Multiple sequence alignment - TraesCS6B01G197800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G197800 chr6B 100.000 1827 0 0 1 1827 236481477 236483303 0.000000e+00 3374
1 TraesCS6B01G197800 chr6B 100.000 315 0 0 2052 2366 236483528 236483842 1.220000e-162 582
2 TraesCS6B01G197800 chr6B 99.683 315 1 0 2052 2366 316403026 316402712 5.670000e-161 577
3 TraesCS6B01G197800 chr6B 99.365 315 2 0 2052 2366 232600468 232600154 2.640000e-159 571
4 TraesCS6B01G197800 chr6B 99.365 315 2 0 2052 2366 418101450 418101136 2.640000e-159 571
5 TraesCS6B01G197800 chr6B 99.365 315 2 0 2052 2366 500730248 500730562 2.640000e-159 571
6 TraesCS6B01G197800 chr6B 94.771 306 13 3 1523 1827 476918294 476917991 7.650000e-130 473
7 TraesCS6B01G197800 chrUn 95.328 1541 52 7 1 1537 233526163 233524639 0.000000e+00 2429
8 TraesCS6B01G197800 chrUn 95.328 1541 52 7 1 1537 257943217 257944741 0.000000e+00 2429
9 TraesCS6B01G197800 chr4D 95.068 1541 57 6 1 1537 123688066 123689591 0.000000e+00 2407
10 TraesCS6B01G197800 chr4D 93.900 1541 72 8 1 1537 241052812 241054334 0.000000e+00 2305
11 TraesCS6B01G197800 chr2D 94.744 1541 61 7 1 1537 637309600 637308076 0.000000e+00 2379
12 TraesCS6B01G197800 chr2D 94.614 1541 61 7 1 1537 17983477 17984999 0.000000e+00 2366
13 TraesCS6B01G197800 chr2D 94.423 1542 61 11 1 1537 306151992 306153513 0.000000e+00 2348
14 TraesCS6B01G197800 chr2D 97.015 268 8 0 1270 1537 200957764 200957497 3.590000e-123 451
15 TraesCS6B01G197800 chr6D 94.293 1542 68 7 1 1537 283186517 283188043 0.000000e+00 2342
16 TraesCS6B01G197800 chr6D 92.947 397 13 3 1141 1537 108462055 108461674 4.410000e-157 564
17 TraesCS6B01G197800 chr1D 95.908 1442 40 6 100 1537 212428072 212429498 0.000000e+00 2318
18 TraesCS6B01G197800 chr7A 95.251 1474 51 6 68 1537 60097027 60095569 0.000000e+00 2316
19 TraesCS6B01G197800 chr4B 94.030 1541 71 8 1 1537 495538669 495537146 0.000000e+00 2316
20 TraesCS6B01G197800 chr4B 99.365 315 2 0 2052 2366 451402231 451401917 2.640000e-159 571
21 TraesCS6B01G197800 chr4B 97.251 291 7 1 1538 1827 180737105 180736815 2.110000e-135 492
22 TraesCS6B01G197800 chr5B 94.973 1472 55 6 70 1537 713094938 713096394 0.000000e+00 2290
23 TraesCS6B01G197800 chr5B 96.897 290 8 1 1538 1827 102704366 102704654 3.540000e-133 484
24 TraesCS6B01G197800 chr5B 96.897 290 8 1 1538 1827 385563135 385562847 3.540000e-133 484
25 TraesCS6B01G197800 chr5B 96.907 291 6 3 1538 1827 540105662 540105950 3.540000e-133 484
26 TraesCS6B01G197800 chr7D 95.779 1232 34 5 309 1537 578990179 578991395 0.000000e+00 1971
27 TraesCS6B01G197800 chr3B 99.683 315 1 0 2052 2366 198274133 198273819 5.670000e-161 577
28 TraesCS6B01G197800 chr3B 99.683 315 1 0 2052 2366 198279618 198279304 5.670000e-161 577
29 TraesCS6B01G197800 chr3B 96.897 290 7 1 1538 1827 423009209 423009496 3.540000e-133 484
30 TraesCS6B01G197800 chr2B 99.365 315 2 0 2052 2366 355642465 355642151 2.640000e-159 571
31 TraesCS6B01G197800 chr2B 96.897 290 9 0 1538 1827 275934621 275934332 9.830000e-134 486
32 TraesCS6B01G197800 chr2B 96.897 290 7 1 1538 1827 38306106 38306393 3.540000e-133 484
33 TraesCS6B01G197800 chr1B 99.365 315 2 0 2052 2366 226005769 226006083 2.640000e-159 571
34 TraesCS6B01G197800 chr7B 96.220 291 11 0 1537 1827 117344316 117344026 5.920000e-131 477


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G197800 chr6B 236481477 236483842 2365 False 1978 3374 100.000 1 2366 2 chr6B.!!$F2 2365
1 TraesCS6B01G197800 chrUn 233524639 233526163 1524 True 2429 2429 95.328 1 1537 1 chrUn.!!$R1 1536
2 TraesCS6B01G197800 chrUn 257943217 257944741 1524 False 2429 2429 95.328 1 1537 1 chrUn.!!$F1 1536
3 TraesCS6B01G197800 chr4D 123688066 123689591 1525 False 2407 2407 95.068 1 1537 1 chr4D.!!$F1 1536
4 TraesCS6B01G197800 chr4D 241052812 241054334 1522 False 2305 2305 93.900 1 1537 1 chr4D.!!$F2 1536
5 TraesCS6B01G197800 chr2D 637308076 637309600 1524 True 2379 2379 94.744 1 1537 1 chr2D.!!$R2 1536
6 TraesCS6B01G197800 chr2D 17983477 17984999 1522 False 2366 2366 94.614 1 1537 1 chr2D.!!$F1 1536
7 TraesCS6B01G197800 chr2D 306151992 306153513 1521 False 2348 2348 94.423 1 1537 1 chr2D.!!$F2 1536
8 TraesCS6B01G197800 chr6D 283186517 283188043 1526 False 2342 2342 94.293 1 1537 1 chr6D.!!$F1 1536
9 TraesCS6B01G197800 chr1D 212428072 212429498 1426 False 2318 2318 95.908 100 1537 1 chr1D.!!$F1 1437
10 TraesCS6B01G197800 chr7A 60095569 60097027 1458 True 2316 2316 95.251 68 1537 1 chr7A.!!$R1 1469
11 TraesCS6B01G197800 chr4B 495537146 495538669 1523 True 2316 2316 94.030 1 1537 1 chr4B.!!$R3 1536
12 TraesCS6B01G197800 chr5B 713094938 713096394 1456 False 2290 2290 94.973 70 1537 1 chr5B.!!$F3 1467
13 TraesCS6B01G197800 chr7D 578990179 578991395 1216 False 1971 1971 95.779 309 1537 1 chr7D.!!$F1 1228

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.459585 GTAAGTGCTCCGAATCCGCA 60.46 55.0 0.0 0.0 0.0 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1748 1757 0.035598 TCCAAAAATCACGCCCTCGA 59.964 50.0 0.0 0.0 39.41 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.448119 GCTATCAGCCGAAAAGCCCC 61.448 60.000 0.00 0.00 34.48 5.80
57 58 0.529992 CCCGTAAGTGCTCCGAATCC 60.530 60.000 0.00 0.00 0.00 3.01
60 61 0.459585 GTAAGTGCTCCGAATCCGCA 60.460 55.000 0.00 0.00 0.00 5.69
114 115 6.863126 GCCATTTACCCAATAATTGATCTTCG 59.137 38.462 0.00 0.00 0.00 3.79
221 223 4.472108 TGTTACGAATAAGGGAGGTGGAAT 59.528 41.667 0.00 0.00 0.00 3.01
316 318 7.466804 ACAAATAGGTGGTCTTTCTGGAAATA 58.533 34.615 0.00 0.00 0.00 1.40
344 346 2.393271 AAGTTCTTCCCTCGCATCTG 57.607 50.000 0.00 0.00 0.00 2.90
369 371 8.130469 TGGGTCACTTTTACTTTTTCGTTATTC 58.870 33.333 0.00 0.00 0.00 1.75
482 485 5.797934 GCATTACGATCGTTGGATTTCAAAA 59.202 36.000 27.88 10.62 37.08 2.44
670 676 0.817654 GGGTTTGCTTGGACTATGCC 59.182 55.000 0.00 0.00 0.00 4.40
710 716 8.682936 TTTTCTATTTCATAGGAGATCTTGGC 57.317 34.615 0.00 0.00 33.64 4.52
753 759 4.476628 TTAACCGGTCTGGAATTAGGTC 57.523 45.455 8.04 0.00 42.00 3.85
868 874 4.258543 TGAATAAAAACGAGGAGCCGAAT 58.741 39.130 0.00 0.00 0.00 3.34
933 939 4.141779 GGTTCCGGGTACTCAAGATATTGT 60.142 45.833 0.00 0.00 0.00 2.71
936 942 4.098960 TCCGGGTACTCAAGATATTGTGTC 59.901 45.833 10.77 4.26 31.94 3.67
970 978 4.101741 GGTGTAGATTGTAGATTCCAGCCT 59.898 45.833 0.00 0.00 0.00 4.58
979 987 2.035632 AGATTCCAGCCTAGAAGACCG 58.964 52.381 0.00 0.00 0.00 4.79
1080 1088 4.183101 CAAAAATGGATGGAATTGGACCG 58.817 43.478 0.00 0.00 0.00 4.79
1095 1104 1.616374 GGACCGGAAAAAGCCATTCAA 59.384 47.619 9.46 0.00 0.00 2.69
1143 1152 5.649395 TGGGAACATCAAGATGAATGAGTTC 59.351 40.000 16.39 8.27 41.20 3.01
1159 1168 9.194972 TGAATGAGTTCACTAAGTATCAGATCT 57.805 33.333 0.00 0.00 39.36 2.75
1198 1207 8.510243 AATGATAGTGCAAGATCATGTTGTTA 57.490 30.769 19.98 0.00 41.00 2.41
1219 1228 4.418395 AATTGGGAATTGAAGAGGGGAA 57.582 40.909 0.00 0.00 0.00 3.97
1277 1286 3.121795 CGTTATCGTGGAATTCGTCATCG 60.122 47.826 0.00 0.42 38.55 3.84
1278 1287 2.579207 ATCGTGGAATTCGTCATCGT 57.421 45.000 0.00 0.00 38.33 3.73
1279 1288 1.624487 TCGTGGAATTCGTCATCGTG 58.376 50.000 0.00 0.00 38.33 4.35
1280 1289 0.645355 CGTGGAATTCGTCATCGTGG 59.355 55.000 0.00 0.00 38.33 4.94
1281 1290 1.734377 CGTGGAATTCGTCATCGTGGA 60.734 52.381 0.00 0.00 38.33 4.02
1282 1291 2.343101 GTGGAATTCGTCATCGTGGAA 58.657 47.619 0.00 0.00 38.33 3.53
1283 1292 2.936498 GTGGAATTCGTCATCGTGGAAT 59.064 45.455 0.00 0.00 38.33 3.01
1284 1293 3.374058 GTGGAATTCGTCATCGTGGAATT 59.626 43.478 0.00 0.00 41.62 2.17
1285 1294 4.006989 TGGAATTCGTCATCGTGGAATTT 58.993 39.130 0.00 0.00 39.69 1.82
1286 1295 4.142708 TGGAATTCGTCATCGTGGAATTTG 60.143 41.667 0.00 0.00 39.69 2.32
1287 1296 4.142687 GGAATTCGTCATCGTGGAATTTGT 60.143 41.667 0.00 0.00 39.69 2.83
1288 1297 4.600012 ATTCGTCATCGTGGAATTTGTC 57.400 40.909 0.00 0.00 38.33 3.18
1289 1298 3.033368 TCGTCATCGTGGAATTTGTCA 57.967 42.857 0.00 0.00 38.33 3.58
1290 1299 3.595173 TCGTCATCGTGGAATTTGTCAT 58.405 40.909 0.00 0.00 38.33 3.06
1291 1300 3.616821 TCGTCATCGTGGAATTTGTCATC 59.383 43.478 0.00 0.00 38.33 2.92
