Multiple sequence alignment - TraesCS6B01G195900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G195900 chr6B 100.000 2348 0 0 1 2348 232073918 232076265 0.000000e+00 4337.0
1 TraesCS6B01G195900 chr6B 94.674 1596 78 5 95 1689 79247719 79246130 0.000000e+00 2470.0
2 TraesCS6B01G195900 chr6B 86.514 1698 199 14 1 1690 695921010 695922685 0.000000e+00 1840.0
3 TraesCS6B01G195900 chr6B 85.094 1704 233 14 2 1689 715763260 715761562 0.000000e+00 1720.0
4 TraesCS6B01G195900 chr6B 86.688 308 41 0 1382 1689 417217027 417216720 2.230000e-90 342.0
5 TraesCS6B01G195900 chr6B 91.064 235 21 0 2114 2348 201415570 201415804 3.770000e-83 318.0
6 TraesCS6B01G195900 chr7B 90.560 1695 146 13 1 1688 38632617 38630930 0.000000e+00 2231.0
7 TraesCS6B01G195900 chr1B 89.433 1694 171 7 1 1689 613010097 613008407 0.000000e+00 2130.0
8 TraesCS6B01G195900 chr1B 85.192 1695 232 14 5 1689 592573619 592571934 0.000000e+00 1722.0
9 TraesCS6B01G195900 chr5B 86.718 1694 210 12 1 1689 548384029 548382346 0.000000e+00 1868.0
10 TraesCS6B01G195900 chr2B 86.903 1611 196 12 87 1689 748211381 748212984 0.000000e+00 1792.0
11 TraesCS6B01G195900 chr2B 92.017 238 17 1 2111 2348 240286370 240286605 1.340000e-87 333.0
12 TraesCS6B01G195900 chr2B 91.176 68 2 4 2106 2172 359134760 359134824 3.210000e-14 89.8
13 TraesCS6B01G195900 chr3B 84.965 1696 238 14 1 1690 106936236 106937920 0.000000e+00 1703.0
14 TraesCS6B01G195900 chr7A 92.623 244 17 1 2106 2348 641977682 641977925 1.340000e-92 350.0
15 TraesCS6B01G195900 chr7A 92.276 246 19 0 2103 2348 693996049 693995804 1.340000e-92 350.0
16 TraesCS6B01G195900 chr6A 92.469 239 17 1 2110 2348 595924257 595924020 8.040000e-90 340.0
17 TraesCS6B01G195900 chr6A 80.000 140 21 5 2111 2248 431224926 431225060 1.920000e-16 97.1
18 TraesCS6B01G195900 chr7D 86.920 237 29 2 2114 2348 536012242 536012006 4.980000e-67 265.0
19 TraesCS6B01G195900 chr3D 84.722 216 29 4 1475 1689 500310926 500310714 1.830000e-51 213.0
20 TraesCS6B01G195900 chr3D 83.182 220 27 7 1472 1689 488575958 488575747 2.380000e-45 193.0
21 TraesCS6B01G195900 chr5A 91.045 67 4 2 2107 2172 650828052 650827987 3.210000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G195900 chr6B 232073918 232076265 2347 False 4337 4337 100.000 1 2348 1 chr6B.!!$F2 2347
1 TraesCS6B01G195900 chr6B 79246130 79247719 1589 True 2470 2470 94.674 95 1689 1 chr6B.!!$R1 1594
2 TraesCS6B01G195900 chr6B 695921010 695922685 1675 False 1840 1840 86.514 1 1690 1 chr6B.!!$F3 1689
3 TraesCS6B01G195900 chr6B 715761562 715763260 1698 True 1720 1720 85.094 2 1689 1 chr6B.!!$R3 1687
4 TraesCS6B01G195900 chr7B 38630930 38632617 1687 True 2231 2231 90.560 1 1688 1 chr7B.!!$R1 1687
5 TraesCS6B01G195900 chr1B 613008407 613010097 1690 True 2130 2130 89.433 1 1689 1 chr1B.!!$R2 1688
6 TraesCS6B01G195900 chr1B 592571934 592573619 1685 True 1722 1722 85.192 5 1689 1 chr1B.!!$R1 1684
7 TraesCS6B01G195900 chr5B 548382346 548384029 1683 True 1868 1868 86.718 1 1689 1 chr5B.!!$R1 1688
8 TraesCS6B01G195900 chr2B 748211381 748212984 1603 False 1792 1792 86.903 87 1689 1 chr2B.!!$F3 1602
9 TraesCS6B01G195900 chr3B 106936236 106937920 1684 False 1703 1703 84.965 1 1690 1 chr3B.!!$F1 1689

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
741 758 0.326143 AAGTTGTTTGGGCCTTGGGT 60.326 50.0 4.53 0.0 0.0 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2210 2248 0.033642 TGGGTGTTGTAATGTCGCGA 59.966 50.0 3.71 3.71 0.0 5.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 57 3.805066 TGTTGTGAATCCTGGATTGGA 57.195 42.857 25.89 9.85 40.82 3.53
69 72 3.194116 GGATTGGAAATGCAGCTTCTTCA 59.806 43.478 10.28 0.43 0.00 3.02
73 84 2.440409 GAAATGCAGCTTCTTCAGGGA 58.560 47.619 0.00 0.00 0.00 4.20
79 91 0.892063 AGCTTCTTCAGGGAGTCGTC 59.108 55.000 0.00 0.00 0.00 4.20
182 195 2.766313 ACTTGACAAGCATCGTAAGCA 58.234 42.857 15.24 0.00 37.18 3.91
248 261 4.020662 GGTAAAATGGTCCAGAATTTGCCA 60.021 41.667 20.38 0.00 36.26 4.92
633 650 5.720371 TGGTGTGGGTGATAATTTCTTTG 57.280 39.130 0.00 0.00 0.00 2.77
706 723 4.988716 TGGCCTCGTGGTCGACCT 62.989 66.667 33.39 0.00 41.88 3.85
741 758 0.326143 AAGTTGTTTGGGCCTTGGGT 60.326 50.000 4.53 0.00 0.00 4.51
1012 1031 2.644676 CTAGAGTCATGTGGAGGACGA 58.355 52.381 0.00 0.00 37.97 4.20
1018 1037 0.681733 CATGTGGAGGACGATAGGGG 59.318 60.000 0.00 0.00 43.77 4.79
1068 1087 7.081349 CGAACAATATTTGGCAGTACTTTTCA 58.919 34.615 0.00 0.00 34.12 2.69
