Multiple sequence alignment - TraesCS6B01G200400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G200400 chr6B 100.000 2902 0 0 4962 7863 240246446 240243545 0.000000e+00 5360.0
1 TraesCS6B01G200400 chr6B 100.000 2217 0 0 1 2217 240251407 240249191 0.000000e+00 4095.0
2 TraesCS6B01G200400 chr6B 100.000 1644 0 0 2642 4285 240248766 240247123 0.000000e+00 3037.0
3 TraesCS6B01G200400 chr6B 94.585 554 24 5 2642 3190 138299568 138299016 0.000000e+00 852.0
4 TraesCS6B01G200400 chr6B 90.955 597 45 7 2709 3301 415463076 415462485 0.000000e+00 795.0
5 TraesCS6B01G200400 chr6B 89.451 474 42 8 1736 2205 138298935 138299404 6.790000e-165 592.0
6 TraesCS6B01G200400 chr6B 89.530 468 37 6 5580 6036 266304068 266303602 4.090000e-162 582.0
7 TraesCS6B01G200400 chr6B 87.866 478 54 4 1742 2217 183359909 183360384 6.890000e-155 558.0
8 TraesCS6B01G200400 chr6B 77.752 436 87 8 7260 7690 707188727 707188297 7.830000e-65 259.0
9 TraesCS6B01G200400 chr6B 97.541 122 3 0 142 263 240251150 240251029 8.000000e-50 209.0
10 TraesCS6B01G200400 chr6B 97.541 122 3 0 258 379 240251266 240251145 8.000000e-50 209.0
11 TraesCS6B01G200400 chr6B 97.196 107 3 0 5087 5193 674974109 674974003 1.740000e-41 182.0
12 TraesCS6B01G200400 chr6D 95.547 1033 35 4 712 1737 140156453 140155425 0.000000e+00 1642.0
13 TraesCS6B01G200400 chr6D 95.544 965 33 7 6080 7042 140154508 140153552 0.000000e+00 1535.0
14 TraesCS6B01G200400 chr6D 89.362 752 68 9 7030 7777 140153535 140152792 0.000000e+00 935.0
15 TraesCS6B01G200400 chr6D 93.558 326 10 6 3345 3665 140155196 140154877 7.140000e-130 475.0
16 TraesCS6B01G200400 chr6D 93.617 282 11 2 3663 3944 140154853 140154579 1.580000e-111 414.0
17 TraesCS6B01G200400 chr6D 97.059 34 0 1 3301 3333 140155419 140155386 1.000000e-03 56.5
18 TraesCS6B01G200400 chr6A 95.354 904 22 3 6035 6937 184709177 184708293 0.000000e+00 1419.0
19 TraesCS6B01G200400 chr6A 94.295 894 33 6 836 1721 184710712 184709829 0.000000e+00 1352.0
20 TraesCS6B01G200400 chr6A 86.022 651 56 21 3304 3944 184709799 184709174 0.000000e+00 665.0
21 TraesCS6B01G200400 chr6A 92.115 279 18 4 3944 4221 483901669 483901944 2.660000e-104 390.0
22 TraesCS6B01G200400 chr6A 90.747 281 21 5 3944 4221 423242120 423242398 3.470000e-98 370.0
23 TraesCS6B01G200400 chr6A 93.671 158 6 4 691 848 184713101 184712948 4.740000e-57 233.0
24 TraesCS6B01G200400 chr5B 98.036 662 11 2 2642 3301 65535933 65536594 0.000000e+00 1149.0
25 TraesCS6B01G200400 chr5B 98.551 483 5 2 1736 2217 65535337 65535818 0.000000e+00 852.0
26 TraesCS6B01G200400 chr5B 94.118 306 17 1 5281 5586 531741465 531741161 1.550000e-126 464.0
27 TraesCS6B01G200400 chr5B 96.262 107 4 0 5087 5193 559393875 559393769 8.110000e-40 176.0
28 TraesCS6B01G200400 chr5B 95.327 107 5 0 5087 5193 469545833 469545727 3.770000e-38 171.0
29 TraesCS6B01G200400 chr5B 95.960 99 4 0 5095 5193 400764797 400764699 2.270000e-35 161.0
30 TraesCS6B01G200400 chr7B 94.721 663 22 9 2642 3301 466711962 466712614 0.000000e+00 1018.0
31 TraesCS6B01G200400 chr7B 88.253 647 66 8 2662 3301 15931910 15932553 0.000000e+00 765.0
32 TraesCS6B01G200400 chr7B 96.269 402 14 1 1817 2217 466711313 466711714 0.000000e+00 658.0
33 TraesCS6B01G200400 chr1D 93.263 668 34 10 2642 3301 285110747 285110083 0.000000e+00 974.0
34 TraesCS6B01G200400 chr3B 89.762 713 38 14 5278 5956 187533873 187533162 0.000000e+00 880.0
35 TraesCS6B01G200400 chr3B 92.479 585 32 10 2642 3219 62973736 62973157 0.000000e+00 826.0
36 TraesCS6B01G200400 chr3B 98.010 402 7 1 1817 2217 42046208 42045807 0.000000e+00 697.0
37 TraesCS6B01G200400 chr3B 90.063 473 41 6 1736 2205 807748202 807748671 6.750000e-170 608.0
38 TraesCS6B01G200400 chr3B 97.735 309 7 0 5278 5586 478015735 478015427 4.180000e-147 532.0
39 TraesCS6B01G200400 chr3B 96.764 309 10 0 5278 5586 29846162 29845854 4.210000e-142 516.0
40 TraesCS6B01G200400 chr3B 96.764 309 10 0 5278 5586 191185295 191185603 4.210000e-142 516.0
41 TraesCS6B01G200400 chr3B 93.417 319 16 4 3944 4258 31263156 31262839 1.190000e-127 468.0
42 TraesCS6B01G200400 chr3B 93.458 107 7 0 5087 5193 31262163 31262057 8.170000e-35 159.0
43 TraesCS6B01G200400 chr3B 95.506 89 2 1 5201 5287 29847591 29847503 2.960000e-29 141.0
44 TraesCS6B01G200400 chr3B 93.684 95 5 1 5194 5287 191183875 191183969 2.960000e-29 141.0
45 TraesCS6B01G200400 chr3B 92.553 94 4 2 5194 5287 478017172 478017082 1.780000e-26 132.0
46 TraesCS6B01G200400 chr2A 84.013 907 98 25 6969 7863 356711203 356712074 0.000000e+00 828.0
47 TraesCS6B01G200400 chr5A 88.018 651 69 9 2657 3301 239403571 239402924 0.000000e+00 761.0
48 TraesCS6B01G200400 chr5A 83.066 437 70 3 7252 7688 52346476 52346908 2.060000e-105 394.0
49 TraesCS6B01G200400 chr5A 82.877 438 70 4 7251 7688 591003473 591003905 9.570000e-104 388.0
50 TraesCS6B01G200400 chr1A 87.846 650 72 7 2657 3301 23017592 23018239 0.000000e+00 756.0
51 TraesCS6B01G200400 chr1A 84.507 142 18 4 7247 7385 207549892 207549752 3.830000e-28 137.0
52 TraesCS6B01G200400 chr1B 89.809 471 39 8 5580 6047 311142467 311142003 5.250000e-166 595.0
53 TraesCS6B01G200400 chr1B 76.224 715 129 34 6969 7662 3871390 3870696 2.720000e-89 340.0
54 TraesCS6B01G200400 chrUn 89.348 460 42 6 5580 6036 337949823 337950278 8.850000e-159 571.0
55 TraesCS6B01G200400 chrUn 89.348 460 42 6 5580 6036 337959914 337959459 8.850000e-159 571.0
56 TraesCS6B01G200400 chrUn 89.348 460 42 6 5580 6036 427500622 427501077 8.850000e-159 571.0
57 TraesCS6B01G200400 chrUn 82.215 298 44 7 1048 1342 281636422 281636131 1.690000e-61 248.0
58 TraesCS6B01G200400 chrUn 82.215 298 44 7 1048 1342 281643296 281643005 1.690000e-61 248.0
59 TraesCS6B01G200400 chrUn 82.215 298 44 7 1048 1342 312316280 312315989 1.690000e-61 248.0
60 TraesCS6B01G200400 chr4B 88.075 478 46 11 1733 2207 613292722 613292253 2.480000e-154 556.0
61 TraesCS6B01G200400 chr4B 79.010 505 86 15 7185 7681 171213779 171213287 2.120000e-85 327.0
62 TraesCS6B01G200400 chr7D 87.526 489 48 11 1736 2217 348091899 348092381 3.210000e-153 553.0
63 TraesCS6B01G200400 chr7D 83.514 461 70 6 5580 6038 277548160 277548616 7.290000e-115 425.0
64 TraesCS6B01G200400 chr7D 79.310 609 110 12 7247 7845 275780987 275781589 5.680000e-111 412.0
65 TraesCS6B01G200400 chr7D 86.581 313 36 1 1044 1356 498495984 498496290 2.720000e-89 340.0
66 TraesCS6B01G200400 chr4A 87.526 489 47 13 1736 2217 25796099 25795618 3.210000e-153 553.0
67 TraesCS6B01G200400 chr4A 88.172 465 42 12 5580 6038 701946122 701945665 6.940000e-150 542.0
68 TraesCS6B01G200400 chr4A 97.078 308 7 2 5280 5586 741492549 741492243 1.170000e-142 518.0
69 TraesCS6B01G200400 chr4A 79.588 485 77 17 7176 7649 743059308 743059781 2.120000e-85 327.0
70 TraesCS6B01G200400 chr4A 98.020 101 2 0 5486 5586 729777405 729777305 8.110000e-40 176.0
71 TraesCS6B01G200400 chr4A 92.632 95 5 2 5194 5287 729777668 729777575 1.380000e-27 135.0
72 TraesCS6B01G200400 chr2B 93.983 349 16 3 3941 4285 668213032 668213379 2.510000e-144 523.0
73 TraesCS6B01G200400 chr2B 96.417 307 11 0 5280 5586 128380443 128380137 2.530000e-139 507.0
74 TraesCS6B01G200400 chr2B 95.793 309 13 0 5278 5586 733877781 733878089 4.240000e-137 499.0
75 TraesCS6B01G200400 chr2B 92.690 342 20 2 3944 4285 636769115 636768779 9.170000e-134 488.0
76 TraesCS6B01G200400 chr2B 89.835 364 28 2 3930 4285 717046383 717046745 7.190000e-125 459.0
77 TraesCS6B01G200400 chr2B 91.900 321 14 1 5278 5586 776405765 776405445 9.370000e-119 438.0
78 TraesCS6B01G200400 chr2B 90.173 346 17 5 3941 4285 668202052 668202381 1.210000e-117 435.0
79 TraesCS6B01G200400 chr2B 95.327 107 5 0 5084 5190 717048106 717048212 3.770000e-38 171.0
80 TraesCS6B01G200400 chr2B 93.269 104 6 1 5090 5193 636767813 636767711 1.370000e-32 152.0
81 TraesCS6B01G200400 chr2B 92.708 96 5 1 5194 5287 128381886 128381791 3.830000e-28 137.0
82 TraesCS6B01G200400 chr2B 91.209 91 4 3 5198 5287 158637444 158637357 3.850000e-23 121.0
83 TraesCS6B01G200400 chr2B 93.827 81 4 1 5194 5273 776406233 776406153 3.850000e-23 121.0
84 TraesCS6B01G200400 chr2B 89.691 97 4 4 5194 5287 581455553 581455460 1.390000e-22 119.0
85 TraesCS6B01G200400 chr2B 89.583 96 5 3 5194 5287 733876346 733876438 4.990000e-22 117.0
86 TraesCS6B01G200400 chr3A 85.376 465 54 11 5580 6038 555333878 555334334 3.320000e-128 470.0
87 TraesCS6B01G200400 chr3A 82.488 434 72 3 7248 7681 652686666 652686237 2.070000e-100 377.0
88 TraesCS6B01G200400 chr3A 82.938 422 67 4 7260 7681 672682205 672681789 7.450000e-100 375.0
89 TraesCS6B01G200400 chr3A 81.879 298 45 7 1048 1342 7791484 7791193 7.880000e-60 243.0
90 TraesCS6B01G200400 chr2D 83.478 460 69 7 5580 6036 51631154 51630699 9.430000e-114 422.0
91 TraesCS6B01G200400 chr2D 87.500 304 23 13 6969 7263 285345894 285346191 3.520000e-88 337.0
92 TraesCS6B01G200400 chr5D 82.378 471 71 7 7247 7711 398571735 398572199 4.420000e-107 399.0
93 TraesCS6B01G200400 chr5D 82.791 430 69 4 7252 7678 62301518 62301945 5.760000e-101 379.0
94 TraesCS6B01G200400 chr4D 76.987 717 121 30 6967 7661 455312091 455312785 3.470000e-98 370.0
95 TraesCS6B01G200400 chr7A 87.541 305 32 1 1044 1348 564279656 564279954 1.620000e-91 348.0
96 TraesCS6B01G200400 chr7A 87.589 282 28 7 3940 4219 76523309 76523585 3.540000e-83 320.0
97 TraesCS6B01G200400 chr7A 87.456 287 21 7 3939 4221 619171959 619171684 4.580000e-82 316.0
98 TraesCS6B01G200400 chr3D 82.274 299 42 9 1048 1342 1279610 1279901 1.690000e-61 248.0
99 TraesCS6B01G200400 chr3D 79.121 364 62 5 7255 7606 602778230 602777869 1.020000e-58 239.0
100 TraesCS6B01G200400 chr3D 89.623 106 8 3 2114 2217 611021516 611021412 1.780000e-26 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G200400 chr6B 240243545 240251407 7862 True 2582.000000 5360 99.0164 1 7863 5 chr6B.!!$R6 7862
1 TraesCS6B01G200400 chr6B 138299016 138299568 552 True 852.000000 852 94.5850 2642 3190 1 chr6B.!!$R1 548