1294 1303 5.447683 CGTCATCGTGGAATTTGTCATCAAT 60.448 40.000 0.00 0.00 33.32 2.57
1466 1475 5.934625 GGTACTTGTCTGATCAATCACACTT 59.065 40.000 0.00 0.00 32.50 3.16
1469 1478 7.338800 ACTTGTCTGATCAATCACACTTTTT 57.661 32.000 0.00 0.00 32.50 1.94
1537 1546 9.902684 ACTAATCACGTATACATATAGTAGGCT 57.097 33.333 3.32 0.00 35.85 4.58
1539 1548 8.803397 AATCACGTATACATATAGTAGGCTGA 57.197 34.615 3.32 0.00 35.85 4.26
1540 1549 8.982091 ATCACGTATACATATAGTAGGCTGAT 57.018 34.615 3.32 0.00 35.85 2.90
1544 1553 9.848710 ACGTATACATATAGTAGGCTGATATGT 57.151 33.333 23.41 23.41 44.80 2.29
1548 1557 7.889873 ACATATAGTAGGCTGATATGTCTCC 57.110 40.000 18.36 0.00 40.95 3.71
1549 1558 7.414266 ACATATAGTAGGCTGATATGTCTCCA 58.586 38.462 18.36 0.00 40.95 3.86
1550 1559 7.895962 ACATATAGTAGGCTGATATGTCTCCAA 59.104 37.037 18.36 0.00 40.95 3.53
1551 1560 4.946478 AGTAGGCTGATATGTCTCCAAC 57.054 45.455 0.00 0.00 0.00 3.77
1552 1561 2.898729 AGGCTGATATGTCTCCAACG 57.101 50.000 0.00 0.00 0.00 4.10
1553 1562 2.111384 AGGCTGATATGTCTCCAACGT 58.889 47.619 0.00 0.00 0.00 3.99
1554 1563 3.296854 AGGCTGATATGTCTCCAACGTA 58.703 45.455 0.00 0.00 33.91 3.57
1555 1564 3.898123 AGGCTGATATGTCTCCAACGTAT 59.102 43.478 0.00 0.00 41.77 3.06
1593 1602 8.823220 ATTGTTCCATGCTATTATATTACCCC 57.177 34.615 0.00 0.00 0.00 4.95
1594 1603 7.582909 TGTTCCATGCTATTATATTACCCCT 57.417 36.000 0.00 0.00 0.00 4.79
1595 1604 7.995663 TGTTCCATGCTATTATATTACCCCTT 58.004 34.615 0.00 0.00 0.00 3.95
1596 1605 8.452868 TGTTCCATGCTATTATATTACCCCTTT 58.547 33.333 0.00 0.00 0.00 3.11
1597 1606 9.309224 GTTCCATGCTATTATATTACCCCTTTT 57.691 33.333 0.00 0.00 0.00 2.27
1610 1619 9.822727 ATATTACCCCTTTTAGATGTTTATGGG 57.177 33.333 0.00 0.00 36.56 4.00
1611 1620 4.286707 ACCCCTTTTAGATGTTTATGGGC 58.713 43.478 0.00 0.00 33.69 5.36
1612 1621 4.016572 ACCCCTTTTAGATGTTTATGGGCT 60.017 41.667 0.00 0.00 33.69 5.19
1613 1622 4.962362 CCCCTTTTAGATGTTTATGGGCTT 59.038 41.667 0.00 0.00 32.48 4.35
1614 1623 5.425217 CCCCTTTTAGATGTTTATGGGCTTT 59.575 40.000 0.00 0.00 32.48 3.51
1615 1624 6.609616 CCCCTTTTAGATGTTTATGGGCTTTA 59.390 38.462 0.00 0.00 32.48 1.85
1616 1625 7.290014 CCCCTTTTAGATGTTTATGGGCTTTAT 59.710 37.037 0.00 0.00 32.48 1.40
1617 1626 8.704668 CCCTTTTAGATGTTTATGGGCTTTATT 58.295 33.333 0.00 0.00 0.00 1.40
1624 1633 9.030452 AGATGTTTATGGGCTTTATTTTACACA 57.970 29.630 0.00 0.00 0.00 3.72
1625 1634 9.816354 GATGTTTATGGGCTTTATTTTACACAT 57.184 29.630 0.00 0.00 0.00 3.21
1655 1664 8.803397 ATCATTTTTGGGACTAACCTACTAAC 57.197 34.615 0.00 0.00 38.98 2.34
1656 1665 7.170277 TCATTTTTGGGACTAACCTACTAACC 58.830 38.462 0.00 0.00 38.98 2.85
1657 1666 4.806640 TTTGGGACTAACCTACTAACCG 57.193 45.455 0.00 0.00 38.98 4.44
1658 1667 2.738743 TGGGACTAACCTACTAACCGG 58.261 52.381 0.00 0.00 38.98 5.28
1659 1668 2.311542 TGGGACTAACCTACTAACCGGA 59.688 50.000 9.46 0.00 38.98 5.14
1660 1669 2.954989 GGGACTAACCTACTAACCGGAG 59.045 54.545 9.46 0.00 38.98 4.63
1661 1670 2.954989 GGACTAACCTACTAACCGGAGG 59.045 54.545 9.46 6.51 45.59 4.30
1662 1671 4.805044 GGACTAACCTACTAACCGGAGGC 61.805 56.522 9.46 0.00 44.44 4.70
1677 1686 2.199535 GGCCCAGCCCATATTGCT 59.800 61.111 0.00 0.00 44.06 3.91
1708 1717 8.964420 TTTTTGCCTATTTCAGTATTTCGAAG 57.036 30.769 0.00 0.00 0.00 3.79
1709 1718 7.915293 TTTGCCTATTTCAGTATTTCGAAGA 57.085 32.000 0.00 0.00 0.00 2.87
1710 1719 7.915293 TTGCCTATTTCAGTATTTCGAAGAA 57.085 32.000 0.00 0.00 45.90 2.52
1711 1720 7.915293 TGCCTATTTCAGTATTTCGAAGAAA 57.085 32.000 10.72 10.72 45.90 2.52
1712 1721 8.330466 TGCCTATTTCAGTATTTCGAAGAAAA 57.670 30.769 11.92 3.47 45.90 2.29
1713 1722 8.450964 TGCCTATTTCAGTATTTCGAAGAAAAG 58.549 33.333 11.92 10.48 45.90 2.27
1714 1723 7.910683 GCCTATTTCAGTATTTCGAAGAAAAGG 59.089 37.037 19.62 19.62 45.90 3.11
1715 1724 9.162764 CCTATTTCAGTATTTCGAAGAAAAGGA 57.837 33.333 19.44 7.37 45.90 3.36
1721 1730 9.884636 TCAGTATTTCGAAGAAAAGGAATATCA 57.115 29.630 0.00 0.00 45.90 2.15
1725 1734 8.895932 ATTTCGAAGAAAAGGAATATCAAACG 57.104 30.769 0.00 0.00 45.90 3.60
1726 1735 6.417191 TCGAAGAAAAGGAATATCAAACGG 57.583 37.500 0.00 0.00 0.00 4.44
1727 1736 6.167685 TCGAAGAAAAGGAATATCAAACGGA 58.832 36.000 0.00 0.00 0.00 4.69
1728 1737 6.312918 TCGAAGAAAAGGAATATCAAACGGAG 59.687 38.462 0.00 0.00 0.00 4.63
1730 1739 6.986904 AGAAAAGGAATATCAAACGGAGTC 57.013 37.500 0.00 0.00 45.00 3.36
1731 1740 5.880887 AGAAAAGGAATATCAAACGGAGTCC 59.119 40.000 0.00 0.00 45.00 3.85
1732 1741 4.837093 AAGGAATATCAAACGGAGTCCA 57.163 40.909 10.49 0.00 45.00 4.02
1733 1742 4.837093 AGGAATATCAAACGGAGTCCAA 57.163 40.909 10.49 0.00 45.00 3.53
1734 1743 5.174037 AGGAATATCAAACGGAGTCCAAA 57.826 39.130 10.49 0.00 45.00 3.28
1735 1744 4.941873 AGGAATATCAAACGGAGTCCAAAC 59.058 41.667 10.49 0.00 45.00 2.93
1736 1745 4.201783 GGAATATCAAACGGAGTCCAAACG 60.202 45.833 10.49 0.00 45.00 3.60
1737 1746 1.519408 ATCAAACGGAGTCCAAACGG 58.481 50.000 10.49 0.00 45.00 4.44
1738 1747 0.464870 TCAAACGGAGTCCAAACGGA 59.535 50.000 10.49 0.00 45.00 4.69
1739 1748 1.134461 TCAAACGGAGTCCAAACGGAA 60.134 47.619 10.49 0.00 45.00 4.30
1740 1749 1.877443 CAAACGGAGTCCAAACGGAAT 59.123 47.619 10.49 0.00 45.00 3.01
1741 1750 1.519408 AACGGAGTCCAAACGGAATG 58.481 50.000 10.49 0.00 45.00 2.67
1742 1751 0.682852 ACGGAGTCCAAACGGAATGA 59.317 50.000 10.49 0.00 29.74 2.57
1743 1752 1.071071 ACGGAGTCCAAACGGAATGAA 59.929 47.619 10.49 0.00 29.74 2.57
1744 1753 2.147958 CGGAGTCCAAACGGAATGAAA 58.852 47.619 10.49 0.00 33.16 2.69
1745 1754 2.095919 CGGAGTCCAAACGGAATGAAAC 60.096 50.000 10.49 0.00 33.16 2.78
1746 1755 2.228103 GGAGTCCAAACGGAATGAAACC 59.772 50.000 3.60 0.00 33.16 3.27
1747 1756 3.146847 GAGTCCAAACGGAATGAAACCT 58.853 45.455 0.00 0.00 33.16 3.50
1748 1757 3.562182 AGTCCAAACGGAATGAAACCTT 58.438 40.909 0.00 0.00 33.16 3.50
1749 1758 3.568430 AGTCCAAACGGAATGAAACCTTC 59.432 43.478 0.00 0.00 33.16 3.46
1750 1759 2.550606 TCCAAACGGAATGAAACCTTCG 59.449 45.455 0.00 0.00 0.00 3.79
1751 1760 2.550606 CCAAACGGAATGAAACCTTCGA 59.449 45.455 0.00 0.00 0.00 3.71
1752 1761 3.364964 CCAAACGGAATGAAACCTTCGAG 60.365 47.826 0.00 0.00 0.00 4.04
1753 1762 2.094762 ACGGAATGAAACCTTCGAGG 57.905 50.000 0.00 0.03 42.49 4.63
1754 1763 1.338769 ACGGAATGAAACCTTCGAGGG 60.339 52.381 12.81 12.81 40.58 4.30
1755 1764 1.095600 GGAATGAAACCTTCGAGGGC 58.904 55.000 14.47 0.00 40.58 5.19
1756 1765 0.727398 GAATGAAACCTTCGAGGGCG 59.273 55.000 14.47 0.00 40.58 6.13
1757 1766 0.036306 AATGAAACCTTCGAGGGCGT 59.964 50.000 14.47 0.69 40.58 5.68
1758 1767 0.673644 ATGAAACCTTCGAGGGCGTG 60.674 55.000 14.47 0.00 40.58 5.34
1759 1768 1.005394 GAAACCTTCGAGGGCGTGA 60.005 57.895 14.47 0.00 40.58 4.35
1760 1769 0.391263 GAAACCTTCGAGGGCGTGAT 60.391 55.000 14.47 0.00 40.58 3.06
1761 1770 0.036306 AAACCTTCGAGGGCGTGATT 59.964 50.000 14.47 0.00 40.58 2.57
1762 1771 0.036306 AACCTTCGAGGGCGTGATTT 59.964 50.000 14.47 0.00 40.58 2.17
1763 1772 0.036306 ACCTTCGAGGGCGTGATTTT 59.964 50.000 14.47 0.00 40.58 1.82
1764 1773 1.165270 CCTTCGAGGGCGTGATTTTT 58.835 50.000 0.00 0.00 38.98 1.94
1765 1774 1.135689 CCTTCGAGGGCGTGATTTTTG 60.136 52.381 0.00 0.00 38.98 2.44
1766 1775 0.878416 TTCGAGGGCGTGATTTTTGG 59.122 50.000 0.00 0.00 38.98 3.28
1767 1776 0.035598 TCGAGGGCGTGATTTTTGGA 59.964 50.000 0.00 0.00 38.98 3.53
1768 1777 0.878416 CGAGGGCGTGATTTTTGGAA 59.122 50.000 0.00 0.00 0.00 3.53
1769 1778 1.401018 CGAGGGCGTGATTTTTGGAAC 60.401 52.381 0.00 0.00 0.00 3.62
1770 1779 1.611491 GAGGGCGTGATTTTTGGAACA 59.389 47.619 0.00 0.00 0.00 3.18
1787 1796 3.748568 GGAACAAATATGATCCGGAGAGC 59.251 47.826 11.34 2.16 38.55 4.09
1788 1797 4.503991 GGAACAAATATGATCCGGAGAGCT 60.504 45.833 11.34 0.00 38.55 4.09
1789 1798 4.696479 ACAAATATGATCCGGAGAGCTT 57.304 40.909 11.34 2.93 0.00 3.74
1790 1799 4.384056 ACAAATATGATCCGGAGAGCTTG 58.616 43.478 11.34 10.81 0.00 4.01
1791 1800 3.692257 AATATGATCCGGAGAGCTTGG 57.308 47.619 11.34 0.00 0.00 3.61
1792 1801 2.381752 TATGATCCGGAGAGCTTGGA 57.618 50.000 11.34 0.00 35.96 3.53
1793 1802 1.047002 ATGATCCGGAGAGCTTGGAG 58.953 55.000 11.34 0.00 34.75 3.86
1794 1803 0.324738 TGATCCGGAGAGCTTGGAGT 60.325 55.000 11.34 0.00 34.75 3.85
1795 1804 0.103937 GATCCGGAGAGCTTGGAGTG 59.896 60.000 11.34 0.00 34.75 3.51