1100 1119 2.416638 CTTCCTTCCAGATGGGGAGAT 58.583 52.381 0.00 0.00 46.53 2.75
1139 1158 3.123620 CGCTCTCTGTTGGGCTGC 61.124 66.667 0.00 0.00 0.00 5.25
1359 1389 2.421619 GTCAACTGAAGAGCAAGAGGG 58.578 52.381 0.00 0.00 0.00 4.30
1360 1390 1.349026 TCAACTGAAGAGCAAGAGGGG 59.651 52.381 0.00 0.00 0.00 4.79
1361 1391 0.695347 AACTGAAGAGCAAGAGGGGG 59.305 55.000 0.00 0.00 0.00 5.40
1367 1404 1.376037 GAGCAAGAGGGGGTTGTCG 60.376 63.158 0.00 0.00 0.00 4.35
1380 1417 4.742201 TGTCGCTCCAGCTTCGCC 62.742 66.667 0.00 0.00 39.32 5.54
1404 1441 2.417787 GCCTGGGATTTGCTGTCATTTC 60.418 50.000 0.00 0.00 0.00 2.17
1410 1447 4.949856 GGGATTTGCTGTCATTTCTTCCTA 59.050 41.667 0.00 0.00 0.00 2.94
1433 1470 3.749609 GTCCTTTTGGTTTCGCTAGCTTA 59.250 43.478 13.93 0.00 41.38 3.09
1459 1496 4.919774 TGTGAATGGTTTTAGGCTCCTA 57.080 40.909 0.00 0.00 0.00 2.94
1507 1544 2.105821 TGGTGCTGGTAGCTTAACTTGT 59.894 45.455 0.00 0.00 42.97 3.16
1513 1550 7.041984 GGTGCTGGTAGCTTAACTTGTATATTC 60.042 40.741 0.00 0.00 42.97 1.75
1656 1694 7.478520 ACTATTGTATTTCCGTTATGTGAGC 57.521 36.000 0.00 0.00 0.00 4.26
1675 1713 1.341080 CAATGGAAAGGGGTTGTGCT 58.659 50.000 0.00 0.00 0.00 4.40
1676 1714 1.693606 CAATGGAAAGGGGTTGTGCTT 59.306 47.619 0.00 0.00 0.00 3.91
1707 1745 4.817318 AAAGTTTGAAAGGCTGAAACCA 57.183 36.364 11.41 0.00 31.21 3.67
1708 1746 5.357742 AAAGTTTGAAAGGCTGAAACCAT 57.642 34.783 11.41 2.17 31.21 3.55
1709 1747 4.326504 AGTTTGAAAGGCTGAAACCATG 57.673 40.909 11.41 0.00 31.21 3.66
1710 1748 2.802247 GTTTGAAAGGCTGAAACCATGC 59.198 45.455 0.00 0.00 0.00 4.06
1711 1749 1.702182 TGAAAGGCTGAAACCATGCA 58.298 45.000 0.00 0.00 0.00 3.96
1712 1750 1.614903 TGAAAGGCTGAAACCATGCAG 59.385 47.619 0.00 0.00 35.28 4.41
1718 1756 2.857592 CTGAAACCATGCAGCATACC 57.142 50.000 7.82 0.00 0.00 2.73
1719 1757 2.093890 CTGAAACCATGCAGCATACCA 58.906 47.619 7.82 1.33 0.00 3.25
1720 1758 2.492881 CTGAAACCATGCAGCATACCAA 59.507 45.455 7.82 0.00 0.00 3.67
1721 1759 3.098377 TGAAACCATGCAGCATACCAAT 58.902 40.909 7.82 0.00 0.00 3.16
1722 1760 4.276642 TGAAACCATGCAGCATACCAATA 58.723 39.130 7.82 0.00 0.00 1.90
1723 1761 4.708909 TGAAACCATGCAGCATACCAATAA 59.291 37.500 7.82 0.00 0.00 1.40
1724 1762 5.186603 TGAAACCATGCAGCATACCAATAAA 59.813 36.000 7.82 0.00 0.00 1.40
1725 1763 4.924305 ACCATGCAGCATACCAATAAAG 57.076 40.909 7.82 0.00 0.00 1.85
1726 1764 4.280819 ACCATGCAGCATACCAATAAAGT 58.719 39.130 7.82 0.00 0.00 2.66
1727 1765 5.445069 ACCATGCAGCATACCAATAAAGTA 58.555 37.500 7.82 0.00 0.00 2.24
1728 1766 5.890985 ACCATGCAGCATACCAATAAAGTAA 59.109 36.000 7.82 0.00 0.00 2.24
1729 1767 6.379703 ACCATGCAGCATACCAATAAAGTAAA 59.620 34.615 7.82 0.00 0.00 2.01
1730 1768 7.093552 ACCATGCAGCATACCAATAAAGTAAAA 60.094 33.333 7.82 0.00 0.00 1.52
1731 1769 7.436080 CCATGCAGCATACCAATAAAGTAAAAG 59.564 37.037 7.82 0.00 0.00 2.27
1732 1770 7.695480 TGCAGCATACCAATAAAGTAAAAGA 57.305 32.000 0.00 0.00 0.00 2.52
1733 1771 8.116651 TGCAGCATACCAATAAAGTAAAAGAA 57.883 30.769 0.00 0.00 0.00 2.52
1734 1772 8.026607 TGCAGCATACCAATAAAGTAAAAGAAC 58.973 33.333 0.00 0.00 0.00 3.01
1735 1773 8.244113 GCAGCATACCAATAAAGTAAAAGAACT 58.756 33.333 0.00 0.00 0.00 3.01
1736 1774 9.774742 CAGCATACCAATAAAGTAAAAGAACTC 57.225 33.333 0.00 0.00 0.00 3.01
1737 1775 8.665685 AGCATACCAATAAAGTAAAAGAACTCG 58.334 33.333 0.00 0.00 0.00 4.18
1738 1776 7.428472 GCATACCAATAAAGTAAAAGAACTCGC 59.572 37.037 0.00 0.00 0.00 5.03
1739 1777 8.665685 CATACCAATAAAGTAAAAGAACTCGCT 58.334 33.333 0.00 0.00 0.00 4.93
1740 1778 9.880157 ATACCAATAAAGTAAAAGAACTCGCTA 57.120 29.630 0.00 0.00 0.00 4.26
1741 1779 8.026341 ACCAATAAAGTAAAAGAACTCGCTAC 57.974 34.615 0.00 0.00 0.00 3.58
1742 1780 7.658575 ACCAATAAAGTAAAAGAACTCGCTACA 59.341 33.333 0.00 0.00 0.00 2.74
1743 1781 8.500773 CCAATAAAGTAAAAGAACTCGCTACAA 58.499 33.333 0.00 0.00 0.00 2.41
1744 1782 9.314501 CAATAAAGTAAAAGAACTCGCTACAAC 57.685 33.333 0.00 0.00 0.00 3.32
1745 1783 6.913873 AAAGTAAAAGAACTCGCTACAACA 57.086 33.333 0.00 0.00 0.00 3.33
1746 1784 6.913873 AAGTAAAAGAACTCGCTACAACAA 57.086 33.333 0.00 0.00 0.00 2.83
1747 1785 6.913873 AGTAAAAGAACTCGCTACAACAAA 57.086 33.333 0.00 0.00 0.00 2.83
1748 1786 7.492352 AGTAAAAGAACTCGCTACAACAAAT 57.508 32.000 0.00 0.00 0.00 2.32
1749 1787 7.927048 AGTAAAAGAACTCGCTACAACAAATT 58.073 30.769 0.00 0.00 0.00 1.82
1750 1788 7.855904 AGTAAAAGAACTCGCTACAACAAATTG 59.144 33.333 0.00 0.00 41.98 2.32