2 TraesCS6B01G200400 chr6B 415462485 415463076 591 True 795.000000 795 90.9550 2709 3301 1 chr6B.!!$R3 592
3 TraesCS6B01G200400 chr6D 140152792 140156453 3661 True 842.916667 1642 94.1145 712 7777 6 chr6D.!!$R1 7065
4 TraesCS6B01G200400 chr6A 184708293 184713101 4808 True 917.250000 1419 92.3355 691 6937 4 chr6A.!!$R1 6246
5 TraesCS6B01G200400 chr5B 65535337 65536594 1257 False 1000.500000 1149 98.2935 1736 3301 2 chr5B.!!$F1 1565
6 TraesCS6B01G200400 chr7B 466711313 466712614 1301 False 838.000000 1018 95.4950 1817 3301 2 chr7B.!!$F2 1484
7 TraesCS6B01G200400 chr7B 15931910 15932553 643 False 765.000000 765 88.2530 2662 3301 1 chr7B.!!$F1 639
8 TraesCS6B01G200400 chr1D 285110083 285110747 664 True 974.000000 974 93.2630 2642 3301 1 chr1D.!!$R1 659
9 TraesCS6B01G200400 chr3B 187533162 187533873 711 True 880.000000 880 89.7620 5278 5956 1 chr3B.!!$R3 678
10 TraesCS6B01G200400 chr3B 62973157 62973736 579 True 826.000000 826 92.4790 2642 3219 1 chr3B.!!$R2 577
11 TraesCS6B01G200400 chr3B 478015427 478017172 1745 True 332.000000 532 95.1440 5194 5586 2 chr3B.!!$R6 392
12 TraesCS6B01G200400 chr3B 29845854 29847591 1737 True 328.500000 516 96.1350 5201 5586 2 chr3B.!!$R4 385
13 TraesCS6B01G200400 chr3B 191183875 191185603 1728 False 328.500000 516 95.2240 5194 5586 2 chr3B.!!$F2 392
14 TraesCS6B01G200400 chr3B 31262057 31263156 1099 True 313.500000 468 93.4375 3944 5193 2 chr3B.!!$R5 1249
15 TraesCS6B01G200400 chr2A 356711203 356712074 871 False 828.000000 828 84.0130 6969 7863 1 chr2A.!!$F1 894
16 TraesCS6B01G200400 chr5A 239402924 239403571 647 True 761.000000 761 88.0180 2657 3301 1 chr5A.!!$R1 644
17 TraesCS6B01G200400 chr1A 23017592 23018239 647 False 756.000000 756 87.8460 2657 3301 1 chr1A.!!$F1 644
18 TraesCS6B01G200400 chr1B 3870696 3871390 694 True 340.000000 340 76.2240 6969 7662 1 chr1B.!!$R1 693
19 TraesCS6B01G200400 chr7D 275780987 275781589 602 False 412.000000 412 79.3100 7247 7845 1 chr7D.!!$F1 598
20 TraesCS6B01G200400 chr2B 128380137 128381886 1749 True 322.000000 507 94.5625 5194 5586 2 chr2B.!!$R3 392
21 TraesCS6B01G200400 chr2B 636767711 636769115 1404 True 320.000000 488 92.9795 3944 5193 2 chr2B.!!$R4 1249
22 TraesCS6B01G200400 chr2B 717046383 717048212 1829 False 315.000000 459 92.5810 3930 5190 2 chr2B.!!$F3 1260
23 TraesCS6B01G200400 chr2B 733876346 733878089 1743 False 308.000000 499 92.6880 5194 5586 2 chr2B.!!$F4 392
24 TraesCS6B01G200400 chr2B 776405445 776406233 788 True 279.500000 438 92.8635 5194 5586 2 chr2B.!!$R5 392
25 TraesCS6B01G200400 chr4D 455312091 455312785 694 False 370.000000 370 76.9870 6967 7661 1 chr4D.!!$F1 694

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
246 247 0.107945 GGAGATATCCCTCGCATGCC 60.108 60.000 13.15 0.00 34.08 4.40 F
247 248 0.107945 GAGATATCCCTCGCATGCCC 60.108 60.000 13.15 0.00 0.00 5.36 F
362 363 0.107945 GGAGATATCCCTCGCATGCC 60.108 60.000 13.15 0.00 34.08 4.40 F
559 560 0.118144 AGAGCTCCCTTCAACTCCCT 59.882 55.000 10.93 0.00 0.00 4.20 F
632 633 0.249676 GAACCGGAAAGGAGGGAGTC 59.750 60.000 9.46 0.00 45.00 3.36 F
634 635 0.252742 ACCGGAAAGGAGGGAGTCAT 60.253 55.000 9.46 0.00 45.00 3.06 F
1484 3747 0.521242 GCGCGACATTAACTTGGCAG 60.521 55.000 12.10 0.00 0.00 4.85 F
1539 3802 1.514402 GCACGGCGATTACGTACTTAC 59.486 52.381 16.62 0.00 43.58 2.34 F
1642 3906 2.283966 CCTCCCCGGTCAGTCACT 60.284 66.667 0.00 0.00 0.00 3.41 F
3611 6151 1.734465 AGGCACACGTAGTACTCGTAC 59.266 52.381 16.38 10.82 41.61 3.67 F
4235 6816 0.325933 TCTCTTCGACCTACCCACGA 59.674 55.000 0.00 0.00 0.00 4.35 F
5657 10897 0.543410 TCCTCTGCTTCGGTTGGGTA 60.543 55.000 0.00 0.00 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1456 3711 0.169451 TAATGTCGCGCTCTGACGAA 59.831 50.000 5.56 0.00 40.47 3.85 R
1458 3713 0.294887 GTTAATGTCGCGCTCTGACG 59.705 55.000 5.56 0.00 39.22 4.35 R
1474 3737 2.073056 CACGTACATGCTGCCAAGTTA 58.927 47.619 0.00 0.00 0.00 2.24 R
1480 3743 2.324330 TGTGCACGTACATGCTGCC 61.324 57.895 15.74 3.87 46.28 4.85 R
1566 3829 3.953775 CACCAACCTCCCTGCGGT 61.954 66.667 0.00 0.00 35.97 5.68 R
1642 3906 4.493057 CGCTACGAATCGTACTGTTAGTCA 60.493 45.833 11.84 0.00 41.54 3.41 R
3340 5692 0.396435 ACAAGAACACATCTCCGCCA 59.604 50.000 0.00 0.00 37.42 5.69 R
3350 5883 3.300009 CTTGAATGGCGAACAAGAACAC 58.700 45.455 11.46 0.00 42.12 3.32 R
3637 6177 1.218316 GAAGTGCCGGACTGGGTAG 59.782 63.158 5.05 0.00 38.63 3.18 R
5316 10518 1.149627 GGTGTGCAGTACCCACCAA 59.850 57.895 16.35 0.00 46.33 3.67 R
5793 11044 0.939106 CTTTTCCCGCCGTTTTGCTG 60.939 55.000 0.00 0.00 0.00 4.41 R
7191 12515 0.601558 GTAGGTGAGGAAGCGTGTGA 59.398 55.000 0.00 0.00 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.519719 CAGCACCTCTAGCCAGACC 59.480 63.158 0.00 0.00 0.00 3.85
19 20 2.055042 AGCACCTCTAGCCAGACCG 61.055 63.158 0.00 0.00 0.00 4.79
20 21 3.082579 GCACCTCTAGCCAGACCGG 62.083 68.421 0.00 0.00 38.11 5.28
21 22 1.682684 CACCTCTAGCCAGACCGGT 60.683 63.158 6.92 6.92 36.97 5.28
22 23 1.682684 ACCTCTAGCCAGACCGGTG 60.683 63.158 14.63 0.00 36.97 4.94
23 24 1.682684 CCTCTAGCCAGACCGGTGT 60.683 63.158 14.63 4.35 36.97 4.16
24 25 0.395311 CCTCTAGCCAGACCGGTGTA 60.395 60.000 14.63 0.00 36.97 2.90
25 26 1.025812 CTCTAGCCAGACCGGTGTAG 58.974 60.000 14.63 0.62 36.97 2.74
26 27 0.395311 TCTAGCCAGACCGGTGTAGG 60.395 60.000 14.63 13.94 36.97 3.18
27 28 2.017559 CTAGCCAGACCGGTGTAGGC 62.018 65.000 26.94 26.94 42.92 3.93
28 29 4.814294 GCCAGACCGGTGTAGGCG 62.814 72.222 22.75 4.87 36.42 5.52
29 30 3.066190 CCAGACCGGTGTAGGCGA 61.066 66.667 14.63 0.00 33.69 5.54
30 31 2.642254 CCAGACCGGTGTAGGCGAA 61.642 63.158 14.63 0.00 33.69 4.70
31 32 1.153823 CAGACCGGTGTAGGCGAAG 60.154 63.158 14.63 0.00 33.69 3.79
32 33 1.303888 AGACCGGTGTAGGCGAAGA 60.304 57.895 14.63 0.00 33.69 2.87
33 34 1.153881 GACCGGTGTAGGCGAAGAC 60.154 63.158 14.63 0.00 33.69 3.01
34 35 1.870055 GACCGGTGTAGGCGAAGACA 61.870 60.000 14.63 0.00 39.87 3.41
35 36 1.153823 CCGGTGTAGGCGAAGACAG 60.154 63.158 0.00 0.00 39.87 3.51
36 37 1.153823 CGGTGTAGGCGAAGACAGG 60.154 63.158 0.00 0.00 39.87 4.00
37 38 1.218316 GGTGTAGGCGAAGACAGGG 59.782 63.158 0.00 0.00 39.87 4.45
38 39 1.448013 GTGTAGGCGAAGACAGGGC 60.448 63.158 0.00 0.00 39.87 5.19
39 40 2.202756 GTAGGCGAAGACAGGGCG 60.203 66.667 0.00 0.00 39.87 6.13
40 41 3.458163 TAGGCGAAGACAGGGCGG 61.458 66.667 0.00 0.00 39.87 6.13
57 58 2.125512 GCGGACAGCGGAGAACAT 60.126 61.111 0.00 0.00 35.41 2.71
58 59 1.141019 GCGGACAGCGGAGAACATA 59.859 57.895 0.00 0.00 35.41 2.29
59 60 1.146358 GCGGACAGCGGAGAACATAC 61.146 60.000 0.00 0.00 35.41 2.39
60 61 0.527817 CGGACAGCGGAGAACATACC 60.528 60.000 0.00 0.00 0.00 2.73
65 66 3.944123 CGGAGAACATACCGGGGA 58.056 61.111 6.32 0.00 44.59 4.81
66 67 1.740285 CGGAGAACATACCGGGGAG 59.260 63.158 6.32 0.00 44.59 4.30
67 68 1.745320 CGGAGAACATACCGGGGAGG 61.745 65.000 6.32 0.00 44.59 4.30
68 69 0.398098 GGAGAACATACCGGGGAGGA 60.398 60.000 6.32 0.00 45.00 3.71
69 70 1.041437 GAGAACATACCGGGGAGGAG 58.959 60.000 6.32 0.00 45.00 3.69
70 71 0.635009 AGAACATACCGGGGAGGAGA 59.365 55.000 6.32 0.00 45.00 3.71
71 72 1.007963 AGAACATACCGGGGAGGAGAA 59.992 52.381 6.32 0.00 45.00 2.87
72 73 1.413077 GAACATACCGGGGAGGAGAAG 59.587 57.143 6.32 0.00 45.00 2.85
73 74 0.398664 ACATACCGGGGAGGAGAAGG 60.399 60.000 6.32 0.00 45.00 3.46
74 75 1.459730 ATACCGGGGAGGAGAAGGC 60.460 63.158 6.32 0.00 45.00 4.35
75 76 1.962570 ATACCGGGGAGGAGAAGGCT 61.963 60.000 6.32 0.00 45.00 4.58
76 77 2.873557 TACCGGGGAGGAGAAGGCTG 62.874 65.000 6.32 0.00 45.00 4.85
77 78 2.685380 CGGGGAGGAGAAGGCTGT 60.685 66.667 0.00 0.00 0.00 4.40
78 79 2.993853 GGGGAGGAGAAGGCTGTG 59.006 66.667 0.00 0.00 0.00 3.66
79 80 1.613630 GGGGAGGAGAAGGCTGTGA 60.614 63.158 0.00 0.00 0.00 3.58
80 81 1.599576 GGGAGGAGAAGGCTGTGAC 59.400 63.158 0.00 0.00 0.00 3.67
81 82 1.216710 GGAGGAGAAGGCTGTGACG 59.783 63.158 0.00 0.00 0.00 4.35
82 83 1.251527 GGAGGAGAAGGCTGTGACGA 61.252 60.000 0.00 0.00 0.00 4.20
83 84 0.172352 GAGGAGAAGGCTGTGACGAG 59.828 60.000 0.00 0.00 0.00 4.18
84 85 0.540830 AGGAGAAGGCTGTGACGAGT 60.541 55.000 0.00 0.00 0.00 4.18
85 86 1.174783 GGAGAAGGCTGTGACGAGTA 58.825 55.000 0.00 0.00 0.00 2.59
86 87 1.135344 GGAGAAGGCTGTGACGAGTAC 60.135 57.143 0.00 0.00 0.00 2.73
87 88 1.813786 GAGAAGGCTGTGACGAGTACT 59.186 52.381 0.00 0.00 0.00 2.73
88 89 1.813786 AGAAGGCTGTGACGAGTACTC 59.186 52.381 13.18 13.18 0.00 2.59
89 90 1.813786 GAAGGCTGTGACGAGTACTCT 59.186 52.381 20.34 7.83 0.00 3.24
90 91 2.783609 AGGCTGTGACGAGTACTCTA 57.216 50.000 20.34 4.45 0.00 2.43
91 92 2.634600 AGGCTGTGACGAGTACTCTAG 58.365 52.381 20.34 8.63 0.00 2.43
92 93 1.671845 GGCTGTGACGAGTACTCTAGG 59.328 57.143 20.34 7.92 0.00 3.02
93 94 2.630158 GCTGTGACGAGTACTCTAGGA 58.370 52.381 20.34 0.00 0.00 2.94
94 95 2.610374 GCTGTGACGAGTACTCTAGGAG 59.390 54.545 20.34 10.45 35.52 3.69
95 96 3.679361 GCTGTGACGAGTACTCTAGGAGA 60.679 52.174 20.34 0.37 33.32 3.71
97 98 2.867975 GTGACGAGTACTCTAGGAGAGC 59.132 54.545 20.34 4.02 46.12 4.09
98 99 2.158928 TGACGAGTACTCTAGGAGAGCC 60.159 54.545 20.34 0.00 46.12 4.70
99 100 2.103601 GACGAGTACTCTAGGAGAGCCT 59.896 54.545 20.34 0.30 46.12 4.58
100 101 2.103601 ACGAGTACTCTAGGAGAGCCTC 59.896 54.545 20.34 8.14 46.12 4.70
101 102 2.762745 GAGTACTCTAGGAGAGCCTCG 58.237 57.143 15.91 0.00 46.12 4.63
102 103 1.202722 AGTACTCTAGGAGAGCCTCGC 60.203 57.143 3.36 0.00 46.12 5.03
103 104 0.108963 TACTCTAGGAGAGCCTCGCC 59.891 60.000 6.35 6.35 46.12 5.54
104 105 1.901464 CTCTAGGAGAGCCTCGCCC 60.901 68.421 11.19 4.50 45.54 6.13
105 106 3.291383 CTAGGAGAGCCTCGCCCG 61.291 72.222 11.19 0.00 45.54 6.13
106 107 4.896829 TAGGAGAGCCTCGCCCGG 62.897 72.222 11.19 0.00 45.54 5.73
179 180 4.388499 GTGGAGGCGGCGAGGAAA 62.388 66.667 12.98 0.00 0.00 3.13
180 181 4.388499 TGGAGGCGGCGAGGAAAC 62.388 66.667 12.98 0.00 0.00 2.78
190 191 3.045492 GAGGAAACCGCCGCGAAA 61.045 61.111 15.93 0.00 0.00 3.46
191 192 2.592287 AGGAAACCGCCGCGAAAA 60.592 55.556 15.93 0.00 0.00 2.29
192 193 2.427905 GGAAACCGCCGCGAAAAC 60.428 61.111 15.93 3.00 0.00 2.43