1796 1805 1.965754 ATCCGGAGAGCTTGGAGTGC 61.966 60.000 11.34 0.00 34.75 4.40
1797 1806 2.659016 CGGAGAGCTTGGAGTGCA 59.341 61.111 0.00 0.00 0.00 4.57
1798 1807 1.004560 CGGAGAGCTTGGAGTGCAA 60.005 57.895 0.00 0.00 0.00 4.08
1799 1808 1.018226 CGGAGAGCTTGGAGTGCAAG 61.018 60.000 19.22 19.22 0.00 4.01
1800 1809 0.036022 GGAGAGCTTGGAGTGCAAGT 59.964 55.000 23.33 11.74 32.59 3.16
1801 1810 1.437625 GAGAGCTTGGAGTGCAAGTC 58.562 55.000 23.33 18.41 34.83 3.01
1802 1811 0.761187 AGAGCTTGGAGTGCAAGTCA 59.239 50.000 23.33 0.00 38.29 3.41
1803 1812 1.141657 AGAGCTTGGAGTGCAAGTCAA 59.858 47.619 23.33 0.00 38.29 3.18
1804 1813 1.534595 GAGCTTGGAGTGCAAGTCAAG 59.465 52.381 23.33 15.57 38.29 3.02
1805 1814 1.141657 AGCTTGGAGTGCAAGTCAAGA 59.858 47.619 23.33 0.00 38.29 3.02
1806 1815 1.949525 GCTTGGAGTGCAAGTCAAGAA 59.050 47.619 23.33 3.27 38.29 2.52
1807 1816 2.031333 GCTTGGAGTGCAAGTCAAGAAG 60.031 50.000 23.33 11.11 38.29 2.85
1808 1817 1.597742 TGGAGTGCAAGTCAAGAAGC 58.402 50.000 0.00 0.00 38.29 3.86
1809 1818 0.877743 GGAGTGCAAGTCAAGAAGCC 59.122 55.000 0.00 0.00 38.29 4.35
1810 1819 1.544314 GGAGTGCAAGTCAAGAAGCCT 60.544 52.381 0.00 0.00 38.29 4.58
1811 1820 1.803555 GAGTGCAAGTCAAGAAGCCTC 59.196 52.381 0.00 0.00 35.94 4.70
1812 1821 0.877743 GTGCAAGTCAAGAAGCCTCC 59.122 55.000 0.00 0.00 0.00 4.30
1813 1822 0.603707 TGCAAGTCAAGAAGCCTCCG 60.604 55.000 0.00 0.00 0.00 4.63
1814 1823 0.320771 GCAAGTCAAGAAGCCTCCGA 60.321 55.000 0.00 0.00 0.00 4.55
1815 1824 1.719600 CAAGTCAAGAAGCCTCCGAG 58.280 55.000 0.00 0.00 0.00 4.63
1816 1825 0.610687 AAGTCAAGAAGCCTCCGAGG 59.389 55.000 10.41 10.41 38.80 4.63
1817 1826 1.219393 GTCAAGAAGCCTCCGAGGG 59.781 63.158 16.51 0.00 35.37 4.30
2071 2080 1.471119 AACCTTCTGTATCCGCGAGA 58.529 50.000 8.23 3.13 0.00 4.04
2072 2081 1.693627 ACCTTCTGTATCCGCGAGAT 58.306 50.000 8.23 11.64 39.15 2.75
2073 2082 1.609555 ACCTTCTGTATCCGCGAGATC 59.390 52.381 8.23 4.19 36.33 2.75
2074 2083 1.068194 CCTTCTGTATCCGCGAGATCC 60.068 57.143 8.23 0.00 36.33 3.36
2075 2084 0.959553 TTCTGTATCCGCGAGATCCC 59.040 55.000 8.23 4.16 36.33 3.85
2076 2085 0.179001 TCTGTATCCGCGAGATCCCA 60.179 55.000 8.23 8.41 36.33 4.37
2077 2086 0.891373 CTGTATCCGCGAGATCCCAT 59.109 55.000 8.23 0.00 36.33 4.00
2078 2087 0.888619 TGTATCCGCGAGATCCCATC 59.111 55.000 8.23 0.00 36.33 3.51
2079 2088 1.178276 GTATCCGCGAGATCCCATCT 58.822 55.000 8.23 0.00 43.70 2.90
2080 2089 1.546476 GTATCCGCGAGATCCCATCTT 59.454 52.381 8.23 0.00 40.38 2.40
2081 2090 0.319728 ATCCGCGAGATCCCATCTTG 59.680 55.000 8.23 0.00 40.38 3.02
2082 2091 1.301244 CCGCGAGATCCCATCTTGG 60.301 63.158 8.23 0.00 40.38 3.61
2083 2092 1.742146 CGCGAGATCCCATCTTGGA 59.258 57.895 0.00 0.00 40.96 3.53
2084 2093 0.319383 CGCGAGATCCCATCTTGGAG 60.319 60.000 0.00 0.00 40.96 3.86
2085 2094 0.602372 GCGAGATCCCATCTTGGAGC 60.602 60.000 3.43 0.00 40.96 4.70
2086 2095 0.034616 CGAGATCCCATCTTGGAGCC 59.965 60.000 0.00 0.00 41.84 4.70
2087 2096 0.399833 GAGATCCCATCTTGGAGCCC 59.600 60.000 0.00 0.00 41.84 5.19
2088 2097 0.029267 AGATCCCATCTTGGAGCCCT 60.029 55.000 0.00 0.00 41.84 5.19
2089 2098 0.849417 GATCCCATCTTGGAGCCCTT 59.151 55.000 0.00 0.00 40.96 3.95
2090 2099 0.554792 ATCCCATCTTGGAGCCCTTG 59.445 55.000 0.00 0.00 40.96 3.61
2091 2100 1.755783 CCCATCTTGGAGCCCTTGC 60.756 63.158 0.00 0.00 40.96 4.01
2092 2101 1.755783 CCATCTTGGAGCCCTTGCC 60.756 63.158 0.00 0.00 40.96 4.52
2093 2102 2.117156 CATCTTGGAGCCCTTGCCG 61.117 63.158 0.00 0.00 38.69 5.69
2094 2103 3.350031 ATCTTGGAGCCCTTGCCGG 62.350 63.158 0.00 0.00 38.69 6.13
2120 2129 3.646715 CGGAGGGGGAAGCAACCA 61.647 66.667 1.88 0.00 0.00 3.67
2121 2130 2.035783 GGAGGGGGAAGCAACCAC 59.964 66.667 1.88 0.00 0.00 4.16
2122 2131 2.359975 GAGGGGGAAGCAACCACG 60.360 66.667 1.88 0.00 36.21 4.94
2123 2132 3.920093 GAGGGGGAAGCAACCACGG 62.920 68.421 1.88 0.00 36.21 4.94
2124 2133 3.961414 GGGGGAAGCAACCACGGA 61.961 66.667 0.00 0.00 33.50 4.69
2125 2134 2.359975 GGGGAAGCAACCACGGAG 60.360 66.667 0.00 0.00 0.00 4.63
2126 2135 2.359975 GGGAAGCAACCACGGAGG 60.360 66.667 0.00 0.00 45.67 4.30
2127 2136 2.359975 GGAAGCAACCACGGAGGG 60.360 66.667 1.11 0.00 43.89 4.30
2128 2137 3.056328 GAAGCAACCACGGAGGGC 61.056 66.667 1.11 0.00 43.89 5.19
2129 2138 4.660938 AAGCAACCACGGAGGGCC 62.661 66.667 0.00 0.00 43.89 5.80
2132 2141 3.322466 CAACCACGGAGGGCCTCT 61.322 66.667 31.39 11.70 43.89 3.69
2133 2142 1.987855 CAACCACGGAGGGCCTCTA 60.988 63.158 31.39 0.00 43.89 2.43
2134 2143 1.988406 AACCACGGAGGGCCTCTAC 60.988 63.158 31.39 15.98 43.89 2.59
2135 2144 2.363795 CCACGGAGGGCCTCTACA 60.364 66.667 31.39 0.00 0.00 2.74
2136 2145 1.762460 CCACGGAGGGCCTCTACAT 60.762 63.158 31.39 12.83 0.00 2.29
2137 2146 1.742768 CACGGAGGGCCTCTACATC 59.257 63.158 31.39 14.51 0.00 3.06
2138 2147 1.043116 CACGGAGGGCCTCTACATCA 61.043 60.000 31.39 0.00 0.00 3.07
2139 2148 0.325296 ACGGAGGGCCTCTACATCAA 60.325 55.000 31.39 0.00 0.00 2.57
2140 2149 0.105039 CGGAGGGCCTCTACATCAAC 59.895 60.000 31.39 12.33 0.00 3.18
2141 2150 1.204146 GGAGGGCCTCTACATCAACA 58.796 55.000 31.39 0.00 0.00 3.33
2142 2151 1.771255 GGAGGGCCTCTACATCAACAT 59.229 52.381 31.39 0.00 0.00 2.71
2143 2152 2.224402 GGAGGGCCTCTACATCAACATC 60.224 54.545 31.39 7.84 0.00 3.06
2144 2153 1.771255 AGGGCCTCTACATCAACATCC 59.229 52.381 0.00 0.00 0.00 3.51
2145 2154 1.771255 GGGCCTCTACATCAACATCCT 59.229 52.381 0.84 0.00 0.00 3.24
2146 2155 2.173569 GGGCCTCTACATCAACATCCTT 59.826 50.000 0.84 0.00 0.00 3.36
2147 2156 3.209410 GGCCTCTACATCAACATCCTTG 58.791 50.000 0.00 0.00 0.00 3.61
2148 2157 2.615912 GCCTCTACATCAACATCCTTGC 59.384 50.000 0.00 0.00 0.00 4.01
2149 2158 3.209410 CCTCTACATCAACATCCTTGCC 58.791 50.000 0.00 0.00 0.00 4.52
2150 2159 3.209410 CTCTACATCAACATCCTTGCCC 58.791 50.000 0.00 0.00 0.00 5.36
2151 2160 2.092429 TCTACATCAACATCCTTGCCCC 60.092 50.000 0.00 0.00 0.00 5.80
2152 2161 0.706433 ACATCAACATCCTTGCCCCT 59.294 50.000 0.00 0.00 0.00 4.79
2153 2162 1.341383 ACATCAACATCCTTGCCCCTC 60.341 52.381 0.00 0.00 0.00 4.30
2154 2163 0.259938 ATCAACATCCTTGCCCCTCC 59.740 55.000 0.00 0.00 0.00 4.30
2155 2164 1.750399 CAACATCCTTGCCCCTCCG 60.750 63.158 0.00 0.00 0.00 4.63
2156 2165 1.923395 AACATCCTTGCCCCTCCGA 60.923 57.895 0.00 0.00 0.00 4.55
2157 2166 1.281925 AACATCCTTGCCCCTCCGAT 61.282 55.000 0.00 0.00 0.00 4.18
2158 2167 1.228063 CATCCTTGCCCCTCCGATG 60.228 63.158 0.00 0.00 0.00 3.84
2159 2168 1.384502 ATCCTTGCCCCTCCGATGA 60.385 57.895 0.00 0.00 0.00 2.92
2160 2169 1.414061 ATCCTTGCCCCTCCGATGAG 61.414 60.000 0.00 0.00 38.42 2.90
2161 2170 2.370445 CCTTGCCCCTCCGATGAGT 61.370 63.158 0.00 0.00 36.86 3.41
2162 2171 1.604378 CTTGCCCCTCCGATGAGTT 59.396 57.895 0.00 0.00 36.86 3.01
2163 2172 0.745845 CTTGCCCCTCCGATGAGTTG 60.746 60.000 0.00 0.00 36.86 3.16
2164 2173 1.488705 TTGCCCCTCCGATGAGTTGT 61.489 55.000 0.00 0.00 36.86 3.32
2165 2174 1.450312 GCCCCTCCGATGAGTTGTG 60.450 63.158 0.00 0.00 36.86 3.33
2166 2175 1.899437 GCCCCTCCGATGAGTTGTGA 61.899 60.000 0.00 0.00 36.86 3.58
2167 2176 0.176680 CCCCTCCGATGAGTTGTGAG 59.823 60.000 0.00 0.00 36.86 3.51
2168 2177 0.898320 CCCTCCGATGAGTTGTGAGT 59.102 55.000 0.00 0.00 36.86 3.41
2169 2178 2.100197 CCCTCCGATGAGTTGTGAGTA 58.900 52.381 0.00 0.00 36.86 2.59
2170 2179 2.099921 CCCTCCGATGAGTTGTGAGTAG 59.900 54.545 0.00 0.00 36.86 2.57
2171 2180 2.755655 CCTCCGATGAGTTGTGAGTAGT 59.244 50.000 0.00 0.00 36.86 2.73
2172 2181 3.193691 CCTCCGATGAGTTGTGAGTAGTT 59.806 47.826 0.00 0.00 36.86 2.24
2173 2182 4.322049 CCTCCGATGAGTTGTGAGTAGTTT 60.322 45.833 0.00 0.00 36.86 2.66
2174 2183 5.105877 CCTCCGATGAGTTGTGAGTAGTTTA 60.106 44.000 0.00 0.00 36.86 2.01
2175 2184 5.706916 TCCGATGAGTTGTGAGTAGTTTAC 58.293 41.667 0.00 0.00 0.00 2.01
2176 2185 4.863131 CCGATGAGTTGTGAGTAGTTTACC 59.137 45.833 0.00 0.00 0.00 2.85
2177 2186 5.466819 CGATGAGTTGTGAGTAGTTTACCA 58.533 41.667 0.00 0.00 0.00 3.25
2178 2187 5.345202 CGATGAGTTGTGAGTAGTTTACCAC 59.655 44.000 0.00 0.00 33.39 4.16
2179 2188 5.601583 TGAGTTGTGAGTAGTTTACCACA 57.398 39.130 0.00 0.00 37.76 4.17
2180 2189 5.597806 TGAGTTGTGAGTAGTTTACCACAG 58.402 41.667 0.00 0.00 39.35 3.66