1808 1846 9.462606 AAGGTAATAAGTATTTTCTTCTGGGTG 57.537 33.333 0.00 0.00 0.00 4.61
1809 1847 7.556635 AGGTAATAAGTATTTTCTTCTGGGTGC 59.443 37.037 0.00 0.00 0.00 5.01
1810 1848 7.556635 GGTAATAAGTATTTTCTTCTGGGTGCT 59.443 37.037 0.00 0.00 0.00 4.40
1811 1849 9.609346 GTAATAAGTATTTTCTTCTGGGTGCTA 57.391 33.333 0.00 0.00 0.00 3.49
1813 1851 9.700831 AATAAGTATTTTCTTCTGGGTGCTAAT 57.299 29.630 0.00 0.00 0.00 1.73
1814 1852 9.700831 ATAAGTATTTTCTTCTGGGTGCTAATT 57.299 29.630 0.00 0.00 0.00 1.40
1815 1853 8.422577 AAGTATTTTCTTCTGGGTGCTAATTT 57.577 30.769 0.00 0.00 0.00 1.82
1816 1854 7.830739 AGTATTTTCTTCTGGGTGCTAATTTG 58.169 34.615 0.00 0.00 0.00 2.32
1817 1855 6.670695 ATTTTCTTCTGGGTGCTAATTTGT 57.329 33.333 0.00 0.00 0.00 2.83
1818 1856 6.478512 TTTTCTTCTGGGTGCTAATTTGTT 57.521 33.333 0.00 0.00 0.00 2.83
1819 1857 5.452078 TTCTTCTGGGTGCTAATTTGTTG 57.548 39.130 0.00 0.00 0.00 3.33
1820 1858 4.469657 TCTTCTGGGTGCTAATTTGTTGT 58.530 39.130 0.00 0.00 0.00 3.32
1821 1859 4.518970 TCTTCTGGGTGCTAATTTGTTGTC 59.481 41.667 0.00 0.00 0.00 3.18
1822 1860 2.811431 TCTGGGTGCTAATTTGTTGTCG 59.189 45.455 0.00 0.00 0.00 4.35
1823 1861 1.268352 TGGGTGCTAATTTGTTGTCGC 59.732 47.619 0.00 0.00 0.00 5.19
1824 1862 1.539827 GGGTGCTAATTTGTTGTCGCT 59.460 47.619 0.00 0.00 0.00 4.93
1825 1863 2.584791 GGTGCTAATTTGTTGTCGCTG 58.415 47.619 0.00 0.00 0.00 5.18
1826 1864 2.584791 GTGCTAATTTGTTGTCGCTGG 58.415 47.619 0.00 0.00 0.00 4.85
1827 1865 2.031157 GTGCTAATTTGTTGTCGCTGGT 60.031 45.455 0.00 0.00 0.00 4.00
1828 1866 2.621055 TGCTAATTTGTTGTCGCTGGTT 59.379 40.909 0.00 0.00 0.00 3.67
1829 1867 3.815962 TGCTAATTTGTTGTCGCTGGTTA 59.184 39.130 0.00 0.00 0.00 2.85
1830 1868 4.156182 GCTAATTTGTTGTCGCTGGTTAC 58.844 43.478 0.00 0.00 0.00 2.50
1831 1869 4.319911 GCTAATTTGTTGTCGCTGGTTACA 60.320 41.667 0.00 0.00 0.00 2.41
1832 1870 3.619233 ATTTGTTGTCGCTGGTTACAC 57.381 42.857 0.00 0.00 0.00 2.90
1833 1871 2.025589 TTGTTGTCGCTGGTTACACA 57.974 45.000 0.00 0.00 0.00 3.72
1834 1872 2.248280 TGTTGTCGCTGGTTACACAT 57.752 45.000 0.00 0.00 0.00 3.21
1835 1873 2.139917 TGTTGTCGCTGGTTACACATC 58.860 47.619 0.00 0.00 0.00 3.06
1836 1874 2.139917 GTTGTCGCTGGTTACACATCA 58.860 47.619 0.00 0.00 0.00 3.07
1837 1875 2.742053 GTTGTCGCTGGTTACACATCAT 59.258 45.455 0.00 0.00 0.00 2.45
1838 1876 3.052455 TGTCGCTGGTTACACATCATT 57.948 42.857 0.00 0.00 0.00 2.57
1839 1877 4.195225 TGTCGCTGGTTACACATCATTA 57.805 40.909 0.00 0.00 0.00 1.90
1840 1878 4.765273 TGTCGCTGGTTACACATCATTAT 58.235 39.130 0.00 0.00 0.00 1.28
1841 1879 5.182487 TGTCGCTGGTTACACATCATTATT 58.818 37.500 0.00 0.00 0.00 1.40
1842 1880 5.293324 TGTCGCTGGTTACACATCATTATTC 59.707 40.000 0.00 0.00 0.00 1.75
1843 1881 5.293324 GTCGCTGGTTACACATCATTATTCA 59.707 40.000 0.00 0.00 0.00 2.57
1844 1882 5.877564 TCGCTGGTTACACATCATTATTCAA 59.122 36.000 0.00 0.00 0.00 2.69
1845 1883 6.542005 TCGCTGGTTACACATCATTATTCAAT 59.458 34.615 0.00 0.00 0.00 2.57
1846 1884 7.066887 TCGCTGGTTACACATCATTATTCAATT 59.933 33.333 0.00 0.00 0.00 2.32
1847 1885 8.341903 CGCTGGTTACACATCATTATTCAATTA 58.658 33.333 0.00 0.00 0.00 1.40
1848 1886 9.669353 GCTGGTTACACATCATTATTCAATTAG 57.331 33.333 0.00 0.00 0.00 1.73
1850 1888 9.693739 TGGTTACACATCATTATTCAATTAGGT 57.306 29.630 0.00 0.00 0.00 3.08
1851 1889 9.950680 GGTTACACATCATTATTCAATTAGGTG 57.049 33.333 0.00 0.00 36.56 4.00
1855 1893 9.679661 ACACATCATTATTCAATTAGGTGTACA 57.320 29.630 0.00 0.00 39.93 2.90
1865 1903 8.642935 TTCAATTAGGTGTACATTTGAATCCA 57.357 30.769 0.00 0.00 30.52 3.41
1866 1904 8.821686 TCAATTAGGTGTACATTTGAATCCAT 57.178 30.769 0.00 0.00 0.00 3.41
1867 1905 9.253832 TCAATTAGGTGTACATTTGAATCCATT 57.746 29.630 0.00 0.00 0.00 3.16
1868 1906 9.874205 CAATTAGGTGTACATTTGAATCCATTT 57.126 29.630 0.00 0.00 0.00 2.32
1873 1911 9.479549 AGGTGTACATTTGAATCCATTTTATCT 57.520 29.630 0.00 0.00 0.00 1.98
1969 2007 9.937175 AGATTAAAAAGAAATTCTATACGCAGC 57.063 29.630 0.00 0.00 0.00 5.25
1970 2008 9.716507 GATTAAAAAGAAATTCTATACGCAGCA 57.283 29.630 0.00 0.00 0.00 4.41
1972 2010 7.975866 AAAAAGAAATTCTATACGCAGCATG 57.024 32.000 0.00 0.00 40.87 4.06
1983 2021 2.407616 CAGCATGCGTGATGGCTG 59.592 61.111 16.44 8.85 38.07 4.85
1984 2022 2.045634 AGCATGCGTGATGGCTGT 60.046 55.556 13.01 0.00 31.99 4.40
1985 2023 1.676635 AGCATGCGTGATGGCTGTT 60.677 52.632 13.01 0.00 31.99 3.16
1986 2024 1.213537 GCATGCGTGATGGCTGTTT 59.786 52.632 10.93 0.00 31.99 2.83