193 194 2.793759 GAAACCGCCGCGAAAACG 60.794 61.111 15.93 5.67 0.00 3.60
194 195 3.226058 GAAACCGCCGCGAAAACGA 62.226 57.895 15.93 0.00 34.06 3.85
195 196 3.231324 AAACCGCCGCGAAAACGAG 62.231 57.895 15.93 0.00 34.06 4.18
196 197 4.955774 ACCGCCGCGAAAACGAGT 62.956 61.111 15.93 0.00 34.06 4.18
197 198 4.130281 CCGCCGCGAAAACGAGTC 62.130 66.667 15.93 0.00 34.06 3.36
198 199 4.130281 CGCCGCGAAAACGAGTCC 62.130 66.667 8.23 0.00 34.06 3.85
199 200 3.785499 GCCGCGAAAACGAGTCCC 61.785 66.667 8.23 0.00 34.06 4.46
200 201 3.475774 CCGCGAAAACGAGTCCCG 61.476 66.667 8.23 0.00 45.44 5.14
201 202 2.429571 CGCGAAAACGAGTCCCGA 60.430 61.111 0.00 0.00 41.76 5.14
202 203 2.713894 CGCGAAAACGAGTCCCGAC 61.714 63.158 0.00 0.00 41.76 4.79
203 204 2.713894 GCGAAAACGAGTCCCGACG 61.714 63.158 0.00 0.00 41.76 5.12
204 205 2.713894 CGAAAACGAGTCCCGACGC 61.714 63.158 0.00 0.00 41.76 5.19
236 237 1.511768 GCCTACCGCGGAGATATCC 59.488 63.158 35.90 9.12 0.00 2.59
237 238 1.946475 GCCTACCGCGGAGATATCCC 61.946 65.000 35.90 7.39 0.00 3.85
238 239 0.323542 CCTACCGCGGAGATATCCCT 60.324 60.000 35.90 8.50 0.00 4.20
239 240 1.096416 CTACCGCGGAGATATCCCTC 58.904 60.000 35.90 0.00 0.00 4.30
240 241 0.675837 TACCGCGGAGATATCCCTCG 60.676 60.000 35.90 12.82 34.08 4.63
241 242 2.179517 CGCGGAGATATCCCTCGC 59.820 66.667 18.78 18.78 34.08 5.03
242 243 2.626780 CGCGGAGATATCCCTCGCA 61.627 63.158 24.37 0.00 34.67 5.10
243 244 1.893786 GCGGAGATATCCCTCGCAT 59.106 57.895 21.84 0.00 34.91 4.73
244 245 0.459237 GCGGAGATATCCCTCGCATG 60.459 60.000 21.84 0.00 34.91 4.06
245 246 0.459237 CGGAGATATCCCTCGCATGC 60.459 60.000 7.91 7.91 34.08 4.06
246 247 0.107945 GGAGATATCCCTCGCATGCC 60.108 60.000 13.15 0.00 34.08 4.40
247 248 0.107945 GAGATATCCCTCGCATGCCC 60.108 60.000 13.15 0.00 0.00 5.36
248 249 1.448540 GATATCCCTCGCATGCCCG 60.449 63.158 13.15 2.74 0.00 6.13
249 250 2.859273 GATATCCCTCGCATGCCCGG 62.859 65.000 13.15 12.42 0.00 5.73
295 296 4.388499 GTGGAGGCGGCGAGGAAA 62.388 66.667 12.98 0.00 0.00 3.13
296 297 4.388499 TGGAGGCGGCGAGGAAAC 62.388 66.667 12.98 0.00 0.00 2.78
306 307 3.045492 GAGGAAACCGCCGCGAAA 61.045 61.111 15.93 0.00 0.00 3.46
307 308 2.592287 AGGAAACCGCCGCGAAAA 60.592 55.556 15.93 0.00 0.00 2.29
308 309 2.427905 GGAAACCGCCGCGAAAAC 60.428 61.111 15.93 3.00 0.00 2.43
309 310 2.793759 GAAACCGCCGCGAAAACG 60.794 61.111 15.93 5.67 0.00 3.60
310 311 3.226058 GAAACCGCCGCGAAAACGA 62.226 57.895 15.93 0.00 34.06 3.85
311 312 3.231324 AAACCGCCGCGAAAACGAG 62.231 57.895 15.93 0.00 34.06 4.18
312 313 4.955774 ACCGCCGCGAAAACGAGT 62.956 61.111 15.93 0.00 34.06 4.18
313 314 4.130281 CCGCCGCGAAAACGAGTC 62.130 66.667 15.93 0.00 34.06 3.36
314 315 4.130281 CGCCGCGAAAACGAGTCC 62.130 66.667 8.23 0.00 34.06 3.85
315 316 3.785499 GCCGCGAAAACGAGTCCC 61.785 66.667 8.23 0.00 34.06 4.46
316 317 3.475774 CCGCGAAAACGAGTCCCG 61.476 66.667 8.23 0.00 45.44 5.14
317 318 2.429571 CGCGAAAACGAGTCCCGA 60.430 61.111 0.00 0.00 41.76 5.14
318 319 2.713894 CGCGAAAACGAGTCCCGAC 61.714 63.158 0.00 0.00 41.76 4.79
319 320 2.713894 GCGAAAACGAGTCCCGACG 61.714 63.158 0.00 0.00 41.76 5.12
320 321 2.713894 CGAAAACGAGTCCCGACGC 61.714 63.158 0.00 0.00 41.76 5.19
352 353 1.511768 GCCTACCGCGGAGATATCC 59.488 63.158 35.90 9.12 0.00 2.59
353 354 1.946475 GCCTACCGCGGAGATATCCC 61.946 65.000 35.90 7.39 0.00 3.85
354 355 0.323542 CCTACCGCGGAGATATCCCT 60.324 60.000 35.90 8.50 0.00 4.20
355 356 1.096416 CTACCGCGGAGATATCCCTC 58.904 60.000 35.90 0.00 0.00 4.30
356 357 0.675837 TACCGCGGAGATATCCCTCG 60.676 60.000 35.90 12.82 34.08 4.63
357 358 2.179517 CGCGGAGATATCCCTCGC 59.820 66.667 18.78 18.78 34.08 5.03
358 359 2.626780 CGCGGAGATATCCCTCGCA 61.627 63.158 24.37 0.00 34.67 5.10
359 360 1.893786 GCGGAGATATCCCTCGCAT 59.106 57.895 21.84 0.00 34.91 4.73
360 361 0.459237 GCGGAGATATCCCTCGCATG 60.459 60.000 21.84 0.00 34.91 4.06
361 362 0.459237 CGGAGATATCCCTCGCATGC 60.459 60.000 7.91 7.91 34.08 4.06
362 363 0.107945 GGAGATATCCCTCGCATGCC 60.108 60.000 13.15 0.00 34.08 4.40
363 364 0.107945 GAGATATCCCTCGCATGCCC 60.108 60.000 13.15 0.00 0.00 5.36
364 365 1.448540 GATATCCCTCGCATGCCCG 60.449 63.158 13.15 2.74 0.00 6.13
365 366 2.859273 GATATCCCTCGCATGCCCGG 62.859 65.000 13.15 12.42 0.00 5.73
398 399 4.717629 CGCGTCGAGGTTGGAGCA 62.718 66.667 7.01 0.00 0.00 4.26
399 400 2.811317 GCGTCGAGGTTGGAGCAG 60.811 66.667 7.01 0.00 0.00 4.24
400 401 2.125912 CGTCGAGGTTGGAGCAGG 60.126 66.667 0.00 0.00 0.00 4.85
401 402 2.435059 GTCGAGGTTGGAGCAGGC 60.435 66.667 0.00 0.00 0.00 4.85
402 403 2.922503 TCGAGGTTGGAGCAGGCA 60.923 61.111 0.00 0.00 0.00 4.75
403 404 2.435586 CGAGGTTGGAGCAGGCAG 60.436 66.667 0.00 0.00 0.00 4.85
404 405 2.749441 GAGGTTGGAGCAGGCAGC 60.749 66.667 0.00 0.00 46.19 5.25
442 443 4.410400 CAAGGGGAGCGGGGTGTC 62.410 72.222 0.00 0.00 0.00 3.67
467 468 2.109799 CCCCATGGCAGCGAGTAG 59.890 66.667 6.09 0.00 0.00 2.57
468 469 2.109799 CCCATGGCAGCGAGTAGG 59.890 66.667 6.09 0.00 0.00 3.18
469 470 2.590007 CCATGGCAGCGAGTAGGC 60.590 66.667 0.00 0.00 0.00 3.93
474 475 4.874977 GCAGCGAGTAGGCCGGTC 62.875 72.222 0.00 0.00 35.43 4.79
475 476 4.554363 CAGCGAGTAGGCCGGTCG 62.554 72.222 17.14 17.14 35.43 4.79
476 477 4.790962 AGCGAGTAGGCCGGTCGA 62.791 66.667 23.39 0.00 35.70 4.20
477 478 3.818787 GCGAGTAGGCCGGTCGAA 61.819 66.667 23.39 0.00 35.70 3.71
478 479 2.879907 CGAGTAGGCCGGTCGAAA 59.120 61.111 16.66 0.00 35.70 3.46
479 480 1.226603 CGAGTAGGCCGGTCGAAAG 60.227 63.158 16.66 0.00 35.70 2.62
480 481 1.141234 GAGTAGGCCGGTCGAAAGG 59.859 63.158 1.90 3.24 0.00 3.11
481 482 2.186125 GTAGGCCGGTCGAAAGGG 59.814 66.667 1.90 1.83 0.00 3.95
482 483 2.284112 TAGGCCGGTCGAAAGGGT 60.284 61.111 1.90 0.00 0.00 4.34
483 484 2.652095 TAGGCCGGTCGAAAGGGTG 61.652 63.158 1.90 0.00 0.00 4.61
531 532 2.202756 GCGGTGGAGTCGCCTAAG 60.203 66.667 0.00 0.00 46.55 2.18
532 533 2.202756 CGGTGGAGTCGCCTAAGC 60.203 66.667 0.00 0.00 41.26 3.09
533 534 2.711922 CGGTGGAGTCGCCTAAGCT 61.712 63.158 0.00 0.00 41.26 3.74
534 535 1.381928 CGGTGGAGTCGCCTAAGCTA 61.382 60.000 0.00 0.00 41.26 3.32
535 536 1.041437 GGTGGAGTCGCCTAAGCTAT 58.959 55.000 0.00 0.00 40.31 2.97
536 537 1.413077 GGTGGAGTCGCCTAAGCTATT 59.587 52.381 0.00 0.00 40.31 1.73
537 538 2.474816 GTGGAGTCGCCTAAGCTATTG 58.525 52.381 0.00 0.00 37.63 1.90
538 539 1.202533 TGGAGTCGCCTAAGCTATTGC 60.203 52.381 0.00 0.00 37.63 3.56
539 540 1.503294 GAGTCGCCTAAGCTATTGCC 58.497 55.000 0.00 0.00 40.80 4.52
540 541 0.830648 AGTCGCCTAAGCTATTGCCA 59.169 50.000 0.00 0.00 40.80 4.92
541 542 1.202580 AGTCGCCTAAGCTATTGCCAG 60.203 52.381 0.00 0.00 40.80 4.85
542 543 1.119684 TCGCCTAAGCTATTGCCAGA 58.880 50.000 0.00 0.00 40.80 3.86
543 544 1.069204 TCGCCTAAGCTATTGCCAGAG 59.931 52.381 0.00 0.00 40.80 3.35
544 545 1.233919 GCCTAAGCTATTGCCAGAGC 58.766 55.000 0.00 0.00 40.80 4.09
548 549 1.835693 AGCTATTGCCAGAGCTCCC 59.164 57.895 10.93 0.00 46.08 4.30
549 550 0.693767 AGCTATTGCCAGAGCTCCCT 60.694 55.000 10.93 0.00 46.08 4.20
550 551 0.182299 GCTATTGCCAGAGCTCCCTT 59.818 55.000 10.93 0.00 40.80 3.95
551 552 1.813477 GCTATTGCCAGAGCTCCCTTC 60.813 57.143 10.93 0.00 40.80 3.46
552 553 1.487976 CTATTGCCAGAGCTCCCTTCA 59.512 52.381 10.93 0.52 40.80 3.02
553 554 0.700564 ATTGCCAGAGCTCCCTTCAA 59.299 50.000 10.93 10.13 40.80 2.69
554 555 0.250901 TTGCCAGAGCTCCCTTCAAC 60.251 55.000 10.93 0.00 40.80 3.18
555 556 1.130054 TGCCAGAGCTCCCTTCAACT 61.130 55.000 10.93 0.00 40.80 3.16
556 557 0.392327 GCCAGAGCTCCCTTCAACTC 60.392 60.000 10.93 0.00 35.50 3.01
557 558 0.251634 CCAGAGCTCCCTTCAACTCC 59.748 60.000 10.93 0.00 0.00 3.85
558 559 0.251634 CAGAGCTCCCTTCAACTCCC 59.748 60.000 10.93 0.00 0.00 4.30
559 560 0.118144 AGAGCTCCCTTCAACTCCCT 59.882 55.000 10.93 0.00 0.00 4.20
560 561 1.362932 AGAGCTCCCTTCAACTCCCTA 59.637 52.381 10.93 0.00 0.00 3.53
561 562 1.760029 GAGCTCCCTTCAACTCCCTAG 59.240 57.143 0.87 0.00 0.00 3.02
562 563 0.833949 GCTCCCTTCAACTCCCTAGG 59.166 60.000 0.06 0.06 0.00 3.02
563 564 1.622725 GCTCCCTTCAACTCCCTAGGA 60.623 57.143 11.48 0.00 0.00 2.94
564 565 2.961977 GCTCCCTTCAACTCCCTAGGAT 60.962 54.545 11.48 0.00 0.00 3.24
565 566 3.388913 CTCCCTTCAACTCCCTAGGATT 58.611 50.000 11.48 0.00 0.00 3.01
566 567 3.385115 TCCCTTCAACTCCCTAGGATTC 58.615 50.000 11.48 0.00 0.00 2.52
567 568 3.115390 CCCTTCAACTCCCTAGGATTCA 58.885 50.000 11.48 0.00 0.00 2.57
568 569 3.135530 CCCTTCAACTCCCTAGGATTCAG 59.864 52.174 11.48 2.89 0.00 3.02
569 570 4.033709 CCTTCAACTCCCTAGGATTCAGA 58.966 47.826 11.48 0.00 0.00 3.27
570 571 4.141824 CCTTCAACTCCCTAGGATTCAGAC 60.142 50.000 11.48 0.00 0.00 3.51
571 572 4.338795 TCAACTCCCTAGGATTCAGACT 57.661 45.455 11.48 0.00 0.00 3.24
572 573 4.689062 TCAACTCCCTAGGATTCAGACTT 58.311 43.478 11.48 0.00 0.00 3.01
573 574 5.094387 TCAACTCCCTAGGATTCAGACTTT 58.906 41.667 11.48 0.00 0.00 2.66
574 575 5.548056 TCAACTCCCTAGGATTCAGACTTTT 59.452 40.000 11.48 0.00 0.00 2.27
575 576 5.428184 ACTCCCTAGGATTCAGACTTTTG 57.572 43.478 11.48 0.00 0.00 2.44
576 577 4.195416 CTCCCTAGGATTCAGACTTTTGC 58.805 47.826 11.48 0.00 0.00 3.68
577 578 3.587061 TCCCTAGGATTCAGACTTTTGCA 59.413 43.478 11.48 0.00 0.00 4.08
578 579 3.944015 CCCTAGGATTCAGACTTTTGCAG 59.056 47.826 11.48 0.00 0.00 4.41
579 580 4.566488 CCCTAGGATTCAGACTTTTGCAGT 60.566 45.833 11.48 0.00 39.07 4.40
580 581 5.338381 CCCTAGGATTCAGACTTTTGCAGTA 60.338 44.000 11.48 0.00 35.01 2.74
581 582 5.814705 CCTAGGATTCAGACTTTTGCAGTAG 59.185 44.000 1.05 0.00 35.01 2.57
582 583 5.234466 AGGATTCAGACTTTTGCAGTAGT 57.766 39.130 2.76 2.76 35.01 2.73
583 584 6.360370 AGGATTCAGACTTTTGCAGTAGTA 57.640 37.500 3.11 0.00 35.01 1.82
584 585 6.402222 AGGATTCAGACTTTTGCAGTAGTAG 58.598 40.000 3.11 0.86 35.01 2.57
585 586 6.014156 AGGATTCAGACTTTTGCAGTAGTAGT 60.014 38.462 3.11 0.00 35.01 2.73
586 587 6.651225 GGATTCAGACTTTTGCAGTAGTAGTT 59.349 38.462 3.11 0.00 35.01 2.24
587 588 7.817962 GGATTCAGACTTTTGCAGTAGTAGTTA 59.182 37.037 3.11 0.00 35.01 2.24
588 589 8.764524 ATTCAGACTTTTGCAGTAGTAGTTAG 57.235 34.615 3.11 0.00 35.01 2.34