2181 2190 5.361571 TGAGTTGTGAGTAGTTTACCACAGA 59.638 40.000 0.00 0.00 39.35 3.41
2182 2191 5.598769 AGTTGTGAGTAGTTTACCACAGAC 58.401 41.667 0.00 0.00 39.35 3.51
2183 2192 4.595762 TGTGAGTAGTTTACCACAGACC 57.404 45.455 0.00 0.00 36.02 3.85
2184 2193 4.220724 TGTGAGTAGTTTACCACAGACCT 58.779 43.478 0.00 0.00 36.02 3.85
2185 2194 5.387788 TGTGAGTAGTTTACCACAGACCTA 58.612 41.667 0.00 0.00 36.02 3.08
2186 2195 5.242393 TGTGAGTAGTTTACCACAGACCTAC 59.758 44.000 0.00 0.00 36.02 3.18
2187 2196 4.456911 TGAGTAGTTTACCACAGACCTACG 59.543 45.833 0.00 0.00 0.00 3.51
2188 2197 3.760684 AGTAGTTTACCACAGACCTACGG 59.239 47.826 0.00 0.00 0.00 4.02
2189 2198 1.897802 AGTTTACCACAGACCTACGGG 59.102 52.381 0.00 0.00 38.88 5.28
2204 2213 4.525874 ACCTACGGGTCCATAGTTATTAGC 59.474 45.833 0.00 0.00 43.38 3.09
2205 2214 4.771054 CCTACGGGTCCATAGTTATTAGCT 59.229 45.833 0.00 0.00 0.00 3.32
2206 2215 5.948162 CCTACGGGTCCATAGTTATTAGCTA 59.052 44.000 0.00 0.00 0.00 3.32
2207 2216 5.979288 ACGGGTCCATAGTTATTAGCTAG 57.021 43.478 0.00 0.00 0.00 3.42
2208 2217 5.638133 ACGGGTCCATAGTTATTAGCTAGA 58.362 41.667 0.00 0.00 0.00 2.43
2209 2218 6.254522 ACGGGTCCATAGTTATTAGCTAGAT 58.745 40.000 0.00 0.00 0.00 1.98
2210 2219 6.153000 ACGGGTCCATAGTTATTAGCTAGATG 59.847 42.308 0.00 0.00 0.00 2.90
2211 2220 6.405953 CGGGTCCATAGTTATTAGCTAGATGG 60.406 46.154 0.00 2.62 0.00 3.51
2212 2221 6.342111 GGTCCATAGTTATTAGCTAGATGGC 58.658 44.000 0.00 2.17 0.00 4.40
2213 2222 6.155393 GGTCCATAGTTATTAGCTAGATGGCT 59.845 42.308 0.00 0.00 45.29 4.75
2214 2223 7.310734 GGTCCATAGTTATTAGCTAGATGGCTT 60.311 40.741 0.00 0.00 42.97 4.35
2215 2224 7.762159 GTCCATAGTTATTAGCTAGATGGCTTC 59.238 40.741 0.00 0.00 42.97 3.86
2216 2225 7.676043 TCCATAGTTATTAGCTAGATGGCTTCT 59.324 37.037 8.09 8.09 42.97 2.85
2217 2226 8.317679 CCATAGTTATTAGCTAGATGGCTTCTT 58.682 37.037 8.31 0.00 42.97 2.52
2218 2227 9.364989 CATAGTTATTAGCTAGATGGCTTCTTC 57.635 37.037 8.31 1.81 42.97 2.87
2219 2228 7.610580 AGTTATTAGCTAGATGGCTTCTTCT 57.389 36.000 8.31 8.69 42.97 2.85
2220 2229 7.666623 AGTTATTAGCTAGATGGCTTCTTCTC 58.333 38.462 8.31 0.00 42.97 2.87
2221 2230 7.508977 AGTTATTAGCTAGATGGCTTCTTCTCT 59.491 37.037 8.31 6.20 42.97 3.10
2222 2231 5.782893 TTAGCTAGATGGCTTCTTCTCTC 57.217 43.478 8.31 0.00 42.97 3.20
2223 2232 3.914771 AGCTAGATGGCTTCTTCTCTCT 58.085 45.455 8.31 0.00 39.86 3.10
2224 2233 4.289245 AGCTAGATGGCTTCTTCTCTCTT 58.711 43.478 8.31 0.00 39.86 2.85
2225 2234 4.716287 AGCTAGATGGCTTCTTCTCTCTTT 59.284 41.667 8.31 0.00 39.86 2.52
2226 2235 5.189539 AGCTAGATGGCTTCTTCTCTCTTTT 59.810 40.000 8.31 0.00 39.86 2.27
2227 2236 5.879777 GCTAGATGGCTTCTTCTCTCTTTTT 59.120 40.000 8.31 0.00 35.79 1.94
2228 2237 6.183360 GCTAGATGGCTTCTTCTCTCTTTTTG 60.183 42.308 8.31 0.00 35.79 2.44
2229 2238 5.008980 AGATGGCTTCTTCTCTCTTTTTGG 58.991 41.667 0.00 0.00 0.00 3.28
2230 2239 4.437682 TGGCTTCTTCTCTCTTTTTGGA 57.562 40.909 0.00 0.00 0.00 3.53
2231 2240 4.990526 TGGCTTCTTCTCTCTTTTTGGAT 58.009 39.130 0.00 0.00 0.00 3.41
2232 2241 5.006386 TGGCTTCTTCTCTCTTTTTGGATC 58.994 41.667 0.00 0.00 0.00 3.36
2233 2242 5.222007 TGGCTTCTTCTCTCTTTTTGGATCT 60.222 40.000 0.00 0.00 0.00 2.75
2234 2243 5.353956 GGCTTCTTCTCTCTTTTTGGATCTC 59.646 44.000 0.00 0.00 0.00 2.75
2235 2244 5.936956 GCTTCTTCTCTCTTTTTGGATCTCA 59.063 40.000 0.00 0.00 0.00 3.27
2236 2245 6.429385 GCTTCTTCTCTCTTTTTGGATCTCAA 59.571 38.462 0.00 0.00 0.00 3.02
2237 2246 7.121020 GCTTCTTCTCTCTTTTTGGATCTCAAT 59.879 37.037 0.00 0.00 34.98 2.57
2238 2247 9.664332 CTTCTTCTCTCTTTTTGGATCTCAATA 57.336 33.333 0.00 0.00 34.98 1.90
2239 2248 9.442047 TTCTTCTCTCTTTTTGGATCTCAATAC 57.558 33.333 0.00 0.00 34.98 1.89
2240 2249 8.597167 TCTTCTCTCTTTTTGGATCTCAATACA 58.403 33.333 0.00 0.00 34.98 2.29
2241 2250 9.224267 CTTCTCTCTTTTTGGATCTCAATACAA 57.776 33.333 0.00 0.00 33.72 2.41
2242 2251 9.745018 TTCTCTCTTTTTGGATCTCAATACAAT 57.255 29.630 0.00 0.00 35.60 2.71
2243 2252 9.170734 TCTCTCTTTTTGGATCTCAATACAATG 57.829 33.333 0.00 0.00 35.60 2.82
2244 2253 8.868522 TCTCTTTTTGGATCTCAATACAATGT 57.131 30.769 0.00 0.00 35.60 2.71
2245 2254 9.300681 TCTCTTTTTGGATCTCAATACAATGTT 57.699 29.630 0.00 0.00 35.60 2.71
2246 2255 9.565213 CTCTTTTTGGATCTCAATACAATGTTC 57.435 33.333 0.00 0.00 35.60 3.18
2247 2256 9.300681 TCTTTTTGGATCTCAATACAATGTTCT 57.699 29.630 0.00 0.00 35.60 3.01
2248 2257 9.565213 CTTTTTGGATCTCAATACAATGTTCTC 57.435 33.333 0.00 0.00 35.60 2.87
2249 2258 7.630242 TTTGGATCTCAATACAATGTTCTCC 57.370 36.000 0.00 0.00 35.60 3.71
2250 2259 5.684704 TGGATCTCAATACAATGTTCTCCC 58.315 41.667 0.00 0.00 0.00 4.30
2251 2260 5.066593 GGATCTCAATACAATGTTCTCCCC 58.933 45.833 0.00 0.00 0.00 4.81
2252 2261 4.503714 TCTCAATACAATGTTCTCCCCC 57.496 45.455 0.00 0.00 0.00 5.40
2253 2262 4.111577 TCTCAATACAATGTTCTCCCCCT 58.888 43.478 0.00 0.00 0.00 4.79
2254 2263 4.164221 TCTCAATACAATGTTCTCCCCCTC 59.836 45.833 0.00 0.00 0.00 4.30
2255 2264 4.111577 TCAATACAATGTTCTCCCCCTCT 58.888 43.478 0.00 0.00 0.00 3.69
2256 2265 4.164221 TCAATACAATGTTCTCCCCCTCTC 59.836 45.833 0.00 0.00 0.00 3.20
2257 2266 2.350863 ACAATGTTCTCCCCCTCTCT 57.649 50.000 0.00 0.00 0.00 3.10
2258 2267 2.637165 ACAATGTTCTCCCCCTCTCTT 58.363 47.619 0.00 0.00 0.00 2.85
2259 2268 2.307098 ACAATGTTCTCCCCCTCTCTTG 59.693 50.000 0.00 0.00 0.00 3.02
2260 2269 2.307098 CAATGTTCTCCCCCTCTCTTGT 59.693 50.000 0.00 0.00 0.00 3.16
2261 2270 1.352083 TGTTCTCCCCCTCTCTTGTG 58.648 55.000 0.00 0.00 0.00 3.33
2262 2271 0.615850 GTTCTCCCCCTCTCTTGTGG 59.384 60.000 0.00 0.00 0.00 4.17
2263 2272 0.491823 TTCTCCCCCTCTCTTGTGGA 59.508 55.000 0.00 0.00 0.00 4.02
2264 2273 0.041833 TCTCCCCCTCTCTTGTGGAG 59.958 60.000 0.00 0.00 43.21 3.86
2276 2285 6.324561 TCTCTTGTGGAGATCTATTCGATG 57.675 41.667 0.00 0.00 45.20 3.84
2277 2286 5.830457 TCTCTTGTGGAGATCTATTCGATGT 59.170 40.000 0.00 0.00 45.20 3.06
2278 2287 6.998673 TCTCTTGTGGAGATCTATTCGATGTA 59.001 38.462 0.00 0.00 45.20 2.29
2279 2288 7.502561 TCTCTTGTGGAGATCTATTCGATGTAA 59.497 37.037 0.00 0.00 45.20 2.41
2280 2289 8.183104 TCTTGTGGAGATCTATTCGATGTAAT 57.817 34.615 0.00 0.00 30.84 1.89
2281 2290 8.300286 TCTTGTGGAGATCTATTCGATGTAATC 58.700 37.037 0.00 0.00 40.89 1.75
2282 2291 7.767250 TGTGGAGATCTATTCGATGTAATCT 57.233 36.000 0.00 0.00 42.58 2.40
2283 2292 7.821652 TGTGGAGATCTATTCGATGTAATCTC 58.178 38.462 14.97 14.97 42.58 2.75
2284 2293 7.667635 TGTGGAGATCTATTCGATGTAATCTCT 59.332 37.037 19.32 4.92 42.58 3.10
2285 2294 8.519526 GTGGAGATCTATTCGATGTAATCTCTT 58.480 37.037 19.32 0.00 42.58 2.85
2286 2295 9.083422 TGGAGATCTATTCGATGTAATCTCTTT 57.917 33.333 19.32 0.00 42.58 2.52
2287 2296 9.921637 GGAGATCTATTCGATGTAATCTCTTTT 57.078 33.333 19.32 0.00 42.58 2.27
2290 2299 9.804547 GATCTATTCGATGTAATCTCTTTTTGC 57.195 33.333 0.00 0.00 42.58 3.68
2291 2300 7.841486 TCTATTCGATGTAATCTCTTTTTGCG 58.159 34.615 0.00 0.00 42.58 4.85
2292 2301 4.857871 TCGATGTAATCTCTTTTTGCGG 57.142 40.909 0.00 0.00 42.58 5.69
2293 2302 4.250464 TCGATGTAATCTCTTTTTGCGGT 58.750 39.130 0.00 0.00 42.58 5.68
2294 2303 4.092821 TCGATGTAATCTCTTTTTGCGGTG 59.907 41.667 0.00 0.00 42.58 4.94
2295 2304 4.142902 CGATGTAATCTCTTTTTGCGGTGT 60.143 41.667 0.00 0.00 42.58 4.16
2296 2305 4.481930 TGTAATCTCTTTTTGCGGTGTG 57.518 40.909 0.00 0.00 0.00 3.82
2297 2306 3.880490 TGTAATCTCTTTTTGCGGTGTGT 59.120 39.130 0.00 0.00 0.00 3.72
2298 2307 4.336993 TGTAATCTCTTTTTGCGGTGTGTT 59.663 37.500 0.00 0.00 0.00 3.32
2299 2308 4.385358 AATCTCTTTTTGCGGTGTGTTT 57.615 36.364 0.00 0.00 0.00 2.83
2300 2309 3.143807 TCTCTTTTTGCGGTGTGTTTG 57.856 42.857 0.00 0.00 0.00 2.93
2301 2310 2.490115 TCTCTTTTTGCGGTGTGTTTGT 59.510 40.909 0.00 0.00 0.00 2.83
2302 2311 2.851824 CTCTTTTTGCGGTGTGTTTGTC 59.148 45.455 0.00 0.00 0.00 3.18
2303 2312 1.581602 CTTTTTGCGGTGTGTTTGTCG 59.418 47.619 0.00 0.00 0.00 4.35
2304 2313 0.803117 TTTTGCGGTGTGTTTGTCGA 59.197 45.000 0.00 0.00 0.00 4.20
2305 2314 0.375454 TTTGCGGTGTGTTTGTCGAG 59.625 50.000 0.00 0.00 0.00 4.04
2306 2315 0.460459 TTGCGGTGTGTTTGTCGAGA 60.460 50.000 0.00 0.00 0.00 4.04
2307 2316 0.249699 TGCGGTGTGTTTGTCGAGAT 60.250 50.000 0.00 0.00 0.00 2.75
2308 2317 0.438830 GCGGTGTGTTTGTCGAGATC 59.561 55.000 0.00 0.00 0.00 2.75