1987 2025 0.451383 GCATGCGTGATGGCTGTTTA 59.549 50.000 10.93 0.00 31.99 2.01
1988 2026 1.066002 GCATGCGTGATGGCTGTTTAT 59.934 47.619 10.93 0.00 31.99 1.40
1989 2027 2.723209 CATGCGTGATGGCTGTTTATG 58.277 47.619 0.00 0.00 0.00 1.90
1990 2028 0.451383 TGCGTGATGGCTGTTTATGC 59.549 50.000 0.00 0.00 0.00 3.14
1991 2029 0.451383 GCGTGATGGCTGTTTATGCA 59.549 50.000 0.00 0.00 0.00 3.96
1992 2030 1.135431 GCGTGATGGCTGTTTATGCAA 60.135 47.619 0.00 0.00 0.00 4.08
1993 2031 2.480073 GCGTGATGGCTGTTTATGCAAT 60.480 45.455 0.00 0.00 0.00 3.56
1994 2032 3.243035 GCGTGATGGCTGTTTATGCAATA 60.243 43.478 0.00 0.00 0.00 1.90
1995 2033 4.733230 GCGTGATGGCTGTTTATGCAATAA 60.733 41.667 0.00 0.00 36.92 1.40
1996 2034 5.339177 CGTGATGGCTGTTTATGCAATAAA 58.661 37.500 0.00 0.00 45.86 1.40
2011 2049 7.795482 ATGCAATAAAAATGAACCATGATGG 57.205 32.000 10.53 10.53 45.02 3.51
2012 2050 5.585445 TGCAATAAAAATGAACCATGATGGC 59.415 36.000 12.25 0.00 42.67 4.40
2013 2051 5.818857 GCAATAAAAATGAACCATGATGGCT 59.181 36.000 12.25 0.00 42.67 4.75
2014 2052 6.316890 GCAATAAAAATGAACCATGATGGCTT 59.683 34.615 12.25 5.19 42.67 4.35
2015 2053 7.466320 GCAATAAAAATGAACCATGATGGCTTC 60.466 37.037 12.25 14.25 42.67 3.86
2016 2054 5.750352 AAAAATGAACCATGATGGCTTCT 57.250 34.783 12.25 3.01 42.67 2.85
2017 2055 4.996788 AAATGAACCATGATGGCTTCTC 57.003 40.909 12.25 4.06 42.67 2.87
2018 2056 3.947612 ATGAACCATGATGGCTTCTCT 57.052 42.857 12.25 4.50 42.67 3.10
2019 2057 3.726557 TGAACCATGATGGCTTCTCTT 57.273 42.857 12.25 0.00 42.67 2.85
2020 2058 3.349927 TGAACCATGATGGCTTCTCTTG 58.650 45.455 12.25 0.00 42.67 3.02
2021 2059 2.431954 ACCATGATGGCTTCTCTTGG 57.568 50.000 12.25 12.60 42.67 3.61
2022 2060 1.637553 ACCATGATGGCTTCTCTTGGT 59.362 47.619 12.25 13.50 42.67 3.67
2023 2061 2.042162 ACCATGATGGCTTCTCTTGGTT 59.958 45.455 12.25 0.00 44.39 3.67
2024 2062 2.426024 CCATGATGGCTTCTCTTGGTTG 59.574 50.000 0.00 0.00 34.72 3.77
2025 2063 2.957402 TGATGGCTTCTCTTGGTTGT 57.043 45.000 1.86 0.00 0.00 3.32
2026 2064 3.228188 TGATGGCTTCTCTTGGTTGTT 57.772 42.857 1.86 0.00 0.00 2.83
2027 2065 3.149196 TGATGGCTTCTCTTGGTTGTTC 58.851 45.455 1.86 0.00 0.00 3.18
2028 2066 2.727123 TGGCTTCTCTTGGTTGTTCA 57.273 45.000 0.00 0.00 0.00 3.18
2029 2067 2.297701 TGGCTTCTCTTGGTTGTTCAC 58.702 47.619 0.00 0.00 0.00 3.18
2030 2068 2.297701 GGCTTCTCTTGGTTGTTCACA 58.702 47.619 0.00 0.00 0.00 3.58
2031 2069 2.687935 GGCTTCTCTTGGTTGTTCACAA 59.312 45.455 0.00 0.00 0.00 3.33
2048 2086 9.743057 TTGTTCACAACAATACTATTTTTGGAG 57.257 29.630 10.89 5.07 45.79 3.86
2049 2087 7.865385 TGTTCACAACAATACTATTTTTGGAGC 59.135 33.333 10.89 8.28 38.72 4.70
2050 2088 6.919721 TCACAACAATACTATTTTTGGAGCC 58.080 36.000 10.89 0.00 0.00 4.70
2051 2089 6.491745 TCACAACAATACTATTTTTGGAGCCA 59.508 34.615 10.89 0.00 0.00 4.75
2052 2090 7.014711 TCACAACAATACTATTTTTGGAGCCAA 59.985 33.333 10.89 0.00 0.00 4.52
2053 2091 7.116233 CACAACAATACTATTTTTGGAGCCAAC 59.884 37.037 0.50 0.00 35.46 3.77
2054 2092 7.015195 ACAACAATACTATTTTTGGAGCCAACT 59.985 33.333 0.50 0.00 35.46 3.16
2055 2093 7.158099 ACAATACTATTTTTGGAGCCAACTC 57.842 36.000 0.50 0.00 42.66 3.01
2056 2094 6.719370 ACAATACTATTTTTGGAGCCAACTCA 59.281 34.615 0.50 0.00 45.42 3.41
2057 2095 6.759497 ATACTATTTTTGGAGCCAACTCAC 57.241 37.500 0.50 0.00 45.42 3.51
2058 2096 4.469657 ACTATTTTTGGAGCCAACTCACA 58.530 39.130 0.50 0.00 45.42 3.58
2059 2097 4.892934 ACTATTTTTGGAGCCAACTCACAA 59.107 37.500 0.50 0.00 45.42 3.33
2060 2098 3.799281 TTTTTGGAGCCAACTCACAAG 57.201 42.857 0.50 0.00 45.42 3.16
2061 2099 2.727123 TTTGGAGCCAACTCACAAGA 57.273 45.000 0.50 0.00 45.42 3.02
2062 2100 2.727123 TTGGAGCCAACTCACAAGAA 57.273 45.000 0.00 0.00 45.42 2.52
2063 2101 1.967319 TGGAGCCAACTCACAAGAAC 58.033 50.000 0.00 0.00 45.42 3.01
2064 2102 1.239347 GGAGCCAACTCACAAGAACC 58.761 55.000 0.00 0.00 45.42 3.62
2065 2103 1.476833 GGAGCCAACTCACAAGAACCA 60.477 52.381 0.00 0.00 45.42 3.67
2066 2104 1.876156 GAGCCAACTCACAAGAACCAG 59.124 52.381 0.00 0.00 42.93 4.00
2067 2105 0.954452 GCCAACTCACAAGAACCAGG 59.046 55.000 0.00 0.00 0.00 4.45
2068 2106 1.476833 GCCAACTCACAAGAACCAGGA 60.477 52.381 0.00 0.00 0.00 3.86
2069 2107 2.930950 CCAACTCACAAGAACCAGGAA 58.069 47.619 0.00 0.00 0.00 3.36
2070 2108 2.880890 CCAACTCACAAGAACCAGGAAG 59.119 50.000 0.00 0.00 0.00 3.46
2071 2109 2.262423 ACTCACAAGAACCAGGAAGC 57.738 50.000 0.00 0.00 0.00 3.86