589 590 7.520451 TCAGACTTTTGCAGTAGTAGTTAGA 57.480 36.000 3.11 0.00 35.01 2.10
590 591 7.594714 TCAGACTTTTGCAGTAGTAGTTAGAG 58.405 38.462 3.11 0.00 35.01 2.43
591 592 7.447545 TCAGACTTTTGCAGTAGTAGTTAGAGA 59.552 37.037 3.11 0.00 35.01 3.10
592 593 7.753132 CAGACTTTTGCAGTAGTAGTTAGAGAG 59.247 40.741 3.11 0.00 35.01 3.20
593 594 7.666388 AGACTTTTGCAGTAGTAGTTAGAGAGA 59.334 37.037 3.11 0.00 35.01 3.10
594 595 8.356000 ACTTTTGCAGTAGTAGTTAGAGAGAT 57.644 34.615 1.33 0.00 31.97 2.75
595 596 9.463902 ACTTTTGCAGTAGTAGTTAGAGAGATA 57.536 33.333 1.33 0.00 31.97 1.98
599 600 9.628500 TTGCAGTAGTAGTTAGAGAGATATTCA 57.372 33.333 0.00 0.00 0.00 2.57
600 601 9.628500 TGCAGTAGTAGTTAGAGAGATATTCAA 57.372 33.333 0.00 0.00 0.00 2.69
604 605 9.881529 GTAGTAGTTAGAGAGATATTCAAACCG 57.118 37.037 0.00 0.00 0.00 4.44
605 606 8.749026 AGTAGTTAGAGAGATATTCAAACCGA 57.251 34.615 0.00 0.00 0.00 4.69
606 607 9.186837 AGTAGTTAGAGAGATATTCAAACCGAA 57.813 33.333 0.00 0.00 38.22 4.30
607 608 9.453325 GTAGTTAGAGAGATATTCAAACCGAAG 57.547 37.037 0.00 0.00 36.95 3.79
608 609 6.981559 AGTTAGAGAGATATTCAAACCGAAGC 59.018 38.462 0.00 0.00 36.95 3.86
609 610 5.344743 AGAGAGATATTCAAACCGAAGCA 57.655 39.130 0.00 0.00 36.95 3.91
610 611 5.923204 AGAGAGATATTCAAACCGAAGCAT 58.077 37.500 0.00 0.00 36.95 3.79
611 612 7.055667 AGAGAGATATTCAAACCGAAGCATA 57.944 36.000 0.00 0.00 36.95 3.14
612 613 7.675062 AGAGAGATATTCAAACCGAAGCATAT 58.325 34.615 0.00 0.00 36.95 1.78
613 614 7.601886 AGAGAGATATTCAAACCGAAGCATATG 59.398 37.037 0.00 0.00 36.95 1.78
614 615 7.445121 AGAGATATTCAAACCGAAGCATATGA 58.555 34.615 6.97 0.00 36.95 2.15
615 616 7.933577 AGAGATATTCAAACCGAAGCATATGAA 59.066 33.333 6.97 0.00 36.95 2.57
616 617 7.865707 AGATATTCAAACCGAAGCATATGAAC 58.134 34.615 6.97 0.00 36.95 3.18
617 618 4.695217 TTCAAACCGAAGCATATGAACC 57.305 40.909 6.97 0.00 0.00 3.62
618 619 2.675844 TCAAACCGAAGCATATGAACCG 59.324 45.455 6.97 5.56 0.00 4.44
619 620 1.663695 AACCGAAGCATATGAACCGG 58.336 50.000 20.87 20.87 42.30 5.28
620 621 0.828022 ACCGAAGCATATGAACCGGA 59.172 50.000 26.01 0.00 40.10 5.14
621 622 1.208535 ACCGAAGCATATGAACCGGAA 59.791 47.619 26.01 0.00 40.10 4.30
622 623 2.285083 CCGAAGCATATGAACCGGAAA 58.715 47.619 9.46 0.00 39.31 3.13
623 624 2.287915 CCGAAGCATATGAACCGGAAAG 59.712 50.000 9.46 0.00 39.31 2.62
625 626 3.541632 GAAGCATATGAACCGGAAAGGA 58.458 45.455 9.46 0.00 45.00 3.36
626 627 3.199880 AGCATATGAACCGGAAAGGAG 57.800 47.619 9.46 0.00 45.00 3.69
627 628 2.158755 AGCATATGAACCGGAAAGGAGG 60.159 50.000 9.46 0.00 45.00 4.30
628 629 2.851195 CATATGAACCGGAAAGGAGGG 58.149 52.381 9.46 0.00 45.00 4.30
629 630 2.257391 TATGAACCGGAAAGGAGGGA 57.743 50.000 9.46 0.00 45.00 4.20
630 631 0.912486 ATGAACCGGAAAGGAGGGAG 59.088 55.000 9.46 0.00 45.00 4.30
631 632 0.473117 TGAACCGGAAAGGAGGGAGT 60.473 55.000 9.46 0.00 45.00 3.85
632 633 0.249676 GAACCGGAAAGGAGGGAGTC 59.750 60.000 9.46 0.00 45.00 3.36
633 634 0.473117 AACCGGAAAGGAGGGAGTCA 60.473 55.000 9.46 0.00 45.00 3.41
634 635 0.252742 ACCGGAAAGGAGGGAGTCAT 60.253 55.000 9.46 0.00 45.00 3.06
635 636 0.912486 CCGGAAAGGAGGGAGTCATT 59.088 55.000 0.00 0.00 45.00 2.57
636 637 1.134371 CCGGAAAGGAGGGAGTCATTC 60.134 57.143 0.00 0.00 45.00 2.67
637 638 1.834263 CGGAAAGGAGGGAGTCATTCT 59.166 52.381 0.00 0.00 0.00 2.40
638 639 2.237392 CGGAAAGGAGGGAGTCATTCTT 59.763 50.000 0.00 0.00 0.00 2.52
639 640 3.615155 GGAAAGGAGGGAGTCATTCTTG 58.385 50.000 0.00 0.00 0.00 3.02
640 641 3.615155 GAAAGGAGGGAGTCATTCTTGG 58.385 50.000 0.00 0.00 0.00 3.61
641 642 2.350863 AGGAGGGAGTCATTCTTGGT 57.649 50.000 0.00 0.00 0.00 3.67
642 643 3.491766 AGGAGGGAGTCATTCTTGGTA 57.508 47.619 0.00 0.00 0.00 3.25
643 644 3.379452 AGGAGGGAGTCATTCTTGGTAG 58.621 50.000 0.00 0.00 0.00 3.18
644 645 2.158885 GGAGGGAGTCATTCTTGGTAGC 60.159 54.545 0.00 0.00 0.00 3.58
645 646 1.840635 AGGGAGTCATTCTTGGTAGCC 59.159 52.381 0.00 0.00 0.00 3.93
646 647 1.559682 GGGAGTCATTCTTGGTAGCCA 59.440 52.381 0.00 0.00 0.00 4.75
647 648 2.026262 GGGAGTCATTCTTGGTAGCCAA 60.026 50.000 0.39 0.39 41.69 4.52
648 649 3.561313 GGGAGTCATTCTTGGTAGCCAAA 60.561 47.826 2.07 0.00 43.44 3.28
649 650 3.440522 GGAGTCATTCTTGGTAGCCAAAC 59.559 47.826 2.07 0.00 43.44 2.93
650 651 4.327680 GAGTCATTCTTGGTAGCCAAACT 58.672 43.478 2.07 2.50 43.44 2.66
651 652 4.729868 AGTCATTCTTGGTAGCCAAACTT 58.270 39.130 2.07 0.00 43.44 2.66
652 653 4.762251 AGTCATTCTTGGTAGCCAAACTTC 59.238 41.667 2.07 0.00 43.44 3.01
653 654 4.762251 GTCATTCTTGGTAGCCAAACTTCT 59.238 41.667 2.07 0.00 43.44 2.85
654 655 5.003804 TCATTCTTGGTAGCCAAACTTCTC 58.996 41.667 2.07 0.00 43.44 2.87
655 656 4.706842 TTCTTGGTAGCCAAACTTCTCT 57.293 40.909 2.07 0.00 43.44 3.10
656 657 4.008074 TCTTGGTAGCCAAACTTCTCTG 57.992 45.455 2.07 0.00 43.44 3.35
657 658 2.185004 TGGTAGCCAAACTTCTCTGC 57.815 50.000 0.00 0.00 0.00 4.26
658 659 1.419762 TGGTAGCCAAACTTCTCTGCA 59.580 47.619 0.00 0.00 0.00 4.41
659 660 2.158682 TGGTAGCCAAACTTCTCTGCAA 60.159 45.455 0.00 0.00 0.00 4.08
660 661 2.884639 GGTAGCCAAACTTCTCTGCAAA 59.115 45.455 0.00 0.00 0.00 3.68
661 662 3.507622 GGTAGCCAAACTTCTCTGCAAAT 59.492 43.478 0.00 0.00 0.00 2.32
662 663 3.655276 AGCCAAACTTCTCTGCAAATG 57.345 42.857 0.00 0.00 0.00 2.32
663 664 2.298163 AGCCAAACTTCTCTGCAAATGG 59.702 45.455 0.00 0.00 0.00 3.16
664 665 2.036346 GCCAAACTTCTCTGCAAATGGT 59.964 45.455 0.00 0.00 0.00 3.55
665 666 3.645884 CCAAACTTCTCTGCAAATGGTG 58.354 45.455 0.00 0.00 0.00 4.17
674 675 3.736100 CAAATGGTGCGCTGGCGA 61.736 61.111 19.31 1.28 44.10 5.54
675 676 2.751436 AAATGGTGCGCTGGCGAT 60.751 55.556 19.31 0.05 44.10 4.58
676 677 2.342650 AAATGGTGCGCTGGCGATT 61.343 52.632 19.31 6.49 44.10 3.34
677 678 2.546645 AAATGGTGCGCTGGCGATTG 62.547 55.000 19.31 0.00 44.10 2.67
678 679 3.974835 ATGGTGCGCTGGCGATTGA 62.975 57.895 19.31 0.00 44.10 2.57
679 680 3.430862 GGTGCGCTGGCGATTGAA 61.431 61.111 19.31 0.00 44.10 2.69
680 681 2.560861 GTGCGCTGGCGATTGAAA 59.439 55.556 19.31 0.00 44.10 2.69
681 682 1.081509 GTGCGCTGGCGATTGAAAA 60.082 52.632 19.31 0.00 44.10 2.29
682 683 1.081509 TGCGCTGGCGATTGAAAAC 60.082 52.632 19.31 0.00 44.10 2.43
683 684 1.081509 GCGCTGGCGATTGAAAACA 60.082 52.632 19.31 0.00 42.83 2.83
684 685 1.337110 GCGCTGGCGATTGAAAACAC 61.337 55.000 19.31 0.00 42.83 3.32
685 686 1.059657 CGCTGGCGATTGAAAACACG 61.060 55.000 9.51 0.00 42.83 4.49
689 690 2.054008 GCGATTGAAAACACGCTGC 58.946 52.632 0.00 0.00 46.14 5.25
690 691 0.660005 GCGATTGAAAACACGCTGCA 60.660 50.000 0.00 0.00 46.14 4.41
691 692 1.044725 CGATTGAAAACACGCTGCAC 58.955 50.000 0.00 0.00 0.00 4.57
692 693 1.596709 CGATTGAAAACACGCTGCACA 60.597 47.619 0.00 0.00 0.00 4.57
693 694 2.458951 GATTGAAAACACGCTGCACAA 58.541 42.857 0.00 0.00 0.00 3.33
694 695 1.906757 TTGAAAACACGCTGCACAAG 58.093 45.000 0.00 0.00 0.00 3.16
695 696 1.090728 TGAAAACACGCTGCACAAGA 58.909 45.000 0.00 0.00 0.00 3.02
696 697 1.675483 TGAAAACACGCTGCACAAGAT 59.325 42.857 0.00 0.00 0.00 2.40
697 698 2.046313 GAAAACACGCTGCACAAGATG 58.954 47.619 0.00 0.00 0.00 2.90
698 699 1.024271 AAACACGCTGCACAAGATGT 58.976 45.000 0.00 0.00 0.00 3.06
703 704 3.066064 ACACGCTGCACAAGATGTTTAAA 59.934 39.130 0.00 0.00 0.00 1.52
746 747 7.572759 GCACTTGCAAGTAAAGCGATATAATA 58.427 34.615 30.67 0.00 41.59 0.98
791 792 2.775960 TCAATCCTCCTCTGCATGACAT 59.224 45.455 0.00 0.00 0.00 3.06
819 820 3.857521 TACAGTTCCCACCGCCCCT 62.858 63.158 0.00 0.00 0.00 4.79
997 3252 3.109612 CTGCTGATGCTTCCGCTGC 62.110 63.158 15.30 7.13 40.48 5.25
1383 3638 3.970610 CCGGTAGTTCGTATCGTAATGTG 59.029 47.826 0.00 0.00 32.93 3.21
1424 3679 2.017049 CCTGGTTACAATAGCAGCACC 58.983 52.381 0.00 0.00 41.20 5.01
1430 3685 2.029838 ACAATAGCAGCACCACTAGC 57.970 50.000 0.00 0.00 0.00 3.42
1442 3697 1.135083 ACCACTAGCGATTTCGTGAGG 60.135 52.381 1.55 3.93 42.22 3.86
1456 3711 3.742385 TCGTGAGGTTTTCCGGTAAATT 58.258 40.909 9.62 1.68 46.35 1.82
1458 3713 4.213906 TCGTGAGGTTTTCCGGTAAATTTC 59.786 41.667 9.62 10.48 46.35 2.17
1474 3737 0.666274 TTTCGTCAGAGCGCGACATT 60.666 50.000 12.10 0.00 36.82 2.71
1480 3743 1.992667 TCAGAGCGCGACATTAACTTG 59.007 47.619 12.10 0.00 0.00 3.16
1483 3746 0.953471 AGCGCGACATTAACTTGGCA 60.953 50.000 12.10 0.00 0.00 4.92
1484 3747 0.521242 GCGCGACATTAACTTGGCAG 60.521 55.000 12.10 0.00 0.00 4.85
1539 3802 1.514402 GCACGGCGATTACGTACTTAC 59.486 52.381 16.62 0.00 43.58 2.34
1566 3829 2.640346 TCGTTACTCATTACAGCGCA 57.360 45.000 11.47 0.00 0.00 6.09
1642 3906 2.283966 CCTCCCCGGTCAGTCACT 60.284 66.667 0.00 0.00 0.00 3.41
1983 4254 3.768215 TGCATGCACCCATTTATCTTTGA 59.232 39.130 18.46 0.00 0.00 2.69
3340 5692 5.512749 CCTGCTGGAGTATGCATTTCTAGAT 60.513 44.000 20.91 0.00 34.26 1.98
3350 5883 2.740981 GCATTTCTAGATGGCGGAGATG 59.259 50.000 0.00 0.00 0.00 2.90
3506 6046 4.083862 GAGGCGGAGTGTGGGGAC 62.084 72.222 0.00 0.00 0.00 4.46
3578 6118 2.354305 GCGTCGCCGGTATGTAGG 60.354 66.667 5.75 0.00 33.68 3.18
3607 6147 3.005554 TGAGTAGGCACACGTAGTACTC 58.994 50.000 0.00 11.89 41.61 2.59
3611 6151 1.734465 AGGCACACGTAGTACTCGTAC 59.266 52.381 16.38 10.82 41.61 3.67
3661 6201 1.068333 CCAGTCCGGCACTTCATTTTG 60.068 52.381 0.00 0.00 30.26 2.44
3688 6256 4.458708 CACTAGCTTTTGTTCTCGCTTTC 58.541 43.478 0.00 0.00 34.14 2.62
3709 6277 1.518325 CCGTATCAACCACACTTGCA 58.482 50.000 0.00 0.00 0.00 4.08
3710 6278 2.083774 CCGTATCAACCACACTTGCAT 58.916 47.619 0.00 0.00 0.00 3.96
3711 6279 2.159531 CCGTATCAACCACACTTGCATG 60.160 50.000 0.00 0.00 0.00 4.06
3712 6280 2.728846 CGTATCAACCACACTTGCATGC 60.729 50.000 11.82 11.82 0.00 4.06
3729 6298 3.184986 GCATGCTTGAAATTGTGACAACC 59.815 43.478 11.37 0.00 0.00 3.77
3836 6405 3.216800 TCCATGTGATGCATTAAGCTCC 58.783 45.455 0.00 0.00 45.94 4.70
3980 6549 0.898326 GACCCCATTTTGTCCGGCTT 60.898 55.000 0.00 0.00 0.00 4.35
4000 6569 2.431954 TGTCCGTTTGGGGTAAAACA 57.568 45.000 1.28 0.00 39.53 2.83
4067 6636 2.353406 CCGTTTTATGTCCGTCTGACCT 60.353 50.000 1.55 0.00 43.78 3.85
4210 6791 2.556336 CCACCACTCTCTCTCTCTTCCA 60.556 54.545 0.00 0.00 0.00 3.53
