAGGAGAGGCAGCGTTTGT 60.004 57.895 0.00 0.00 0.00 2.83
1952 3713 0.739112 GAGAGGAGAGGCAGCGTTTG 60.739 60.000 0.00 0.00 0.00 2.93
1953 3714 0.902516 AGAGAGGAGAGGCAGCGTTT 60.903 55.000 0.00 0.00 0.00 3.60
1954 3715 1.304879 AGAGAGGAGAGGCAGCGTT 60.305 57.895 0.00 0.00 0.00 4.84
1955 3716 1.752694 GAGAGAGGAGAGGCAGCGT 60.753 63.158 0.00 0.00 0.00 5.07
1956 3717 1.447317 GAGAGAGAGGAGAGGCAGCG 61.447 65.000 0.00 0.00 0.00 5.18
1957 3718 1.109323 GGAGAGAGAGGAGAGGCAGC 61.109 65.000 0.00 0.00 0.00 5.25
1958 3719 0.258484 TGGAGAGAGAGGAGAGGCAG 59.742 60.000 0.00 0.00 0.00 4.85
1959 3720 0.932955 ATGGAGAGAGAGGAGAGGCA 59.067 55.000 0.00 0.00 0.00 4.75
1960 3721 2.086610 AATGGAGAGAGAGGAGAGGC 57.913 55.000 0.00 0.00 0.00 4.70
1962 3723 3.068590 GCAGAAATGGAGAGAGAGGAGAG 59.931 52.174 0.00 0.00 0.00 3.20
1963 3724 3.030291 GCAGAAATGGAGAGAGAGGAGA 58.970 50.000 0.00 0.00 0.00 3.71
1964 3725 2.765135 TGCAGAAATGGAGAGAGAGGAG 59.235 50.000 0.00 0.00 0.00 3.69
1965 3726 2.825223 TGCAGAAATGGAGAGAGAGGA 58.175 47.619 0.00 0.00 0.00 3.71
1966 3727 3.134262 TGATGCAGAAATGGAGAGAGAGG 59.866 47.826 0.00 0.00 0.00 3.69
1992 3789 3.440173 TCATCGGGACTGCATTTTTCTTC 59.560 43.478 0.00 0.00 0.00 2.87
2092 3889 5.675538 AGTAGCTCACTGTATTGGAAATCC 58.324 41.667 0.00 0.00 35.62 3.01
2275 4072 4.401925 GCTGTGCCAGGATTATAGGAAAT 58.598 43.478 0.00 0.00 31.21 2.17
2386 4183 2.125552 CGGAATGGCGACTCTGCA 60.126 61.111 0.00 0.00 36.28 4.41
2518 4315 1.204704 GCTTGGGATTTTTCCTTCGGG 59.795 52.381 0.00 0.00 0.00 5.14
2546 4343 0.687920 TGTTCATGTACTTCGGGCCA 59.312 50.000 4.39 0.00 0.00 5.36
2551 4348 2.412870 TGCCACTGTTCATGTACTTCG 58.587 47.619 4.01 0.00 0.00 3.79
2659 4456 2.164422 GCTCGAAAGCCCAAATAAAGCT 59.836 45.455 0.00 0.00 43.10 3.74
2678 4475 0.391597 TTTCTCACCCGAAACTCGCT 59.608 50.000 0.00 0.00 38.82 4.93
2705 4503 2.109799 CATACGGGCCAGGCTCAG 59.890 66.667 13.26 6.88 0.00 3.35
2719 4517 0.174845 CGAACCTGAAGCCCGACATA 59.825 55.000 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.