2309 2318 1.068474 CGGTGTGTTTGTCGAGATCC 58.932 55.000 0.00 0.00 0.00 3.36
2310 2319 1.068474 GGTGTGTTTGTCGAGATCCG 58.932 55.000 0.00 0.00 40.25 4.18
2311 2320 1.336517 GGTGTGTTTGTCGAGATCCGA 60.337 52.381 2.65 2.65 46.35 4.55
2321 2330 3.097877 TCGAGATCCGATGAATTGTGG 57.902 47.619 2.65 0.00 43.23 4.17
2322 2331 2.138320 CGAGATCCGATGAATTGTGGG 58.862 52.381 0.00 0.00 41.76 4.61
2323 2332 2.483714 CGAGATCCGATGAATTGTGGGT 60.484 50.000 0.00 0.00 41.76 4.51
2324 2333 3.545703 GAGATCCGATGAATTGTGGGTT 58.454 45.455 0.00 0.00 0.00 4.11
2325 2334 3.947834 GAGATCCGATGAATTGTGGGTTT 59.052 43.478 0.00 0.00 0.00 3.27
2326 2335 5.110814 AGATCCGATGAATTGTGGGTTTA 57.889 39.130 0.00 0.00 0.00 2.01
2327 2336 5.694995 AGATCCGATGAATTGTGGGTTTAT 58.305 37.500 0.00 0.00 0.00 1.40
2328 2337 5.532406 AGATCCGATGAATTGTGGGTTTATG 59.468 40.000 0.00 0.00 0.00 1.90
2329 2338 4.849518 TCCGATGAATTGTGGGTTTATGA 58.150 39.130 0.00 0.00 0.00 2.15
2330 2339 5.445069 TCCGATGAATTGTGGGTTTATGAT 58.555 37.500 0.00 0.00 0.00 2.45
2331 2340 5.530915 TCCGATGAATTGTGGGTTTATGATC 59.469 40.000 0.00 0.00 0.00 2.92
2332 2341 5.299028 CCGATGAATTGTGGGTTTATGATCA 59.701 40.000 0.00 0.00 0.00 2.92
2333 2342 6.183360 CCGATGAATTGTGGGTTTATGATCAA 60.183 38.462 0.00 0.00 0.00 2.57
2334 2343 6.914215 CGATGAATTGTGGGTTTATGATCAAG 59.086 38.462 0.00 0.00 0.00 3.02
2335 2344 7.415541 CGATGAATTGTGGGTTTATGATCAAGT 60.416 37.037 0.00 0.00 0.00 3.16
2336 2345 7.537596 TGAATTGTGGGTTTATGATCAAGTT 57.462 32.000 0.00 0.00 0.00 2.66
2337 2346 7.961351 TGAATTGTGGGTTTATGATCAAGTTT 58.039 30.769 0.00 0.00 0.00 2.66
2338 2347 9.083422 TGAATTGTGGGTTTATGATCAAGTTTA 57.917 29.630 0.00 0.00 0.00 2.01
2341 2350 8.877864 TTGTGGGTTTATGATCAAGTTTATCT 57.122 30.769 0.00 0.00 0.00 1.98
2342 2351 9.967451 TTGTGGGTTTATGATCAAGTTTATCTA 57.033 29.630 0.00 0.00 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.448119 GGGGCTTTTCGGCTGATAGC 61.448 60.000 17.57 17.57 41.46 2.97
24 25 1.906105 TACGGGGCTTTTCGGCTGAT 61.906 55.000 0.00 0.00 38.46 2.90
25 26 2.114488 TTACGGGGCTTTTCGGCTGA 62.114 55.000 0.00 0.00 38.46 4.26
27 28 1.376812 CTTACGGGGCTTTTCGGCT 60.377 57.895 0.00 0.00 38.46 5.52
38 39 0.529992 GGATTCGGAGCACTTACGGG 60.530 60.000 0.00 0.00 0.00 5.28
40 41 1.480219 GCGGATTCGGAGCACTTACG 61.480 60.000 0.00 0.00 36.79 3.18
72 73 1.209990 TGGCAAATTGATCCAATGGGC 59.790 47.619 0.00 0.00 34.04 5.36
114 115 7.722795 AATGTAAAATAAAAGTTGCCCACAC 57.277 32.000 0.00 0.00 0.00 3.82
153 154 2.047040 CGACAGTGAGCAGCATATACG 58.953 52.381 0.00 0.00 0.00 3.06
316 318 4.261614 GCGAGGGAAGAACTTTTGTTTCAT 60.262 41.667 0.00 0.00 43.66 2.57
344 346 7.592533 GGAATAACGAAAAAGTAAAAGTGACCC 59.407 37.037 0.00 0.00 0.00 4.46
369 371 1.724545 TCATACCCTGGGGATTACGG 58.275 55.000 18.88 1.80 38.96 4.02
610 615 5.023452 ACTATGACCGGCCATCATATTAGA 58.977 41.667 21.37 6.67 38.16 2.10
802 808 7.034685 TGATGGAGATTTGTAGCATCATTTG 57.965 36.000 0.00 0.00 0.00 2.32
803 809 7.649533 TTGATGGAGATTTGTAGCATCATTT 57.350 32.000 0.00 0.00 0.00 2.32
868 874 2.609747 CAGCTGTAGCCCCCTAGAATA 58.390 52.381 5.25 0.00 43.38 1.75
933 939 3.572642 TCTACACCTCTCCAAACAGACA 58.427 45.455 0.00 0.00 0.00 3.41
936 942 4.899502 ACAATCTACACCTCTCCAAACAG 58.100 43.478 0.00 0.00 0.00 3.16
970 978 5.274822 TCCTTATCTTTTCCCGGTCTTCTA 58.725 41.667 0.00 0.00 0.00 2.10
979 987 9.408648 TGACATTCTTTATCCTTATCTTTTCCC 57.591 33.333 0.00 0.00 0.00 3.97
1015 1023 1.309950 TCGGGAAGTGATCTAGCTCG 58.690 55.000 0.00 0.00 0.00 5.03
1080 1088 3.977427 ACGAAGTTGAATGGCTTTTTCC 58.023 40.909 0.00 0.00 37.78 3.13
1159 1168 7.890515 TGCACTATCATTTGTTCAATTTGGTA 58.109 30.769 0.00 0.00 0.00 3.25
1181 1190 5.479724 TCCCAATTAACAACATGATCTTGCA 59.520 36.000 8.45 0.00 0.00 4.08
1182 1191 5.964758 TCCCAATTAACAACATGATCTTGC 58.035 37.500 8.45 0.00 0.00 4.01
1198 1207 4.418395 TTCCCCTCTTCAATTCCCAATT 57.582 40.909 0.00 0.00 0.00 2.32
1219 1228 2.148916 TGTTCGATGTCTGCTCGTTT 57.851 45.000 0.00 0.00 37.40 3.60
1277 1286 7.170320 GCAATCCATATTGATGACAAATTCCAC 59.830 37.037 2.38 0.00 44.50 4.02
1278 1287 7.211573 GCAATCCATATTGATGACAAATTCCA 58.788 34.615 2.38 0.00 44.50 3.53
1279 1288 6.647895 GGCAATCCATATTGATGACAAATTCC 59.352 38.462 2.38 0.00 44.50 3.01
1280 1289 6.647895 GGGCAATCCATATTGATGACAAATTC 59.352 38.462 2.38 0.00 44.50 2.17
1281 1290 6.328148 AGGGCAATCCATATTGATGACAAATT 59.672 34.615 2.38 0.00 44.50 1.82
1282 1291 5.842328 AGGGCAATCCATATTGATGACAAAT 59.158 36.000 2.38 0.00 44.50 2.32
1283 1292 5.210430 AGGGCAATCCATATTGATGACAAA 58.790 37.500 2.38 0.00 44.50 2.83
1284 1293 4.806892 AGGGCAATCCATATTGATGACAA 58.193 39.130 2.38 0.00 44.50 3.18
1285 1294 4.458256 AGGGCAATCCATATTGATGACA 57.542 40.909 2.38 0.00 44.50 3.58
1286 1295 5.106555 CGTAAGGGCAATCCATATTGATGAC 60.107 44.000 2.38 0.00 44.50 3.06
1287 1296 5.003160 CGTAAGGGCAATCCATATTGATGA 58.997 41.667 2.38 0.00 44.50 2.92
1288 1297 4.379813 GCGTAAGGGCAATCCATATTGATG 60.380 45.833 2.38 0.00 40.93 3.07
1289 1298 3.758554 GCGTAAGGGCAATCCATATTGAT 59.241 43.478 2.38 0.00 40.93 2.57
1290 1299 3.146066 GCGTAAGGGCAATCCATATTGA 58.854 45.455 2.38 0.00 40.93 2.57
1291 1300 2.095768 CGCGTAAGGGCAATCCATATTG 60.096 50.000 0.00 0.00 45.71 1.90
1294 1303 3.299050 CGCGTAAGGGCAATCCATA 57.701 52.632 0.00 0.00 45.71 2.74
1469 1478 8.980610 TCGAACGAAAAATCAAGTGAACTAATA 58.019 29.630 0.00 0.00 0.00 0.98
1571 1580 8.879427 AAAGGGGTAATATAATAGCATGGAAC 57.121 34.615 0.00 0.00 0.00 3.62
1584 1593 9.822727 CCCATAAACATCTAAAAGGGGTAATAT 57.177 33.333 0.00 0.00 0.00 1.28
1585 1594 7.726738 GCCCATAAACATCTAAAAGGGGTAATA 59.273 37.037 0.00 0.00 35.58 0.98
1586 1595 6.553476 GCCCATAAACATCTAAAAGGGGTAAT 59.447 38.462 0.00 0.00 35.58 1.89
1587 1596 5.894964 GCCCATAAACATCTAAAAGGGGTAA 59.105 40.000 0.00 0.00 35.58 2.85
1588 1597 5.194942 AGCCCATAAACATCTAAAAGGGGTA 59.805 40.000 0.00 0.00 43.40 3.69
1589 1598 4.016572 AGCCCATAAACATCTAAAAGGGGT 60.017 41.667 0.00 0.00 40.68 4.95
1590 1599 4.546674 AGCCCATAAACATCTAAAAGGGG 58.453 43.478 0.00 0.00 35.58 4.79
1591 1600 6.544928 AAAGCCCATAAACATCTAAAAGGG 57.455 37.500 0.00 0.00 38.10 3.95
1598 1607 9.030452 TGTGTAAAATAAAGCCCATAAACATCT 57.970 29.630 0.00 0.00 0.00 2.90
1599 1608 9.816354 ATGTGTAAAATAAAGCCCATAAACATC 57.184 29.630 0.00 0.00 0.00 3.06
1629 1638 9.895138 GTTAGTAGGTTAGTCCCAAAAATGATA 57.105 33.333 0.00 0.00 36.75 2.15
1630 1639 7.832685 GGTTAGTAGGTTAGTCCCAAAAATGAT 59.167 37.037 0.00 0.00 36.75 2.45
1631 1640 7.170277 GGTTAGTAGGTTAGTCCCAAAAATGA 58.830 38.462 0.00 0.00 36.75 2.57
1632 1641 6.093082 CGGTTAGTAGGTTAGTCCCAAAAATG 59.907 42.308 0.00 0.00 36.75 2.32
1633 1642 6.175471 CGGTTAGTAGGTTAGTCCCAAAAAT 58.825 40.000 0.00 0.00 36.75 1.82
1634 1643 5.512921 CCGGTTAGTAGGTTAGTCCCAAAAA 60.513 44.000 0.00 0.00 36.75 1.94
1635 1644 4.020307 CCGGTTAGTAGGTTAGTCCCAAAA 60.020 45.833 0.00 0.00 36.75 2.44
1636 1645 3.515104 CCGGTTAGTAGGTTAGTCCCAAA 59.485 47.826 0.00 0.00 36.75 3.28
1637 1646 3.099141 CCGGTTAGTAGGTTAGTCCCAA 58.901 50.000 0.00 0.00 36.75 4.12
1638 1647 2.311542 TCCGGTTAGTAGGTTAGTCCCA 59.688 50.000 0.00 0.00 36.75 4.37
1639 1648 2.954989 CTCCGGTTAGTAGGTTAGTCCC 59.045 54.545 0.00 0.00 36.75 4.46
1640 1649 2.954989 CCTCCGGTTAGTAGGTTAGTCC 59.045 54.545 0.00 0.00 0.00 3.85
1641 1650 2.360483 GCCTCCGGTTAGTAGGTTAGTC 59.640 54.545 0.00 0.00 32.67 2.59
1642 1651 2.382882 GCCTCCGGTTAGTAGGTTAGT 58.617 52.381 0.00 0.00 32.67 2.24
1643 1652 1.685517 GGCCTCCGGTTAGTAGGTTAG 59.314 57.143 0.00 0.00 32.67 2.34
1644 1653 1.689258 GGGCCTCCGGTTAGTAGGTTA 60.689 57.143 0.84 0.00 32.67 2.85
1645 1654 0.979709 GGGCCTCCGGTTAGTAGGTT 60.980 60.000 0.84 0.00 32.67 3.50
1646 1655 1.382283 GGGCCTCCGGTTAGTAGGT 60.382 63.158 0.84 0.00 32.67 3.08
1647 1656 1.382146 TGGGCCTCCGGTTAGTAGG 60.382 63.158 4.53 0.51 35.24 3.18
1648 1657 2.029307 GCTGGGCCTCCGGTTAGTAG 62.029 65.000 4.53 0.00 41.53 2.57
1649 1658 2.062177 GCTGGGCCTCCGGTTAGTA 61.062 63.158 4.53 0.00 41.53 1.82
1650 1659 3.400054 GCTGGGCCTCCGGTTAGT 61.400 66.667 4.53 0.00 41.53 2.24
1651 1660 4.176752 GGCTGGGCCTCCGGTTAG 62.177 72.222 4.53 0.00 46.69 2.34