4221 6802 6.953520 TCTCTCTCTCTTCCATTTTCTCTCTT 59.046 38.462 0.00 0.00 0.00 2.85
4235 6816 0.325933 TCTCTTCGACCTACCCACGA 59.674 55.000 0.00 0.00 0.00 4.35
4239 6820 1.203994 CTTCGACCTACCCACGAACAT 59.796 52.381 0.00 0.00 40.26 2.71
5156 8995 1.300931 CAGGCGGATATGTCACCCG 60.301 63.158 0.00 0.00 45.51 5.28
5178 9017 2.504367 GACATAATATGGGGTGCGCTT 58.496 47.619 9.73 0.00 33.60 4.68
5196 9035 4.465512 GCGCGTTGGGCACATCAG 62.466 66.667 8.43 0.00 43.84 2.90
5241 9084 4.003519 GCATAGTCTGCCGTTACAAAAG 57.996 45.455 0.00 0.00 45.66 2.27
5316 10518 2.047560 GGGCGGCGAGTAGTTGTT 60.048 61.111 12.98 0.00 0.00 2.83
5593 10807 4.452733 CGGTTCCGCCCTCCACTC 62.453 72.222 0.00 0.00 0.00 3.51
5595 10809 4.452733 GTTCCGCCCTCCACTCGG 62.453 72.222 0.00 0.00 44.16 4.63
5601 10815 4.796231 CCCTCCACTCGGCGTTCG 62.796 72.222 6.85 0.00 40.90 3.95
5657 10897 0.543410 TCCTCTGCTTCGGTTGGGTA 60.543 55.000 0.00 0.00 0.00 3.69
5788 11039 2.368875 AGCGGGAGAGAAGTGAGAAAAA 59.631 45.455 0.00 0.00 0.00 1.94
5789 11040 2.739379 GCGGGAGAGAAGTGAGAAAAAG 59.261 50.000 0.00 0.00 0.00 2.27
5790 11041 2.739379 CGGGAGAGAAGTGAGAAAAAGC 59.261 50.000 0.00 0.00 0.00 3.51
5792 11043 2.739379 GGAGAGAAGTGAGAAAAAGCGG 59.261 50.000 0.00 0.00 0.00 5.52
5793 11044 2.147150 AGAGAAGTGAGAAAAAGCGGC 58.853 47.619 0.00 0.00 0.00 6.53
5795 11046 1.876156 AGAAGTGAGAAAAAGCGGCAG 59.124 47.619 1.45 0.00 0.00 4.85
5834 11085 4.988716 TCGGGTCGCCTCCAGTGT 62.989 66.667 0.00 0.00 0.00 3.55
5837 11088 4.394712 GGTCGCCTCCAGTGTGGG 62.395 72.222 0.00 0.00 38.32 4.61
5861 11112 3.461129 CGCCTTTTTCGCTTGCGC 61.461 61.111 10.38 0.00 38.69 6.09
5863 11114 2.334653 CCTTTTTCGCTTGCGCCA 59.665 55.556 4.18 0.00 0.00 5.69
5868 11119 4.687215 TTCGCTTGCGCCAGCTCT 62.687 61.111 28.24 0.00 45.42 4.09
5931 11182 3.668386 CCAGTTTTGGTCCGAGCC 58.332 61.111 0.00 0.00 39.79 4.70
5952 11203 2.025898 GGTGAAAAACGGGTTTCTGGA 58.974 47.619 12.52 0.00 38.17 3.86
5956 11207 1.170290 AAAACGGGTTTCTGGAGGCG 61.170 55.000 0.00 0.00 31.45 5.52
5957 11208 4.699522 ACGGGTTTCTGGAGGCGC 62.700 66.667 0.00 0.00 0.00 6.53
5959 11210 4.388499 GGGTTTCTGGAGGCGCGA 62.388 66.667 12.10 0.00 0.00 5.87
5960 11211 3.119096 GGTTTCTGGAGGCGCGAC 61.119 66.667 12.10 7.34 0.00 5.19
5961 11212 2.048127 GTTTCTGGAGGCGCGACT 60.048 61.111 18.34 18.34 0.00 4.18
5962 11213 2.048222 TTTCTGGAGGCGCGACTG 60.048 61.111 25.24 4.88 0.00 3.51
5963 11214 3.589654 TTTCTGGAGGCGCGACTGG 62.590 63.158 25.24 9.92 0.00 4.00
5972 11223 2.983592 CGCGACTGGGGCCTTTTT 60.984 61.111 0.00 0.00 0.00 1.94
6005 11256 2.203070 CGAAATCGCCTGGGGAGG 60.203 66.667 18.77 4.81 0.00 4.30
6006 11257 2.193248 GAAATCGCCTGGGGAGGG 59.807 66.667 18.77 0.00 0.00 4.30
6007 11258 4.129148 AAATCGCCTGGGGAGGGC 62.129 66.667 18.77 0.00 45.57 5.19
6013 11264 4.052518 CCTGGGGAGGGCCTGTTG 62.053 72.222 12.95 0.00 0.00 3.33
6014 11265 4.052518 CTGGGGAGGGCCTGTTGG 62.053 72.222 12.95 0.00 0.00 3.77
6173 11453 0.175989 GACAAGCTCGTCCCCTTAGG 59.824 60.000 0.00 0.00 0.00 2.69
6196 11476 1.198094 TGATCCCGCTGTGGAAGGAA 61.198 55.000 9.25 0.00 42.00 3.36
6214 11494 4.949121 AGGAAGTGGAGTACTACAAGGAT 58.051 43.478 10.06 0.00 39.18 3.24
6418 11698 0.179097 GCTTCCTGTCGGAGATCCAC 60.179 60.000 0.00 0.00 41.25 4.02
6550 11830 1.571773 GGGTGGCCAGGGAGTACAAT 61.572 60.000 5.11 0.00 0.00 2.71
6757 12037 4.552365 CCCATGACCTGCGCCGAT 62.552 66.667 4.18 0.00 0.00 4.18
6956 12237 1.662044 GCATGGGGCGGATTCAATC 59.338 57.895 0.00 0.00 0.00 2.67
6981 12262 2.892334 GAACTTGTCGCGCCTGCAA 61.892 57.895 0.00 3.68 42.97 4.08
6991 12272 1.443194 CGCCTGCAAATGACAGCAC 60.443 57.895 0.00 0.00 36.62 4.40
6998 12279 1.532868 GCAAATGACAGCACTTCGACT 59.467 47.619 0.00 0.00 0.00 4.18
7071 12382 4.453454 ACCCTGCGTGGTGATCTA 57.547 55.556 0.00 0.00 37.20 1.98
7142 12455 3.560636 AGCCAGCTTTATGTACCGAAT 57.439 42.857 0.00 0.00 0.00 3.34
7157 12471 2.064762 CCGAATGGAGAATGATCGAGC 58.935 52.381 0.00 0.00 37.49 5.03
7191 12515 8.934023 AGAAATTAGATCGAACTATCTCCTCT 57.066 34.615 2.99 0.00 37.41 3.69
7193 12517 8.698973 AAATTAGATCGAACTATCTCCTCTCA 57.301 34.615 2.99 0.00 37.41 3.27
7195 12519 5.042463 AGATCGAACTATCTCCTCTCACA 57.958 43.478 0.00 0.00 30.09 3.58
7196 12520 4.819630 AGATCGAACTATCTCCTCTCACAC 59.180 45.833 0.00 0.00 30.09 3.82
7197 12521 2.937149 TCGAACTATCTCCTCTCACACG 59.063 50.000 0.00 0.00 0.00 4.49
7198 12522 2.539953 CGAACTATCTCCTCTCACACGC 60.540 54.545 0.00 0.00 0.00 5.34
7199 12523 2.428544 ACTATCTCCTCTCACACGCT 57.571 50.000 0.00 0.00 0.00 5.07
7230 12559 1.598856 CCCCTTCTCTCTCCCTCCCT 61.599 65.000 0.00 0.00 0.00 4.20
7337 12672 1.141254 TCTCTTACCCTCTCGATCGCT 59.859 52.381 11.09 0.00 0.00 4.93
7358 12694 1.279846 GGTAAAATCCACCGGGTCAGA 59.720 52.381 6.32 0.00 34.93 3.27
7366 12702 3.842923 CCGGGTCAGATGCGAGCT 61.843 66.667 0.00 0.00 33.84 4.09
7392 12728 2.962253 GAGCTCGCCCGAAATCCG 60.962 66.667 0.00 0.00 38.18 4.18
7393 12729 3.426117 GAGCTCGCCCGAAATCCGA 62.426 63.158 0.00 0.00 41.76 4.55
7513 12855 5.023533 AGCTACAGAACTTGTTCAAGACA 57.976 39.130 17.75 0.00 41.29 3.41
7522 12864 3.181465 ACTTGTTCAAGACAGTCATCCGT 60.181 43.478 17.75 0.00 39.94 4.69
7525 12867 1.530323 TCAAGACAGTCATCCGTCGA 58.470 50.000 2.66 0.00 37.23 4.20
7567 12909 2.047655 GATGAACGGCACCGGACA 60.048 61.111 9.46 12.76 44.69 4.02
7716 13058 3.530260 GGGCGCCATGTCCCATTG 61.530 66.667 30.85 0.00 42.18 2.82
7720 13062 2.484062 CGCCATGTCCCATTGAGCC 61.484 63.158 0.00 0.00 0.00 4.70
7744 13086 1.004440 GGACTCCTCCACACACAGC 60.004 63.158 0.00 0.00 36.42 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.519719 GGTCTGGCTAGAGGTGCTG 59.480 63.158 0.00 0.00 32.48 4.41
1 2 2.055042 CGGTCTGGCTAGAGGTGCT 61.055 63.158 0.00 0.00 32.48 4.40
2 3 2.496817 CGGTCTGGCTAGAGGTGC 59.503 66.667 0.00 0.00 32.48 5.01
3 4 1.682684 ACCGGTCTGGCTAGAGGTG 60.683 63.158 9.84 0.00 43.94 4.00
5 6 0.395311 TACACCGGTCTGGCTAGAGG 60.395 60.000 2.59 1.41 43.94 3.69
6 7 1.025812 CTACACCGGTCTGGCTAGAG 58.974 60.000 2.59 0.00 43.94 2.43
7 8 0.395311 CCTACACCGGTCTGGCTAGA 60.395 60.000 2.59 0.00 43.94 2.43
8 9 2.017559 GCCTACACCGGTCTGGCTAG 62.018 65.000 25.95 9.13 43.94 3.42
9 10 2.056223 GCCTACACCGGTCTGGCTA 61.056 63.158 25.95 4.18 43.94 3.93
10 11 3.391382 GCCTACACCGGTCTGGCT 61.391 66.667 25.95 3.30 43.94 4.75
11 12 4.814294 CGCCTACACCGGTCTGGC 62.814 72.222 24.33 24.33 43.94 4.85
12 13 2.558554 CTTCGCCTACACCGGTCTGG 62.559 65.000 2.59 8.54 46.41 3.86
13 14 1.153823 CTTCGCCTACACCGGTCTG 60.154 63.158 2.59 0.00 0.00 3.51
14 15 1.303888 TCTTCGCCTACACCGGTCT 60.304 57.895 2.59 0.00 0.00 3.85
15 16 1.153881 GTCTTCGCCTACACCGGTC 60.154 63.158 2.59 0.00 0.00 4.79
16 17 1.874345 CTGTCTTCGCCTACACCGGT 61.874 60.000 0.00 0.00 0.00 5.28
17 18 1.153823 CTGTCTTCGCCTACACCGG 60.154 63.158 0.00 0.00 0.00 5.28
18 19 1.153823 CCTGTCTTCGCCTACACCG 60.154 63.158 0.00 0.00 0.00 4.94
19 20 1.218316 CCCTGTCTTCGCCTACACC 59.782 63.158 0.00 0.00 0.00 4.16
20 21 1.448013 GCCCTGTCTTCGCCTACAC 60.448 63.158 0.00 0.00 0.00 2.90
21 22 2.978824 GCCCTGTCTTCGCCTACA 59.021 61.111 0.00 0.00 0.00 2.74
22 23 2.202756 CGCCCTGTCTTCGCCTAC 60.203 66.667 0.00 0.00 0.00 3.18
23 24 3.458163 CCGCCCTGTCTTCGCCTA 61.458 66.667 0.00 0.00 0.00 3.93
39 40 2.292794 TATGTTCTCCGCTGTCCGCC 62.293 60.000 0.00 0.00 35.03 6.13
40 41 1.141019 TATGTTCTCCGCTGTCCGC 59.859 57.895 0.00 0.00 35.03 5.54
41 42 0.527817 GGTATGTTCTCCGCTGTCCG 60.528 60.000 0.00 0.00 0.00 4.79
42 43 0.527817 CGGTATGTTCTCCGCTGTCC 60.528 60.000 0.00 0.00 40.28 4.02
43 44 0.527817 CCGGTATGTTCTCCGCTGTC 60.528 60.000 0.00 0.00 44.63 3.51
44 45 1.515954 CCGGTATGTTCTCCGCTGT 59.484 57.895 0.00 0.00 44.63 4.40
45 46 1.227263 CCCGGTATGTTCTCCGCTG 60.227 63.158 0.00 0.00 44.63 5.18
46 47 2.432300 CCCCGGTATGTTCTCCGCT 61.432 63.158 0.00 0.00 44.63 5.52
47 48 2.108362 CCCCGGTATGTTCTCCGC 59.892 66.667 0.00 0.00 44.63 5.54
48 49 1.740285 CTCCCCGGTATGTTCTCCG 59.260 63.158 0.00 0.00 45.42 4.63
49 50 0.398098 TCCTCCCCGGTATGTTCTCC 60.398 60.000 0.00 0.00 0.00 3.71
50 51 1.041437 CTCCTCCCCGGTATGTTCTC 58.959 60.000 0.00 0.00 0.00 2.87
51 52 0.635009 TCTCCTCCCCGGTATGTTCT 59.365 55.000 0.00 0.00 0.00 3.01
52 53 1.413077 CTTCTCCTCCCCGGTATGTTC 59.587 57.143 0.00 0.00 0.00 3.18
53 54 1.497161 CTTCTCCTCCCCGGTATGTT 58.503 55.000 0.00 0.00 0.00 2.71
54 55 0.398664 CCTTCTCCTCCCCGGTATGT 60.399 60.000 0.00 0.00 0.00 2.29
55 56 1.759459 GCCTTCTCCTCCCCGGTATG 61.759 65.000 0.00 0.00 0.00 2.39
56 57 1.459730 GCCTTCTCCTCCCCGGTAT 60.460 63.158 0.00 0.00 0.00 2.73
57 58 2.042230 GCCTTCTCCTCCCCGGTA 60.042 66.667 0.00 0.00 0.00 4.02
58 59 4.012721 AGCCTTCTCCTCCCCGGT 62.013 66.667 0.00 0.00 0.00 5.28
59 60 3.474570 CAGCCTTCTCCTCCCCGG 61.475 72.222 0.00 0.00 0.00 5.73
60 61 2.685380 ACAGCCTTCTCCTCCCCG 60.685 66.667 0.00 0.00 0.00 5.73
61 62 1.613630 TCACAGCCTTCTCCTCCCC 60.614 63.158 0.00 0.00 0.00 4.81
62 63 1.599576 GTCACAGCCTTCTCCTCCC 59.400 63.158 0.00 0.00 0.00 4.30
63 64 1.216710 CGTCACAGCCTTCTCCTCC 59.783 63.158 0.00 0.00 0.00 4.30
64 65 0.172352 CTCGTCACAGCCTTCTCCTC 59.828 60.000 0.00 0.00 0.00 3.71
65 66 0.540830 ACTCGTCACAGCCTTCTCCT 60.541 55.000 0.00 0.00 0.00 3.69
66 67 1.135344 GTACTCGTCACAGCCTTCTCC 60.135 57.143 0.00 0.00 0.00 3.71
67 68 1.813786 AGTACTCGTCACAGCCTTCTC 59.186 52.381 0.00 0.00 0.00 2.87
68 69 1.813786 GAGTACTCGTCACAGCCTTCT 59.186 52.381 7.22 0.00 0.00 2.85
69 70 1.813786 AGAGTACTCGTCACAGCCTTC 59.186 52.381 17.07 0.00 34.09 3.46
70 71 1.912417 AGAGTACTCGTCACAGCCTT 58.088 50.000 17.07 0.00 34.09 4.35
71 72 2.634600 CTAGAGTACTCGTCACAGCCT 58.365 52.381 17.07 0.00 34.09 4.58
72 73 1.671845 CCTAGAGTACTCGTCACAGCC 59.328 57.143 17.07 0.00 34.09 4.85
73 74 2.610374 CTCCTAGAGTACTCGTCACAGC 59.390 54.545 17.07 0.00 34.09 4.40
74 75 4.116961 CTCTCCTAGAGTACTCGTCACAG 58.883 52.174 17.07 10.56 37.57 3.66
75 76 3.679361 GCTCTCCTAGAGTACTCGTCACA 60.679 52.174 17.07 1.35 44.12 3.58
76 77 2.867975 GCTCTCCTAGAGTACTCGTCAC 59.132 54.545 17.07 0.00 44.12 3.67
77 78 2.158928 GGCTCTCCTAGAGTACTCGTCA 60.159 54.545 17.07 6.03 44.12 4.35