2072 2110 1.490490 ACTCACAAGAACCAGGAAGCA 59.510 47.619 0.00 0.00 0.00 3.91
2073 2111 2.092429 ACTCACAAGAACCAGGAAGCAA 60.092 45.455 0.00 0.00 0.00 3.91
2074 2112 2.951642 CTCACAAGAACCAGGAAGCAAA 59.048 45.455 0.00 0.00 0.00 3.68
2075 2113 3.360867 TCACAAGAACCAGGAAGCAAAA 58.639 40.909 0.00 0.00 0.00 2.44
2076 2114 3.960102 TCACAAGAACCAGGAAGCAAAAT 59.040 39.130 0.00 0.00 0.00 1.82
2077 2115 4.037923 TCACAAGAACCAGGAAGCAAAATC 59.962 41.667 0.00 0.00 0.00 2.17
2078 2116 3.960102 ACAAGAACCAGGAAGCAAAATCA 59.040 39.130 0.00 0.00 0.00 2.57
2079 2117 4.405358 ACAAGAACCAGGAAGCAAAATCAA 59.595 37.500 0.00 0.00 0.00 2.57
2080 2118 5.104982 ACAAGAACCAGGAAGCAAAATCAAA 60.105 36.000 0.00 0.00 0.00 2.69
2081 2119 4.948847 AGAACCAGGAAGCAAAATCAAAC 58.051 39.130 0.00 0.00 0.00 2.93
2082 2120 4.405358 AGAACCAGGAAGCAAAATCAAACA 59.595 37.500 0.00 0.00 0.00 2.83
2083 2121 4.751767 ACCAGGAAGCAAAATCAAACAA 57.248 36.364 0.00 0.00 0.00 2.83
2084 2122 5.294734 ACCAGGAAGCAAAATCAAACAAT 57.705 34.783 0.00 0.00 0.00 2.71
2085 2123 5.299949 ACCAGGAAGCAAAATCAAACAATC 58.700 37.500 0.00 0.00 0.00 2.67
2086 2124 5.163322 ACCAGGAAGCAAAATCAAACAATCA 60.163 36.000 0.00 0.00 0.00 2.57
2087 2125 5.759273 CCAGGAAGCAAAATCAAACAATCAA 59.241 36.000 0.00 0.00 0.00 2.57
2088 2126 6.260493 CCAGGAAGCAAAATCAAACAATCAAA 59.740 34.615 0.00 0.00 0.00 2.69
2089 2127 7.349711 CAGGAAGCAAAATCAAACAATCAAAG 58.650 34.615 0.00 0.00 0.00 2.77
2090 2128 6.017687 AGGAAGCAAAATCAAACAATCAAAGC 60.018 34.615 0.00 0.00 0.00 3.51
2091 2129 6.017687 GGAAGCAAAATCAAACAATCAAAGCT 60.018 34.615 0.00 0.00 0.00 3.74
2092 2130 6.535274 AGCAAAATCAAACAATCAAAGCTC 57.465 33.333 0.00 0.00 0.00 4.09
2093 2131 5.467735 AGCAAAATCAAACAATCAAAGCTCC 59.532 36.000 0.00 0.00 0.00 4.70
2094 2132 5.467735 GCAAAATCAAACAATCAAAGCTCCT 59.532 36.000 0.00 0.00 0.00 3.69
2095 2133 6.017687 GCAAAATCAAACAATCAAAGCTCCTT 60.018 34.615 0.00 0.00 0.00 3.36
2096 2134 7.349711 CAAAATCAAACAATCAAAGCTCCTTG 58.650 34.615 0.00 0.00 0.00 3.61
2097 2135 5.796424 ATCAAACAATCAAAGCTCCTTGT 57.204 34.783 0.00 0.00 33.45 3.16
2098 2136 5.596836 TCAAACAATCAAAGCTCCTTGTT 57.403 34.783 9.01 9.01 42.05 2.83
2099 2137 5.976458 TCAAACAATCAAAGCTCCTTGTTT 58.024 33.333 16.50 16.50 46.90 2.83
2100 2138 7.106439 TCAAACAATCAAAGCTCCTTGTTTA 57.894 32.000 19.46 11.11 45.21 2.01
2101 2139 7.202526 TCAAACAATCAAAGCTCCTTGTTTAG 58.797 34.615 19.46 15.68 45.21 1.85
2102 2140 5.712152 ACAATCAAAGCTCCTTGTTTAGG 57.288 39.130 0.00 0.00 46.27 2.69
2103 2141 4.021981 ACAATCAAAGCTCCTTGTTTAGGC 60.022 41.667 0.00 0.00 44.37 3.93
2104 2142 3.508845 TCAAAGCTCCTTGTTTAGGCT 57.491 42.857 0.00 0.00 44.37 4.58
2105 2143 4.634012 TCAAAGCTCCTTGTTTAGGCTA 57.366 40.909 0.00 0.00 44.37 3.93
2106 2144 5.179452 TCAAAGCTCCTTGTTTAGGCTAT 57.821 39.130 0.00 0.00 44.37 2.97
2107 2145 4.943705 TCAAAGCTCCTTGTTTAGGCTATG 59.056 41.667 0.00 0.00 44.37 2.23
2108 2146 4.576330 AAGCTCCTTGTTTAGGCTATGT 57.424 40.909 0.00 0.00 44.37 2.29
2109 2147 5.693769 AAGCTCCTTGTTTAGGCTATGTA 57.306 39.130 0.00 0.00 44.37 2.29
2110 2148 5.896073 AGCTCCTTGTTTAGGCTATGTAT 57.104 39.130 0.00 0.00 44.37 2.29
2111 2149 6.253946 AGCTCCTTGTTTAGGCTATGTATT 57.746 37.500 0.00 0.00 44.37 1.89
2112 2150 6.058183 AGCTCCTTGTTTAGGCTATGTATTG 58.942 40.000 0.00 0.00 44.37 1.90
2113 2151 5.823045 GCTCCTTGTTTAGGCTATGTATTGT 59.177 40.000 0.00 0.00 44.37 2.71
2114 2152 6.318900 GCTCCTTGTTTAGGCTATGTATTGTT 59.681 38.462 0.00 0.00 44.37 2.83
2115 2153 7.148069 GCTCCTTGTTTAGGCTATGTATTGTTT 60.148 37.037 0.00 0.00 44.37 2.83
2116 2154 8.644374 TCCTTGTTTAGGCTATGTATTGTTTT 57.356 30.769 0.00 0.00 44.37 2.43
2117 2155 9.084533 TCCTTGTTTAGGCTATGTATTGTTTTT 57.915 29.630 0.00 0.00 44.37 1.94
2136 2174 4.693538 TTTTTGAAACAAGGCAAAAGGC 57.306 36.364 0.00 0.00 42.71 4.35
2137 2175 3.625649 TTTGAAACAAGGCAAAAGGCT 57.374 38.095 0.00 0.00 44.01 4.58
2138 2176 3.625649 TTGAAACAAGGCAAAAGGCTT 57.374 38.095 0.00 0.00 44.01 4.35
2139 2177 2.903798 TGAAACAAGGCAAAAGGCTTG 58.096 42.857 24.38 24.38 44.01 4.01
2140 2178 1.599071 GAAACAAGGCAAAAGGCTTGC 59.401 47.619 25.46 0.50 44.01 4.01
2147 2185 2.975410 GCAAAAGGCTTGCCATTTTC 57.025 45.000 14.54 5.39 39.38 2.29
2148 2186 2.220313 GCAAAAGGCTTGCCATTTTCA 58.780 42.857 14.54 0.00 39.38 2.69
2149 2187 2.815503 GCAAAAGGCTTGCCATTTTCAT 59.184 40.909 14.54 0.00 39.38 2.57
2150 2188 3.253921 GCAAAAGGCTTGCCATTTTCATT 59.746 39.130 14.54 0.00 39.38 2.57
