Multiple sequence alignment - TraesCS6B01G203200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G203200 chr6B 100.000 3152 0 0 1 3152 248510532 248507381 0.000000e+00 5821.0
1 TraesCS6B01G203200 chr6B 100.000 3103 0 0 3437 6539 248507096 248503994 0.000000e+00 5731.0
2 TraesCS6B01G203200 chr6B 88.664 494 35 13 1 473 249385278 249384785 3.400000e-162 582.0
3 TraesCS6B01G203200 chr6B 94.398 357 20 0 1 357 249448117 249447761 3.450000e-152 549.0
4 TraesCS6B01G203200 chr6B 83.144 617 72 18 1041 1645 248390377 248389781 9.650000e-148 534.0
5 TraesCS6B01G203200 chr6B 91.696 289 21 3 4517 4802 248373745 248373457 1.320000e-106 398.0
6 TraesCS6B01G203200 chr6B 85.042 361 43 5 1233 1591 248387135 248386784 2.240000e-94 357.0
7 TraesCS6B01G203200 chr6B 80.317 315 35 15 4514 4802 248389145 248388832 5.140000e-51 213.0
8 TraesCS6B01G203200 chr6B 84.906 159 23 1 5237 5394 248372909 248372751 6.790000e-35 159.0
9 TraesCS6B01G203200 chr6B 93.137 102 7 0 543 644 289915338 289915237 4.080000e-32 150.0
10 TraesCS6B01G203200 chr6B 77.872 235 28 14 6310 6530 361613709 361613485 2.480000e-24 124.0
11 TraesCS6B01G203200 chr6B 90.909 88 8 0 386 473 249444092 249444005 1.150000e-22 119.0
12 TraesCS6B01G203200 chr6B 97.297 37 1 0 5951 5987 594367080 594367116 5.470000e-06 63.9
13 TraesCS6B01G203200 chr6B 97.297 37 1 0 4333 4369 686811984 686811948 5.470000e-06 63.9
14 TraesCS6B01G203200 chr6A 90.499 2126 144 24 721 2821 187975322 187973230 0.000000e+00 2754.0
15 TraesCS6B01G203200 chr6A 90.286 1678 146 12 4869 6539 187969605 187967938 0.000000e+00 2180.0
16 TraesCS6B01G203200 chr6A 93.551 1163 71 3 3721 4879 187972727 187971565 0.000000e+00 1729.0
17 TraesCS6B01G203200 chr6A 97.613 377 9 0 4 380 187999935 187999559 0.000000e+00 647.0
18 TraesCS6B01G203200 chr6A 82.545 613 73 22 1041 1639 187912376 187911784 5.850000e-140 508.0
19 TraesCS6B01G203200 chr6A 91.696 289 21 3 4517 4802 187905513 187905225 1.320000e-106 398.0
20 TraesCS6B01G203200 chr6A 82.271 361 38 15 1233 1591 187909307 187908971 8.300000e-74 289.0
21 TraesCS6B01G203200 chr6A 86.486 222 19 4 3440 3660 187973224 187973013 3.940000e-57 233.0
22 TraesCS6B01G203200 chr6A 81.270 315 32 15 4514 4802 187911137 187910824 5.100000e-56 230.0
23 TraesCS6B01G203200 chr6A 84.277 159 24 1 5237 5394 187904670 187904512 3.160000e-33 154.0
24 TraesCS6B01G203200 chr6A 84.043 94 12 3 4965 5056 187905078 187904986 3.250000e-13 87.9
25 TraesCS6B01G203200 chr6D 94.085 1268 70 5 4414 5678 142923249 142921984 0.000000e+00 1921.0
26 TraesCS6B01G203200 chr6D 91.417 1235 64 21 716 1946 142926288 142925092 0.000000e+00 1655.0
27 TraesCS6B01G203200 chr6D 90.326 889 63 5 1950 2821 142925029 142924147 0.000000e+00 1144.0
28 TraesCS6B01G203200 chr6D 88.960 942 58 18 3440 4379 142924141 142923244 0.000000e+00 1122.0
29 TraesCS6B01G203200 chr6D 86.306 628 72 9 5725 6347 142908438 142907820 0.000000e+00 671.0
30 TraesCS6B01G203200 chr6D 97.158 387 11 0 1 387 142988798 142988412 0.000000e+00 654.0
31 TraesCS6B01G203200 chr6D 81.892 613 73 21 1041 1639 142868774 142868186 3.550000e-132 483.0
32 TraesCS6B01G203200 chr6D 87.042 355 36 4 1238 1591 142858090 142857745 6.150000e-105 392.0
33 TraesCS6B01G203200 chr6D 89.965 289 26 3 4517 4802 142847942 142847654 2.880000e-98 370.0
34 TraesCS6B01G203200 chr6D 86.425 221 24 2 5910 6128 148173565 148173781 3.050000e-58 237.0
35 TraesCS6B01G203200 chr6D 81.270 315 32 13 4514 4802 142867544 142867231 5.100000e-56 230.0
36 TraesCS6B01G203200 chr6D 85.535 159 22 1 5237 5394 142847106 142846948 1.460000e-36 165.0
37 TraesCS6B01G203200 chr6D 82.979 94 13 3 4965 5056 142847507 142847415 1.510000e-11 82.4
38 TraesCS6B01G203200 chr4D 96.053 380 15 0 1 380 7704559 7704938 2.590000e-173 619.0
39 TraesCS6B01G203200 chr4D 78.738 301 44 13 6248 6539 466044499 466044788 4.030000e-42 183.0
40 TraesCS6B01G203200 chr4D 77.778 297 51 10 6248 6539 325527049 325527335 1.130000e-37 169.0
41 TraesCS6B01G203200 chr4D 81.429 140 18 6 6404 6539 145277699 145277564 2.490000e-19 108.0
42 TraesCS6B01G203200 chr5B 95.575 339 12 3 2815 3151 60873781 60874118 2.070000e-149 540.0
43 TraesCS6B01G203200 chr5B 93.567 342 19 3 2810 3151 288886210 288886548 2.100000e-139 507.0
44 TraesCS6B01G203200 chr5B 77.632 304 55 11 6243 6539 330735149 330734852 8.720000e-39 172.0
45 TraesCS6B01G203200 chr5B 94.118 102 6 0 543 644 225884365 225884264 8.780000e-34 156.0
46 TraesCS6B01G203200 chr5B 93.137 102 7 0 543 644 510555853 510555752 4.080000e-32 150.0
47 TraesCS6B01G203200 chr5B 83.158 95 12 4 6253 6346 189545038 189545129 4.200000e-12 84.2
48 TraesCS6B01G203200 chr7B 94.675 338 18 0 2815 3152 714778551 714778888 5.810000e-145 525.0
49 TraesCS6B01G203200 chr7B 95.399 326 15 0 2826 3151 743632759 743633084 2.700000e-143 520.0
50 TraesCS6B01G203200 chr7B 79.468 263 39 12 6247 6502 215390201 215389947 8.720000e-39 172.0
51 TraesCS6B01G203200 chr2B 94.595 333 18 0 2820 3152 701248979 701249311 3.500000e-142 516.0
52 TraesCS6B01G203200 chr2B 94.065 337 20 0 2815 3151 3974373 3974709 4.520000e-141 512.0
53 TraesCS6B01G203200 chr2B 94.059 101 6 0 543 643 688836058 688836158 3.160000e-33 154.0
54 TraesCS6B01G203200 chr2B 81.313 198 27 8 5908 6101 235168060 235167869 1.140000e-32 152.0
55 TraesCS6B01G203200 chr2B 94.792 96 5 0 543 638 385003847 385003942 4.080000e-32 150.0
56 TraesCS6B01G203200 chr2B 93.137 102 7 0 543 644 578134197 578134096 4.080000e-32 150.0
57 TraesCS6B01G203200 chr2B 79.710 138 22 4 4134 4270 56034229 56034361 1.940000e-15 95.3
58 TraesCS6B01G203200 chrUn 94.065 337 20 0 2815 3151 16548869 16548533 4.520000e-141 512.0
59 TraesCS6B01G203200 chrUn 94.048 336 20 0 2815 3150 203046947 203046612 1.630000e-140 510.0
60 TraesCS6B01G203200 chr1B 94.065 337 19 1 2815 3151 507954534 507954199 1.630000e-140 510.0
61 TraesCS6B01G203200 chr3D 78.593 327 49 15 6223 6539 47532313 47532628 5.170000e-46 196.0
62 TraesCS6B01G203200 chr3D 85.714 140 20 0 5908 6047 62693568 62693429 1.470000e-31 148.0
63 TraesCS6B01G203200 chr3D 89.381 113 12 0 543 655 510313222 510313110 6.830000e-30 143.0
64 TraesCS6B01G203200 chr3D 82.883 111 13 5 5999 6108 379533573 379533678 1.940000e-15 95.3
65 TraesCS6B01G203200 chr3D 93.182 44 2 1 4335 4378 591609342 591609384 5.470000e-06 63.9
66 TraesCS6B01G203200 chr4B 77.741 301 45 15 6248 6539 583586026 583586313 1.460000e-36 165.0
67 TraesCS6B01G203200 chr4B 94.118 102 6 0 543 644 345977367 345977266 8.780000e-34 156.0
68 TraesCS6B01G203200 chr4B 79.518 166 25 7 6376 6533 355136348 355136512 6.930000e-20 110.0
69 TraesCS6B01G203200 chr3A 93.269 104 7 0 543 646 750382027 750382130 3.160000e-33 154.0
70 TraesCS6B01G203200 chr3A 100.000 32 0 0 4338 4369 722498229 722498198 7.080000e-05 60.2
71 TraesCS6B01G203200 chr7A 80.263 152 27 3 4097 4247 507168650 507168799 1.930000e-20 111.0
72 TraesCS6B01G203200 chr5D 79.699 133 25 2 6223 6353 302264680 302264812 1.940000e-15 95.3
73 TraesCS6B01G203200 chr4A 78.472 144 26 5 6191 6331 556339695 556339554 9.030000e-14 89.8
74 TraesCS6B01G203200 chr4A 90.566 53 1 2 5956 6008 275957055 275957103 4.230000e-07 67.6
75 TraesCS6B01G203200 chr3B 78.151 119 20 3 5914 6031 623631357 623631470 3.270000e-08 71.3
76 TraesCS6B01G203200 chr5A 90.566 53 1 2 5956 6008 199646736 199646688 4.230000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G203200 chr6B 248503994 248510532 6538 True 5776.000000 5821 100.000000 1 6539 2 chr6B.!!$R7 6538
1 TraesCS6B01G203200 chr6B 248386784 248390377 3593 True 368.000000 534 82.834333 1041 4802 3 chr6B.!!$R6 3761
2 TraesCS6B01G203200 chr6B 249444005 249448117 4112 True 334.000000 549 92.653500 1 473 2 chr6B.!!$R8 472
3 TraesCS6B01G203200 chr6B 248372751 248373745 994 True 278.500000 398 88.301000 4517 5394 2 chr6B.!!$R5 877
4 TraesCS6B01G203200 chr6A 187967938 187975322 7384 True 1724.000000 2754 90.205500 721 6539 4 chr6A.!!$R3 5818
5 TraesCS6B01G203200 chr6A 187904512 187912376 7864 True 277.816667 508 84.350333 1041 5394 6 chr6A.!!$R2 4353
6 TraesCS6B01G203200 chr6D 142921984 142926288 4304 True 1460.500000 1921 91.197000 716 5678 4 chr6D.!!$R6 4962
7 TraesCS6B01G203200 chr6D 142907820 142908438 618 True 671.000000 671 86.306000 5725 6347 1 chr6D.!!$R2 622
8 TraesCS6B01G203200 chr6D 142867231 142868774 1543 True 356.500000 483 81.581000 1041 4802 2 chr6D.!!$R5 3761
9 TraesCS6B01G203200 chr6D 142846948 142847942 994 True 205.800000 370 86.159667 4517 5394 3 chr6D.!!$R4 877