1683 1692 8.788806 TCTTCGAAATACTGAAATAGGCAAAAA 58.211 29.630 0.00 0.00 0.00 1.94
1684 1693 8.330466 TCTTCGAAATACTGAAATAGGCAAAA 57.670 30.769 0.00 0.00 0.00 2.44
1685 1694 7.915293 TCTTCGAAATACTGAAATAGGCAAA 57.085 32.000 0.00 0.00 0.00 3.68
1686 1695 7.915293 TTCTTCGAAATACTGAAATAGGCAA 57.085 32.000 0.00 0.00 0.00 4.52
1687 1696 7.915293 TTTCTTCGAAATACTGAAATAGGCA 57.085 32.000 0.00 0.00 0.00 4.75
1688 1697 7.910683 CCTTTTCTTCGAAATACTGAAATAGGC 59.089 37.037 9.49 0.00 0.00 3.93
1689 1698 9.162764 TCCTTTTCTTCGAAATACTGAAATAGG 57.837 33.333 18.83 18.83 32.66 2.57
1695 1704 9.884636 TGATATTCCTTTTCTTCGAAATACTGA 57.115 29.630 0.00 0.00 0.00 3.41
1699 1708 9.982291 CGTTTGATATTCCTTTTCTTCGAAATA 57.018 29.630 0.00 0.00 0.00 1.40
1700 1709 7.968405 CCGTTTGATATTCCTTTTCTTCGAAAT 59.032 33.333 0.00 0.00 0.00 2.17
1701 1710 7.173562 TCCGTTTGATATTCCTTTTCTTCGAAA 59.826 33.333 0.00 0.00 0.00 3.46
1702 1711 6.651643 TCCGTTTGATATTCCTTTTCTTCGAA 59.348 34.615 0.00 0.00 0.00 3.71
1703 1712 6.167685 TCCGTTTGATATTCCTTTTCTTCGA 58.832 36.000 0.00 0.00 0.00 3.71
1704 1713 6.092259 ACTCCGTTTGATATTCCTTTTCTTCG 59.908 38.462 0.00 0.00 0.00 3.79
1705 1714 7.379098 ACTCCGTTTGATATTCCTTTTCTTC 57.621 36.000 0.00 0.00 0.00 2.87
1706 1715 6.374613 GGACTCCGTTTGATATTCCTTTTCTT 59.625 38.462 0.00 0.00 0.00 2.52
1707 1716 5.880887 GGACTCCGTTTGATATTCCTTTTCT 59.119 40.000 0.00 0.00 0.00 2.52
1708 1717 5.646360 TGGACTCCGTTTGATATTCCTTTTC 59.354 40.000 0.00 0.00 0.00 2.29
1709 1718 5.566469 TGGACTCCGTTTGATATTCCTTTT 58.434 37.500 0.00 0.00 0.00 2.27
1710 1719 5.174037 TGGACTCCGTTTGATATTCCTTT 57.826 39.130 0.00 0.00 0.00 3.11
1711 1720 4.837093 TGGACTCCGTTTGATATTCCTT 57.163 40.909 0.00 0.00 0.00 3.36
1712 1721 4.837093 TTGGACTCCGTTTGATATTCCT 57.163 40.909 0.00 0.00 0.00 3.36
1713 1722 4.201783 CGTTTGGACTCCGTTTGATATTCC 60.202 45.833 0.00 0.00 0.00 3.01
1714 1723 4.201783 CCGTTTGGACTCCGTTTGATATTC 60.202 45.833 0.00 0.00 37.49 1.75
1715 1724 3.687698 CCGTTTGGACTCCGTTTGATATT 59.312 43.478 0.00 0.00 37.49 1.28
1716 1725 3.055675 TCCGTTTGGACTCCGTTTGATAT 60.056 43.478 0.00 0.00 40.17 1.63
1717 1726 2.299582 TCCGTTTGGACTCCGTTTGATA 59.700 45.455 0.00 0.00 40.17 2.15
1718 1727 1.071071 TCCGTTTGGACTCCGTTTGAT 59.929 47.619 0.00 0.00 40.17 2.57
1719 1728 0.464870 TCCGTTTGGACTCCGTTTGA 59.535 50.000 0.00 0.00 40.17 2.69
1720 1729 1.301423 TTCCGTTTGGACTCCGTTTG 58.699 50.000 0.00 0.00 46.45 2.93
1721 1730 1.877443 CATTCCGTTTGGACTCCGTTT 59.123 47.619 0.00 0.00 46.45 3.60
1722 1731 1.071071 TCATTCCGTTTGGACTCCGTT 59.929 47.619 0.00 0.00 46.45 4.44
1723 1732 0.682852 TCATTCCGTTTGGACTCCGT 59.317 50.000 0.00 0.00 46.45 4.69
1724 1733 1.803334 TTCATTCCGTTTGGACTCCG 58.197 50.000 0.00 0.00 46.45 4.63
1725 1734 2.228103 GGTTTCATTCCGTTTGGACTCC 59.772 50.000 0.00 0.00 46.45 3.85
1726 1735 3.146847 AGGTTTCATTCCGTTTGGACTC 58.853 45.455 0.00 0.00 46.45 3.36
1727 1736 3.223674 AGGTTTCATTCCGTTTGGACT 57.776 42.857 0.00 0.00 46.45 3.85
1728 1737 3.608474 CGAAGGTTTCATTCCGTTTGGAC 60.608 47.826 0.00 0.00 46.45 4.02
1729 1738 2.550606 CGAAGGTTTCATTCCGTTTGGA 59.449 45.455 0.00 0.00 44.61 3.53
1730 1739 2.550606 TCGAAGGTTTCATTCCGTTTGG 59.449 45.455 0.00 0.00 0.00 3.28
1731 1740 3.364964 CCTCGAAGGTTTCATTCCGTTTG 60.365 47.826 0.00 0.00 0.00 2.93
1732 1741 2.812011 CCTCGAAGGTTTCATTCCGTTT 59.188 45.455 0.00 0.00 0.00 3.60
1733 1742 2.423577 CCTCGAAGGTTTCATTCCGTT 58.576 47.619 0.00 0.00 0.00 4.44
1734 1743 1.338769 CCCTCGAAGGTTTCATTCCGT 60.339 52.381 0.00 0.00 31.93 4.69
1735 1744 1.369625 CCCTCGAAGGTTTCATTCCG 58.630 55.000 0.00 0.00 31.93 4.30
1736 1745 1.095600 GCCCTCGAAGGTTTCATTCC 58.904 55.000 1.20 0.00 31.93 3.01
1737 1746 0.727398 CGCCCTCGAAGGTTTCATTC 59.273 55.000 1.20 0.00 38.10 2.67
1738 1747 0.036306 ACGCCCTCGAAGGTTTCATT 59.964 50.000 1.20 0.00 39.41 2.57
1739 1748 0.673644 CACGCCCTCGAAGGTTTCAT 60.674 55.000 1.20 0.00 39.41 2.57
1740 1749 1.301401 CACGCCCTCGAAGGTTTCA 60.301 57.895 1.20 0.00 39.41 2.69
1741 1750 0.391263 ATCACGCCCTCGAAGGTTTC 60.391 55.000 1.20 0.00 39.41 2.78
1742 1751 0.036306 AATCACGCCCTCGAAGGTTT 59.964 50.000 1.20 0.00 39.41 3.27
1743 1752 0.036306 AAATCACGCCCTCGAAGGTT 59.964 50.000 1.20 0.00 39.41 3.50
1744 1753 0.036306 AAAATCACGCCCTCGAAGGT 59.964 50.000 1.20 0.00 39.41 3.50
1745 1754 1.135689 CAAAAATCACGCCCTCGAAGG 60.136 52.381 0.00 0.00 39.41 3.46
1746 1755 1.135689 CCAAAAATCACGCCCTCGAAG 60.136 52.381 0.00 0.00 39.41 3.79
1747 1756 0.878416 CCAAAAATCACGCCCTCGAA 59.122 50.000 0.00 0.00 39.41 3.71
1748 1757 0.035598 TCCAAAAATCACGCCCTCGA 59.964 50.000 0.00 0.00 39.41 4.04
1749 1758 0.878416 TTCCAAAAATCACGCCCTCG 59.122 50.000 0.00 0.00 42.43 4.63
1750 1759 1.611491 TGTTCCAAAAATCACGCCCTC 59.389 47.619 0.00 0.00 0.00 4.30
1751 1760 1.698506 TGTTCCAAAAATCACGCCCT 58.301 45.000 0.00 0.00 0.00 5.19
1752 1761 2.517650 TTGTTCCAAAAATCACGCCC 57.482 45.000 0.00 0.00 0.00 6.13
1753 1762 5.866633 TCATATTTGTTCCAAAAATCACGCC 59.133 36.000 0.00 0.00 0.00 5.68
1754 1763 6.942886 TCATATTTGTTCCAAAAATCACGC 57.057 33.333 0.00 0.00 0.00 5.34
1755 1764 7.044117 CGGATCATATTTGTTCCAAAAATCACG 60.044 37.037 12.13 0.00 40.42 4.35
1756 1765 7.222611 CCGGATCATATTTGTTCCAAAAATCAC 59.777 37.037 0.00 0.00 40.42 3.06
1757 1766 7.123397 TCCGGATCATATTTGTTCCAAAAATCA 59.877 33.333 0.00 0.00 40.42 2.57
1758 1767 7.488322 TCCGGATCATATTTGTTCCAAAAATC 58.512 34.615 0.00 0.00 40.42 2.17
1759 1768 7.341769 TCTCCGGATCATATTTGTTCCAAAAAT 59.658 33.333 3.57 0.00 40.42 1.82
1760 1769 6.661377 TCTCCGGATCATATTTGTTCCAAAAA 59.339 34.615 3.57 0.00 40.42 1.94
1761 1770 6.184068 TCTCCGGATCATATTTGTTCCAAAA 58.816 36.000 3.57 0.00 40.42 2.44
1762 1771 5.750524 TCTCCGGATCATATTTGTTCCAAA 58.249 37.500 3.57 0.00 40.42 3.28
1763 1772 5.366482 TCTCCGGATCATATTTGTTCCAA 57.634 39.130 3.57 1.48 40.42 3.53
1764 1773 4.743651 GCTCTCCGGATCATATTTGTTCCA 60.744 45.833 3.57 0.00 40.42 3.53
1765 1774 3.748568 GCTCTCCGGATCATATTTGTTCC 59.251 47.826 3.57 3.79 38.06 3.62
1766 1775 4.636249 AGCTCTCCGGATCATATTTGTTC 58.364 43.478 3.57 0.00 0.00 3.18
1767 1776 4.696479 AGCTCTCCGGATCATATTTGTT 57.304 40.909 3.57 0.00 0.00 2.83
1768 1777 4.384056 CAAGCTCTCCGGATCATATTTGT 58.616 43.478 3.57 0.00 0.00 2.83
1769 1778 3.750130 CCAAGCTCTCCGGATCATATTTG 59.250 47.826 3.57 5.64 0.00 2.32
1770 1779 3.648067 TCCAAGCTCTCCGGATCATATTT 59.352 43.478 3.57 0.00 0.00 1.40
1771 1780 3.242867 TCCAAGCTCTCCGGATCATATT 58.757 45.455 3.57 0.00 0.00 1.28
1772 1781 2.830923 CTCCAAGCTCTCCGGATCATAT 59.169 50.000 3.57 0.00 0.00 1.78
1773 1782 2.242926 CTCCAAGCTCTCCGGATCATA 58.757 52.381 3.57 0.00 0.00 2.15
1774 1783 1.047002 CTCCAAGCTCTCCGGATCAT 58.953 55.000 3.57 0.00 0.00 2.45
1775 1784 0.324738 ACTCCAAGCTCTCCGGATCA 60.325 55.000 3.57 0.00 0.00 2.92
1776 1785 0.103937 CACTCCAAGCTCTCCGGATC 59.896 60.000 3.57 0.00 0.00 3.36
1777 1786 1.965754 GCACTCCAAGCTCTCCGGAT 61.966 60.000 3.57 0.00 0.00 4.18
1778 1787 2.650116 GCACTCCAAGCTCTCCGGA 61.650 63.158 2.93 2.93 0.00 5.14
1779 1788 2.125350 GCACTCCAAGCTCTCCGG 60.125 66.667 0.00 0.00 0.00 5.14
1780 1789 1.004560 TTGCACTCCAAGCTCTCCG 60.005 57.895 0.00 0.00 0.00 4.63
1781 1790 2.851798 CTTGCACTCCAAGCTCTCC 58.148 57.895 0.00 0.00 43.98 3.71
1788 1797 1.949525 GCTTCTTGACTTGCACTCCAA 59.050 47.619 0.00 0.00 0.00 3.53
1789 1798 1.597742 GCTTCTTGACTTGCACTCCA 58.402 50.000 0.00 0.00 0.00 3.86
1790 1799 0.877743 GGCTTCTTGACTTGCACTCC 59.122 55.000 0.00 0.00 0.00 3.85
1791 1800 1.803555 GAGGCTTCTTGACTTGCACTC 59.196 52.381 0.00 0.00 31.30 3.51
1792 1801 1.544314 GGAGGCTTCTTGACTTGCACT 60.544 52.381 0.00 0.00 31.30 4.40
1793 1802 0.877743 GGAGGCTTCTTGACTTGCAC 59.122 55.000 0.00 0.00 31.30 4.57
1794 1803 0.603707 CGGAGGCTTCTTGACTTGCA 60.604 55.000 0.00 0.00 31.30 4.08
1795 1804 0.320771 TCGGAGGCTTCTTGACTTGC 60.321 55.000 0.00 0.00 31.30 4.01
1796 1805 1.674221 CCTCGGAGGCTTCTTGACTTG 60.674 57.143 11.83 0.00 31.30 3.16
1797 1806 0.610687 CCTCGGAGGCTTCTTGACTT 59.389 55.000 11.83 0.00 31.30 3.01
1798 1807 1.261238 CCCTCGGAGGCTTCTTGACT 61.261 60.000 18.91 0.00 36.16 3.41
1799 1808 1.219393 CCCTCGGAGGCTTCTTGAC 59.781 63.158 18.91 0.00 32.73 3.18
1800 1809 3.713650 CCCTCGGAGGCTTCTTGA 58.286 61.111 18.91 0.00 32.73 3.02