2151 2189 4.455190 GCAAAAGGCTTGCCATTTTCATTA 59.545 37.500 14.54 0.00 39.38 1.90
2152 2190 5.048852 GCAAAAGGCTTGCCATTTTCATTAA 60.049 36.000 14.54 0.00 39.38 1.40
2153 2191 6.349528 GCAAAAGGCTTGCCATTTTCATTAAT 60.350 34.615 14.54 0.00 39.38 1.40
2154 2192 7.148272 GCAAAAGGCTTGCCATTTTCATTAATA 60.148 33.333 14.54 0.00 39.38 0.98
2155 2193 8.728833 CAAAAGGCTTGCCATTTTCATTAATAA 58.271 29.630 14.54 0.00 0.00 1.40
2156 2194 8.860780 AAAGGCTTGCCATTTTCATTAATAAA 57.139 26.923 14.54 0.00 0.00 1.40
2157 2195 8.496707 AAGGCTTGCCATTTTCATTAATAAAG 57.503 30.769 14.54 0.00 0.00 1.85
2158 2196 7.850193 AGGCTTGCCATTTTCATTAATAAAGA 58.150 30.769 14.54 0.00 0.00 2.52
2159 2197 7.983484 AGGCTTGCCATTTTCATTAATAAAGAG 59.017 33.333 14.54 0.00 0.00 2.85
2160 2198 7.225341 GGCTTGCCATTTTCATTAATAAAGAGG 59.775 37.037 6.79 0.00 0.00 3.69
2161 2199 7.981225 GCTTGCCATTTTCATTAATAAAGAGGA 59.019 33.333 8.23 0.00 0.00 3.71
2162 2200 9.525409 CTTGCCATTTTCATTAATAAAGAGGAG 57.475 33.333 8.23 0.00 0.00 3.69
2163 2201 8.010733 TGCCATTTTCATTAATAAAGAGGAGG 57.989 34.615 8.23 0.00 0.00 4.30
2164 2202 7.069826 TGCCATTTTCATTAATAAAGAGGAGGG 59.930 37.037 8.23 0.00 0.00 4.30
2165 2203 7.069950 GCCATTTTCATTAATAAAGAGGAGGGT 59.930 37.037 8.23 0.00 0.00 4.34
2166 2204 8.981659 CCATTTTCATTAATAAAGAGGAGGGTT 58.018 33.333 0.00 0.00 0.00 4.11
2172 2210 9.901172 TCATTAATAAAGAGGAGGGTTTAAGAC 57.099 33.333 0.00 0.00 0.00 3.01
2173 2211 9.681062 CATTAATAAAGAGGAGGGTTTAAGACA 57.319 33.333 0.00 0.00 0.00 3.41
2175 2213 9.734984 TTAATAAAGAGGAGGGTTTAAGACAAG 57.265 33.333 0.00 0.00 0.00 3.16
2176 2214 4.642466 AAGAGGAGGGTTTAAGACAAGG 57.358 45.455 0.00 0.00 0.00 3.61
2177 2215 3.870559 AGAGGAGGGTTTAAGACAAGGA 58.129 45.455 0.00 0.00 0.00 3.36
2178 2216 4.439860 AGAGGAGGGTTTAAGACAAGGAT 58.560 43.478 0.00 0.00 0.00 3.24
2179 2217 4.471747 AGAGGAGGGTTTAAGACAAGGATC 59.528 45.833 0.00 0.00 0.00 3.36
2180 2218 3.523972 AGGAGGGTTTAAGACAAGGATCC 59.476 47.826 2.48 2.48 0.00 3.36
2181 2219 3.532542 GAGGGTTTAAGACAAGGATCCG 58.467 50.000 5.98 0.00 0.00 4.18
2182 2220 2.910977 AGGGTTTAAGACAAGGATCCGT 59.089 45.455 5.98 0.00 0.00 4.69
2183 2221 4.098894 AGGGTTTAAGACAAGGATCCGTA 58.901 43.478 5.98 0.00 0.00 4.02
2184 2222 4.161754 AGGGTTTAAGACAAGGATCCGTAG 59.838 45.833 5.98 2.71 0.00 3.51
2185 2223 4.161001 GGGTTTAAGACAAGGATCCGTAGA 59.839 45.833 5.98 0.00 0.00 2.59
2186 2224 5.107824 GGTTTAAGACAAGGATCCGTAGAC 58.892 45.833 5.98 0.92 0.00 2.59
2187 2225 5.337009 GGTTTAAGACAAGGATCCGTAGACA 60.337 44.000 5.98 0.00 0.00 3.41
2188 2226 5.578005 TTAAGACAAGGATCCGTAGACAG 57.422 43.478 5.98 0.00 0.00 3.51
2189 2227 2.379972 AGACAAGGATCCGTAGACAGG 58.620 52.381 5.98 0.00 0.00 4.00
2190 2228 1.409427 GACAAGGATCCGTAGACAGGG 59.591 57.143 5.98 0.00 0.00 4.45
2191 2229 1.273098 ACAAGGATCCGTAGACAGGGT 60.273 52.381 5.98 0.00 0.00 4.34
2192 2230 2.024655 ACAAGGATCCGTAGACAGGGTA 60.025 50.000 5.98 0.00 0.00 3.69
2193 2231 3.028850 CAAGGATCCGTAGACAGGGTAA 58.971 50.000 5.98 0.00 0.00 2.85
2194 2232 3.393426 AGGATCCGTAGACAGGGTAAA 57.607 47.619 5.98 0.00 0.00 2.01
2195 2233 3.716431 AGGATCCGTAGACAGGGTAAAA 58.284 45.455 5.98 0.00 0.00 1.52
2196 2234 4.098894 AGGATCCGTAGACAGGGTAAAAA 58.901 43.478 5.98 0.00 0.00 1.94
2214 2252 1.714794 AAAAGTCCATCACTCTCGCG 58.285 50.000 0.00 0.00 32.30 5.87
2215 2253 0.888619 AAAGTCCATCACTCTCGCGA 59.111 50.000 9.26 9.26 32.30 5.87
2216 2254 0.171455 AAGTCCATCACTCTCGCGAC 59.829 55.000 3.71 0.00 32.30 5.19
2217 2255 0.960861 AGTCCATCACTCTCGCGACA 60.961 55.000 3.71 0.00 0.00 4.35
2218 2256 0.101399 GTCCATCACTCTCGCGACAT 59.899 55.000 3.71 0.00 0.00 3.06
2219 2257 0.817654 TCCATCACTCTCGCGACATT 59.182 50.000 3.71 0.00 0.00 2.71
2220 2258 2.021457 TCCATCACTCTCGCGACATTA 58.979 47.619 3.71 0.00 0.00 1.90
2221 2259 2.120232 CCATCACTCTCGCGACATTAC 58.880 52.381 3.71 0.00 0.00 1.89
2222 2260 2.479560 CCATCACTCTCGCGACATTACA 60.480 50.000 3.71 0.00 0.00 2.41
2223 2261 3.179048 CATCACTCTCGCGACATTACAA 58.821 45.455 3.71 0.00 0.00 2.41
2224 2262 2.592194 TCACTCTCGCGACATTACAAC 58.408 47.619 3.71 0.00 0.00 3.32
2225 2263 2.030628 TCACTCTCGCGACATTACAACA 60.031 45.455 3.71 0.00 0.00 3.33
2226 2264 2.090658 CACTCTCGCGACATTACAACAC 59.909 50.000 3.71 0.00 0.00 3.32
2227 2265 1.654105 CTCTCGCGACATTACAACACC 59.346 52.381 3.71 0.00 0.00 4.16
2228 2266 0.719465 CTCGCGACATTACAACACCC 59.281 55.000 3.71 0.00 0.00 4.61
2229 2267 0.033642 TCGCGACATTACAACACCCA 59.966 50.000 3.71 0.00 0.00 4.51