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
983 4624 0.038159 CGCTATCCGTCCTCCCAATC 60.038 60.0 0.00 0.0 0.00 2.67 F
984 4625 0.038159 GCTATCCGTCCTCCCAATCG 60.038 60.0 0.00 0.0 0.00 3.34 F
986 4627 0.105862 TATCCGTCCTCCCAATCGGT 60.106 55.0 0.00 0.0 42.95 4.69 F
1561 5209 0.250727 TTCTCCGACCAAAGCCAAGG 60.251 55.0 0.00 0.0 0.00 3.61 F
1648 5305 0.669625 GGTTGGCGAGTAGTGACACC 60.670 60.0 0.84 0.0 0.00 4.16 F
2705 6610 0.687354 ACCAACCGACATCTGCTTCT 59.313 50.0 0.00 0.0 0.00 2.85 F
3636 7541 0.179004 GGCGGATGGAGAGAGAGAGA 60.179 60.0 0.00 0.0 0.00 3.10 F
4035 8183 0.309302 TTTTCACATCCACGGTTGCG 59.691 50.0 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2587 6492 0.034574 TTATTGCGCATGGGGTCAGT 60.035 50.000 12.75 1.62 0.00 3.41 R
2694 6599 0.250513 GTCGGGGAAGAAGCAGATGT 59.749 55.000 0.00 0.00 0.00 3.06 R
2718 6623 0.394938 TTTGCTCTAGCGTGGTTCCA 59.605 50.000 0.00 0.00 45.83 3.53 R
3437 7342 0.032416 GGGTCTAGGTCCCAGTGCTA 60.032 60.000 15.77 0.00 44.05 3.49 R
3492 7397 0.329596 AAGGGAAGCTAGGCCACAAG 59.670 55.000 5.01 0.00 0.00 3.16 R
3704 7609 0.752054 TGCTTTGCTCTTTGTTGGGG 59.248 50.000 0.00 0.00 0.00 4.96 R
5094 16875 2.162681 GTTAGCTGATGCCAACCACTT 58.837 47.619 0.00 0.00 40.80 3.16 R
5941 18247 1.003718 GTTCCTGTTGCTACCGCCT 60.004 57.895 0.00 0.00 34.43 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 3.112709 GCTCGTGAACTCGTGGGC 61.113 66.667 0.00 0.00 0.00 5.36
110 111 2.550180 GTTTCTGCCAGAGAGGTTTGAC 59.450 50.000 0.00 0.00 40.61 3.18
111 112 0.687354 TCTGCCAGAGAGGTTTGACC 59.313 55.000 0.00 0.00 40.61 4.02
117 118 0.980423 AGAGAGGTTTGACCAGGAGC 59.020 55.000 0.00 0.00 41.95 4.70
149 150 1.376037 GAGGGACTTCAAGGGCACG 60.376 63.158 0.00 0.00 41.55 5.34
179 180 1.227263 CATACCGTTCGGAGCAGGG 60.227 63.158 18.28 0.00 0.00 4.45
209 210 2.666207 CCCGGGATGACGTTTGGA 59.334 61.111 18.48 0.00 0.00 3.53
257 258 1.862806 GCTGCTGTTCCACTTCGAC 59.137 57.895 0.00 0.00 0.00 4.20
272 273 4.025858 GACCTGGAGCTGCCTGCA 62.026 66.667 1.53 0.00 45.94 4.41
332 333 3.461773 ATCACCACGCGGAGGAGG 61.462 66.667 24.06 15.66 35.59 4.30
366 367 2.904866 TGGCCACCACGCTTGTTC 60.905 61.111 0.00 0.00 0.00 3.18
367 368 3.670377 GGCCACCACGCTTGTTCC 61.670 66.667 0.00 0.00 0.00 3.62
368 369 2.594592 GCCACCACGCTTGTTCCT 60.595 61.111 0.00 0.00 0.00 3.36
369 370 2.908073 GCCACCACGCTTGTTCCTG 61.908 63.158 0.00 0.00 0.00 3.86
371 372 0.250124 CCACCACGCTTGTTCCTGTA 60.250 55.000 0.00 0.00 0.00 2.74
373 374 0.250166 ACCACGCTTGTTCCTGTACC 60.250 55.000 0.00 0.00 0.00 3.34
375 376 1.148310 CACGCTTGTTCCTGTACCAG 58.852 55.000 0.00 0.00 0.00 4.00
376 377 1.045407 ACGCTTGTTCCTGTACCAGA 58.955 50.000 0.00 0.00 32.44 3.86
377 378 1.000955 ACGCTTGTTCCTGTACCAGAG 59.999 52.381 0.00 0.00 32.44 3.35
378 379 1.000955 CGCTTGTTCCTGTACCAGAGT 59.999 52.381 0.00 0.00 32.44 3.24
380 381 3.673594 CGCTTGTTCCTGTACCAGAGTAG 60.674 52.174 0.00 0.00 32.44 2.57
381 382 3.510360 GCTTGTTCCTGTACCAGAGTAGA 59.490 47.826 0.00 0.00 32.44 2.59
382 383 4.160626 GCTTGTTCCTGTACCAGAGTAGAT 59.839 45.833 0.00 0.00 32.44 1.98
383 384 5.655488 CTTGTTCCTGTACCAGAGTAGATG 58.345 45.833 0.00 0.00 32.44 2.90
384 385 4.673968 TGTTCCTGTACCAGAGTAGATGT 58.326 43.478 0.00 0.00 32.44 3.06
385 386 4.705507 TGTTCCTGTACCAGAGTAGATGTC 59.294 45.833 0.00 0.00 32.44 3.06
386 387 4.586306 TCCTGTACCAGAGTAGATGTCA 57.414 45.455 0.00 0.00 32.44 3.58
387 388 4.930696 TCCTGTACCAGAGTAGATGTCAA 58.069 43.478 0.00 0.00 32.44 3.18
388 389 5.519808 TCCTGTACCAGAGTAGATGTCAAT 58.480 41.667 0.00 0.00 32.44 2.57
389 390 6.669631 TCCTGTACCAGAGTAGATGTCAATA 58.330 40.000 0.00 0.00 32.44 1.90
390 391 7.123383 TCCTGTACCAGAGTAGATGTCAATAA 58.877 38.462 0.00 0.00 32.44 1.40
391 392 7.068348 TCCTGTACCAGAGTAGATGTCAATAAC 59.932 40.741 0.00 0.00 32.44 1.89
394 395 8.758829 TGTACCAGAGTAGATGTCAATAACAAT 58.241 33.333 0.00 0.00 42.37 2.71
395 396 9.035607 GTACCAGAGTAGATGTCAATAACAATG 57.964 37.037 0.00 0.00 42.37 2.82
408 4049 9.513906 TGTCAATAACAATGATAAACAAGGAGA 57.486 29.630 0.00 0.00 34.03 3.71
409 4050 9.994432 GTCAATAACAATGATAAACAAGGAGAG 57.006 33.333 0.00 0.00 0.00 3.20
411 4052 8.680903 CAATAACAATGATAAACAAGGAGAGCT 58.319 33.333 0.00 0.00 0.00 4.09
473 4114 6.209391 AGCAATGCTACATCCACTTAAAGTTT 59.791 34.615 5.69 0.00 36.99 2.66
474 4115 6.868339 GCAATGCTACATCCACTTAAAGTTTT 59.132 34.615 0.00 0.00 0.00 2.43
475 4116 7.384932 GCAATGCTACATCCACTTAAAGTTTTT 59.615 33.333 0.00 0.00 0.00 1.94
512 4153 8.559536 TCATATACTTAAAGTTACGTCTACGGG 58.440 37.037 7.50 0.00 44.95 5.28
513 4154 4.440839 ACTTAAAGTTACGTCTACGGGG 57.559 45.455 7.50 0.00 44.95 5.73
514 4155 4.079253 ACTTAAAGTTACGTCTACGGGGA 58.921 43.478 7.50 0.00 44.95 4.81
515 4156 4.706962 ACTTAAAGTTACGTCTACGGGGAT 59.293 41.667 7.50 0.00 44.95 3.85
516 4157 5.185828 ACTTAAAGTTACGTCTACGGGGATT 59.814 40.000 7.50 0.00 44.95 3.01
517 4158 3.515330 AAGTTACGTCTACGGGGATTG 57.485 47.619 7.50 0.00 44.95 2.67
518 4159 2.450476 AGTTACGTCTACGGGGATTGT 58.550 47.619 7.50 0.00 44.95 2.71
519 4160 2.424956 AGTTACGTCTACGGGGATTGTC 59.575 50.000 7.50 0.00 44.95 3.18
520 4161 1.392589 TACGTCTACGGGGATTGTCC 58.607 55.000 7.50 0.00 44.95 4.02
526 4167 2.437716 CGGGGATTGTCCGGTTGG 60.438 66.667 0.00 0.00 43.45 3.77
527 4168 2.754254 GGGGATTGTCCGGTTGGC 60.754 66.667 0.00 0.00 37.43 4.52
528 4169 3.131478 GGGATTGTCCGGTTGGCG 61.131 66.667 0.00 0.00 37.43 5.69
529 4170 2.359478 GGATTGTCCGGTTGGCGT 60.359 61.111 0.00 0.00 34.14 5.68
530 4171 1.969589 GGATTGTCCGGTTGGCGTT 60.970 57.895 0.00 0.00 34.14 4.84
531 4172 1.520600 GGATTGTCCGGTTGGCGTTT 61.521 55.000 0.00 0.00 34.14 3.60
532 4173 0.312729 GATTGTCCGGTTGGCGTTTT 59.687 50.000 0.00 0.00 34.14 2.43
533 4174 0.747852 ATTGTCCGGTTGGCGTTTTT 59.252 45.000 0.00 0.00 34.14 1.94
534 4175 0.100861 TTGTCCGGTTGGCGTTTTTC 59.899 50.000 0.00 0.00 34.14 2.29
535 4176 1.008194 GTCCGGTTGGCGTTTTTCC 60.008 57.895 0.00 0.00 34.14 3.13
536 4177 1.453379 TCCGGTTGGCGTTTTTCCA 60.453 52.632 0.00 0.00 34.14 3.53
537 4178 0.824182 TCCGGTTGGCGTTTTTCCAT 60.824 50.000 0.00 0.00 32.92 3.41
538 4179 0.665972 CCGGTTGGCGTTTTTCCATG 60.666 55.000 0.00 0.00 32.92 3.66
539 4180 0.665972 CGGTTGGCGTTTTTCCATGG 60.666 55.000 4.97 4.97 32.92 3.66
540 4181 0.320334 GGTTGGCGTTTTTCCATGGG 60.320 55.000 13.02 0.00 32.92 4.00
541 4182 0.948623 GTTGGCGTTTTTCCATGGGC 60.949 55.000 13.02 5.83 32.92 5.36
542 4183 1.402896 TTGGCGTTTTTCCATGGGCA 61.403 50.000 13.02 0.00 32.92 5.36
543 4184 1.374125 GGCGTTTTTCCATGGGCAC 60.374 57.895 13.02 2.77 0.00 5.01
556 4197 2.282391 GGCACCCATGTCAGCACA 60.282 61.111 0.00 0.00 36.78 4.57
557 4198 2.629656 GGCACCCATGTCAGCACAC 61.630 63.158 0.00 0.00 34.48 3.82
558 4199 1.898094 GCACCCATGTCAGCACACA 60.898 57.895 0.00 0.00 34.48 3.72
559 4200 1.859427 GCACCCATGTCAGCACACAG 61.859 60.000 0.00 0.00 34.48 3.66
560 4201 1.073722 ACCCATGTCAGCACACAGG 59.926 57.895 0.00 0.00 34.48 4.00
561 4202 2.338015 CCCATGTCAGCACACAGGC 61.338 63.158 0.00 0.00 34.48 4.85
562 4203 1.601477 CCATGTCAGCACACAGGCA 60.601 57.895 0.00 0.00 34.48 4.75
563 4204 0.963856 CCATGTCAGCACACAGGCAT 60.964 55.000 0.00 0.00 34.48 4.40
564 4205 0.450583 CATGTCAGCACACAGGCATC 59.549 55.000 0.00 0.00 34.48 3.91
565 4206 0.327259 ATGTCAGCACACAGGCATCT 59.673 50.000 0.00 0.00 34.48 2.90
566 4207 0.109153 TGTCAGCACACAGGCATCTT 59.891 50.000 0.00 0.00 35.83 2.40
567 4208 1.347378 TGTCAGCACACAGGCATCTTA 59.653 47.619 0.00 0.00 35.83 2.10
568 4209 2.026915 TGTCAGCACACAGGCATCTTAT 60.027 45.455 0.00 0.00 35.83 1.73
569 4210 3.197549 TGTCAGCACACAGGCATCTTATA 59.802 43.478 0.00 0.00 35.83 0.98
570 4211 3.806521 GTCAGCACACAGGCATCTTATAG 59.193 47.826 0.00 0.00 35.83 1.31
571 4212 2.547211 CAGCACACAGGCATCTTATAGC 59.453 50.000 0.00 0.00 35.83 2.97
572 4213 2.171237 AGCACACAGGCATCTTATAGCA 59.829 45.455 0.00 0.00 35.83 3.49
573 4214 3.144506 GCACACAGGCATCTTATAGCAT 58.855 45.455 0.00 0.00 0.00 3.79
574 4215 3.188048 GCACACAGGCATCTTATAGCATC 59.812 47.826 0.00 0.00 0.00 3.91
575 4216 4.383173 CACACAGGCATCTTATAGCATCA 58.617 43.478 0.00 0.00 0.00 3.07
576 4217 5.001874 CACACAGGCATCTTATAGCATCAT 58.998 41.667 0.00 0.00 0.00 2.45
577 4218 6.168389 CACACAGGCATCTTATAGCATCATA 58.832 40.000 0.00 0.00 0.00 2.15
578 4219 6.822170 CACACAGGCATCTTATAGCATCATAT 59.178 38.462 0.00 0.00 0.00 1.78
579 4220 7.336176 CACACAGGCATCTTATAGCATCATATT 59.664 37.037 0.00 0.00 0.00 1.28
580 4221 7.551974 ACACAGGCATCTTATAGCATCATATTC 59.448 37.037 0.00 0.00 0.00 1.75