2051 2060 2.646930 TCTCGCGGATACAGAAGGTTA 58.353 47.619 6.13 0.00 0.00 2.85
2052 2061 1.471119 TCTCGCGGATACAGAAGGTT 58.529 50.000 6.13 0.00 0.00 3.50
2053 2062 1.609555 GATCTCGCGGATACAGAAGGT 59.390 52.381 6.13 0.00 34.33 3.50
2054 2063 1.068194 GGATCTCGCGGATACAGAAGG 60.068 57.143 6.13 0.00 35.39 3.46
2055 2064 1.068194 GGGATCTCGCGGATACAGAAG 60.068 57.143 17.86 2.02 37.01 2.85
2056 2065 0.959553 GGGATCTCGCGGATACAGAA 59.040 55.000 17.86 0.00 37.01 3.02
2057 2066 0.179001 TGGGATCTCGCGGATACAGA 60.179 55.000 17.86 9.12 37.01 3.41
2058 2067 0.891373 ATGGGATCTCGCGGATACAG 59.109 55.000 17.86 4.05 37.01 2.74
2059 2068 0.888619 GATGGGATCTCGCGGATACA 59.111 55.000 17.86 15.22 37.01 2.29
2060 2069 1.178276 AGATGGGATCTCGCGGATAC 58.822 55.000 6.13 8.82 33.42 2.24
2061 2070 1.546029 CAAGATGGGATCTCGCGGATA 59.454 52.381 6.13 0.00 39.08 2.59
2062 2071 0.319728 CAAGATGGGATCTCGCGGAT 59.680 55.000 6.13 8.16 39.08 4.18
2063 2072 1.742146 CAAGATGGGATCTCGCGGA 59.258 57.895 6.13 2.40 39.08 5.54
2064 2073 1.301244 CCAAGATGGGATCTCGCGG 60.301 63.158 6.13 0.00 39.08 6.46
2065 2074 0.319383 CTCCAAGATGGGATCTCGCG 60.319 60.000 0.00 0.00 39.08 5.87
2066 2075 0.602372 GCTCCAAGATGGGATCTCGC 60.602 60.000 0.00 0.00 39.08 5.03
2067 2076 0.034616 GGCTCCAAGATGGGATCTCG 59.965 60.000 0.00 0.00 39.08 4.04
2068 2077 0.399833 GGGCTCCAAGATGGGATCTC 59.600 60.000 0.00 0.00 39.08 2.75
2069 2078 0.029267 AGGGCTCCAAGATGGGATCT 60.029 55.000 0.00 0.00 42.61 2.75
2070 2079 0.849417 AAGGGCTCCAAGATGGGATC 59.151 55.000 0.00 0.00 38.32 3.36
2071 2080 0.554792 CAAGGGCTCCAAGATGGGAT 59.445 55.000 0.00 0.00 38.32 3.85
2072 2081 2.001803 CAAGGGCTCCAAGATGGGA 58.998 57.895 0.00 0.00 38.32 4.37
2073 2082 1.755783 GCAAGGGCTCCAAGATGGG 60.756 63.158 0.00 0.00 38.32 4.00
2074 2083 1.755783 GGCAAGGGCTCCAAGATGG 60.756 63.158 0.00 0.00 40.87 3.51
2075 2084 2.117156 CGGCAAGGGCTCCAAGATG 61.117 63.158 0.00 0.00 40.87 2.90
2076 2085 2.273449 CGGCAAGGGCTCCAAGAT 59.727 61.111 0.00 0.00 40.87 2.40
2077 2086 4.033776 CCGGCAAGGGCTCCAAGA 62.034 66.667 0.00 0.00 40.87 3.02
2096 2105 4.332543 TTCCCCCTCCGGCAGAGT 62.333 66.667 0.00 0.00 41.47 3.24
2097 2106 3.474570 CTTCCCCCTCCGGCAGAG 61.475 72.222 0.00 0.00 42.83 3.35
2102 2111 4.426313 GGTTGCTTCCCCCTCCGG 62.426 72.222 0.00 0.00 0.00 5.14
2103 2112 3.646715 TGGTTGCTTCCCCCTCCG 61.647 66.667 0.00 0.00 0.00 4.63
2104 2113 2.035783 GTGGTTGCTTCCCCCTCC 59.964 66.667 0.00 0.00 0.00 4.30
2105 2114 2.359975 CGTGGTTGCTTCCCCCTC 60.360 66.667 0.00 0.00 0.00 4.30
2106 2115 3.966543 CCGTGGTTGCTTCCCCCT 61.967 66.667 0.00 0.00 0.00 4.79
2107 2116 3.920093 CTCCGTGGTTGCTTCCCCC 62.920 68.421 0.00 0.00 0.00 5.40
2108 2117 2.359975 CTCCGTGGTTGCTTCCCC 60.360 66.667 0.00 0.00 0.00 4.81
2109 2118 2.359975 CCTCCGTGGTTGCTTCCC 60.360 66.667 0.00 0.00 0.00 3.97
2110 2119 2.359975 CCCTCCGTGGTTGCTTCC 60.360 66.667 0.00 0.00 0.00 3.46
2111 2120 3.056328 GCCCTCCGTGGTTGCTTC 61.056 66.667 0.00 0.00 0.00 3.86
2112 2121 4.660938 GGCCCTCCGTGGTTGCTT 62.661 66.667 0.00 0.00 0.00 3.91
2115 2124 1.987855 TAGAGGCCCTCCGTGGTTG 60.988 63.158 7.26 0.00 37.47 3.77
2116 2125 1.988406 GTAGAGGCCCTCCGTGGTT 60.988 63.158 7.26 0.00 37.47 3.67
2117 2126 2.363925 GTAGAGGCCCTCCGTGGT 60.364 66.667 7.26 0.00 37.47 4.16
2118 2127 1.749334 GATGTAGAGGCCCTCCGTGG 61.749 65.000 7.26 0.00 37.47 4.94
2119 2128 1.043116 TGATGTAGAGGCCCTCCGTG 61.043 60.000 7.26 0.00 37.47 4.94
2120 2129 0.325296 TTGATGTAGAGGCCCTCCGT 60.325 55.000 7.26 0.00 37.47 4.69
2121 2130 0.105039 GTTGATGTAGAGGCCCTCCG 59.895 60.000 7.26 0.00 37.47 4.63
2122 2131 1.204146 TGTTGATGTAGAGGCCCTCC 58.796 55.000 7.26 0.00 0.00 4.30
2123 2132 2.224402 GGATGTTGATGTAGAGGCCCTC 60.224 54.545 1.26 1.26 0.00 4.30
2124 2133 1.771255 GGATGTTGATGTAGAGGCCCT 59.229 52.381 0.00 0.00 0.00 5.19
2125 2134 1.771255 AGGATGTTGATGTAGAGGCCC 59.229 52.381 0.00 0.00 0.00 5.80
2126 2135 3.209410 CAAGGATGTTGATGTAGAGGCC 58.791 50.000 0.00 0.00 0.00 5.19
2127 2136 2.615912 GCAAGGATGTTGATGTAGAGGC 59.384 50.000 0.00 0.00 0.00 4.70
2128 2137 3.209410 GGCAAGGATGTTGATGTAGAGG 58.791 50.000 0.00 0.00 0.00 3.69
2129 2138 3.209410 GGGCAAGGATGTTGATGTAGAG 58.791 50.000 0.00 0.00 0.00 2.43
2130 2139 2.092429 GGGGCAAGGATGTTGATGTAGA 60.092 50.000 0.00 0.00 0.00 2.59
2131 2140 2.092212 AGGGGCAAGGATGTTGATGTAG 60.092 50.000 0.00 0.00 0.00 2.74
2132 2141 1.922447 AGGGGCAAGGATGTTGATGTA 59.078 47.619 0.00 0.00 0.00 2.29
2133 2142 0.706433 AGGGGCAAGGATGTTGATGT 59.294 50.000 0.00 0.00 0.00 3.06
2134 2143 1.396653 GAGGGGCAAGGATGTTGATG 58.603 55.000 0.00 0.00 0.00 3.07
2135 2144 0.259938 GGAGGGGCAAGGATGTTGAT 59.740 55.000 0.00 0.00 0.00 2.57
2136 2145 1.691219 GGAGGGGCAAGGATGTTGA 59.309 57.895 0.00 0.00 0.00 3.18
2137 2146 1.750399 CGGAGGGGCAAGGATGTTG 60.750 63.158 0.00 0.00 0.00 3.33
2138 2147 1.281925 ATCGGAGGGGCAAGGATGTT 61.282 55.000 0.00 0.00 0.00 2.71
2139 2148 1.694169 ATCGGAGGGGCAAGGATGT 60.694 57.895 0.00 0.00 0.00 3.06
2140 2149 1.228063 CATCGGAGGGGCAAGGATG 60.228 63.158 0.00 0.00 0.00 3.51
2141 2150 1.384502 TCATCGGAGGGGCAAGGAT 60.385 57.895 0.00 0.00 0.00 3.24
2142 2151 2.040442 TCATCGGAGGGGCAAGGA 59.960 61.111 0.00 0.00 0.00 3.36
2143 2152 1.915078 AACTCATCGGAGGGGCAAGG 61.915 60.000 0.00 0.00 45.81 3.61
2144 2153 0.745845 CAACTCATCGGAGGGGCAAG 60.746 60.000 0.00 0.00 45.81 4.01
2145 2154 1.299648 CAACTCATCGGAGGGGCAA 59.700 57.895 0.00 0.00 45.81 4.52
2146 2155 1.918293 ACAACTCATCGGAGGGGCA 60.918 57.895 0.00 0.00 45.81 5.36
2147 2156 1.450312 CACAACTCATCGGAGGGGC 60.450 63.158 0.00 0.00 45.81 5.80
2148 2157 0.176680 CTCACAACTCATCGGAGGGG 59.823 60.000 0.00 0.00 45.81 4.79
2149 2158 0.898320 ACTCACAACTCATCGGAGGG 59.102 55.000 0.00 0.00 45.81 4.30
2150 2159 2.755655 ACTACTCACAACTCATCGGAGG 59.244 50.000 0.00 0.00 45.81 4.30
2151 2160 4.442375 AACTACTCACAACTCATCGGAG 57.558 45.455 0.00 0.00 46.96 4.63
2152 2161 4.866508 AAACTACTCACAACTCATCGGA 57.133 40.909 0.00 0.00 0.00 4.55
2153 2162 4.863131 GGTAAACTACTCACAACTCATCGG 59.137 45.833 0.00 0.00 0.00 4.18
2154 2163 5.345202 GTGGTAAACTACTCACAACTCATCG 59.655 44.000 0.00 0.00 33.17 3.84
2155 2164 6.220930 TGTGGTAAACTACTCACAACTCATC 58.779 40.000 0.00 0.00 37.12 2.92
2156 2165 6.041637 TCTGTGGTAAACTACTCACAACTCAT 59.958 38.462 0.00 0.00 38.47 2.90
2157 2166 5.361571 TCTGTGGTAAACTACTCACAACTCA 59.638 40.000 0.00 0.00 38.47 3.41
2158 2167 5.690857 GTCTGTGGTAAACTACTCACAACTC 59.309 44.000 0.00 0.00 38.47 3.01
2159 2168 5.452917 GGTCTGTGGTAAACTACTCACAACT 60.453 44.000 0.00 0.00 38.47 3.16
2160 2169 4.748600 GGTCTGTGGTAAACTACTCACAAC 59.251 45.833 0.00 0.00 38.47 3.32
2161 2170 4.652421 AGGTCTGTGGTAAACTACTCACAA 59.348 41.667 0.00 0.00 38.47 3.33
2162 2171 4.220724 AGGTCTGTGGTAAACTACTCACA 58.779 43.478 0.00 0.00 37.45 3.58
2163 2172 4.868314 AGGTCTGTGGTAAACTACTCAC 57.132 45.455 0.00 0.00 33.39 3.51
2164 2173 4.456911 CGTAGGTCTGTGGTAAACTACTCA 59.543 45.833 0.00 0.00 31.19 3.41
2165 2174 4.979388 CGTAGGTCTGTGGTAAACTACTC 58.021 47.826 0.00 0.00 31.19 2.59
2183 2192 5.979288 AGCTAATAACTATGGACCCGTAG 57.021 43.478 12.51 12.51 40.39 3.51
2184 2193 6.782986 TCTAGCTAATAACTATGGACCCGTA 58.217 40.000 0.00 0.00 0.00 4.02
2185 2194 5.638133 TCTAGCTAATAACTATGGACCCGT 58.362 41.667 0.00 0.00 0.00 5.28
2186 2195 6.405953 CCATCTAGCTAATAACTATGGACCCG 60.406 46.154 0.00 0.00 0.00 5.28
2187 2196 6.630638 GCCATCTAGCTAATAACTATGGACCC 60.631 46.154 14.33 0.00 0.00 4.46
2188 2197 6.155393 AGCCATCTAGCTAATAACTATGGACC 59.845 42.308 14.33 0.00 42.70 4.46
2189 2198 7.176589 AGCCATCTAGCTAATAACTATGGAC 57.823 40.000 14.33 8.64 42.70 4.02
2190 2199 7.676043 AGAAGCCATCTAGCTAATAACTATGGA 59.324 37.037 14.33 0.00 44.11 3.41
2191 2200 7.846066 AGAAGCCATCTAGCTAATAACTATGG 58.154 38.462 0.00 3.21 44.11 2.74
2192 2201 9.364989 GAAGAAGCCATCTAGCTAATAACTATG 57.635 37.037 0.00 0.00 44.11 2.23
2193 2202 9.320295 AGAAGAAGCCATCTAGCTAATAACTAT 57.680 33.333 0.00 0.00 44.11 2.12
2194 2203 8.713708 AGAAGAAGCCATCTAGCTAATAACTA 57.286 34.615 0.00 0.00 44.11 2.24
2195 2204 7.508977 AGAGAAGAAGCCATCTAGCTAATAACT 59.491 37.037 0.00 0.00 44.11 2.24