2230 2268 0.869068 CGCGACATTACAACACCCAA 59.131 50.000 0.00 0.00 0.00 4.12
2231 2269 1.136085 CGCGACATTACAACACCCAAG 60.136 52.381 0.00 0.00 0.00 3.61
2232 2270 1.877443 GCGACATTACAACACCCAAGT 59.123 47.619 0.00 0.00 0.00 3.16
2233 2271 2.292292 GCGACATTACAACACCCAAGTT 59.708 45.455 0.00 0.00 0.00 2.66
2234 2272 3.243267 GCGACATTACAACACCCAAGTTT 60.243 43.478 0.00 0.00 0.00 2.66
2235 2273 4.735283 GCGACATTACAACACCCAAGTTTT 60.735 41.667 0.00 0.00 0.00 2.43
2236 2274 5.344884 CGACATTACAACACCCAAGTTTTT 58.655 37.500 0.00 0.00 0.00 1.94
2237 2275 5.457473 CGACATTACAACACCCAAGTTTTTC 59.543 40.000 0.00 0.00 0.00 2.29
2238 2276 5.344884 ACATTACAACACCCAAGTTTTTCG 58.655 37.500 0.00 0.00 0.00 3.46
2239 2277 2.287393 ACAACACCCAAGTTTTTCGC 57.713 45.000 0.00 0.00 0.00 4.70
2240 2278 1.822371 ACAACACCCAAGTTTTTCGCT 59.178 42.857 0.00 0.00 0.00 4.93
2241 2279 2.159296 ACAACACCCAAGTTTTTCGCTC 60.159 45.455 0.00 0.00 0.00 5.03
2242 2280 1.029681 ACACCCAAGTTTTTCGCTCC 58.970 50.000 0.00 0.00 0.00 4.70
2243 2281 0.313987 CACCCAAGTTTTTCGCTCCC 59.686 55.000 0.00 0.00 0.00 4.30
2244 2282 1.170290 ACCCAAGTTTTTCGCTCCCG 61.170 55.000 0.00 0.00 0.00 5.14
2245 2283 1.081442 CCAAGTTTTTCGCTCCCGC 60.081 57.895 0.00 0.00 0.00 6.13
2246 2284 1.081442 CAAGTTTTTCGCTCCCGCC 60.081 57.895 0.00 0.00 0.00 6.13
2247 2285 1.527380 AAGTTTTTCGCTCCCGCCA 60.527 52.632 0.00 0.00 0.00 5.69
2248 2286 0.893727 AAGTTTTTCGCTCCCGCCAT 60.894 50.000 0.00 0.00 0.00 4.40
2249 2287 1.136774 GTTTTTCGCTCCCGCCATC 59.863 57.895 0.00 0.00 0.00 3.51
2250 2288 1.302913 TTTTTCGCTCCCGCCATCA 60.303 52.632 0.00 0.00 0.00 3.07
2251 2289 1.582610 TTTTTCGCTCCCGCCATCAC 61.583 55.000 0.00 0.00 0.00 3.06
2252 2290 3.969250 TTTCGCTCCCGCCATCACC 62.969 63.158 0.00 0.00 0.00 4.02
2256 2294 3.151710 CTCCCGCCATCACCCGTA 61.152 66.667 0.00 0.00 0.00 4.02
2257 2295 2.684294 TCCCGCCATCACCCGTAA 60.684 61.111 0.00 0.00 0.00 3.18
2258 2296 2.040009 CTCCCGCCATCACCCGTAAT 62.040 60.000 0.00 0.00 0.00 1.89
2259 2297 1.597027 CCCGCCATCACCCGTAATC 60.597 63.158 0.00 0.00 0.00 1.75
2260 2298 1.445942 CCGCCATCACCCGTAATCT 59.554 57.895 0.00 0.00 0.00 2.40
2261 2299 0.677288 CCGCCATCACCCGTAATCTA 59.323 55.000 0.00 0.00 0.00 1.98
2262 2300 1.069513 CCGCCATCACCCGTAATCTAA 59.930 52.381 0.00 0.00 0.00 2.10
2263 2301 2.132762 CGCCATCACCCGTAATCTAAC 58.867 52.381 0.00 0.00 0.00 2.34
2264 2302 2.223971 CGCCATCACCCGTAATCTAACT 60.224 50.000 0.00 0.00 0.00 2.24
2265 2303 3.740141 CGCCATCACCCGTAATCTAACTT 60.740 47.826 0.00 0.00 0.00 2.66
2266 2304 4.196971 GCCATCACCCGTAATCTAACTTT 58.803 43.478 0.00 0.00 0.00 2.66
2267 2305 4.035208 GCCATCACCCGTAATCTAACTTTG 59.965 45.833 0.00 0.00 0.00 2.77
2268 2306 5.183228 CCATCACCCGTAATCTAACTTTGT 58.817 41.667 0.00 0.00 0.00 2.83
2269 2307 5.293569 CCATCACCCGTAATCTAACTTTGTC 59.706 44.000 0.00 0.00 0.00 3.18
2270 2308 4.824289 TCACCCGTAATCTAACTTTGTCC 58.176 43.478 0.00 0.00 0.00 4.02
2271 2309 4.529377 TCACCCGTAATCTAACTTTGTCCT 59.471 41.667 0.00 0.00 0.00 3.85
2272 2310 5.012354 TCACCCGTAATCTAACTTTGTCCTT 59.988 40.000 0.00 0.00 0.00 3.36
2273 2311 6.211184 TCACCCGTAATCTAACTTTGTCCTTA 59.789 38.462 0.00 0.00 0.00 2.69
2274 2312 6.875195 CACCCGTAATCTAACTTTGTCCTTAA 59.125 38.462 0.00 0.00 0.00 1.85
2275 2313 7.551617 CACCCGTAATCTAACTTTGTCCTTAAT 59.448 37.037 0.00 0.00 0.00 1.40
2276 2314 7.551617 ACCCGTAATCTAACTTTGTCCTTAATG 59.448 37.037 0.00 0.00 0.00 1.90
2277 2315 7.551617 CCCGTAATCTAACTTTGTCCTTAATGT 59.448 37.037 0.00 0.00 0.00 2.71
2278 2316 8.943002 CCGTAATCTAACTTTGTCCTTAATGTT 58.057 33.333 0.00 0.00 33.93 2.71
2282 2320 6.894828 TCTAACTTTGTCCTTAATGTTTCGC 58.105 36.000 0.00 0.00 32.39 4.70
2283 2321 5.508200 AACTTTGTCCTTAATGTTTCGCA 57.492 34.783 0.00 0.00 0.00 5.10
2284 2322 4.855531 ACTTTGTCCTTAATGTTTCGCAC 58.144 39.130 0.00 0.00 0.00 5.34
2285 2323 4.578928 ACTTTGTCCTTAATGTTTCGCACT 59.421 37.500 0.00 0.00 0.00 4.40
2286 2324 5.761234 ACTTTGTCCTTAATGTTTCGCACTA 59.239 36.000 0.00 0.00 0.00 2.74
2287 2325 5.856126 TTGTCCTTAATGTTTCGCACTAG 57.144 39.130 0.00 0.00 0.00 2.57
2288 2326 3.682858 TGTCCTTAATGTTTCGCACTAGC 59.317 43.478 0.00 0.00 37.42 3.42
2289 2327 3.682858 GTCCTTAATGTTTCGCACTAGCA 59.317 43.478 0.00 0.00 42.27 3.49
2290 2328 3.682858 TCCTTAATGTTTCGCACTAGCAC 59.317 43.478 0.00 0.00 42.27 4.40
2291 2329 3.181510 CCTTAATGTTTCGCACTAGCACC 60.182 47.826 0.00 0.00 42.27 5.01