581 4222 7.551617 CACAGGCATCTTATAGCATCATATTCA 59.448 37.037 0.00 0.00 0.00 2.57
582 4223 8.105197 ACAGGCATCTTATAGCATCATATTCAA 58.895 33.333 0.00 0.00 0.00 2.69
583 4224 9.121658 CAGGCATCTTATAGCATCATATTCAAT 57.878 33.333 0.00 0.00 0.00 2.57
584 4225 9.121658 AGGCATCTTATAGCATCATATTCAATG 57.878 33.333 0.00 0.00 0.00 2.82
585 4226 8.350722 GGCATCTTATAGCATCATATTCAATGG 58.649 37.037 0.00 0.00 0.00 3.16
586 4227 7.861372 GCATCTTATAGCATCATATTCAATGGC 59.139 37.037 0.00 0.00 0.00 4.40
587 4228 9.121658 CATCTTATAGCATCATATTCAATGGCT 57.878 33.333 0.00 0.00 0.00 4.75
595 4236 9.524496 AGCATCATATTCAATGGCTATAAAAGA 57.476 29.630 0.00 0.00 0.00 2.52
604 4245 9.631257 TTCAATGGCTATAAAAGATGAATGAGA 57.369 29.630 0.00 0.00 0.00 3.27
605 4246 9.060347 TCAATGGCTATAAAAGATGAATGAGAC 57.940 33.333 0.00 0.00 0.00 3.36
606 4247 7.992754 ATGGCTATAAAAGATGAATGAGACC 57.007 36.000 0.00 0.00 0.00 3.85
607 4248 6.299141 TGGCTATAAAAGATGAATGAGACCC 58.701 40.000 0.00 0.00 0.00 4.46
608 4249 6.126507 TGGCTATAAAAGATGAATGAGACCCA 60.127 38.462 0.00 0.00 0.00 4.51
609 4250 6.772716 GGCTATAAAAGATGAATGAGACCCAA 59.227 38.462 0.00 0.00 0.00 4.12
610 4251 7.449704 GGCTATAAAAGATGAATGAGACCCAAT 59.550 37.037 0.00 0.00 0.00 3.16
611 4252 8.854117 GCTATAAAAGATGAATGAGACCCAATT 58.146 33.333 0.00 0.00 0.00 2.32
618 4259 9.956640 AAGATGAATGAGACCCAATTATATCTC 57.043 33.333 5.47 5.47 38.46 2.75
625 4266 8.956446 TGAGACCCAATTATATCTCATGTAGA 57.044 34.615 9.51 0.00 41.99 2.59
626 4267 9.552695 TGAGACCCAATTATATCTCATGTAGAT 57.447 33.333 9.51 10.99 46.95 1.98
627 4268 9.814899 GAGACCCAATTATATCTCATGTAGATG 57.185 37.037 14.33 0.00 44.95 2.90
628 4269 9.552695 AGACCCAATTATATCTCATGTAGATGA 57.447 33.333 14.33 2.15 44.95 2.92
656 4297 9.912634 TTCTAGCAGAACTGGAAAATTAAAATG 57.087 29.630 3.99 0.00 42.34 2.32
657 4298 9.295825 TCTAGCAGAACTGGAAAATTAAAATGA 57.704 29.630 3.99 0.00 32.07 2.57
669 4310 9.394477 GGAAAATTAAAATGATATACCTCGTGC 57.606 33.333 0.00 0.00 0.00 5.34
670 4311 9.103048 GAAAATTAAAATGATATACCTCGTGCG 57.897 33.333 0.00 0.00 0.00 5.34
671 4312 7.724305 AATTAAAATGATATACCTCGTGCGT 57.276 32.000 0.00 0.00 0.00 5.24
672 4313 7.724305 ATTAAAATGATATACCTCGTGCGTT 57.276 32.000 0.00 0.00 0.00 4.84
673 4314 8.821147 ATTAAAATGATATACCTCGTGCGTTA 57.179 30.769 0.00 0.00 0.00 3.18
674 4315 6.520792 AAAATGATATACCTCGTGCGTTAC 57.479 37.500 0.00 0.00 0.00 2.50
675 4316 5.449107 AATGATATACCTCGTGCGTTACT 57.551 39.130 0.00 0.00 0.00 2.24
676 4317 6.564709 AATGATATACCTCGTGCGTTACTA 57.435 37.500 0.00 0.00 0.00 1.82
677 4318 5.348418 TGATATACCTCGTGCGTTACTAC 57.652 43.478 0.00 0.00 0.00 2.73
687 4328 3.446507 CGTTACTACGGGCATTGGT 57.553 52.632 0.00 0.00 43.94 3.67
688 4329 1.729284 CGTTACTACGGGCATTGGTT 58.271 50.000 0.00 0.00 43.94 3.67
689 4330 1.395608 CGTTACTACGGGCATTGGTTG 59.604 52.381 0.00 0.00 43.94 3.77
690 4331 4.373777 CGTTACTACGGGCATTGGTTGC 62.374 54.545 0.00 0.00 43.96 4.17
707 4348 9.806203 CATTGGTTGCAATAATATTTTGAGAGA 57.194 29.630 0.59 0.00 0.00 3.10
851 4492 8.863086 CCATATGAACATACCAAAGGAATGAAT 58.137 33.333 3.65 0.00 0.00 2.57
870 4511 2.388310 TGTATGGTCGCATTTCCGAA 57.612 45.000 0.00 0.00 39.17 4.30
881 4522 2.487762 GCATTTCCGAAAGATGGACACA 59.512 45.455 0.00 0.00 34.56 3.72
889 4530 1.227999 AAGATGGACACAACCGCACG 61.228 55.000 0.00 0.00 0.00 5.34
915 4556 1.828979 TATTTTGCCGGGGACTGTTC 58.171 50.000 2.18 0.00 0.00 3.18
930 4571 4.210746 GGACTGTTCGGACAAACTAGAAAC 59.789 45.833 0.00 0.00 34.85 2.78
932 4573 4.809426 ACTGTTCGGACAAACTAGAAACTG 59.191 41.667 0.00 0.00 34.85 3.16
933 4574 5.013568 TGTTCGGACAAACTAGAAACTGA 57.986 39.130 0.00 0.00 31.49 3.41
934 4575 5.047847 TGTTCGGACAAACTAGAAACTGAG 58.952 41.667 0.00 0.00 31.49 3.35
935 4576 5.163488 TGTTCGGACAAACTAGAAACTGAGA 60.163 40.000 0.00 0.00 31.49 3.27
936 4577 5.723672 TCGGACAAACTAGAAACTGAGAT 57.276 39.130 0.00 0.00 0.00 2.75
937 4578 5.710984 TCGGACAAACTAGAAACTGAGATC 58.289 41.667 0.00 0.00 0.00 2.75
938 4579 4.559251 CGGACAAACTAGAAACTGAGATCG 59.441 45.833 0.00 0.00 0.00 3.69
951 4592 1.079503 GAGATCGTGTGGTTTCAGCC 58.920 55.000 0.00 0.00 0.00 4.85
962 4603 1.600636 TTTCAGCCACCGCCTCTTG 60.601 57.895 0.00 0.00 34.57 3.02
963 4604 3.551496 TTCAGCCACCGCCTCTTGG 62.551 63.158 0.00 0.00 34.57 3.61
973 4614 2.815308 CCTCTTGGCGCTATCCGT 59.185 61.111 7.64 0.00 39.71 4.69
974 4615 1.300233 CCTCTTGGCGCTATCCGTC 60.300 63.158 7.64 0.00 43.18 4.79
975 4616 1.300233 CTCTTGGCGCTATCCGTCC 60.300 63.158 7.64 0.00 41.91 4.79
976 4617 1.739338 CTCTTGGCGCTATCCGTCCT 61.739 60.000 7.64 0.00 41.91 3.85
977 4618 1.300233 CTTGGCGCTATCCGTCCTC 60.300 63.158 7.64 0.00 41.91 3.71
978 4619 2.701163 CTTGGCGCTATCCGTCCTCC 62.701 65.000 7.64 0.00 41.91 4.30
979 4620 3.992317 GGCGCTATCCGTCCTCCC 61.992 72.222 7.64 0.00 39.71 4.30
980 4621 3.224324 GCGCTATCCGTCCTCCCA 61.224 66.667 0.00 0.00 39.71 4.37
981 4622 2.792947 GCGCTATCCGTCCTCCCAA 61.793 63.158 0.00 0.00 39.71 4.12
982 4623 2.050269 CGCTATCCGTCCTCCCAAT 58.950 57.895 0.00 0.00 0.00 3.16
983 4624 0.038159 CGCTATCCGTCCTCCCAATC 60.038 60.000 0.00 0.00 0.00 2.67
984 4625 0.038159 GCTATCCGTCCTCCCAATCG 60.038 60.000 0.00 0.00 0.00 3.34
985 4626 0.603569 CTATCCGTCCTCCCAATCGG 59.396 60.000 0.00 0.00 43.65 4.18
986 4627 0.105862 TATCCGTCCTCCCAATCGGT 60.106 55.000 0.00 0.00 42.95 4.69
1030 4671 2.293856 ACTCCCCAGGATCCACATACTT 60.294 50.000 15.82 0.00 0.00 2.24
1039 4680 4.225942 AGGATCCACATACTTCAGAGCAAA 59.774 41.667 15.82 0.00 0.00 3.68
1447 5088 1.024579 GCCACATAGGAACCCACGTG 61.025 60.000 9.08 9.08 41.22 4.49
1561 5209 0.250727 TTCTCCGACCAAAGCCAAGG 60.251 55.000 0.00 0.00 0.00 3.61
1648 5305 0.669625 GGTTGGCGAGTAGTGACACC 60.670 60.000 0.84 0.00 0.00 4.16
1694 5455 7.665471 CGATTGCATTATGTTCGAAAAACAAT 58.335 30.769 0.00 5.99 33.42 2.71
1697 5458 5.119898 TGCATTATGTTCGAAAAACAATGGC 59.880 36.000 19.69 14.69 33.42 4.40
1698 5459 5.348451 GCATTATGTTCGAAAAACAATGGCT 59.652 36.000 19.69 0.00 33.42 4.75
1700 5461 7.062839 GCATTATGTTCGAAAAACAATGGCTTA 59.937 33.333 19.69 0.44 33.42 3.09
1703 5464 9.562583 TTATGTTCGAAAAACAATGGCTTATAC 57.437 29.630 0.00 0.00 33.42 1.47
1770 5581 2.317530 GGACAGGTCCTGCATTACTC 57.682 55.000 19.40 7.54 46.16 2.59
1893 5713 8.499162 CACCATGCTAGCAAACTTCTTATATAC 58.501 37.037 23.54 0.00 0.00 1.47
1942 5790 9.678941 TGACACGAAAATATGAGATATCAGTAC 57.321 33.333 5.32 0.00 0.00 2.73
1996 5877 9.727627 GGTTTATCAGAATCATGATCTGTTTTC 57.272 33.333 23.09 13.02 43.77 2.29
2045 5926 2.812011 AGTTTACAATGCTTGGGACGAC 59.188 45.455 0.00 0.00 34.12 4.34
2057 5938 1.597027 GGACGACCACACCAACAGG 60.597 63.158 0.00 0.00 35.97 4.00
2103 5984 8.612145 AGGGAAAACATAAACTCAACTATAGGT 58.388 33.333 4.43 0.00 0.00 3.08
2135 6016 1.686052 GGTTGCCATCTGAAAACACCA 59.314 47.619 0.00 0.00 0.00 4.17
2171 6052 2.496470 GGAGAGTCATACCGAACCAAGT 59.504 50.000 0.00 0.00 0.00 3.16
2213 6094 6.707599 AACTTGCTAAACTAACTAGCTTCG 57.292 37.500 0.00 0.00 41.96 3.79
2254 6148 2.917933 CCTCCAAAATCACATCGGCTA 58.082 47.619 0.00 0.00 0.00 3.93
2301 6202 1.455217 TAGTAGTCCCTCCGGCTGC 60.455 63.158 0.00 0.00 0.00 5.25
2401 6306 3.470888 CTCGGAGTTGCCCCGGAT 61.471 66.667 0.73 0.00 46.47 4.18
2449 6354 3.650647 TTCAAGAATGAAGCGGCCT 57.349 47.368 0.00 0.00 40.59 5.19
2452 6357 1.831106 TCAAGAATGAAGCGGCCTCTA 59.169 47.619 0.00 0.00 30.99 2.43
2512 6417 2.279741 GATGTGATTCACTTGGCGCTA 58.720 47.619 17.26 0.00 35.11 4.26
2548 6453 2.573915 CCCCTAGGCTTTGAAAGAGTCT 59.426 50.000 9.48 5.27 32.96 3.24
2574 6479 2.675423 CACCACTGCTGCTGCCAT 60.675 61.111 13.47 0.00 38.71 4.40
2587 6492 2.270850 GCCATAGGCCCGTGAACA 59.729 61.111 0.00 0.00 44.06 3.18
2607 6512 1.102154 CTGACCCCATGCGCAATAAA 58.898 50.000 17.11 0.00 0.00 1.40
2618 6523 5.335897 CCATGCGCAATAAATAGCCATAGTT 60.336 40.000 17.11 0.00 0.00 2.24
2646 6551 2.075355 AACAAGATGCCGGGACCCAA 62.075 55.000 12.15 0.00 0.00 4.12
2652 6557 1.948403 ATGCCGGGACCCAAATCCAT 61.948 55.000 12.15 2.11 40.96 3.41
2694 6599 2.280524 CCTCGCAACACCAACCGA 60.281 61.111 0.00 0.00 0.00 4.69
2705 6610 0.687354 ACCAACCGACATCTGCTTCT 59.313 50.000 0.00 0.00 0.00 2.85
2718 6623 1.002544 CTGCTTCTTCCCCGACTTTCT 59.997 52.381 0.00 0.00 0.00 2.52
2743 6648 0.955428 CACGCTAGAGCAAAGCCCAA 60.955 55.000 1.89 0.00 42.21 4.12
2777 6682 1.879380 GAATATGCATGGCAACCGCTA 59.121 47.619 10.16 0.00 43.62 4.26
2811 6716 3.418913 CGTTCGCCATCGCAACCA 61.419 61.111 0.00 0.00 35.26 3.67
2812 6717 2.749865 CGTTCGCCATCGCAACCAT 61.750 57.895 0.00 0.00 35.26 3.55