78 79 2.103601 AGGCTCTCCTAGAGTACTCGTC 59.896 54.545 17.07 2.84 44.12 4.20
79 80 2.103601 GAGGCTCTCCTAGAGTACTCGT 59.896 54.545 17.07 8.42 44.12 4.18
80 81 2.762745 GAGGCTCTCCTAGAGTACTCG 58.237 57.143 17.07 4.08 44.12 4.18
81 82 2.762745 CGAGGCTCTCCTAGAGTACTC 58.237 57.143 15.41 15.41 44.12 2.59
82 83 1.202722 GCGAGGCTCTCCTAGAGTACT 60.203 57.143 13.50 0.00 44.12 2.73
83 84 1.232119 GCGAGGCTCTCCTAGAGTAC 58.768 60.000 13.50 0.00 44.12 2.73
84 85 0.108963 GGCGAGGCTCTCCTAGAGTA 59.891 60.000 16.24 0.00 44.12 2.59
85 86 1.152839 GGCGAGGCTCTCCTAGAGT 60.153 63.158 16.24 0.00 44.12 3.24
86 87 1.901464 GGGCGAGGCTCTCCTAGAG 60.901 68.421 22.00 1.25 44.46 2.43
87 88 2.196229 GGGCGAGGCTCTCCTAGA 59.804 66.667 22.00 0.00 44.46 2.43
88 89 3.291383 CGGGCGAGGCTCTCCTAG 61.291 72.222 22.00 13.13 44.46 3.02
89 90 4.896829 CCGGGCGAGGCTCTCCTA 62.897 72.222 22.00 0.00 44.46 2.94
162 163 4.388499 TTTCCTCGCCGCCTCCAC 62.388 66.667 0.00 0.00 0.00 4.02
163 164 4.388499 GTTTCCTCGCCGCCTCCA 62.388 66.667 0.00 0.00 0.00 3.86
173 174 2.609759 TTTTCGCGGCGGTTTCCTC 61.610 57.895 23.46 0.00 0.00 3.71
174 175 2.592287 TTTTCGCGGCGGTTTCCT 60.592 55.556 23.46 0.00 0.00 3.36
175 176 2.427905 GTTTTCGCGGCGGTTTCC 60.428 61.111 23.46 3.47 0.00 3.13
176 177 2.793759 CGTTTTCGCGGCGGTTTC 60.794 61.111 23.46 10.07 36.22 2.78
177 178 3.231324 CTCGTTTTCGCGGCGGTTT 62.231 57.895 23.46 0.00 43.73 3.27
178 179 3.708734 CTCGTTTTCGCGGCGGTT 61.709 61.111 23.46 0.00 43.73 4.44
179 180 4.955774 ACTCGTTTTCGCGGCGGT 62.956 61.111 23.46 7.48 43.73 5.68
180 181 4.130281 GACTCGTTTTCGCGGCGG 62.130 66.667 23.46 5.85 43.73 6.13
181 182 4.130281 GGACTCGTTTTCGCGGCG 62.130 66.667 17.70 17.70 43.73 6.46
182 183 3.785499 GGGACTCGTTTTCGCGGC 61.785 66.667 6.13 0.00 43.73 6.53
183 184 3.475774 CGGGACTCGTTTTCGCGG 61.476 66.667 6.13 0.00 43.55 6.46
185 186 2.713894 CGTCGGGACTCGTTTTCGC 61.714 63.158 0.00 0.00 43.73 4.70
186 187 2.713894 GCGTCGGGACTCGTTTTCG 61.714 63.158 0.00 0.00 45.64 3.46
187 188 2.713894 CGCGTCGGGACTCGTTTTC 61.714 63.158 2.62 0.00 40.32 2.29
188 189 2.732094 CGCGTCGGGACTCGTTTT 60.732 61.111 2.62 0.00 40.32 2.43
189 190 3.606065 CTCGCGTCGGGACTCGTTT 62.606 63.158 8.06 0.00 40.10 3.60
190 191 4.099170 CTCGCGTCGGGACTCGTT 62.099 66.667 8.06 0.00 40.10 3.85
192 193 4.517703 GACTCGCGTCGGGACTCG 62.518 72.222 8.06 4.93 40.49 4.18
218 219 1.511768 GGATATCTCCGCGGTAGGC 59.488 63.158 27.15 10.75 38.69 3.93
219 220 0.323542 AGGGATATCTCCGCGGTAGG 60.324 60.000 27.15 16.42 43.11 3.18
220 221 1.096416 GAGGGATATCTCCGCGGTAG 58.904 60.000 27.15 20.47 43.11 3.18
221 222 0.675837 CGAGGGATATCTCCGCGGTA 60.676 60.000 27.15 15.53 43.11 4.02
222 223 1.972223 CGAGGGATATCTCCGCGGT 60.972 63.158 27.15 8.80 43.11 5.68
223 224 2.878429 CGAGGGATATCTCCGCGG 59.122 66.667 22.12 22.12 43.11 6.46
224 225 1.938657 ATGCGAGGGATATCTCCGCG 61.939 60.000 24.09 23.38 43.11 6.46
225 226 0.459237 CATGCGAGGGATATCTCCGC 60.459 60.000 23.47 23.47 43.11 5.54
226 227 0.459237 GCATGCGAGGGATATCTCCG 60.459 60.000 0.00 4.09 43.11 4.63
227 228 0.107945 GGCATGCGAGGGATATCTCC 60.108 60.000 12.44 0.43 41.26 3.71
228 229 0.107945 GGGCATGCGAGGGATATCTC 60.108 60.000 12.44 0.00 0.00 2.75
229 230 1.892819 CGGGCATGCGAGGGATATCT 61.893 60.000 12.44 0.00 0.00 1.98
230 231 1.448540 CGGGCATGCGAGGGATATC 60.449 63.158 12.44 0.00 0.00 1.63
231 232 2.665000 CGGGCATGCGAGGGATAT 59.335 61.111 12.44 0.00 0.00 1.63
232 233 3.625897 CCGGGCATGCGAGGGATA 61.626 66.667 18.94 0.00 0.00 2.59
278 279 4.388499 TTTCCTCGCCGCCTCCAC 62.388 66.667 0.00 0.00 0.00 4.02
279 280 4.388499 GTTTCCTCGCCGCCTCCA 62.388 66.667 0.00 0.00 0.00 3.86
289 290 2.609759 TTTTCGCGGCGGTTTCCTC 61.610 57.895 23.46 0.00 0.00 3.71
290 291 2.592287 TTTTCGCGGCGGTTTCCT 60.592 55.556 23.46 0.00 0.00 3.36
291 292 2.427905 GTTTTCGCGGCGGTTTCC 60.428 61.111 23.46 3.47 0.00 3.13
292 293 2.793759 CGTTTTCGCGGCGGTTTC 60.794 61.111 23.46 10.07 36.22 2.78
293 294 3.231324 CTCGTTTTCGCGGCGGTTT 62.231 57.895 23.46 0.00 43.73 3.27
294 295 3.708734 CTCGTTTTCGCGGCGGTT 61.709 61.111 23.46 0.00 43.73 4.44
295 296 4.955774 ACTCGTTTTCGCGGCGGT 62.956 61.111 23.46 7.48 43.73 5.68
296 297 4.130281 GACTCGTTTTCGCGGCGG 62.130 66.667 23.46 5.85 43.73 6.13
297 298 4.130281 GGACTCGTTTTCGCGGCG 62.130 66.667 17.70 17.70 43.73 6.46
298 299 3.785499 GGGACTCGTTTTCGCGGC 61.785 66.667 6.13 0.00 43.73 6.53
299 300 3.475774 CGGGACTCGTTTTCGCGG 61.476 66.667 6.13 0.00 43.55 6.46
301 302 2.713894 CGTCGGGACTCGTTTTCGC 61.714 63.158 0.00 0.00 43.73 4.70
302 303 2.713894 GCGTCGGGACTCGTTTTCG 61.714 63.158 0.00 0.00 45.64 3.46
303 304 2.713894 CGCGTCGGGACTCGTTTTC 61.714 63.158 2.62 0.00 40.32 2.29
304 305 2.732094 CGCGTCGGGACTCGTTTT 60.732 61.111 2.62 0.00 40.32 2.43
305 306 3.606065 CTCGCGTCGGGACTCGTTT 62.606 63.158 8.06 0.00 40.10 3.60
306 307 4.099170 CTCGCGTCGGGACTCGTT 62.099 66.667 8.06 0.00 40.10 3.85
308 309 4.517703 GACTCGCGTCGGGACTCG 62.518 72.222 8.06 4.93 40.49 4.18
334 335 1.511768 GGATATCTCCGCGGTAGGC 59.488 63.158 27.15 10.75 38.69 3.93
335 336 0.323542 AGGGATATCTCCGCGGTAGG 60.324 60.000 27.15 16.42 43.11 3.18
336 337 1.096416 GAGGGATATCTCCGCGGTAG 58.904 60.000 27.15 20.47 43.11 3.18
337 338 0.675837 CGAGGGATATCTCCGCGGTA 60.676 60.000 27.15 15.53 43.11 4.02
338 339 1.972223 CGAGGGATATCTCCGCGGT 60.972 63.158 27.15 8.80 43.11 5.68
339 340 2.878429 CGAGGGATATCTCCGCGG 59.122 66.667 22.12 22.12 43.11 6.46
340 341 1.938657 ATGCGAGGGATATCTCCGCG 61.939 60.000 24.09 23.38 43.11 6.46
341 342 0.459237 CATGCGAGGGATATCTCCGC 60.459 60.000 23.47 23.47 43.11 5.54
342 343 0.459237 GCATGCGAGGGATATCTCCG 60.459 60.000 0.00 4.09 43.11 4.63
343 344 0.107945 GGCATGCGAGGGATATCTCC 60.108 60.000 12.44 0.43 41.26 3.71
344 345 0.107945 GGGCATGCGAGGGATATCTC 60.108 60.000 12.44 0.00 0.00 2.75
345 346 1.892819 CGGGCATGCGAGGGATATCT 61.893 60.000 12.44 0.00 0.00 1.98
346 347 1.448540 CGGGCATGCGAGGGATATC 60.449 63.158 12.44 0.00 0.00 1.63
347 348 2.665000 CGGGCATGCGAGGGATAT 59.335 61.111 12.44 0.00 0.00 1.63
348 349 3.625897 CCGGGCATGCGAGGGATA 61.626 66.667 18.94 0.00 0.00 2.59
381 382 4.717629 TGCTCCAACCTCGACGCG 62.718 66.667 3.53 3.53 0.00 6.01
382 383 2.811317 CTGCTCCAACCTCGACGC 60.811 66.667 0.00 0.00 0.00 5.19
383 384 2.125912 CCTGCTCCAACCTCGACG 60.126 66.667 0.00 0.00 0.00 5.12
384 385 2.435059 GCCTGCTCCAACCTCGAC 60.435 66.667 0.00 0.00 0.00 4.20
385 386 2.922503 TGCCTGCTCCAACCTCGA 60.923 61.111 0.00 0.00 0.00 4.04
386 387 2.435586 CTGCCTGCTCCAACCTCG 60.436 66.667 0.00 0.00 0.00 4.63
387 388 2.749441 GCTGCCTGCTCCAACCTC 60.749 66.667 0.00 0.00 38.95 3.85
388 389 4.357279 GGCTGCCTGCTCCAACCT 62.357 66.667 12.43 0.00 42.39 3.50
425 426 4.410400 GACACCCCGCTCCCCTTG 62.410 72.222 0.00 0.00 0.00 3.61
450 451 2.109799 CTACTCGCTGCCATGGGG 59.890 66.667 15.13 0.00 37.18 4.96
451 452 2.109799 CCTACTCGCTGCCATGGG 59.890 66.667 15.13 0.00 0.00 4.00
452 453 2.590007 GCCTACTCGCTGCCATGG 60.590 66.667 7.63 7.63 0.00 3.66
453 454 2.590007 GGCCTACTCGCTGCCATG 60.590 66.667 0.00 0.00 44.70 3.66
454 455 4.227134 CGGCCTACTCGCTGCCAT 62.227 66.667 0.00 0.00 45.63 4.40
457 458 4.874977 GACCGGCCTACTCGCTGC 62.875 72.222 0.00 0.00 33.52 5.25
458 459 4.554363 CGACCGGCCTACTCGCTG 62.554 72.222 0.00 0.00 34.72 5.18
459 460 4.790962 TCGACCGGCCTACTCGCT 62.791 66.667 0.00 0.00 0.00 4.93
460 461 3.346631 TTTCGACCGGCCTACTCGC 62.347 63.158 0.00 0.00 0.00 5.03
461 462 1.226603 CTTTCGACCGGCCTACTCG 60.227 63.158 0.00 2.49 0.00 4.18
462 463 1.141234 CCTTTCGACCGGCCTACTC 59.859 63.158 0.00 0.00 0.00 2.59
463 464 2.356780 CCCTTTCGACCGGCCTACT 61.357 63.158 0.00 0.00 0.00 2.57
464 465 2.186125 CCCTTTCGACCGGCCTAC 59.814 66.667 0.00 0.00 0.00 3.18
465 466 2.284112 ACCCTTTCGACCGGCCTA 60.284 61.111 0.00 0.00 0.00 3.93
466 467 4.016706 CACCCTTTCGACCGGCCT 62.017 66.667 0.00 0.00 0.00 5.19
515 516 1.381928 TAGCTTAGGCGACTCCACCG 61.382 60.000 0.00 0.00 44.37 4.94
516 517 1.041437 ATAGCTTAGGCGACTCCACC 58.959 55.000 0.00 0.00 44.37 4.61
517 518 2.474816 CAATAGCTTAGGCGACTCCAC 58.525 52.381 0.00 0.00 44.37 4.02
518 519 1.202533 GCAATAGCTTAGGCGACTCCA 60.203 52.381 0.00 0.00 44.37 3.86
519 520 1.503294 GCAATAGCTTAGGCGACTCC 58.497 55.000 0.00 0.00 44.37 3.85
520 521 1.202533 TGGCAATAGCTTAGGCGACTC 60.203 52.381 0.00 0.00 44.37 3.36
521 522 0.830648 TGGCAATAGCTTAGGCGACT 59.169 50.000 0.00 0.00 44.37 4.18
522 523 1.202533 TCTGGCAATAGCTTAGGCGAC 60.203 52.381 0.00 0.00 44.37 5.19
523 524 1.069204 CTCTGGCAATAGCTTAGGCGA 59.931 52.381 0.00 0.00 44.37 5.54
524 525 1.506493 CTCTGGCAATAGCTTAGGCG 58.494 55.000 0.00 0.00 44.37 5.52
525 526 1.202746 AGCTCTGGCAATAGCTTAGGC 60.203 52.381 16.09 0.00 46.82 3.93
526 527 2.926778 AGCTCTGGCAATAGCTTAGG 57.073 50.000 16.09 0.00 46.82 2.69
531 532 0.182299 AAGGGAGCTCTGGCAATAGC 59.818 55.000 14.64 12.35 41.70 2.97
532 533 1.487976 TGAAGGGAGCTCTGGCAATAG 59.512 52.381 14.64 0.00 41.70 1.73
533 534 1.583556 TGAAGGGAGCTCTGGCAATA 58.416 50.000 14.64 0.00 41.70 1.90
534 535 0.700564 TTGAAGGGAGCTCTGGCAAT 59.299 50.000 14.64 0.00 41.70 3.56
535 536 0.250901 GTTGAAGGGAGCTCTGGCAA 60.251 55.000 14.64 10.23 41.70 4.52
536 537 1.130054 AGTTGAAGGGAGCTCTGGCA 61.130 55.000 14.64 4.42 41.70 4.92
537 538 0.392327 GAGTTGAAGGGAGCTCTGGC 60.392 60.000 14.64 0.00 39.06 4.85
538 539 0.251634 GGAGTTGAAGGGAGCTCTGG 59.748 60.000 14.64 0.00 0.00 3.86
539 540 0.251634 GGGAGTTGAAGGGAGCTCTG 59.748 60.000 14.64 0.00 0.00 3.35
540 541 0.118144 AGGGAGTTGAAGGGAGCTCT 59.882 55.000 14.64 0.00 0.00 4.09
541 542 1.760029 CTAGGGAGTTGAAGGGAGCTC 59.240 57.143 4.71 4.71 0.00 4.09
542 543 1.623834 CCTAGGGAGTTGAAGGGAGCT 60.624 57.143 0.00 0.00 0.00 4.09
543 544 0.833949 CCTAGGGAGTTGAAGGGAGC 59.166 60.000 0.00 0.00 0.00 4.70
544 545 2.552093 TCCTAGGGAGTTGAAGGGAG 57.448 55.000 9.46 0.00 0.00 4.30
545 546 3.246350 TGAATCCTAGGGAGTTGAAGGGA 60.246 47.826 9.46 0.00 34.05 4.20
546 547 3.115390 TGAATCCTAGGGAGTTGAAGGG 58.885 50.000 9.46 0.00 34.05 3.95