2196 2205 7.666623 AGAGAAGAAGCCATCTAGCTAATAAC 58.333 38.462 0.00 0.00 44.11 1.89
2197 2206 7.728083 AGAGAGAAGAAGCCATCTAGCTAATAA 59.272 37.037 0.00 0.00 44.11 1.40
2198 2207 7.237982 AGAGAGAAGAAGCCATCTAGCTAATA 58.762 38.462 0.00 0.00 44.11 0.98
2199 2208 6.077322 AGAGAGAAGAAGCCATCTAGCTAAT 58.923 40.000 0.00 0.00 44.11 1.73
2200 2209 5.454062 AGAGAGAAGAAGCCATCTAGCTAA 58.546 41.667 0.00 0.00 44.11 3.09
2201 2210 5.060427 AGAGAGAAGAAGCCATCTAGCTA 57.940 43.478 0.00 0.00 44.11 3.32
2203 2212 4.670896 AAGAGAGAAGAAGCCATCTAGC 57.329 45.455 0.00 0.00 37.42 3.42
2204 2213 6.315891 CCAAAAAGAGAGAAGAAGCCATCTAG 59.684 42.308 0.00 0.00 37.42 2.43
2205 2214 6.013379 TCCAAAAAGAGAGAAGAAGCCATCTA 60.013 38.462 0.00 0.00 37.42 1.98
2206 2215 5.008980 CCAAAAAGAGAGAAGAAGCCATCT 58.991 41.667 0.00 0.00 41.32 2.90
2207 2216 5.006386 TCCAAAAAGAGAGAAGAAGCCATC 58.994 41.667 0.00 0.00 0.00 3.51
2208 2217 4.990526 TCCAAAAAGAGAGAAGAAGCCAT 58.009 39.130 0.00 0.00 0.00 4.40
2209 2218 4.437682 TCCAAAAAGAGAGAAGAAGCCA 57.562 40.909 0.00 0.00 0.00 4.75
2210 2219 5.252547 AGATCCAAAAAGAGAGAAGAAGCC 58.747 41.667 0.00 0.00 0.00 4.35
2211 2220 5.936956 TGAGATCCAAAAAGAGAGAAGAAGC 59.063 40.000 0.00 0.00 0.00 3.86
2212 2221 7.976135 TTGAGATCCAAAAAGAGAGAAGAAG 57.024 36.000 0.00 0.00 0.00 2.85
2213 2222 9.442047 GTATTGAGATCCAAAAAGAGAGAAGAA 57.558 33.333 1.49 0.00 38.43 2.52
2214 2223 8.597167 TGTATTGAGATCCAAAAAGAGAGAAGA 58.403 33.333 1.49 0.00 38.43 2.87
2215 2224 8.783833 TGTATTGAGATCCAAAAAGAGAGAAG 57.216 34.615 1.49 0.00 38.43 2.85
2216 2225 9.745018 ATTGTATTGAGATCCAAAAAGAGAGAA 57.255 29.630 1.49 0.00 38.43 2.87
2217 2226 9.170734 CATTGTATTGAGATCCAAAAAGAGAGA 57.829 33.333 1.49 0.00 38.43 3.10
2218 2227 8.954350 ACATTGTATTGAGATCCAAAAAGAGAG 58.046 33.333 1.49 0.00 38.43 3.20
2219 2228 8.868522 ACATTGTATTGAGATCCAAAAAGAGA 57.131 30.769 1.49 0.00 38.43 3.10
2220 2229 9.565213 GAACATTGTATTGAGATCCAAAAAGAG 57.435 33.333 0.00 0.00 38.43 2.85
2221 2230 9.300681 AGAACATTGTATTGAGATCCAAAAAGA 57.699 29.630 0.00 0.00 38.43 2.52
2222 2231 9.565213 GAGAACATTGTATTGAGATCCAAAAAG 57.435 33.333 0.00 0.00 38.43 2.27
2223 2232 8.522830 GGAGAACATTGTATTGAGATCCAAAAA 58.477 33.333 0.00 0.00 38.43 1.94
2224 2233 7.122650 GGGAGAACATTGTATTGAGATCCAAAA 59.877 37.037 0.00 0.00 38.43 2.44
2225 2234 6.603201 GGGAGAACATTGTATTGAGATCCAAA 59.397 38.462 0.00 0.00 38.43 3.28
2226 2235 6.122277 GGGAGAACATTGTATTGAGATCCAA 58.878 40.000 0.00 0.00 39.41 3.53
2227 2236 5.397899 GGGGAGAACATTGTATTGAGATCCA 60.398 44.000 0.00 0.00 0.00 3.41
2228 2237 5.066593 GGGGAGAACATTGTATTGAGATCC 58.933 45.833 0.00 0.00 0.00 3.36
2229 2238 5.066593 GGGGGAGAACATTGTATTGAGATC 58.933 45.833 0.00 0.00 0.00 2.75
2230 2239 4.728860 AGGGGGAGAACATTGTATTGAGAT 59.271 41.667 0.00 0.00 0.00 2.75
2231 2240 4.111577 AGGGGGAGAACATTGTATTGAGA 58.888 43.478 0.00 0.00 0.00 3.27
2232 2241 4.164988 AGAGGGGGAGAACATTGTATTGAG 59.835 45.833 0.00 0.00 0.00 3.02
2233 2242 4.111577 AGAGGGGGAGAACATTGTATTGA 58.888 43.478 0.00 0.00 0.00 2.57
2234 2243 4.164988 AGAGAGGGGGAGAACATTGTATTG 59.835 45.833 0.00 0.00 0.00 1.90
2235 2244 4.375313 AGAGAGGGGGAGAACATTGTATT 58.625 43.478 0.00 0.00 0.00 1.89
2236 2245 4.014273 AGAGAGGGGGAGAACATTGTAT 57.986 45.455 0.00 0.00 0.00 2.29
2237 2246 3.491766 AGAGAGGGGGAGAACATTGTA 57.508 47.619 0.00 0.00 0.00 2.41
2238 2247 2.307098 CAAGAGAGGGGGAGAACATTGT 59.693 50.000 0.00 0.00 0.00 2.71
2239 2248 2.307098 ACAAGAGAGGGGGAGAACATTG 59.693 50.000 0.00 0.00 0.00 2.82
2240 2249 2.307098 CACAAGAGAGGGGGAGAACATT 59.693 50.000 0.00 0.00 0.00 2.71
2241 2250 1.912043 CACAAGAGAGGGGGAGAACAT 59.088 52.381 0.00 0.00 0.00 2.71
2242 2251 1.352083 CACAAGAGAGGGGGAGAACA 58.648 55.000 0.00 0.00 0.00 3.18
2243 2252 0.615850 CCACAAGAGAGGGGGAGAAC 59.384 60.000 0.00 0.00 0.00 3.01
2244 2253 0.491823 TCCACAAGAGAGGGGGAGAA 59.508 55.000 0.00 0.00 0.00 2.87
2245 2254 0.041833 CTCCACAAGAGAGGGGGAGA 59.958 60.000 4.70 0.00 46.38 3.71
2246 2255 2.601664 CTCCACAAGAGAGGGGGAG 58.398 63.158 0.00 0.00 46.50 4.30
2247 2256 4.896979 CTCCACAAGAGAGGGGGA 57.103 61.111 0.00 0.00 46.50 4.81
2254 2263 6.083098 ACATCGAATAGATCTCCACAAGAG 57.917 41.667 0.00 0.00 44.75 2.85
2255 2264 7.582667 TTACATCGAATAGATCTCCACAAGA 57.417 36.000 0.00 0.00 37.52 3.02
2256 2265 8.303156 AGATTACATCGAATAGATCTCCACAAG 58.697 37.037 0.00 0.00 37.52 3.16
2257 2266 8.183104 AGATTACATCGAATAGATCTCCACAA 57.817 34.615 0.00 0.00 37.52 3.33
2258 2267 7.667635 AGAGATTACATCGAATAGATCTCCACA 59.332 37.037 19.76 0.00 40.02 4.17
2259 2268 8.050778 AGAGATTACATCGAATAGATCTCCAC 57.949 38.462 19.76 0.00 40.02 4.02
2260 2269 8.642935 AAGAGATTACATCGAATAGATCTCCA 57.357 34.615 19.76 0.00 40.02 3.86
2261 2270 9.921637 AAAAGAGATTACATCGAATAGATCTCC 57.078 33.333 19.76 9.25 40.02 3.71
2264 2273 9.804547 GCAAAAAGAGATTACATCGAATAGATC 57.195 33.333 0.00 0.00 37.52 2.75
2265 2274 8.491152 CGCAAAAAGAGATTACATCGAATAGAT 58.509 33.333 0.00 0.00 41.01 1.98
2266 2275 7.042725 CCGCAAAAAGAGATTACATCGAATAGA 60.043 37.037 0.00 0.00 0.00 1.98
2267 2276 7.065894 CCGCAAAAAGAGATTACATCGAATAG 58.934 38.462 0.00 0.00 0.00 1.73
2268 2277 6.537301 ACCGCAAAAAGAGATTACATCGAATA 59.463 34.615 0.00 0.00 0.00 1.75
2269 2278 5.354234 ACCGCAAAAAGAGATTACATCGAAT 59.646 36.000 0.00 0.00 0.00 3.34
2270 2279 4.693566 ACCGCAAAAAGAGATTACATCGAA 59.306 37.500 0.00 0.00 0.00 3.71
2271 2280 4.092821 CACCGCAAAAAGAGATTACATCGA 59.907 41.667 0.00 0.00 0.00 3.59
2272 2281 4.142902 ACACCGCAAAAAGAGATTACATCG 60.143 41.667 0.00 0.00 0.00 3.84
2273 2282 5.088739 CACACCGCAAAAAGAGATTACATC 58.911 41.667 0.00 0.00 0.00 3.06
2274 2283 4.518970 ACACACCGCAAAAAGAGATTACAT 59.481 37.500 0.00 0.00 0.00 2.29
2275 2284 3.880490 ACACACCGCAAAAAGAGATTACA 59.120 39.130 0.00 0.00 0.00 2.41
2276 2285 4.483476 ACACACCGCAAAAAGAGATTAC 57.517 40.909 0.00 0.00 0.00 1.89
2277 2286 5.163602 ACAAACACACCGCAAAAAGAGATTA 60.164 36.000 0.00 0.00 0.00 1.75
2278 2287 4.111916 CAAACACACCGCAAAAAGAGATT 58.888 39.130 0.00 0.00 0.00 2.40
2279 2288 3.130340 ACAAACACACCGCAAAAAGAGAT 59.870 39.130 0.00 0.00 0.00 2.75
2280 2289 2.490115 ACAAACACACCGCAAAAAGAGA 59.510 40.909 0.00 0.00 0.00 3.10
2281 2290 2.851824 GACAAACACACCGCAAAAAGAG 59.148 45.455 0.00 0.00 0.00 2.85
2282 2291 2.729467 CGACAAACACACCGCAAAAAGA 60.729 45.455 0.00 0.00 0.00 2.52
2283 2292 1.581602 CGACAAACACACCGCAAAAAG 59.418 47.619 0.00 0.00 0.00 2.27
2284 2293 1.199327 TCGACAAACACACCGCAAAAA 59.801 42.857 0.00 0.00 0.00 1.94
2285 2294 0.803117 TCGACAAACACACCGCAAAA 59.197 45.000 0.00 0.00 0.00 2.44
2286 2295 0.375454 CTCGACAAACACACCGCAAA 59.625 50.000 0.00 0.00 0.00 3.68
2287 2296 0.460459 TCTCGACAAACACACCGCAA 60.460 50.000 0.00 0.00 0.00 4.85
2288 2297 0.249699 ATCTCGACAAACACACCGCA 60.250 50.000 0.00 0.00 0.00 5.69
2289 2298 0.438830 GATCTCGACAAACACACCGC 59.561 55.000 0.00 0.00 0.00 5.68
2290 2299 1.068474 GGATCTCGACAAACACACCG 58.932 55.000 0.00 0.00 0.00 4.94
2291 2300 1.068474 CGGATCTCGACAAACACACC 58.932 55.000 0.00 0.00 42.43 4.16
2292 2301 2.060326 TCGGATCTCGACAAACACAC 57.940 50.000 2.65 0.00 43.74 3.82
2302 2311 2.138320 CCCACAATTCATCGGATCTCG 58.862 52.381 0.00 0.00 40.90 4.04
2303 2312 3.199880 ACCCACAATTCATCGGATCTC 57.800 47.619 0.00 0.00 0.00 2.75
2304 2313 3.652057 AACCCACAATTCATCGGATCT 57.348 42.857 0.00 0.00 0.00 2.75
2305 2314 5.530915 TCATAAACCCACAATTCATCGGATC 59.469 40.000 0.00 0.00 0.00 3.36
2306 2315 5.445069 TCATAAACCCACAATTCATCGGAT 58.555 37.500 0.00 0.00 0.00 4.18
2307 2316 4.849518 TCATAAACCCACAATTCATCGGA 58.150 39.130 0.00 0.00 0.00 4.55
2308 2317 5.299028 TGATCATAAACCCACAATTCATCGG 59.701 40.000 0.00 0.00 0.00 4.18
2309 2318 6.375945 TGATCATAAACCCACAATTCATCG 57.624 37.500 0.00 0.00 0.00 3.84
2310 2319 7.775120 ACTTGATCATAAACCCACAATTCATC 58.225 34.615 0.00 0.00 0.00 2.92
2311 2320 7.722949 ACTTGATCATAAACCCACAATTCAT 57.277 32.000 0.00 0.00 0.00 2.57
2312 2321 7.537596 AACTTGATCATAAACCCACAATTCA 57.462 32.000 0.00 0.00 0.00 2.57
2315 2324 9.479549 AGATAAACTTGATCATAAACCCACAAT 57.520 29.630 0.00 0.00 0.00 2.71
2316 2325 8.877864 AGATAAACTTGATCATAAACCCACAA 57.122 30.769 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.