2821 6726 4.209911 CGCCATCGCAACCATCATATATAG 59.790 45.833 0.00 0.00 34.03 1.31
2822 6727 4.512944 GCCATCGCAACCATCATATATAGG 59.487 45.833 0.00 0.00 34.03 2.57
2823 6728 5.684813 GCCATCGCAACCATCATATATAGGA 60.685 44.000 0.00 0.00 34.03 2.94
2824 6729 5.755375 CCATCGCAACCATCATATATAGGAC 59.245 44.000 0.00 0.00 0.00 3.85
2825 6730 5.993748 TCGCAACCATCATATATAGGACA 57.006 39.130 0.00 0.00 0.00 4.02
2826 6731 6.353404 TCGCAACCATCATATATAGGACAA 57.647 37.500 0.00 0.00 0.00 3.18
2827 6732 6.764379 TCGCAACCATCATATATAGGACAAA 58.236 36.000 0.00 0.00 0.00 2.83
2828 6733 7.394016 TCGCAACCATCATATATAGGACAAAT 58.606 34.615 0.00 0.00 0.00 2.32
2829 6734 7.882791 TCGCAACCATCATATATAGGACAAATT 59.117 33.333 0.00 0.00 0.00 1.82
2830 6735 8.514594 CGCAACCATCATATATAGGACAAATTT 58.485 33.333 0.00 0.00 0.00 1.82
2842 6747 9.774413 ATATAGGACAAATTTTTCCTACTACCG 57.226 33.333 27.61 0.00 45.37 4.02
2843 6748 5.250982 AGGACAAATTTTTCCTACTACCGG 58.749 41.667 21.79 0.00 40.70 5.28
2844 6749 4.397103 GGACAAATTTTTCCTACTACCGGG 59.603 45.833 14.90 0.00 0.00 5.73
2845 6750 4.989277 ACAAATTTTTCCTACTACCGGGT 58.011 39.130 6.32 4.46 0.00 5.28
2846 6751 4.763279 ACAAATTTTTCCTACTACCGGGTG 59.237 41.667 10.66 0.00 0.00 4.61
2847 6752 4.645863 AATTTTTCCTACTACCGGGTGT 57.354 40.909 10.66 6.62 0.00 4.16
2848 6753 5.760484 AATTTTTCCTACTACCGGGTGTA 57.240 39.130 10.66 7.54 0.00 2.90
2874 6779 8.631797 AGTTACACCCATTTTTATTTTGTACGT 58.368 29.630 0.00 0.00 0.00 3.57
2875 6780 9.247126 GTTACACCCATTTTTATTTTGTACGTT 57.753 29.630 0.00 0.00 0.00 3.99
2876 6781 9.813446 TTACACCCATTTTTATTTTGTACGTTT 57.187 25.926 0.00 0.00 0.00 3.60
2877 6782 8.719560 ACACCCATTTTTATTTTGTACGTTTT 57.280 26.923 0.00 0.00 0.00 2.43
2878 6783 9.813446 ACACCCATTTTTATTTTGTACGTTTTA 57.187 25.926 0.00 0.00 0.00 1.52
2897 6802 8.292448 ACGTTTTATGTAGTATCTACCATACCG 58.708 37.037 4.77 0.00 0.00 4.02
2898 6803 7.752239 CGTTTTATGTAGTATCTACCATACCGG 59.248 40.741 0.00 0.00 42.50 5.28
2899 6804 8.796475 GTTTTATGTAGTATCTACCATACCGGA 58.204 37.037 9.46 0.00 38.63 5.14
2900 6805 8.571461 TTTATGTAGTATCTACCATACCGGAG 57.429 38.462 9.46 0.00 38.63 4.63
2901 6806 5.573380 TGTAGTATCTACCATACCGGAGT 57.427 43.478 9.46 1.99 38.63 3.85
2902 6807 5.311265 TGTAGTATCTACCATACCGGAGTG 58.689 45.833 9.46 6.11 38.63 3.51
2903 6808 4.450305 AGTATCTACCATACCGGAGTGT 57.550 45.455 9.46 1.75 38.63 3.55
2904 6809 5.573380 AGTATCTACCATACCGGAGTGTA 57.427 43.478 9.46 2.99 38.63 2.90
2905 6810 6.137104 AGTATCTACCATACCGGAGTGTAT 57.863 41.667 9.46 0.00 38.63 2.29
2906 6811 5.944599 AGTATCTACCATACCGGAGTGTATG 59.055 44.000 9.46 5.54 44.95 2.39
2907 6812 4.174704 TCTACCATACCGGAGTGTATGT 57.825 45.455 9.46 2.63 44.24 2.29
2908 6813 5.308976 TCTACCATACCGGAGTGTATGTA 57.691 43.478 9.46 3.67 44.24 2.29
2909 6814 5.884322 TCTACCATACCGGAGTGTATGTAT 58.116 41.667 9.46 0.00 44.24 2.29
2910 6815 4.866508 ACCATACCGGAGTGTATGTATG 57.133 45.455 9.46 2.64 44.24 2.39
2911 6816 3.006537 ACCATACCGGAGTGTATGTATGC 59.993 47.826 9.46 0.00 44.24 3.14
2912 6817 3.585862 CATACCGGAGTGTATGTATGCC 58.414 50.000 9.46 0.00 41.95 4.40
2913 6818 1.789523 ACCGGAGTGTATGTATGCCT 58.210 50.000 9.46 0.00 0.00 4.75
2914 6819 2.953453 ACCGGAGTGTATGTATGCCTA 58.047 47.619 9.46 0.00 0.00 3.93
2915 6820 2.891580 ACCGGAGTGTATGTATGCCTAG 59.108 50.000 9.46 0.00 0.00 3.02
2916 6821 2.891580 CCGGAGTGTATGTATGCCTAGT 59.108 50.000 0.00 0.00 0.00 2.57
2917 6822 4.077108 CCGGAGTGTATGTATGCCTAGTA 58.923 47.826 0.00 0.00 0.00 1.82
2918 6823 4.705507 CCGGAGTGTATGTATGCCTAGTAT 59.294 45.833 0.00 0.00 0.00 2.12
2919 6824 5.393135 CCGGAGTGTATGTATGCCTAGTATG 60.393 48.000 0.00 0.00 0.00 2.39
2920 6825 5.183331 CGGAGTGTATGTATGCCTAGTATGT 59.817 44.000 0.00 0.00 0.00 2.29
2921 6826 6.373495 CGGAGTGTATGTATGCCTAGTATGTA 59.627 42.308 0.00 0.00 0.00 2.29
2922 6827 7.414208 CGGAGTGTATGTATGCCTAGTATGTAG 60.414 44.444 0.00 0.00 0.00 2.74
2923 6828 7.393796 GGAGTGTATGTATGCCTAGTATGTAGT 59.606 40.741 0.00 0.00 0.00 2.73
2924 6829 9.445878 GAGTGTATGTATGCCTAGTATGTAGTA 57.554 37.037 0.00 0.00 0.00 1.82
2925 6830 9.976776 AGTGTATGTATGCCTAGTATGTAGTAT 57.023 33.333 0.00 0.00 0.00 2.12
2927 6832 9.749340 TGTATGTATGCCTAGTATGTAGTATGT 57.251 33.333 0.00 0.00 0.00 2.29
3052 6957 6.135290 TGATAAAAACATAGGCTCACATGC 57.865 37.500 0.00 0.00 0.00 4.06
3053 6958 5.651576 TGATAAAAACATAGGCTCACATGCA 59.348 36.000 0.00 0.00 34.04 3.96
3054 6959 4.870123 AAAAACATAGGCTCACATGCAA 57.130 36.364 0.00 0.00 34.04 4.08
3055 6960 5.410355 AAAAACATAGGCTCACATGCAAT 57.590 34.783 0.00 0.00 34.04 3.56
3056 6961 5.410355 AAAACATAGGCTCACATGCAATT 57.590 34.783 0.00 0.00 34.04 2.32
3057 6962 5.410355 AAACATAGGCTCACATGCAATTT 57.590 34.783 0.00 0.00 34.04 1.82
3058 6963 5.410355 AACATAGGCTCACATGCAATTTT 57.590 34.783 0.00 0.00 34.04 1.82
3059 6964 5.410355 ACATAGGCTCACATGCAATTTTT 57.590 34.783 0.00 0.00 34.04 1.94
3078 6983 5.759506 TTTTTCACATAACTCGCTTTGGA 57.240 34.783 0.00 0.00 0.00 3.53
3079 6984 5.356882 TTTTCACATAACTCGCTTTGGAG 57.643 39.130 0.00 0.00 39.97 3.86
3081 6986 4.794278 TCACATAACTCGCTTTGGAGTA 57.206 40.909 0.00 0.00 46.21 2.59
3082 6987 5.339008 TCACATAACTCGCTTTGGAGTAT 57.661 39.130 0.00 0.00 46.21 2.12
3083 6988 5.348986 TCACATAACTCGCTTTGGAGTATC 58.651 41.667 0.00 0.00 46.21 2.24
3084 6989 5.105513 TCACATAACTCGCTTTGGAGTATCA 60.106 40.000 0.00 0.00 46.21 2.15
3085 6990 5.005779 CACATAACTCGCTTTGGAGTATCAC 59.994 44.000 0.00 0.00 46.21 3.06
3086 6991 3.678056 AACTCGCTTTGGAGTATCACA 57.322 42.857 0.00 0.00 46.21 3.58
3087 6992 3.238108 ACTCGCTTTGGAGTATCACAG 57.762 47.619 0.00 0.00 45.14 3.66
3088 6993 2.826128 ACTCGCTTTGGAGTATCACAGA 59.174 45.455 0.00 0.00 45.14 3.41
3089 6994 3.449018 ACTCGCTTTGGAGTATCACAGAT 59.551 43.478 0.00 0.00 45.14 2.90
3090 6995 4.645136 ACTCGCTTTGGAGTATCACAGATA 59.355 41.667 0.00 0.00 45.14 1.98
3091 6996 5.303078 ACTCGCTTTGGAGTATCACAGATAT 59.697 40.000 0.00 0.00 45.14 1.63
3092 6997 6.490381 ACTCGCTTTGGAGTATCACAGATATA 59.510 38.462 0.00 0.00 45.14 0.86
3093 6998 6.914259 TCGCTTTGGAGTATCACAGATATAG 58.086 40.000 0.00 0.00 36.25 1.31
3094 6999 6.490381 TCGCTTTGGAGTATCACAGATATAGT 59.510 38.462 0.00 0.00 36.25 2.12
3095 7000 7.664318 TCGCTTTGGAGTATCACAGATATAGTA 59.336 37.037 0.00 0.00 36.25 1.82
3096 7001 8.462811 CGCTTTGGAGTATCACAGATATAGTAT 58.537 37.037 0.00 0.00 36.25 2.12
3462 7367 0.865362 TGGGACCTAGACCCCCTATC 59.135 60.000 18.04 0.00 46.21 2.08
3483 7388 2.045926 CAAGCCGCCTTGTAGCCT 60.046 61.111 0.00 0.00 42.76 4.58
3485 7390 2.895424 AAGCCGCCTTGTAGCCTGT 61.895 57.895 0.00 0.00 0.00 4.00
3486 7391 2.359975 GCCGCCTTGTAGCCTGTT 60.360 61.111 0.00 0.00 0.00 3.16
3487 7392 2.690778 GCCGCCTTGTAGCCTGTTG 61.691 63.158 0.00 0.00 0.00 3.33
3488 7393 1.302511 CCGCCTTGTAGCCTGTTGT 60.303 57.895 0.00 0.00 0.00 3.32
3489 7394 1.577328 CCGCCTTGTAGCCTGTTGTG 61.577 60.000 0.00 0.00 0.00 3.33
3490 7395 1.577328 CGCCTTGTAGCCTGTTGTGG 61.577 60.000 0.00 0.00 0.00 4.17
3491 7396 1.244019 GCCTTGTAGCCTGTTGTGGG 61.244 60.000 0.00 0.00 0.00 4.61
3515 7420 1.153349 GGCCTAGCTTCCCTTGTCG 60.153 63.158 0.00 0.00 0.00 4.35
3545 7450 1.333636 AAGAGCCTCCACCAGATCCG 61.334 60.000 0.00 0.00 0.00 4.18
3603 7508 1.440893 CGCTACTGCTGCCTCATCT 59.559 57.895 0.00 0.00 36.97 2.90
3619 7524 2.955022 ATCTGGATGCGGCAAGAGGC 62.955 60.000 6.82 0.00 43.74 4.70
3630 7535 1.680522 GCAAGAGGCGGATGGAGAGA 61.681 60.000 0.00 0.00 0.00 3.10
3636 7541 0.179004 GGCGGATGGAGAGAGAGAGA 60.179 60.000 0.00 0.00 0.00 3.10
3637 7542 1.238439 GCGGATGGAGAGAGAGAGAG 58.762 60.000 0.00 0.00 0.00 3.20
3638 7543 1.202758 GCGGATGGAGAGAGAGAGAGA 60.203 57.143 0.00 0.00 0.00 3.10
3639 7544 2.771089 CGGATGGAGAGAGAGAGAGAG 58.229 57.143 0.00 0.00 0.00 3.20
3640 7545 2.368548 CGGATGGAGAGAGAGAGAGAGA 59.631 54.545 0.00 0.00 0.00 3.10
3641 7546 3.555795 CGGATGGAGAGAGAGAGAGAGAG 60.556 56.522 0.00 0.00 0.00 3.20
3642 7547 3.648067 GGATGGAGAGAGAGAGAGAGAGA 59.352 52.174 0.00 0.00 0.00 3.10
3669 7574 2.022035 AGAGAGAGAGAGAGAGGAGGGA 60.022 54.545 0.00 0.00 0.00 4.20
3696 7601 0.685097 GCAGTGGGTAGACTTGGACA 59.315 55.000 0.00 0.00 0.00 4.02
3700 7605 1.988817 GGGTAGACTTGGACACCCC 59.011 63.158 0.00 0.00 44.20 4.95
3704 7609 4.717313 GACTTGGACACCCCGCCC 62.717 72.222 0.00 0.00 37.93 6.13
3723 7869 0.752054 CCCCAACAAAGAGCAAAGCA 59.248 50.000 0.00 0.00 0.00 3.91
3787 7933 5.712004 TGTTTGATATGAACCATTGCACAG 58.288 37.500 0.00 0.00 0.00 3.66
3802 7948 7.928706 ACCATTGCACAGTAAGATTACTAGATC 59.071 37.037 4.98 0.00 41.82 2.75
4035 8183 0.309302 TTTTCACATCCACGGTTGCG 59.691 50.000 0.00 0.00 0.00 4.85