547 548 4.033709 TCTGAATCCTAGGGAGTTGAAGG 58.966 47.826 9.46 0.00 34.05 3.46
548 549 4.714308 AGTCTGAATCCTAGGGAGTTGAAG 59.286 45.833 9.46 2.95 34.05 3.02
549 550 4.689062 AGTCTGAATCCTAGGGAGTTGAA 58.311 43.478 9.46 0.00 34.05 2.69
550 551 4.338795 AGTCTGAATCCTAGGGAGTTGA 57.661 45.455 9.46 0.00 34.05 3.18
551 552 5.428184 AAAGTCTGAATCCTAGGGAGTTG 57.572 43.478 9.46 0.00 34.05 3.16
552 553 5.804771 GCAAAAGTCTGAATCCTAGGGAGTT 60.805 44.000 9.46 4.13 34.05 3.01
553 554 4.323868 GCAAAAGTCTGAATCCTAGGGAGT 60.324 45.833 9.46 0.00 34.05 3.85
554 555 4.195416 GCAAAAGTCTGAATCCTAGGGAG 58.805 47.826 9.46 0.36 34.05 4.30
555 556 3.587061 TGCAAAAGTCTGAATCCTAGGGA 59.413 43.478 9.46 0.00 35.55 4.20
556 557 3.944015 CTGCAAAAGTCTGAATCCTAGGG 59.056 47.826 9.46 0.00 0.00 3.53
557 558 4.583871 ACTGCAAAAGTCTGAATCCTAGG 58.416 43.478 0.82 0.82 31.64 3.02
558 559 6.402222 ACTACTGCAAAAGTCTGAATCCTAG 58.598 40.000 0.00 0.00 40.56 3.02
559 560 6.360370 ACTACTGCAAAAGTCTGAATCCTA 57.640 37.500 0.00 0.00 40.56 2.94
560 561 5.234466 ACTACTGCAAAAGTCTGAATCCT 57.766 39.130 0.00 0.00 40.56 3.24
561 562 6.166982 ACTACTACTGCAAAAGTCTGAATCC 58.833 40.000 3.98 0.00 40.56 3.01
562 563 7.659652 AACTACTACTGCAAAAGTCTGAATC 57.340 36.000 3.98 0.00 40.56 2.52
563 564 8.585881 TCTAACTACTACTGCAAAAGTCTGAAT 58.414 33.333 3.98 0.00 40.56 2.57
564 565 7.948357 TCTAACTACTACTGCAAAAGTCTGAA 58.052 34.615 3.98 0.00 40.56 3.02
565 566 7.447545 TCTCTAACTACTACTGCAAAAGTCTGA 59.552 37.037 3.98 0.00 40.56 3.27
566 567 7.594714 TCTCTAACTACTACTGCAAAAGTCTG 58.405 38.462 3.98 2.72 40.56 3.51
567 568 7.666388 TCTCTCTAACTACTACTGCAAAAGTCT 59.334 37.037 3.98 0.00 40.56 3.24
568 569 7.818642 TCTCTCTAACTACTACTGCAAAAGTC 58.181 38.462 3.98 0.00 40.56 3.01
569 570 7.762588 TCTCTCTAACTACTACTGCAAAAGT 57.237 36.000 5.95 5.95 43.40 2.66
573 574 9.628500 TGAATATCTCTCTAACTACTACTGCAA 57.372 33.333 0.00 0.00 0.00 4.08
574 575 9.628500 TTGAATATCTCTCTAACTACTACTGCA 57.372 33.333 0.00 0.00 0.00 4.41
578 579 9.881529 CGGTTTGAATATCTCTCTAACTACTAC 57.118 37.037 0.00 0.00 31.72 2.73
579 580 9.842775 TCGGTTTGAATATCTCTCTAACTACTA 57.157 33.333 0.00 0.00 31.72 1.82
580 581 8.749026 TCGGTTTGAATATCTCTCTAACTACT 57.251 34.615 0.00 0.00 31.72 2.57
581 582 9.453325 CTTCGGTTTGAATATCTCTCTAACTAC 57.547 37.037 0.00 0.00 35.63 2.73
582 583 8.136165 GCTTCGGTTTGAATATCTCTCTAACTA 58.864 37.037 0.00 0.00 35.63 2.24
583 584 6.981559 GCTTCGGTTTGAATATCTCTCTAACT 59.018 38.462 0.00 0.00 35.63 2.24
584 585 6.757010 TGCTTCGGTTTGAATATCTCTCTAAC 59.243 38.462 0.00 0.00 35.63 2.34
585 586 6.873997 TGCTTCGGTTTGAATATCTCTCTAA 58.126 36.000 0.00 0.00 35.63 2.10
586 587 6.465439 TGCTTCGGTTTGAATATCTCTCTA 57.535 37.500 0.00 0.00 35.63 2.43
587 588 5.344743 TGCTTCGGTTTGAATATCTCTCT 57.655 39.130 0.00 0.00 35.63 3.10
588 589 7.600375 TCATATGCTTCGGTTTGAATATCTCTC 59.400 37.037 0.00 0.00 35.63 3.20
589 590 7.445121 TCATATGCTTCGGTTTGAATATCTCT 58.555 34.615 0.00 0.00 35.63 3.10
590 591 7.658179 TCATATGCTTCGGTTTGAATATCTC 57.342 36.000 0.00 0.00 35.63 2.75
591 592 7.041098 GGTTCATATGCTTCGGTTTGAATATCT 60.041 37.037 0.00 0.00 35.63 1.98
592 593 7.078228 GGTTCATATGCTTCGGTTTGAATATC 58.922 38.462 0.00 0.00 35.63 1.63
593 594 6.293407 CGGTTCATATGCTTCGGTTTGAATAT 60.293 38.462 0.00 0.00 35.63 1.28
594 595 5.007234 CGGTTCATATGCTTCGGTTTGAATA 59.993 40.000 0.00 0.00 35.63 1.75
595 596 4.201910 CGGTTCATATGCTTCGGTTTGAAT 60.202 41.667 0.00 0.00 35.63 2.57
596 597 3.126171 CGGTTCATATGCTTCGGTTTGAA 59.874 43.478 0.00 0.00 34.74 2.69
597 598 2.675844 CGGTTCATATGCTTCGGTTTGA 59.324 45.455 0.00 0.00 0.00 2.69
598 599 2.223249 CCGGTTCATATGCTTCGGTTTG 60.223 50.000 16.77 0.00 33.63 2.93
599 600 2.014128 CCGGTTCATATGCTTCGGTTT 58.986 47.619 16.77 0.00 33.63 3.27
600 601 1.208535 TCCGGTTCATATGCTTCGGTT 59.791 47.619 21.12 0.00 38.70 4.44
601 602 0.828022 TCCGGTTCATATGCTTCGGT 59.172 50.000 21.12 0.00 38.70 4.69
602 603 1.948104 TTCCGGTTCATATGCTTCGG 58.052 50.000 18.09 18.09 38.92 4.30
603 604 2.287915 CCTTTCCGGTTCATATGCTTCG 59.712 50.000 0.00 1.46 0.00 3.79
604 605 3.541632 TCCTTTCCGGTTCATATGCTTC 58.458 45.455 0.00 0.00 0.00 3.86
605 606 3.545703 CTCCTTTCCGGTTCATATGCTT 58.454 45.455 0.00 0.00 0.00 3.91
606 607 2.158755 CCTCCTTTCCGGTTCATATGCT 60.159 50.000 0.00 0.00 0.00 3.79
607 608 2.222027 CCTCCTTTCCGGTTCATATGC 58.778 52.381 0.00 0.00 0.00 3.14
608 609 2.438021 TCCCTCCTTTCCGGTTCATATG 59.562 50.000 0.00 0.00 0.00 1.78
609 610 2.706190 CTCCCTCCTTTCCGGTTCATAT 59.294 50.000 0.00 0.00 0.00 1.78
610 611 2.116238 CTCCCTCCTTTCCGGTTCATA 58.884 52.381 0.00 0.00 0.00 2.15
611 612 0.912486 CTCCCTCCTTTCCGGTTCAT 59.088 55.000 0.00 0.00 0.00 2.57
612 613 0.473117 ACTCCCTCCTTTCCGGTTCA 60.473 55.000 0.00 0.00 0.00 3.18
613 614 0.249676 GACTCCCTCCTTTCCGGTTC 59.750 60.000 0.00 0.00 0.00 3.62
614 615 0.473117 TGACTCCCTCCTTTCCGGTT 60.473 55.000 0.00 0.00 0.00 4.44
615 616 0.252742 ATGACTCCCTCCTTTCCGGT 60.253 55.000 0.00 0.00 0.00 5.28
616 617 0.912486 AATGACTCCCTCCTTTCCGG 59.088 55.000 0.00 0.00 0.00 5.14
617 618 1.834263 AGAATGACTCCCTCCTTTCCG 59.166 52.381 0.00 0.00 0.00 4.30
618 619 3.615155 CAAGAATGACTCCCTCCTTTCC 58.385 50.000 0.00 0.00 0.00 3.13
619 620 3.009584 ACCAAGAATGACTCCCTCCTTTC 59.990 47.826 0.00 0.00 0.00 2.62
620 621 2.989571 ACCAAGAATGACTCCCTCCTTT 59.010 45.455 0.00 0.00 0.00 3.11
621 622 2.637165 ACCAAGAATGACTCCCTCCTT 58.363 47.619 0.00 0.00 0.00 3.36
622 623 2.350863 ACCAAGAATGACTCCCTCCT 57.649 50.000 0.00 0.00 0.00 3.69
623 624 2.158885 GCTACCAAGAATGACTCCCTCC 60.159 54.545 0.00 0.00 0.00 4.30
624 625 2.158885 GGCTACCAAGAATGACTCCCTC 60.159 54.545 0.00 0.00 0.00 4.30
625 626 1.840635 GGCTACCAAGAATGACTCCCT 59.159 52.381 0.00 0.00 0.00 4.20
626 627 1.559682 TGGCTACCAAGAATGACTCCC 59.440 52.381 0.00 0.00 0.00 4.30
627 628 3.350219 TTGGCTACCAAGAATGACTCC 57.650 47.619 0.00 0.00 38.75 3.85
628 629 4.327680 AGTTTGGCTACCAAGAATGACTC 58.672 43.478 0.00 0.00 44.84 3.36
629 630 4.373156 AGTTTGGCTACCAAGAATGACT 57.627 40.909 0.00 0.00 44.84 3.41
630 631 4.762251 AGAAGTTTGGCTACCAAGAATGAC 59.238 41.667 0.00 0.00 44.84 3.06
631 632 4.985538 AGAAGTTTGGCTACCAAGAATGA 58.014 39.130 0.00 0.00 44.84 2.57
632 633 5.006386 AGAGAAGTTTGGCTACCAAGAATG 58.994 41.667 0.00 0.00 44.84 2.67
633 634 5.006386 CAGAGAAGTTTGGCTACCAAGAAT 58.994 41.667 0.00 0.00 44.84 2.40
634 635 4.389374 CAGAGAAGTTTGGCTACCAAGAA 58.611 43.478 0.00 0.00 44.84 2.52
635 636 3.807209 GCAGAGAAGTTTGGCTACCAAGA 60.807 47.826 0.00 0.00 44.84 3.02
636 637 2.485814 GCAGAGAAGTTTGGCTACCAAG 59.514 50.000 0.00 0.00 44.84 3.61
637 638 2.158682 TGCAGAGAAGTTTGGCTACCAA 60.159 45.455 0.00 0.00 42.29 3.67
638 639 1.419762 TGCAGAGAAGTTTGGCTACCA 59.580 47.619 0.00 0.00 0.00 3.25
639 640 2.185004 TGCAGAGAAGTTTGGCTACC 57.815 50.000 0.00 0.00 0.00 3.18
640 641 4.479619 CATTTGCAGAGAAGTTTGGCTAC 58.520 43.478 0.00 0.00 0.00 3.58
641 642 3.507233 CCATTTGCAGAGAAGTTTGGCTA 59.493 43.478 0.00 0.00 0.00 3.93
642 643 2.298163 CCATTTGCAGAGAAGTTTGGCT 59.702 45.455 0.00 0.00 0.00 4.75
643 644 2.036346 ACCATTTGCAGAGAAGTTTGGC 59.964 45.455 0.00 0.00 0.00 4.52
644 645 3.645884 CACCATTTGCAGAGAAGTTTGG 58.354 45.455 0.00 0.00 0.00 3.28
657 658 2.546645 AATCGCCAGCGCACCATTTG 62.547 55.000 11.47 0.00 39.59 2.32
658 659 2.342650 AATCGCCAGCGCACCATTT 61.343 52.632 11.47 0.00 39.59 2.32
659 660 2.751436 AATCGCCAGCGCACCATT 60.751 55.556 11.47 0.00 39.59 3.16
660 661 3.511595 CAATCGCCAGCGCACCAT 61.512 61.111 11.47 0.00 39.59 3.55
661 662 4.695993 TCAATCGCCAGCGCACCA 62.696 61.111 11.47 0.00 39.59 4.17
662 663 2.470801 TTTTCAATCGCCAGCGCACC 62.471 55.000 11.47 0.00 39.59 5.01
663 664 1.081509 TTTTCAATCGCCAGCGCAC 60.082 52.632 11.47 0.00 39.59 5.34
664 665 1.081509 GTTTTCAATCGCCAGCGCA 60.082 52.632 11.47 0.00 39.59 6.09
665 666 1.081509 TGTTTTCAATCGCCAGCGC 60.082 52.632 7.27 0.00 39.59 5.92
666 667 1.059657 CGTGTTTTCAATCGCCAGCG 61.060 55.000 5.50 5.50 41.35 5.18
667 668 1.337110 GCGTGTTTTCAATCGCCAGC 61.337 55.000 0.00 0.00 38.69 4.85
668 669 0.238289 AGCGTGTTTTCAATCGCCAG 59.762 50.000 4.84 0.00 43.24 4.85
669 670 0.040514 CAGCGTGTTTTCAATCGCCA 60.041 50.000 4.84 0.00 43.24 5.69
670 671 1.337110 GCAGCGTGTTTTCAATCGCC 61.337 55.000 4.84 0.00 43.24 5.54
671 672 0.660005 TGCAGCGTGTTTTCAATCGC 60.660 50.000 0.00 0.00 42.79 4.58
672 673 1.044725 GTGCAGCGTGTTTTCAATCG 58.955 50.000 0.00 0.00 0.00 3.34
673 674 2.118228 TGTGCAGCGTGTTTTCAATC 57.882 45.000 0.00 0.00 0.00 2.67
674 675 2.098934 TCTTGTGCAGCGTGTTTTCAAT 59.901 40.909 0.00 0.00 0.00 2.57
675 676 1.470494 TCTTGTGCAGCGTGTTTTCAA 59.530 42.857 0.00 0.00 0.00 2.69
676 677 1.090728 TCTTGTGCAGCGTGTTTTCA 58.909 45.000 0.00 0.00 0.00 2.69
677 678 2.046313 CATCTTGTGCAGCGTGTTTTC 58.954 47.619 0.00 0.00 0.00 2.29
678 679 1.405105 ACATCTTGTGCAGCGTGTTTT 59.595 42.857 0.00 0.00 0.00 2.43
679 680 1.024271 ACATCTTGTGCAGCGTGTTT 58.976 45.000 0.00 0.00 0.00 2.83
680 681 1.024271 AACATCTTGTGCAGCGTGTT 58.976 45.000 0.00 0.00 0.00 3.32
681 682 1.024271 AAACATCTTGTGCAGCGTGT 58.976 45.000 0.00 0.00 0.00 4.49
682 683 2.967459 TAAACATCTTGTGCAGCGTG 57.033 45.000 0.00 0.00 0.00 5.34
683 684 3.980646 TTTAAACATCTTGTGCAGCGT 57.019 38.095 0.00 0.00 0.00 5.07
684 685 5.827568 AAATTTAAACATCTTGTGCAGCG 57.172 34.783 0.00 0.00 0.00 5.18
737 738 4.388773 ACTGCATGCACGGTTATTATATCG 59.611 41.667 18.46 4.16 0.00 2.92
746 747 3.343617 AGTTATTACTGCATGCACGGTT 58.656 40.909 18.46 4.98 31.99 4.44
869 3118 0.908198 AAGCAGAGAGTGATGGGGAC 59.092 55.000 0.00 0.00 0.00 4.46
997 3252 1.662629 CGAGTTGAGCACCAGCATTAG 59.337 52.381 0.00 0.00 45.49 1.73
1357 3612 1.450531 CGATACGAACTACCGGGGCT 61.451 60.000 6.32 0.00 0.00 5.19
1383 3638 1.975363 GCATTGAGCAGCACGGTCTC 61.975 60.000 0.00 0.00 44.79 3.36
1424 3679 2.279582 ACCTCACGAAATCGCTAGTG 57.720 50.000 2.15 0.00 44.43 2.74
1430 3685 1.127951 CCGGAAAACCTCACGAAATCG 59.872 52.381 0.00 0.48 46.33 3.34
1442 3697 5.347012 TCTGACGAAATTTACCGGAAAAC 57.653 39.130 9.46 0.81 0.00 2.43
1456 3711 0.169451 TAATGTCGCGCTCTGACGAA 59.831 50.000 5.56 0.00 40.47 3.85
1458 3713 0.294887 GTTAATGTCGCGCTCTGACG 59.705 55.000 5.56 0.00 39.22 4.35
1474 3737 2.073056 CACGTACATGCTGCCAAGTTA 58.927 47.619 0.00 0.00 0.00 2.24
1480 3743 2.324330 TGTGCACGTACATGCTGCC 61.324 57.895 15.74 3.87 46.28 4.85
1539 3802 4.956085 TGTAATGAGTAACGATCCATGGG 58.044 43.478 13.02 0.00 0.00 4.00
1566 3829 3.953775 CACCAACCTCCCTGCGGT 61.954 66.667 0.00 0.00 35.97 5.68
1642 3906 4.493057 CGCTACGAATCGTACTGTTAGTCA 60.493 45.833 11.84 0.00 41.54 3.41
3340 5692 0.396435 ACAAGAACACATCTCCGCCA 59.604 50.000 0.00 0.00 37.42 5.69
3350 5883 3.300009 CTTGAATGGCGAACAAGAACAC 58.700 45.455 11.46 0.00 42.12 3.32
3572 6112 2.103771 CCTACTCATGCACTGCCTACAT 59.896 50.000 0.00 0.00 0.00 2.29
3578 6118 4.623814 TGCCTACTCATGCACTGC 57.376 55.556 0.00 0.00 31.31 4.40
3617 6157 8.542926 TGGGTAGATGGATGAATGATTGTATAG 58.457 37.037 0.00 0.00 0.00 1.31
3618 6158 8.448068 TGGGTAGATGGATGAATGATTGTATA 57.552 34.615 0.00 0.00 0.00 1.47
3619 6159 7.017950 ACTGGGTAGATGGATGAATGATTGTAT 59.982 37.037 0.00 0.00 0.00 2.29
3637 6177 1.218316 GAAGTGCCGGACTGGGTAG 59.782 63.158 5.05 0.00 38.63 3.18
3661 6201 3.120854 CGAGAACAAAAGCTAGTGCAGTC 60.121 47.826 0.00 0.00 42.74 3.51
3688 6256 0.442310 CAAGTGTGGTTGATACGGCG 59.558 55.000 4.80 4.80 0.00 6.46
3709 6277 4.942761 AGGTTGTCACAATTTCAAGCAT 57.057 36.364 0.00 0.00 40.52 3.79
3710 6278 4.159321 TGAAGGTTGTCACAATTTCAAGCA 59.841 37.500 14.61 0.00 40.52 3.91
3711 6279 4.681744 TGAAGGTTGTCACAATTTCAAGC 58.318 39.130 14.61 0.00 39.05 4.01
3712 6280 6.979817 TGATTGAAGGTTGTCACAATTTCAAG 59.020 34.615 24.99 0.00 35.01 3.02
3729 6298 6.412943 CCGATCGATCACAAAATTGATTGAAG 59.587 38.462 24.40 2.54 45.54 3.02
3769 6338 9.458374 TTGTGCTTTCAAATTTAAGTTACTAGC 57.542 29.630 0.00 0.00 0.00 3.42
3771 6340 9.440784 CGTTGTGCTTTCAAATTTAAGTTACTA 57.559 29.630 0.00 0.00 0.00 1.82
3772 6341 8.185505 TCGTTGTGCTTTCAAATTTAAGTTACT 58.814 29.630 0.00 0.00 0.00 2.24
3773 6342 8.257166 GTCGTTGTGCTTTCAAATTTAAGTTAC 58.743 33.333 0.00 0.00 0.00 2.50
3836 6405 6.477033 CGATCCAAAAGTAGTAGGTGAATCTG 59.523 42.308 0.00 0.00 0.00 2.90
3911 6480 3.206150 AGTACCACATTCGATGATTGCC 58.794 45.455 0.00 0.00 0.00 4.52
3940 6509 1.745489 GCGGTGGAGTTGGCCTAAG 60.745 63.158 3.32 0.00 0.00 2.18
3942 6511 2.463589 CTTGCGGTGGAGTTGGCCTA 62.464 60.000 3.32 0.00 0.00 3.93
3980 6549 2.688958 CTGTTTTACCCCAAACGGACAA 59.311 45.455 0.00 0.00 43.22 3.18
4000 6569 2.052047 CTGGGTCGTGGGGTTTGTCT 62.052 60.000 0.00 0.00 0.00 3.41
4089 6658 1.512694 CTTTCGCCCCAAATCCAGC 59.487 57.895 0.00 0.00 0.00 4.85
4210 6791 4.081586 GTGGGTAGGTCGAAGAGAGAAAAT 60.082 45.833 0.00 0.00 36.95 1.82
4221 6802 0.813184 GATGTTCGTGGGTAGGTCGA 59.187 55.000 0.00 0.00 0.00 4.20
4235 6816 1.213537 GCCGTTGCATGCAGATGTT 59.786 52.632 21.50 0.00 37.47 2.71
4239 6820 3.120385 CTCGCCGTTGCATGCAGA 61.120 61.111 21.50 13.15 37.32 4.26
4961 7542 2.491022 CCTCCTCGCCCCTAACTCG 61.491 68.421 0.00 0.00 0.00 4.18
4962 7543 2.798364 GCCTCCTCGCCCCTAACTC 61.798 68.421 0.00 0.00 0.00 3.01
4963 7544 2.764547 GCCTCCTCGCCCCTAACT 60.765 66.667 0.00 0.00 0.00 2.24
4964 7545 4.222847 CGCCTCCTCGCCCCTAAC 62.223 72.222 0.00 0.00 0.00 2.34
5105 8944 1.686110 ACGTAGGAGGCAGGGAAGG 60.686 63.158 0.00 0.00 0.00 3.46
5156 8995 1.821216 CGCACCCCATATTATGTCCC 58.179 55.000 3.10 0.00 0.00 4.46
5190 9029 2.434884 CTTGCGGCGTCCTGATGT 60.435 61.111 9.37 0.00 0.00 3.06
5316 10518 1.149627 GGTGTGCAGTACCCACCAA 59.850 57.895 16.35 0.00 46.33 3.67
5361 10563 2.124983 CTCATGGTCACCCCGCTG 60.125 66.667 0.00 0.00 35.15 5.18
5687 10927 1.207089 CCGAAGAAGTACTCCATGCCA 59.793 52.381 0.00 0.00 0.00 4.92
5729 10969 3.774599 ATTCTCCCGCCAATCCCGC 62.775 63.158 0.00 0.00 0.00 6.13
5730 10970 1.893808 CATTCTCCCGCCAATCCCG 60.894 63.158 0.00 0.00 0.00 5.14
5732 10972 2.196245 GCCATTCTCCCGCCAATCC 61.196 63.158 0.00 0.00 0.00 3.01
5733 10973 2.546494 CGCCATTCTCCCGCCAATC 61.546 63.158 0.00 0.00 0.00 2.67
5734 10974 2.516930 CGCCATTCTCCCGCCAAT 60.517 61.111 0.00 0.00 0.00 3.16
5773 11024 2.147150 GCCGCTTTTTCTCACTTCTCT 58.853 47.619 0.00 0.00 0.00 3.10
5792 11043 2.962697 TTTTCCCGCCGTTTTGCTGC 62.963 55.000 0.00 0.00 0.00 5.25
5793 11044 0.939106 CTTTTCCCGCCGTTTTGCTG 60.939 55.000 0.00 0.00 0.00 4.41
5795 11046 1.663388 CCTTTTCCCGCCGTTTTGC 60.663 57.895 0.00 0.00 0.00 3.68
5915 11166 3.253955 CGGCTCGGACCAAAACTG 58.746 61.111 0.00 0.00 0.00 3.16
5931 11182 1.268845 CCAGAAACCCGTTTTTCACCG 60.269 52.381 8.28 0.00 37.86 4.94
5934 11185 2.303175 CCTCCAGAAACCCGTTTTTCA 58.697 47.619 8.28 0.00 37.86 2.69
5945 11196 2.048222 CAGTCGCGCCTCCAGAAA 60.048 61.111 0.00 0.00 0.00 2.52
5988 11239 2.203070 CCTCCCCAGGCGATTTCG 60.203 66.667 0.00 0.00 43.27 3.46
5989 11240 2.193248 CCCTCCCCAGGCGATTTC 59.807 66.667 0.00 0.00 38.72 2.17
5990 11241 4.129148 GCCCTCCCCAGGCGATTT 62.129 66.667 0.00 0.00 41.41 2.17
5996 11247 4.052518 CAACAGGCCCTCCCCAGG 62.053 72.222 0.00 0.00 39.98 4.45
5997 11248 4.052518 CCAACAGGCCCTCCCCAG 62.053 72.222 0.00 0.00 0.00 4.45
6022 11273 3.071602 TGAGTAATAAGGGCATCTCCAGC 59.928 47.826 0.00 0.00 36.21 4.85
6023 11274 4.101585 TGTGAGTAATAAGGGCATCTCCAG 59.898 45.833 0.00 0.00 36.21 3.86
6024 11275 4.037222 TGTGAGTAATAAGGGCATCTCCA 58.963 43.478 0.00 0.00 36.21 3.86
6025 11276 4.381411 GTGTGAGTAATAAGGGCATCTCC 58.619 47.826 0.00 0.00 0.00 3.71
6026 11277 4.051922 CGTGTGAGTAATAAGGGCATCTC 58.948 47.826 0.00 0.00 0.00 2.75
6027 11278 3.704566 TCGTGTGAGTAATAAGGGCATCT 59.295 43.478 0.00 0.00 0.00 2.90
6028 11279 4.054780 TCGTGTGAGTAATAAGGGCATC 57.945 45.455 0.00 0.00 0.00 3.91
6029 11280 4.189231 GTTCGTGTGAGTAATAAGGGCAT 58.811 43.478 0.00 0.00 0.00 4.40
6030 11281 3.007074 TGTTCGTGTGAGTAATAAGGGCA 59.993 43.478 0.00 0.00 0.00 5.36
6031 11282 3.592059 TGTTCGTGTGAGTAATAAGGGC 58.408 45.455 0.00 0.00 0.00 5.19
6032 11283 5.068234 TCTGTTCGTGTGAGTAATAAGGG 57.932 43.478 0.00 0.00 0.00 3.95
6033 11284 5.573282 CACTCTGTTCGTGTGAGTAATAAGG 59.427 44.000 0.00 0.00 38.80 2.69
6114 11394 8.164070 AGGTTTGACTTTGGAGTGAATAATACT 58.836 33.333 0.00 0.00 35.88 2.12
6115 11395 8.237267 CAGGTTTGACTTTGGAGTGAATAATAC 58.763 37.037 0.00 0.00 35.88 1.89
6116 11396 7.094377 GCAGGTTTGACTTTGGAGTGAATAATA 60.094 37.037 0.00 0.00 35.88 0.98
6117 11397 6.294731 GCAGGTTTGACTTTGGAGTGAATAAT 60.295 38.462 0.00 0.00 35.88 1.28
6118 11398 5.009610 GCAGGTTTGACTTTGGAGTGAATAA 59.990 40.000 0.00 0.00 35.88 1.40
6119 11399 4.518970 GCAGGTTTGACTTTGGAGTGAATA 59.481 41.667 0.00 0.00 35.88 1.75
6120 11400 3.319122 GCAGGTTTGACTTTGGAGTGAAT 59.681 43.478 0.00 0.00 35.88 2.57
6121 11401 2.687935 GCAGGTTTGACTTTGGAGTGAA 59.312 45.455 0.00 0.00 35.88 3.18
6122 11402 2.297701 GCAGGTTTGACTTTGGAGTGA 58.702 47.619 0.00 0.00 35.88 3.41
6123 11403 2.023673 TGCAGGTTTGACTTTGGAGTG 58.976 47.619 0.00 0.00 35.88 3.51
6124 11404 2.435372 TGCAGGTTTGACTTTGGAGT 57.565 45.000 0.00 0.00 39.32 3.85
6125 11405 2.608752 GCATGCAGGTTTGACTTTGGAG 60.609 50.000 14.21 0.00 0.00 3.86
6126 11406 1.340889 GCATGCAGGTTTGACTTTGGA 59.659 47.619 14.21 0.00 0.00 3.53
6127 11407 1.068895 TGCATGCAGGTTTGACTTTGG 59.931 47.619 18.46 0.00 0.00 3.28
6128 11408 2.512485 TGCATGCAGGTTTGACTTTG 57.488 45.000 18.46 0.00 0.00 2.77
6129 11409 3.034721 CATGCATGCAGGTTTGACTTT 57.965 42.857 26.69 1.43 0.00 2.66
6130 11410 2.736144 CATGCATGCAGGTTTGACTT 57.264 45.000 26.69 2.26 0.00 3.01
6196 11476 5.586877 TGGTAATCCTTGTAGTACTCCACT 58.413 41.667 0.00 0.00 36.58 4.00
6364 11644 1.166129 CGAGGAAGTCGGAGAACTCA 58.834 55.000 4.23 0.00 45.58 3.41
6757 12037 1.048601 AGAAGAGGAACTTGTCGGCA 58.951 50.000 0.00 0.00 41.55 5.69
6790 12070 1.006571 GTTCACCTTCTGCGTCGGA 60.007 57.895 0.00 0.00 0.00 4.55
6793 12073 2.027625 CCGGTTCACCTTCTGCGTC 61.028 63.158 0.00 0.00 0.00 5.19
6956 12237 1.901650 GCGCGACAAGTTCCTTCTGG 61.902 60.000 12.10 0.00 0.00 3.86
6981 12262 3.062763 CAGAAGTCGAAGTGCTGTCATT 58.937 45.455 0.00 0.00 0.00 2.57
6991 12272 1.080501 TCCGCTGCAGAAGTCGAAG 60.081 57.895 20.43 0.00 0.00 3.79
6998 12279 1.004560 CCTTCAGTCCGCTGCAGAA 60.005 57.895 20.43 0.00 38.06 3.02
7042 12352 2.949106 CAGGGTGTTGCAAGCTCG 59.051 61.111 0.00 0.00 0.00 5.03
7045 12355 3.595758 ACGCAGGGTGTTGCAAGC 61.596 61.111 0.00 0.00 44.28 4.01
7142 12455 2.827800 GATGGCTCGATCATTCTCCA 57.172 50.000 3.42 0.00 0.00 3.86
7157 12471 6.920758 AGTTCGATCTAATTTCTCTTCGATGG 59.079 38.462 0.00 0.00 35.77 3.51
7191 12515 0.601558 GTAGGTGAGGAAGCGTGTGA 59.398 55.000 0.00 0.00 0.00 3.58
7193 12517 1.542187 GGGTAGGTGAGGAAGCGTGT 61.542 60.000 0.00 0.00 0.00 4.49
7195 12519 1.988406 GGGGTAGGTGAGGAAGCGT 60.988 63.158 0.00 0.00 0.00 5.07
7196 12520 2.732619 GGGGGTAGGTGAGGAAGCG 61.733 68.421 0.00 0.00 0.00 4.68
7197 12521 0.914902 AAGGGGGTAGGTGAGGAAGC 60.915 60.000 0.00 0.00 0.00 3.86
7198 12522 1.205055 GAAGGGGGTAGGTGAGGAAG 58.795 60.000 0.00 0.00 0.00 3.46
7199 12523 0.797579 AGAAGGGGGTAGGTGAGGAA 59.202 55.000 0.00 0.00 0.00 3.36
7292 12626 2.571757 CAGCGGCGAGGTAGTGAA 59.428 61.111 12.98 0.00 0.00 3.18
7293 12627 4.129737 GCAGCGGCGAGGTAGTGA 62.130 66.667 12.98 0.00 0.00 3.41
7337 12672 1.003812 CTGACCCGGTGGATTTTACCA 59.996 52.381 0.00 0.00 38.11 3.25
7392 12728 1.941999 AATCGACCGAACCCCGAGTC 61.942 60.000 0.00 0.00 41.76 3.36
7393 12729 1.538687 AAATCGACCGAACCCCGAGT 61.539 55.000 0.00 0.00 41.76 4.18
7505 12847 1.883926 TCGACGGATGACTGTCTTGAA 59.116 47.619 9.51 0.00 46.70 2.69
7513 12855 2.088180 GTCGAGTCGACGGATGACT 58.912 57.895 28.20 6.22 46.56 3.41
7522 12864 3.304764 CTGGTTCGCGTCGAGTCGA 62.305 63.158 12.09 12.09 37.14 4.20
7525 12867 1.081376 CTTCTGGTTCGCGTCGAGT 60.081 57.895 5.77 0.00 37.14 4.18
7563 12905 4.434520 GTTATTGTAGGAGAGCTGTGTCC 58.565 47.826 0.00 0.00 36.29 4.02
7567 12909 3.452627 CCTGGTTATTGTAGGAGAGCTGT 59.547 47.826 0.00 0.00 33.33 4.40
7713 13055 3.665675 GAGTCCGCGGTGGCTCAAT 62.666 63.158 27.15 2.78 39.37 2.57
7845 13189 3.785859 GTGATCAGCAGCGGGGGA 61.786 66.667 0.00 0.00 0.00 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.