4056 8204 1.069091 TGTTGATGTGACATTGCTGCG 60.069 47.619 0.00 0.00 0.00 5.18
4077 8225 8.070171 GCTGCGTGTTGAGATAAATATGTTAAT 58.930 33.333 0.00 0.00 0.00 1.40
4130 8279 8.437360 TGATACCTTGCATGTTAGTATGAAAG 57.563 34.615 0.00 0.00 41.48 2.62
4277 8426 2.049077 TTTCAACGCATGTGCATGTC 57.951 45.000 6.08 5.56 42.21 3.06
4298 8447 2.164219 CGTGGTGAATCTTTTCCCATGG 59.836 50.000 4.14 4.14 36.52 3.66
4310 8459 1.985473 TCCCATGGATGTTAGCATGC 58.015 50.000 15.22 10.51 42.76 4.06
4318 8467 2.300433 GATGTTAGCATGCCATGGTGA 58.700 47.619 19.13 8.50 41.73 4.02
4331 8480 3.823304 GCCATGGTGACTCTTTTCTCTTT 59.177 43.478 14.67 0.00 0.00 2.52
4444 8593 7.378181 TCTCCATTTGCCTTTTCAATAGAAAC 58.622 34.615 0.00 0.00 43.09 2.78
4566 8715 6.494059 AGCAATGGAATCCCTAAATATACCC 58.506 40.000 0.00 0.00 0.00 3.69
4610 8759 4.356405 TCAGGACATTGAACACAGACAT 57.644 40.909 0.00 0.00 0.00 3.06
4748 14547 2.995258 TGAGTTACGTTGGATTTACGGC 59.005 45.455 0.00 0.00 42.99 5.68
4825 14624 9.474313 AGTGGCTTCTTTTTGGAATTACATATA 57.526 29.630 0.00 0.00 0.00 0.86
5013 16793 0.871057 TTGCATCGTTTGATCACGCA 59.129 45.000 0.00 0.00 40.14 5.24
5073 16854 4.164988 AGATGTTAGCATGCTTCCCTTACT 59.835 41.667 28.02 13.57 35.07 2.24
5094 16875 6.431198 ACTCGAGTGCAAAAAGAAGTAAAA 57.569 33.333 19.30 0.00 0.00 1.52
5178 16963 6.519213 GCCCTATTTCCCTAATCTACTGACAG 60.519 46.154 0.00 0.00 0.00 3.51
5212 17185 6.205464 TCTCAATGAACTTACTTTGCAAGAGG 59.795 38.462 0.00 0.00 0.00 3.69
5319 17293 2.289002 ACGTCGAGACCGGATTATACAC 59.711 50.000 9.46 0.00 36.24 2.90
5409 17411 1.266178 TCACATCTTCTCGAAGGCCA 58.734 50.000 5.01 0.00 38.88 5.36
5422 17424 2.738643 CGAAGGCCACAATCTATCGTGT 60.739 50.000 5.01 0.00 0.00 4.49
5426 17428 2.418746 GGCCACAATCTATCGTGTCTGT 60.419 50.000 0.00 0.00 0.00 3.41
5460 17462 9.778741 ACATATACACTCCACCTATGTAATTTG 57.221 33.333 0.00 0.00 32.70 2.32
5622 17927 8.848474 AGTTGCATGTCTAAACTTACATTACT 57.152 30.769 0.00 0.00 34.12 2.24
5834 18140 9.152595 GAAATAAGTAACTAGGAGTTGACTTGG 57.847 37.037 16.20 0.00 39.11 3.61
5864 18170 7.676683 TCTTACTACAGATAGCAAGGGAAAT 57.323 36.000 0.00 0.00 33.92 2.17
5919 18225 0.830023 ATTTGAACCAACCCCCACCG 60.830 55.000 0.00 0.00 0.00 4.94
5941 18247 2.682494 GGGTGGGGAGTACGAGCA 60.682 66.667 0.00 0.00 0.00 4.26
6032 18338 2.602322 GGGCTCGATCGATGCAAGC 61.602 63.158 28.28 22.84 0.00 4.01
6055 18361 4.501229 CCTCGACTCCATCTACTACGTACT 60.501 50.000 0.00 0.00 0.00 2.73
6057 18363 4.118410 CGACTCCATCTACTACGTACTGT 58.882 47.826 0.00 0.00 0.00 3.55
6059 18365 3.626670 ACTCCATCTACTACGTACTGTGC 59.373 47.826 0.00 0.00 0.00 4.57
6061 18367 2.373269 CATCTACTACGTACTGTGCGC 58.627 52.381 18.02 0.00 0.00 6.09
6064 18370 2.582202 TACTACGTACTGTGCGCGCC 62.582 60.000 30.77 20.33 0.00 6.53
6065 18371 3.957027 CTACGTACTGTGCGCGCCA 62.957 63.158 30.77 23.84 0.00 5.69
6135 18441 2.043752 TCATGTCTCGGGCGGGTA 60.044 61.111 0.00 0.00 0.00 3.69
6183 18489 2.124695 GGTAAGCAGCGAAGGGGG 60.125 66.667 0.00 0.00 0.00 5.40
6220 18526 5.116084 TCAGTTATAGCAGCAAAGGGATT 57.884 39.130 0.00 0.00 0.00 3.01
6221 18527 5.509498 TCAGTTATAGCAGCAAAGGGATTT 58.491 37.500 0.00 0.00 0.00 2.17
6238 18544 4.036380 GGGATTTATTGGGTTCAGTTAGCG 59.964 45.833 0.00 0.00 0.00 4.26
6241 18547 0.328258 ATTGGGTTCAGTTAGCGGCT 59.672 50.000 7.98 7.98 0.00 5.52
6245 18551 1.206371 GGGTTCAGTTAGCGGCTAAGA 59.794 52.381 22.00 14.06 0.00 2.10
6246 18552 2.354403 GGGTTCAGTTAGCGGCTAAGAA 60.354 50.000 22.00 18.60 0.00 2.52
6260 18566 2.888594 CTAAGAAATCGCTCGGGTTCA 58.111 47.619 7.98 0.00 0.00 3.18
6266 18572 1.183549 ATCGCTCGGGTTCAGTTAGT 58.816 50.000 0.00 0.00 0.00 2.24
6267 18573 1.825090 TCGCTCGGGTTCAGTTAGTA 58.175 50.000 0.00 0.00 0.00 1.82
6274 18580 2.163010 CGGGTTCAGTTAGTAGCGAAGA 59.837 50.000 0.00 0.00 0.00 2.87
6277 18583 4.388165 GGGTTCAGTTAGTAGCGAAGAAAC 59.612 45.833 0.00 0.00 0.00 2.78
6278 18584 4.986659 GGTTCAGTTAGTAGCGAAGAAACA 59.013 41.667 0.00 0.00 0.00 2.83
6279 18585 5.118817 GGTTCAGTTAGTAGCGAAGAAACAG 59.881 44.000 0.00 0.00 0.00 3.16
6280 18586 5.449107 TCAGTTAGTAGCGAAGAAACAGT 57.551 39.130 0.00 0.00 0.00 3.55
6298 18604 3.068307 ACAGTTCGAGTTCAGTTAGCAGT 59.932 43.478 0.00 0.00 0.00 4.40
6331 18637 3.706698 TCGCTCATGTTCAGTACATAGC 58.293 45.455 0.00 9.57 45.71 2.97
6346 18652 1.541588 CATAGCGGGATCGATCACTCA 59.458 52.381 24.53 10.24 39.00 3.41
6371 18677 5.303333 TGTTCAATACATAGTGCGAGGGATA 59.697 40.000 0.00 0.00 0.00 2.59
6372 18678 5.644977 TCAATACATAGTGCGAGGGATAG 57.355 43.478 0.00 0.00 0.00 2.08
6379 18685 5.247110 ACATAGTGCGAGGGATAGATCAATT 59.753 40.000 0.00 0.00 0.00 2.32
6384 18690 3.332919 CGAGGGATAGATCAATTGCTGG 58.667 50.000 0.00 0.00 0.00 4.85
6409 18716 0.391661 GGAAGTGAATGCCTCGCTCA 60.392 55.000 0.00 0.00 44.39 4.26
6427 18734 3.589988 CTCAGGTTCAGTTAGCGAACAT 58.410 45.455 12.42 0.00 43.70 2.71
6439 18746 2.316867 CGAACATGGCTCGCACACA 61.317 57.895 6.54 0.00 0.00 3.72
6441 18748 2.498761 GAACATGGCTCGCACACACG 62.499 60.000 0.00 0.00 0.00 4.49
6461 18768 1.614385 CGCGTGTACGAGAGAAACAT 58.386 50.000 8.82 0.00 41.67 2.71
6468 18775 3.496884 TGTACGAGAGAAACATGCAAACC 59.503 43.478 0.00 0.00 0.00 3.27
6473 18780 4.393062 CGAGAGAAACATGCAAACCACTAT 59.607 41.667 0.00 0.00 0.00 2.12
6480 18787 3.809832 ACATGCAAACCACTATATCGCTC 59.190 43.478 0.00 0.00 0.00 5.03
6504 18812 1.321805 CGACCACCCACCGTATACCA 61.322 60.000 0.00 0.00 0.00 3.25
6505 18813 0.903942 GACCACCCACCGTATACCAA 59.096 55.000 0.00 0.00 0.00 3.67
6514 18822 2.113807 ACCGTATACCAAGAACTCCCC 58.886 52.381 0.00 0.00 0.00 4.81
6515 18823 1.068127 CCGTATACCAAGAACTCCCCG 59.932 57.143 0.00 0.00 0.00 5.73
6526 18834 4.114015 AGAACTCCCCGAAAAATTCCTT 57.886 40.909 0.00 0.00 0.00 3.36
6530 18838 0.249120 CCCCGAAAAATTCCTTGCCC 59.751 55.000 0.00 0.00 0.00 5.36
6531 18839 1.266178 CCCGAAAAATTCCTTGCCCT 58.734 50.000 0.00 0.00 0.00 5.19
6532 18840 1.204704 CCCGAAAAATTCCTTGCCCTC 59.795 52.381 0.00 0.00 0.00 4.30
6533 18841 1.892474 CCGAAAAATTCCTTGCCCTCA 59.108 47.619 0.00 0.00 0.00 3.86
6534 18842 2.352715 CCGAAAAATTCCTTGCCCTCAC 60.353 50.000 0.00 0.00 0.00 3.51
6535 18843 2.295909 CGAAAAATTCCTTGCCCTCACA 59.704 45.455 0.00 0.00 0.00 3.58
6536 18844 3.056607 CGAAAAATTCCTTGCCCTCACAT 60.057 43.478 0.00 0.00 0.00 3.21
6538 18846 3.463048 AAATTCCTTGCCCTCACATCT 57.537 42.857 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 1.831652 CTGGCAGAAACTCCTCCGGT 61.832 60.000 9.42 0.00 0.00 5.28
95 96 0.322008 CCTGGTCAAACCTCTCTGGC 60.322 60.000 0.00 0.00 39.58 4.85
98 99 0.980423 GCTCCTGGTCAAACCTCTCT 59.020 55.000 0.00 0.00 39.58 3.10
130 131 1.002011 GTGCCCTTGAAGTCCCTCC 60.002 63.158 0.00 0.00 0.00 4.30
149 150 2.935481 ACGGTATGAACTCGAAGTCC 57.065 50.000 0.00 0.00 0.00 3.85
194 195 1.019278 CCAGTCCAAACGTCATCCCG 61.019 60.000 0.00 0.00 0.00 5.14
204 205 2.324330 CGATGTGCGCCAGTCCAAA 61.324 57.895 4.18 0.00 0.00 3.28
209 210 3.997064 GAGCTCGATGTGCGCCAGT 62.997 63.158 4.18 0.00 40.61 4.00
257 258 4.798344 CCTGCAGGCAGCTCCAGG 62.798 72.222 22.33 10.69 45.94 4.45
366 367 7.147897 TGTTATTGACATCTACTCTGGTACAGG 60.148 40.741 0.00 0.00 45.26 4.00
367 368 7.772166 TGTTATTGACATCTACTCTGGTACAG 58.228 38.462 0.00 0.00 46.08 2.74
368 369 7.712204 TGTTATTGACATCTACTCTGGTACA 57.288 36.000 0.00 0.00 32.00 2.90
369 370 9.035607 CATTGTTATTGACATCTACTCTGGTAC 57.964 37.037 0.00 0.00 38.26 3.34
371 372 7.851228 TCATTGTTATTGACATCTACTCTGGT 58.149 34.615 0.00 0.00 38.26 4.00
382 383 9.513906 TCTCCTTGTTTATCATTGTTATTGACA 57.486 29.630 0.00 0.00 36.19 3.58
383 384 9.994432 CTCTCCTTGTTTATCATTGTTATTGAC 57.006 33.333 0.00 0.00 0.00 3.18
384 385 8.677300 GCTCTCCTTGTTTATCATTGTTATTGA 58.323 33.333 0.00 0.00 0.00 2.57
385 386 8.680903 AGCTCTCCTTGTTTATCATTGTTATTG 58.319 33.333 0.00 0.00 0.00 1.90
386 387 8.814038 AGCTCTCCTTGTTTATCATTGTTATT 57.186 30.769 0.00 0.00 0.00 1.40
389 390 9.905713 TTATAGCTCTCCTTGTTTATCATTGTT 57.094 29.630 0.00 0.00 0.00 2.83
442 4083 3.003068 GTGGATGTAGCATTGCTCATGAC 59.997 47.826 15.81 8.38 40.44 3.06
486 4127 8.559536 CCCGTAGACGTAACTTTAAGTATATGA 58.440 37.037 0.00 0.00 31.81 2.15
487 4128 7.805071 CCCCGTAGACGTAACTTTAAGTATATG 59.195 40.741 0.00 2.24 37.74 1.78
488 4129 7.719633 TCCCCGTAGACGTAACTTTAAGTATAT 59.280 37.037 0.00 0.00 37.74 0.86
489 4130 7.051623 TCCCCGTAGACGTAACTTTAAGTATA 58.948 38.462 0.00 0.00 37.74 1.47
490 4131 5.885912 TCCCCGTAGACGTAACTTTAAGTAT 59.114 40.000 0.00 0.00 37.74 2.12
491 4132 5.250200 TCCCCGTAGACGTAACTTTAAGTA 58.750 41.667 0.00 0.00 37.74 2.24
492 4133 4.079253 TCCCCGTAGACGTAACTTTAAGT 58.921 43.478 0.85 0.00 37.74 2.24
493 4134 4.701956 TCCCCGTAGACGTAACTTTAAG 57.298 45.455 0.85 0.00 37.74 1.85
494 4135 5.047377 ACAATCCCCGTAGACGTAACTTTAA 60.047 40.000 0.85 0.00 37.74 1.52
495 4136 4.462483 ACAATCCCCGTAGACGTAACTTTA 59.538 41.667 0.85 0.00 37.74 1.85
496 4137 3.259123 ACAATCCCCGTAGACGTAACTTT 59.741 43.478 0.85 0.00 37.74 2.66
497 4138 2.827921 ACAATCCCCGTAGACGTAACTT 59.172 45.455 0.85 0.00 37.74 2.66
498 4139 2.424956 GACAATCCCCGTAGACGTAACT 59.575 50.000 0.85 0.00 37.74 2.24
499 4140 2.480244 GGACAATCCCCGTAGACGTAAC 60.480 54.545 0.85 0.00 37.74 2.50
500 4141 1.750778 GGACAATCCCCGTAGACGTAA 59.249 52.381 0.85 0.00 37.74 3.18
501 4142 1.392589 GGACAATCCCCGTAGACGTA 58.607 55.000 0.85 0.00 37.74 3.57
502 4143 1.660560 CGGACAATCCCCGTAGACGT 61.661 60.000 0.85 0.00 41.91 4.34
503 4144 1.065273 CGGACAATCCCCGTAGACG 59.935 63.158 0.00 0.00 41.91 4.18
504 4145 1.325476 ACCGGACAATCCCCGTAGAC 61.325 60.000 9.46 0.00 45.14 2.59
505 4146 0.615544 AACCGGACAATCCCCGTAGA 60.616 55.000 9.46 0.00 45.14 2.59
506 4147 0.461339 CAACCGGACAATCCCCGTAG 60.461 60.000 9.46 0.00 45.14 3.51
507 4148 1.597989 CAACCGGACAATCCCCGTA 59.402 57.895 9.46 0.00 45.14 4.02
508 4149 2.349755 CAACCGGACAATCCCCGT 59.650 61.111 9.46 0.00 45.14 5.28
509 4150 2.437716 CCAACCGGACAATCCCCG 60.438 66.667 9.46 0.00 46.10 5.73
510 4151 2.754254 GCCAACCGGACAATCCCC 60.754 66.667 9.46 0.00 31.13 4.81
511 4152 3.131478 CGCCAACCGGACAATCCC 61.131 66.667 9.46 0.00 31.13 3.85
512 4153 1.520600 AAACGCCAACCGGACAATCC 61.521 55.000 9.46 0.00 42.52 3.01
513 4154 0.312729 AAAACGCCAACCGGACAATC 59.687 50.000 9.46 0.00 42.52 2.67
514 4155 0.747852 AAAAACGCCAACCGGACAAT 59.252 45.000 9.46 0.00 42.52 2.71
515 4156 0.100861 GAAAAACGCCAACCGGACAA 59.899 50.000 9.46 0.00 42.52 3.18
516 4157 1.726533 GGAAAAACGCCAACCGGACA 61.727 55.000 9.46 0.00 42.52 4.02
517 4158 1.008194 GGAAAAACGCCAACCGGAC 60.008 57.895 9.46 0.00 42.52 4.79
518 4159 0.824182 ATGGAAAAACGCCAACCGGA 60.824 50.000 9.46 0.00 42.52 5.14
519 4160 0.665972 CATGGAAAAACGCCAACCGG 60.666 55.000 0.00 0.00 42.52 5.28
520 4161 0.665972 CCATGGAAAAACGCCAACCG 60.666 55.000 5.56 0.00 39.21 4.44
521 4162 0.320334 CCCATGGAAAAACGCCAACC 60.320 55.000 15.22 0.00 39.21 3.77
522 4163 0.948623 GCCCATGGAAAAACGCCAAC 60.949 55.000 15.22 0.00 39.21 3.77
523 4164 1.369321 GCCCATGGAAAAACGCCAA 59.631 52.632 15.22 0.00 39.21 4.52
524 4165 1.834378 TGCCCATGGAAAAACGCCA 60.834 52.632 15.22 0.00 40.24 5.69
525 4166 1.374125 GTGCCCATGGAAAAACGCC 60.374 57.895 15.22 0.00 0.00 5.68
526 4167 1.374125 GGTGCCCATGGAAAAACGC 60.374 57.895 15.22 7.45 0.00 4.84
527 4168 1.291906 GGGTGCCCATGGAAAAACG 59.708 57.895 15.22 0.00 35.81 3.60
528 4169 2.446512 TGGGTGCCCATGGAAAAAC 58.553 52.632 15.22 5.43 41.89 2.43
538 4179 3.064324 GTGCTGACATGGGTGCCC 61.064 66.667 0.00 0.00 0.00 5.36
539 4180 2.282391 TGTGCTGACATGGGTGCC 60.282 61.111 0.00 0.00 0.00 5.01
540 4181 1.859427 CTGTGTGCTGACATGGGTGC 61.859 60.000 0.00 0.00 33.63 5.01
541 4182 1.239296 CCTGTGTGCTGACATGGGTG 61.239 60.000 0.00 0.00 33.63 4.61
542 4183 1.073722 CCTGTGTGCTGACATGGGT 59.926 57.895 0.00 0.00 33.63 4.51
543 4184 2.338015 GCCTGTGTGCTGACATGGG 61.338 63.158 0.00 0.00 33.63 4.00
544 4185 0.963856 ATGCCTGTGTGCTGACATGG 60.964 55.000 0.00 0.00 33.63 3.66
545 4186 0.450583 GATGCCTGTGTGCTGACATG 59.549 55.000 0.00 0.00 33.63 3.21
546 4187 0.327259 AGATGCCTGTGTGCTGACAT 59.673 50.000 0.00 0.00 33.63 3.06
547 4188 0.109153 AAGATGCCTGTGTGCTGACA 59.891 50.000 0.00 0.00 0.00 3.58
548 4189 2.099141 TAAGATGCCTGTGTGCTGAC 57.901 50.000 0.00 0.00 0.00 3.51
549 4190 3.742327 GCTATAAGATGCCTGTGTGCTGA 60.742 47.826 0.00 0.00 0.00 4.26
550 4191 2.547211 GCTATAAGATGCCTGTGTGCTG 59.453 50.000 0.00 0.00 0.00 4.41
551 4192 2.171237 TGCTATAAGATGCCTGTGTGCT 59.829 45.455 0.00 0.00 0.00 4.40
552 4193 2.564771 TGCTATAAGATGCCTGTGTGC 58.435 47.619 0.00 0.00 0.00 4.57
553 4194 4.383173 TGATGCTATAAGATGCCTGTGTG 58.617 43.478 0.00 0.00 0.00 3.82
554 4195 4.694760 TGATGCTATAAGATGCCTGTGT 57.305 40.909 0.00 0.00 0.00 3.72
555 4196 7.551617 TGAATATGATGCTATAAGATGCCTGTG 59.448 37.037 0.00 0.00 0.00 3.66
556 4197 7.627311 TGAATATGATGCTATAAGATGCCTGT 58.373 34.615 0.00 0.00 0.00 4.00
557 4198 8.502105 TTGAATATGATGCTATAAGATGCCTG 57.498 34.615 0.00 0.00 0.00 4.85
558 4199 9.121658 CATTGAATATGATGCTATAAGATGCCT 57.878 33.333 0.00 0.00 0.00 4.75
559 4200 8.350722 CCATTGAATATGATGCTATAAGATGCC 58.649 37.037 0.00 0.00 0.00 4.40
560 4201 7.861372 GCCATTGAATATGATGCTATAAGATGC 59.139 37.037 0.00 0.00 0.00 3.91
561 4202 9.121658 AGCCATTGAATATGATGCTATAAGATG 57.878 33.333 0.00 0.00 0.00 2.90
569 4210 9.524496 TCTTTTATAGCCATTGAATATGATGCT 57.476 29.630 0.00 0.00 0.00 3.79
578 4219 9.631257 TCTCATTCATCTTTTATAGCCATTGAA 57.369 29.630 0.00 0.00 0.00 2.69
579 4220 9.060347 GTCTCATTCATCTTTTATAGCCATTGA 57.940 33.333 0.00 0.00 0.00 2.57
580 4221 8.295288 GGTCTCATTCATCTTTTATAGCCATTG 58.705 37.037 0.00 0.00 0.00 2.82
581 4222 7.449704 GGGTCTCATTCATCTTTTATAGCCATT 59.550 37.037 0.00 0.00 0.00 3.16
582 4223 6.944862 GGGTCTCATTCATCTTTTATAGCCAT 59.055 38.462 0.00 0.00 0.00 4.40
583 4224 6.126507 TGGGTCTCATTCATCTTTTATAGCCA 60.127 38.462 0.00 0.00 0.00 4.75
584 4225 6.299141 TGGGTCTCATTCATCTTTTATAGCC 58.701 40.000 0.00 0.00 0.00 3.93
585 4226 7.807977 TTGGGTCTCATTCATCTTTTATAGC 57.192 36.000 0.00 0.00 0.00 2.97
592 4233 9.956640 GAGATATAATTGGGTCTCATTCATCTT 57.043 33.333 9.55 0.00 37.60 2.40
593 4234 9.109246 TGAGATATAATTGGGTCTCATTCATCT 57.891 33.333 11.92 0.00 41.40 2.90
601 4242 9.814899 CATCTACATGAGATATAATTGGGTCTC 57.185 37.037 0.00 8.16 43.52 3.36
602 4243 9.552695 TCATCTACATGAGATATAATTGGGTCT 57.447 33.333 0.00 0.00 43.52 3.85
630 4271 9.912634 CATTTTAATTTTCCAGTTCTGCTAGAA 57.087 29.630 0.00 0.00 0.00 2.10
631 4272 9.295825 TCATTTTAATTTTCCAGTTCTGCTAGA 57.704 29.630 0.00 0.00 0.00 2.43
643 4284 9.394477 GCACGAGGTATATCATTTTAATTTTCC 57.606 33.333 0.00 0.00 0.00 3.13
644 4285 9.103048 CGCACGAGGTATATCATTTTAATTTTC 57.897 33.333 0.00 0.00 0.00 2.29
645 4286 8.617809 ACGCACGAGGTATATCATTTTAATTTT 58.382 29.630 0.00 0.00 0.00 1.82
646 4287 8.149973 ACGCACGAGGTATATCATTTTAATTT 57.850 30.769 0.00 0.00 0.00 1.82
647 4288 7.724305 ACGCACGAGGTATATCATTTTAATT 57.276 32.000 0.00 0.00 0.00 1.40
648 4289 7.724305 AACGCACGAGGTATATCATTTTAAT 57.276 32.000 0.00 0.00 0.00 1.40
649 4290 7.922278 AGTAACGCACGAGGTATATCATTTTAA 59.078 33.333 0.00 0.00 0.00 1.52
650 4291 7.428020 AGTAACGCACGAGGTATATCATTTTA 58.572 34.615 0.00 0.00 0.00 1.52
651 4292 6.278363 AGTAACGCACGAGGTATATCATTTT 58.722 36.000 0.00 0.00 0.00 1.82
652 4293 5.839621 AGTAACGCACGAGGTATATCATTT 58.160 37.500 0.00 0.00 0.00 2.32
653 4294 5.449107 AGTAACGCACGAGGTATATCATT 57.551 39.130 0.00 0.00 0.00 2.57
654 4295 5.390251 CGTAGTAACGCACGAGGTATATCAT 60.390 44.000 0.00 0.00 43.12 2.45
655 4296 4.084380 CGTAGTAACGCACGAGGTATATCA 60.084 45.833 0.00 0.00 43.12 2.15
656 4297 4.389645 CGTAGTAACGCACGAGGTATATC 58.610 47.826 0.00 0.00 43.12 1.63
657 4298 4.395581 CGTAGTAACGCACGAGGTATAT 57.604 45.455 0.00 0.00 43.12 0.86
658 4299 3.859745 CGTAGTAACGCACGAGGTATA 57.140 47.619 0.00 0.00 43.12 1.47
659 4300 2.744787 CGTAGTAACGCACGAGGTAT 57.255 50.000 0.00 0.00 43.12 2.73
681 4322 9.806203 TCTCTCAAAATATTATTGCAACCAATG 57.194 29.630 15.18 3.63 41.58 2.82
713 4354 9.650539 TTCACACAATCAAATCTCTTTCAAAAA 57.349 25.926 0.00 0.00 0.00 1.94
714 4355 9.304731 CTTCACACAATCAAATCTCTTTCAAAA 57.695 29.630 0.00 0.00 0.00 2.44
715 4356 7.436080 GCTTCACACAATCAAATCTCTTTCAAA 59.564 33.333 0.00 0.00 0.00 2.69
716 4357 6.919662 GCTTCACACAATCAAATCTCTTTCAA 59.080 34.615 0.00 0.00 0.00 2.69
717 4358 6.039605 TGCTTCACACAATCAAATCTCTTTCA 59.960 34.615 0.00 0.00 0.00 2.69
718 4359 6.441274 TGCTTCACACAATCAAATCTCTTTC 58.559 36.000 0.00 0.00 0.00 2.62
719 4360 6.395426 TGCTTCACACAATCAAATCTCTTT 57.605 33.333 0.00 0.00 0.00 2.52
831 4472 8.137437 CCATACATTCATTCCTTTGGTATGTTC 58.863 37.037 0.00 0.00 36.51 3.18
835 4476 6.486657 CGACCATACATTCATTCCTTTGGTAT 59.513 38.462 0.00 0.00 36.41 2.73
838 4479 4.498009 GCGACCATACATTCATTCCTTTGG 60.498 45.833 0.00 0.00 0.00 3.28
851 4492 2.388310 TTCGGAAATGCGACCATACA 57.612 45.000 0.00 0.00 0.00 2.29
870 4511 1.227999 CGTGCGGTTGTGTCCATCTT 61.228 55.000 0.00 0.00 0.00 2.40
881 4522 3.308866 GCAAAATATCTACTCGTGCGGTT 59.691 43.478 0.00 0.00 0.00 4.44
889 4530 3.071167 AGTCCCCGGCAAAATATCTACTC 59.929 47.826 0.00 0.00 0.00 2.59
915 4556 4.559251 CGATCTCAGTTTCTAGTTTGTCCG 59.441 45.833 0.00 0.00 0.00 4.79
930 4571 1.728971 GCTGAAACCACACGATCTCAG 59.271 52.381 0.00 1.12 34.69 3.35
932 4573 1.079503 GGCTGAAACCACACGATCTC 58.920 55.000 0.00 0.00 0.00 2.75
933 4574 0.396435 TGGCTGAAACCACACGATCT 59.604 50.000 0.00 0.00 33.75 2.75
934 4575 2.927004 TGGCTGAAACCACACGATC 58.073 52.632 0.00 0.00 33.75 3.69
957 4598 1.300233 GGACGGATAGCGCCAAGAG 60.300 63.158 2.29 0.00 0.00 2.85
962 4603 3.992317 GGGAGGACGGATAGCGCC 61.992 72.222 2.29 0.00 0.00 6.53
963 4604 2.100879 ATTGGGAGGACGGATAGCGC 62.101 60.000 0.00 0.00 0.00 5.92
965 4606 0.038159 CGATTGGGAGGACGGATAGC 60.038 60.000 0.00 0.00 0.00 2.97
971 4612 2.104331 CGACCGATTGGGAGGACG 59.896 66.667 3.39 0.00 40.75 4.79
973 4614 2.412323 CGTCGACCGATTGGGAGGA 61.412 63.158 10.58 0.00 40.75 3.71
974 4615 2.104331 CGTCGACCGATTGGGAGG 59.896 66.667 10.58 0.00 40.75 4.30
975 4616 1.516386 CACGTCGACCGATTGGGAG 60.516 63.158 10.58 0.00 40.75 4.30
976 4617 1.929806 CTCACGTCGACCGATTGGGA 61.930 60.000 10.58 0.70 40.75 4.37
977 4618 1.516386 CTCACGTCGACCGATTGGG 60.516 63.158 10.58 0.00 40.75 4.12
978 4619 0.109458 TTCTCACGTCGACCGATTGG 60.109 55.000 10.58 0.00 40.70 3.16
979 4620 1.260206 CTTCTCACGTCGACCGATTG 58.740 55.000 10.58 2.42 40.70 2.67
980 4621 0.456312 GCTTCTCACGTCGACCGATT 60.456 55.000 10.58 0.00 40.70 3.34
981 4622 1.136984 GCTTCTCACGTCGACCGAT 59.863 57.895 10.58 0.00 40.70 4.18
982 4623 2.183858 CTGCTTCTCACGTCGACCGA 62.184 60.000 10.58 6.06 40.70 4.69
983 4624 1.797933 CTGCTTCTCACGTCGACCG 60.798 63.158 10.58 7.90 44.03 4.79
984 4625 0.455295 CTCTGCTTCTCACGTCGACC 60.455 60.000 10.58 0.00 0.00 4.79
985 4626 1.068287 GCTCTGCTTCTCACGTCGAC 61.068 60.000 5.18 5.18 0.00 4.20
986 4627 1.210413 GCTCTGCTTCTCACGTCGA 59.790 57.895 0.00 0.00 0.00 4.20
1039 4680 2.358615 TTGATGTGCCGAGCGCTT 60.359 55.556 13.26 0.00 40.03 4.68
1093 4734 1.433121 GGAGGAGGATCAGCAGGAAT 58.567 55.000 0.00 0.00 36.25 3.01
1561 5209 4.328440 CGGAGAGTGACAAGATCATCAAAC 59.672 45.833 0.00 0.00 40.28 2.93
1648 5305 3.120889 CGCAGATGCTCACGTATATTTGG 60.121 47.826 2.95 0.00 39.32 3.28
1684 5445 9.781834 TCATTTAGTATAAGCCATTGTTTTTCG 57.218 29.630 0.00 0.00 0.00 3.46
1770 5581 0.109919 TGTGTCTCGGAACATCGACG 60.110 55.000 0.00 0.00 35.18 5.12
1871 5691 9.224267 CATGGTATATAAGAAGTTTGCTAGCAT 57.776 33.333 20.13 2.56 0.00 3.79
1936 5758 7.870509 ATACACCATACGAGTAAAGTACTGA 57.129 36.000 0.00 0.00 39.59 3.41
1937 5759 8.186163 TGAATACACCATACGAGTAAAGTACTG 58.814 37.037 0.00 0.00 39.59 2.74
1942 5790 8.879759 ACAATTGAATACACCATACGAGTAAAG 58.120 33.333 13.59 0.00 0.00 1.85
1996 5877 7.806690 TCTCATACTTTTGACGAATGAAAAGG 58.193 34.615 0.00 0.00 41.51 3.11
2057 5938 3.691609 CCTTCTCCCTGCATTAAGTTGAC 59.308 47.826 0.00 0.00 0.00 3.18
2103 5984 2.904866 GCAACCAGACGGCCAACA 60.905 61.111 2.24 0.00 34.57 3.33
2154 6035 4.504858 GATCAACTTGGTTCGGTATGACT 58.495 43.478 0.00 0.00 0.00 3.41
2171 6052 5.677319 AGTTTTGATACTCCTCGGATCAA 57.323 39.130 0.00 0.00 37.71 2.57
2213 6094 2.610727 GCTAGGCCTGACGTTATCATCC 60.611 54.545 17.99 0.00 36.48 3.51
2254 6148 0.454196 GGTTGTCGTTGGTGTTGCTT 59.546 50.000 0.00 0.00 0.00 3.91
2350 6255 6.899892 AACCCTCTAGGAGATCAGAAAATT 57.100 37.500 0.00 0.00 39.89 1.82
2401 6306 1.433471 CGACATGCTCGCTCCACTA 59.567 57.895 0.00 0.00 35.06 2.74
2449 6354 1.099295 ACGACGACGATGCCCATAGA 61.099 55.000 15.32 0.00 42.66 1.98
2452 6357 0.318699 CATACGACGACGATGCCCAT 60.319 55.000 15.32 0.00 42.66 4.00
2485 6390 2.679837 CAAGTGAATCACATCCTTCCGG 59.320 50.000 16.38 0.00 36.74 5.14
2492 6397 1.089920 AGCGCCAAGTGAATCACATC 58.910 50.000 16.38 0.67 36.74 3.06
2496 6401 1.438651 GTGTAGCGCCAAGTGAATCA 58.561 50.000 2.29 0.00 0.00 2.57
2498 6403 0.036164 TGGTGTAGCGCCAAGTGAAT 59.964 50.000 2.29 0.00 41.39 2.57
2512 6417 3.570212 GGGTCTGCCAGGTGGTGT 61.570 66.667 0.00 0.00 37.57 4.16
2574 6479 1.669440 GTCAGTGTTCACGGGCCTA 59.331 57.895 0.84 0.00 0.00 3.93
2587 6492 0.034574 TTATTGCGCATGGGGTCAGT 60.035 50.000 12.75 1.62 0.00 3.41
2607 6512 6.747414 TGTTCCAGTGATAACTATGGCTAT 57.253 37.500 9.01 0.00 32.63 2.97
2618 6523 2.419990 CCGGCATCTTGTTCCAGTGATA 60.420 50.000 0.00 0.00 0.00 2.15
2646 6551 4.411540 AGATGGTCTGACTTGCTATGGATT 59.588 41.667 7.85 0.00 0.00 3.01
2652 6557 3.367395 CGACAAGATGGTCTGACTTGCTA 60.367 47.826 7.85 0.00 42.93 3.49
2694 6599 0.250513 GTCGGGGAAGAAGCAGATGT 59.749 55.000 0.00 0.00 0.00 3.06
2705 6610 0.399075 GGTTCCAGAAAGTCGGGGAA 59.601 55.000 0.00 0.00 34.12 3.97
2718 6623 0.394938 TTTGCTCTAGCGTGGTTCCA 59.605 50.000 0.00 0.00 45.83 3.53
2743 6648 0.623723 ATATTCAAGGGGGTGTGCGT 59.376 50.000 0.00 0.00 0.00 5.24
2795 6700 1.062525 GATGGTTGCGATGGCGAAC 59.937 57.895 0.00 0.00 44.10 3.95
2821 6726 4.397103 CCCGGTAGTAGGAAAAATTTGTCC 59.603 45.833 18.47 18.47 0.00 4.02
2822 6727 5.005740 ACCCGGTAGTAGGAAAAATTTGTC 58.994 41.667 0.00 0.00 0.00 3.18
2823 6728 4.763279 CACCCGGTAGTAGGAAAAATTTGT 59.237 41.667 0.00 0.00 0.00 2.83
2824 6729 4.763279 ACACCCGGTAGTAGGAAAAATTTG 59.237 41.667 0.00 0.00 0.00 2.32
2825 6730 4.989277 ACACCCGGTAGTAGGAAAAATTT 58.011 39.130 0.00 0.00 0.00 1.82
2826 6731 4.645863 ACACCCGGTAGTAGGAAAAATT 57.354 40.909 0.00 0.00 0.00 1.82
2827 6732 5.349061 CTACACCCGGTAGTAGGAAAAAT 57.651 43.478 18.15 0.00 43.73 1.82
2828 6733 4.806640 CTACACCCGGTAGTAGGAAAAA 57.193 45.455 18.15 0.00 43.73 1.94
2848 6753 8.631797 ACGTACAAAATAAAAATGGGTGTAACT 58.368 29.630 0.00 0.00 36.74 2.24
2849 6754 8.800231 ACGTACAAAATAAAAATGGGTGTAAC 57.200 30.769 0.00 0.00 0.00 2.50
2850 6755 9.813446 AAACGTACAAAATAAAAATGGGTGTAA 57.187 25.926 0.00 0.00 0.00 2.41
2851 6756 9.813446 AAAACGTACAAAATAAAAATGGGTGTA 57.187 25.926 0.00 0.00 0.00 2.90
2852 6757 8.719560 AAAACGTACAAAATAAAAATGGGTGT 57.280 26.923 0.00 0.00 0.00 4.16
2871 6776 8.292448 CGGTATGGTAGATACTACATAAAACGT 58.708 37.037 10.39 0.00 0.00 3.99
2872 6777 7.752239 CCGGTATGGTAGATACTACATAAAACG 59.248 40.741 10.39 7.07 0.00 3.60
2873 6778 8.796475 TCCGGTATGGTAGATACTACATAAAAC 58.204 37.037 0.00 2.55 39.52 2.43
2874 6779 8.938801 TCCGGTATGGTAGATACTACATAAAA 57.061 34.615 0.00 0.00 39.52 1.52
2875 6780 8.166061 ACTCCGGTATGGTAGATACTACATAAA 58.834 37.037 0.00 0.00 39.52 1.40
2876 6781 7.609146 CACTCCGGTATGGTAGATACTACATAA 59.391 40.741 0.00 0.00 39.52 1.90
2877 6782 7.108194 CACTCCGGTATGGTAGATACTACATA 58.892 42.308 0.00 4.85 39.52 2.29
2878 6783 5.944599 CACTCCGGTATGGTAGATACTACAT 59.055 44.000 0.00 5.59 39.52 2.29
2879 6784 5.163163 ACACTCCGGTATGGTAGATACTACA 60.163 44.000 0.00 0.00 39.52 2.74
2880 6785 5.312079 ACACTCCGGTATGGTAGATACTAC 58.688 45.833 0.00 0.00 39.52 2.73
2881 6786 5.573380 ACACTCCGGTATGGTAGATACTA 57.427 43.478 0.00 0.00 39.52 1.82
2882 6787 4.450305 ACACTCCGGTATGGTAGATACT 57.550 45.455 0.00 0.00 39.52 2.12
2883 6788 6.192234 CATACACTCCGGTATGGTAGATAC 57.808 45.833 0.00 0.00 44.34 2.24
2892 6797 3.507411 AGGCATACATACACTCCGGTAT 58.493 45.455 0.00 0.00 34.36 2.73
2893 6798 2.953453 AGGCATACATACACTCCGGTA 58.047 47.619 0.00 0.00 0.00 4.02
2894 6799 1.789523 AGGCATACATACACTCCGGT 58.210 50.000 0.00 0.00 0.00 5.28
2895 6800 2.891580 ACTAGGCATACATACACTCCGG 59.108 50.000 0.00 0.00 0.00 5.14
2896 6801 5.183331 ACATACTAGGCATACATACACTCCG 59.817 44.000 0.00 0.00 0.00 4.63
2897 6802 6.591750 ACATACTAGGCATACATACACTCC 57.408 41.667 0.00 0.00 0.00 3.85
2898 6803 8.338072 ACTACATACTAGGCATACATACACTC 57.662 38.462 0.00 0.00 0.00 3.51
2899 6804 9.976776 ATACTACATACTAGGCATACATACACT 57.023 33.333 0.00 0.00 0.00 3.55
2901 6806 9.749340 ACATACTACATACTAGGCATACATACA 57.251 33.333 0.00 0.00 0.00 2.29
3026 6931 8.517878 GCATGTGAGCCTATGTTTTTATCATAT 58.482 33.333 0.00 0.00 0.00 1.78
3027 6932 7.501892 TGCATGTGAGCCTATGTTTTTATCATA 59.498 33.333 0.00 0.00 0.00 2.15
3028 6933 6.321945 TGCATGTGAGCCTATGTTTTTATCAT 59.678 34.615 0.00 0.00 0.00 2.45
3029 6934 5.651576 TGCATGTGAGCCTATGTTTTTATCA 59.348 36.000 0.00 0.00 0.00 2.15
3030 6935 6.135290 TGCATGTGAGCCTATGTTTTTATC 57.865 37.500 0.00 0.00 0.00 1.75
3031 6936 6.528537 TTGCATGTGAGCCTATGTTTTTAT 57.471 33.333 0.00 0.00 0.00 1.40
3032 6937 5.973899 TTGCATGTGAGCCTATGTTTTTA 57.026 34.783 0.00 0.00 0.00 1.52
3033 6938 4.870123 TTGCATGTGAGCCTATGTTTTT 57.130 36.364 0.00 0.00 0.00 1.94
3034 6939 5.410355 AATTGCATGTGAGCCTATGTTTT 57.590 34.783 0.00 0.00 0.00 2.43
3035 6940 5.410355 AAATTGCATGTGAGCCTATGTTT 57.590 34.783 0.00 0.00 0.00 2.83
3036 6941 5.410355 AAAATTGCATGTGAGCCTATGTT 57.590 34.783 0.00 0.00 0.00 2.71
3037 6942 5.410355 AAAAATTGCATGTGAGCCTATGT 57.590 34.783 0.00 0.00 0.00 2.29
3056 6961 5.298276 ACTCCAAAGCGAGTTATGTGAAAAA 59.702 36.000 0.00 0.00 40.23 1.94
3057 6962 4.819630 ACTCCAAAGCGAGTTATGTGAAAA 59.180 37.500 0.00 0.00 40.23 2.29
3058 6963 4.385825 ACTCCAAAGCGAGTTATGTGAAA 58.614 39.130 0.00 0.00 40.23 2.69
3059 6964 4.002906 ACTCCAAAGCGAGTTATGTGAA 57.997 40.909 0.00 0.00 40.23 3.18
3060 6965 3.678056 ACTCCAAAGCGAGTTATGTGA 57.322 42.857 0.00 0.00 40.23 3.58
3061 6966 5.005779 GTGATACTCCAAAGCGAGTTATGTG 59.994 44.000 0.00 0.00 40.23 3.21
3062 6967 5.109903 GTGATACTCCAAAGCGAGTTATGT 58.890 41.667 0.00 0.00 40.23 2.29
3063 6968 5.109210 TGTGATACTCCAAAGCGAGTTATG 58.891 41.667 0.00 0.00 40.23 1.90
3064 6969 5.127194 TCTGTGATACTCCAAAGCGAGTTAT 59.873 40.000 0.00 0.00 40.23 1.89
3065 6970 4.461431 TCTGTGATACTCCAAAGCGAGTTA 59.539 41.667 0.00 0.00 40.23 2.24
3066 6971 3.258372 TCTGTGATACTCCAAAGCGAGTT 59.742 43.478 0.00 0.00 40.23 3.01
3067 6972 2.826128 TCTGTGATACTCCAAAGCGAGT 59.174 45.455 0.00 0.00 45.15 4.18
3068 6973 3.510388 TCTGTGATACTCCAAAGCGAG 57.490 47.619 0.00 0.00 35.88 5.03
3069 6974 5.791336 ATATCTGTGATACTCCAAAGCGA 57.209 39.130 0.00 0.00 0.00 4.93
3070 6975 6.682746 ACTATATCTGTGATACTCCAAAGCG 58.317 40.000 0.00 0.00 0.00 4.68
3436 7341 1.413227 GGGTCTAGGTCCCAGTGCTAT 60.413 57.143 15.77 0.00 44.05 2.97
3437 7342 0.032416 GGGTCTAGGTCCCAGTGCTA 60.032 60.000 15.77 0.00 44.05 3.49
3438 7343 1.306226 GGGTCTAGGTCCCAGTGCT 60.306 63.158 15.77 0.00 44.05 4.40
3462 7367 2.033448 TACAAGGCGGCTTGGTGG 59.967 61.111 42.78 26.01 38.55 4.61
3491 7396 1.750780 GGGAAGCTAGGCCACAAGC 60.751 63.158 14.96 14.96 42.60 4.01
3492 7397 0.329596 AAGGGAAGCTAGGCCACAAG 59.670 55.000 5.01 0.00 0.00 3.16
3619 7524 2.368548 TCTCTCTCTCTCTCTCCATCCG 59.631 54.545 0.00 0.00 0.00 4.18
3622 7527 4.560739 TCTCTCTCTCTCTCTCTCTCCAT 58.439 47.826 0.00 0.00 0.00 3.41
3630 7535 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3636 7541 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3637 7542 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3638 7543 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3639 7544 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3640 7545 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
3641 7546 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
3642 7547 4.078922 TCCTCTCTCTCTCTCTCTCTCTCT 60.079 50.000 0.00 0.00 0.00 3.10
3669 7574 1.351350 GTCTACCCACTGCCCTCTTTT 59.649 52.381 0.00 0.00 0.00 2.27
3704 7609 0.752054 TGCTTTGCTCTTTGTTGGGG 59.248 50.000 0.00 0.00 0.00 4.96
3758 7904 6.089820 GCAATGGTTCATATCAAACAACTGTG 59.910 38.462 0.00 0.00 0.00 3.66
3759 7905 6.158598 GCAATGGTTCATATCAAACAACTGT 58.841 36.000 0.00 0.00 0.00 3.55
3787 7933 7.176340 ACACGGGGTATGATCTAGTAATCTTAC 59.824 40.741 0.00 8.10 36.38 2.34
3970 8118 4.264614 CGAATGCAGAAATGCTCAATTGTC 59.735 41.667 5.13 0.00 35.49 3.18
3974 8122 3.428452 CCACGAATGCAGAAATGCTCAAT 60.428 43.478 1.53 0.00 35.49 2.57
4035 8183 2.322161 GCAGCAATGTCACATCAACAC 58.678 47.619 0.00 0.00 0.00 3.32
4112 8261 7.144661 CCAACAACTTTCATACTAACATGCAA 58.855 34.615 0.00 0.00 0.00 4.08
4117 8266 9.899661 ATATAGCCAACAACTTTCATACTAACA 57.100 29.630 0.00 0.00 0.00 2.41
4211 8360 9.669887 ACCATGCATGTGAAAAATATTACAATT 57.330 25.926 24.58 0.00 0.00 2.32
4213 8362 8.933807 CAACCATGCATGTGAAAAATATTACAA 58.066 29.630 24.58 0.00 0.00 2.41
4277 8426 2.164219 CCATGGGAAAAGATTCACCACG 59.836 50.000 2.85 0.00 38.24 4.94
4298 8447 2.033801 GTCACCATGGCATGCTAACATC 59.966 50.000 22.02 0.00 32.87 3.06
4310 8459 5.065914 TGAAAGAGAAAAGAGTCACCATGG 58.934 41.667 11.19 11.19 0.00 3.66
4318 8467 7.609532 CCACCTCAATATGAAAGAGAAAAGAGT 59.390 37.037 0.00 0.00 0.00 3.24
4421 8570 6.928492 GTGTTTCTATTGAAAAGGCAAATGGA 59.072 34.615 3.84 0.00 42.94 3.41
4508 8657 8.820831 CATAGAATTAGTGGGGAATCATCTACT 58.179 37.037 0.00 0.00 0.00 2.57
4566 8715 2.470821 AGAACTCGACGAACACCTTTG 58.529 47.619 0.00 0.00 0.00 2.77
4610 8759 2.310349 TGCCCTTAAAAGAGGCCATACA 59.690 45.455 5.01 0.09 39.88 2.29
4891 16662 6.744112 TCACCAAGCAAAAAGGTTATACAAG 58.256 36.000 0.00 0.00 35.88 3.16
5073 16854 6.745450 CACTTTTTACTTCTTTTTGCACTCGA 59.255 34.615 0.00 0.00 0.00 4.04
5094 16875 2.162681 GTTAGCTGATGCCAACCACTT 58.837 47.619 0.00 0.00 40.80 3.16
5154 16939 6.782988 TCTGTCAGTAGATTAGGGAAATAGGG 59.217 42.308 0.00 0.00 0.00 3.53
5212 17185 7.546667 ACCAATGACTTCAATCAATAATGCAAC 59.453 33.333 0.00 0.00 30.82 4.17
5319 17293 2.363788 TAGAGGTAAGCAGTGCAACG 57.636 50.000 19.20 0.00 45.86 4.10
5409 17411 4.568359 GCATCAACAGACACGATAGATTGT 59.432 41.667 0.00 0.00 41.38 2.71
5422 17424 6.323739 TGGAGTGTATATGTAGCATCAACAGA 59.676 38.462 0.00 0.00 0.00 3.41
5426 17428 5.602561 AGGTGGAGTGTATATGTAGCATCAA 59.397 40.000 0.00 0.00 0.00 2.57
5508 17528 5.753744 TGCTATACTTTTGTTGTCGTTTGG 58.246 37.500 0.00 0.00 0.00 3.28
5622 17927 9.638239 GAACTTGTTTCATAATTTGGCATAAGA 57.362 29.630 0.00 0.00 33.94 2.10
5642 17947 5.603170 AGCCATTTTATCCCATGAACTTG 57.397 39.130 0.00 0.00 0.00 3.16
5771 18076 9.448587 AGGTATTATAAGGTTACACCAAGAGAT 57.551 33.333 0.00 0.00 41.95 2.75
5892 18198 2.029380 GGGTTGGTTCAAATGTAGCCAC 60.029 50.000 0.00 0.00 0.00 5.01
5919 18225 3.408853 GTACTCCCCACCCCAGCC 61.409 72.222 0.00 0.00 0.00 4.85
5941 18247 1.003718 GTTCCTGTTGCTACCGCCT 60.004 57.895 0.00 0.00 34.43 5.52
6009 18315 1.958205 CATCGATCGAGCCCCTTGC 60.958 63.158 23.84 0.00 41.71 4.01
6032 18338 2.836262 ACGTAGTAGATGGAGTCGAGG 58.164 52.381 0.00 0.00 41.94 4.63
6064 18370 2.260434 GCAGTGCCCATTGCTGTG 59.740 61.111 2.85 0.00 40.37 3.66
6072 18378 0.035725 CTCTCAATGAGCAGTGCCCA 60.036 55.000 12.58 6.65 35.84 5.36
6078 18384 1.817357 TGTTGCCTCTCAATGAGCAG 58.183 50.000 5.18 4.28 41.35 4.24
6081 18387 2.095567 CGGTTTGTTGCCTCTCAATGAG 60.096 50.000 3.38 3.38 42.30 2.90
6161 18467 0.389948 CCTTCGCTGCTTACCGAACT 60.390 55.000 0.00 0.00 38.40 3.01
6183 18489 1.586564 CTGAACCCGAGCGATCGAC 60.587 63.158 26.68 12.91 34.64 4.20
6220 18526 2.026636 AGCCGCTAACTGAACCCAATAA 60.027 45.455 0.00 0.00 0.00 1.40
6221 18527 1.557832 AGCCGCTAACTGAACCCAATA 59.442 47.619 0.00 0.00 0.00 1.90
6238 18544 0.179081 ACCCGAGCGATTTCTTAGCC 60.179 55.000 0.00 0.00 0.00 3.93
6241 18547 2.232941 ACTGAACCCGAGCGATTTCTTA 59.767 45.455 0.00 0.00 0.00 2.10
6245 18551 2.028385 ACTAACTGAACCCGAGCGATTT 60.028 45.455 0.00 0.00 0.00 2.17
6246 18552 1.549170 ACTAACTGAACCCGAGCGATT 59.451 47.619 0.00 0.00 0.00 3.34
6251 18557 1.741706 TCGCTACTAACTGAACCCGAG 59.258 52.381 0.00 0.00 0.00 4.63
6253 18559 2.163010 TCTTCGCTACTAACTGAACCCG 59.837 50.000 0.00 0.00 0.00 5.28
6260 18566 4.916249 CGAACTGTTTCTTCGCTACTAACT 59.084 41.667 0.00 0.00 34.59 2.24
6266 18572 3.637998 ACTCGAACTGTTTCTTCGCTA 57.362 42.857 0.00 0.00 40.29 4.26
6267 18573 2.510768 ACTCGAACTGTTTCTTCGCT 57.489 45.000 0.00 0.00 40.29 4.93
6274 18580 4.439057 TGCTAACTGAACTCGAACTGTTT 58.561 39.130 11.80 0.00 32.36 2.83
6277 18583 3.426859 CACTGCTAACTGAACTCGAACTG 59.573 47.826 0.00 0.00 0.00 3.16
6278 18584 3.318275 TCACTGCTAACTGAACTCGAACT 59.682 43.478 0.00 0.00 0.00 3.01
6279 18585 3.639538 TCACTGCTAACTGAACTCGAAC 58.360 45.455 0.00 0.00 0.00 3.95
6280 18586 4.299155 CTTCACTGCTAACTGAACTCGAA 58.701 43.478 0.00 0.00 0.00 3.71
6284 18590 2.972713 TCCCTTCACTGCTAACTGAACT 59.027 45.455 0.00 0.00 0.00 3.01
6298 18604 1.000171 CATGAGCGATCGATCCCTTCA 60.000 52.381 28.63 18.58 0.00 3.02
6331 18637 2.223805 TGAACATGAGTGATCGATCCCG 60.224 50.000 22.31 7.04 30.36 5.14
6371 18677 2.309755 TCCTGAACCCAGCAATTGATCT 59.690 45.455 10.34 0.00 39.07 2.75
6372 18678 2.726821 TCCTGAACCCAGCAATTGATC 58.273 47.619 10.34 0.00 39.07 2.92
6379 18685 0.843309 TTCACTTCCTGAACCCAGCA 59.157 50.000 0.00 0.00 39.07 4.41
6384 18690 2.087646 GAGGCATTCACTTCCTGAACC 58.912 52.381 0.00 0.00 41.87 3.62
6409 18716 2.699954 CCATGTTCGCTAACTGAACCT 58.300 47.619 2.53 0.00 43.95 3.50
6439 18746 2.448153 TTTCTCTCGTACACGCGCGT 62.448 55.000 32.73 32.73 39.60 6.01
6441 18748 1.000233 TGTTTCTCTCGTACACGCGC 61.000 55.000 5.73 0.00 39.60 6.86
6461 18768 2.469826 CGAGCGATATAGTGGTTTGCA 58.530 47.619 0.00 0.00 0.00 4.08
6468 18775 1.154016 CGGGCCGAGCGATATAGTG 60.154 63.158 24.41 0.00 0.00 2.74
6504 18812 4.114015 AGGAATTTTTCGGGGAGTTCTT 57.886 40.909 0.00 0.00 0.00 2.52
6505 18813 3.808834 AGGAATTTTTCGGGGAGTTCT 57.191 42.857 0.00 0.00 0.00 3.01
6514 18822 2.295909 TGTGAGGGCAAGGAATTTTTCG 59.704 45.455 0.00 0.00 0.00 3.46
6515 18823 4.221482 AGATGTGAGGGCAAGGAATTTTTC 59.779 41.667 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.