2292 2330 0.796312 AATGTTTCGCACTAGCACCG 59.204 50.000 0.00 0.00 42.27 4.94
2293 2331 0.320421 ATGTTTCGCACTAGCACCGT 60.320 50.000 0.00 0.00 42.27 4.83
2294 2332 1.218875 TGTTTCGCACTAGCACCGTG 61.219 55.000 0.00 0.00 42.27 4.94
2295 2333 0.942410 GTTTCGCACTAGCACCGTGA 60.942 55.000 1.65 0.00 42.27 4.35
2296 2334 0.037697 TTTCGCACTAGCACCGTGAT 60.038 50.000 1.65 0.00 42.27 3.06
2297 2335 0.735978 TTCGCACTAGCACCGTGATG 60.736 55.000 1.65 0.00 42.27 3.07
2298 2336 2.167219 CGCACTAGCACCGTGATGG 61.167 63.158 1.65 0.00 42.27 3.51
2299 2337 1.815421 GCACTAGCACCGTGATGGG 60.815 63.158 1.65 0.00 44.64 4.00
2301 2339 2.367202 ACTAGCACCGTGATGGGGG 61.367 63.158 1.65 0.00 43.68 5.40
2304 2342 3.061848 GCACCGTGATGGGGGTTG 61.062 66.667 1.65 0.00 43.68 3.77
2305 2343 3.061848 CACCGTGATGGGGGTTGC 61.062 66.667 0.00 0.00 44.64 4.17
2306 2344 4.360405 ACCGTGATGGGGGTTGCC 62.360 66.667 0.00 0.00 44.64 4.52
2308 2346 4.402528 CGTGATGGGGGTTGCCGA 62.403 66.667 0.00 0.00 0.00 5.54
2309 2347 2.438434 GTGATGGGGGTTGCCGAG 60.438 66.667 0.00 0.00 0.00 4.63
2310 2348 2.933287 TGATGGGGGTTGCCGAGT 60.933 61.111 0.00 0.00 0.00 4.18
2311 2349 2.355115 GATGGGGGTTGCCGAGTT 59.645 61.111 0.00 0.00 0.00 3.01
2312 2350 2.035626 ATGGGGGTTGCCGAGTTG 59.964 61.111 0.00 0.00 0.00 3.16
2313 2351 4.966787 TGGGGGTTGCCGAGTTGC 62.967 66.667 0.00 0.00 0.00 4.17
2324 2362 3.022981 CGAGTTGCGGAAGACTCTC 57.977 57.895 7.11 1.76 40.03 3.20
2325 2363 0.794981 CGAGTTGCGGAAGACTCTCG 60.795 60.000 11.75 11.75 40.03 4.04
2331 2369 2.002127 CGGAAGACTCTCGCATTGC 58.998 57.895 0.00 0.00 0.00 3.56
2332 2370 0.737367 CGGAAGACTCTCGCATTGCA 60.737 55.000 9.69 0.00 0.00 4.08
2333 2371 0.723981 GGAAGACTCTCGCATTGCAC 59.276 55.000 9.69 0.00 0.00 4.57
2334 2372 1.674221 GGAAGACTCTCGCATTGCACT 60.674 52.381 9.69 0.00 0.00 4.40
2335 2373 1.658095 GAAGACTCTCGCATTGCACTC 59.342 52.381 9.69 0.00 0.00 3.51
2336 2374 0.108424 AGACTCTCGCATTGCACTCC 60.108 55.000 9.69 0.00 0.00 3.85
2337 2375 0.108424 GACTCTCGCATTGCACTCCT 60.108 55.000 9.69 0.00 0.00 3.69
2338 2376 0.322975 ACTCTCGCATTGCACTCCTT 59.677 50.000 9.69 0.00 0.00 3.36
2339 2377 1.005340 CTCTCGCATTGCACTCCTTC 58.995 55.000 9.69 0.00 0.00 3.46
2340 2378 0.391661 TCTCGCATTGCACTCCTTCC 60.392 55.000 9.69 0.00 0.00 3.46
2341 2379 0.674581 CTCGCATTGCACTCCTTCCA 60.675 55.000 9.69 0.00 0.00 3.53
2342 2380 0.250684 TCGCATTGCACTCCTTCCAA 60.251 50.000 9.69 0.00 0.00 3.53
2343 2381 0.597568 CGCATTGCACTCCTTCCAAA 59.402 50.000 9.69 0.00 0.00 3.28
2344 2382 1.203052 CGCATTGCACTCCTTCCAAAT 59.797 47.619 9.69 0.00 0.00 2.32
2345 2383 2.733227 CGCATTGCACTCCTTCCAAATC 60.733 50.000 9.69 0.00 0.00 2.17
2346 2384 2.494870 GCATTGCACTCCTTCCAAATCT 59.505 45.455 3.15 0.00 0.00 2.40
2347 2385 3.428589 GCATTGCACTCCTTCCAAATCTC 60.429 47.826 3.15 0.00 0.00 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 57 2.224967 ACTCCCTGAAGAAGCTGCATTT 60.225 45.455 1.02 0.00 0.00 2.32
69 72 0.106419 GGAGGATCAGACGACTCCCT 60.106 60.000 0.00 0.00 42.87 4.20
73 84 3.949113 GAGTTAAGGAGGATCAGACGACT 59.051 47.826 0.00 0.00 36.25 4.18
79 91 7.713073 GGTTAAAGATGAGTTAAGGAGGATCAG 59.287 40.741 0.00 0.00 36.25 2.90
248 261 2.112511 AGGCCTCCTTTTTCCTTGGAAT 59.887 45.455 0.00 0.00 0.00 3.01
633 650 2.657066 GGGGGTGGAGACGTCTTCC 61.657 68.421 21.25 20.88 0.00 3.46
653 670 3.838565 TCCCTCCATTGCTCTAGTAGAG 58.161 50.000 21.00 21.00 45.04 2.43
706 723 7.337689 CCAAACAACTTGATCAGGATCATTAGA 59.662 37.037 12.40 0.00 46.12 2.10
729 746 1.068943 TCTTACCACCCAAGGCCCAA 61.069 55.000 0.00 0.00 0.00 4.12
741 758 2.488347 GGTGAACTTGCCCTTCTTACCA 60.488 50.000 0.00 0.00 0.00 3.25
1012 1031 1.446016 GTTCCCAGCATACCCCCTAT 58.554 55.000 0.00 0.00 0.00 2.57
1018 1037 1.153229 GGTCCGTTCCCAGCATACC 60.153 63.158 0.00 0.00 0.00 2.73
1068 1087 3.048600 TGGAAGGAAGCTATAGCACCAT 58.951 45.455 29.39 22.83 45.16 3.55
1139 1158 4.454161 TGGTTCTGTTACGACAATTCCATG 59.546 41.667 0.00 0.00 34.85 3.66
1380 1417 1.372087 GACAGCAAATCCCAGGCGAG 61.372 60.000 0.00 0.00 0.00 5.03
1404 1441 3.188667 GCGAAACCAAAAGGACTAGGAAG 59.811 47.826 0.00 0.00 0.00 3.46
1410 1447 2.152016 GCTAGCGAAACCAAAAGGACT 58.848 47.619 0.00 0.00 0.00 3.85
1433 1470 4.215109 AGCCTAAAACCATTCACAACACT 58.785 39.130 0.00 0.00 0.00 3.55
1507 1544 5.772393 AAACCCAGTGACACCAGAATATA 57.228 39.130 0.84 0.00 0.00 0.86
1513 1550 1.318576 GGAAAACCCAGTGACACCAG 58.681 55.000 0.84 0.00 34.14 4.00
1656 1694 1.341080 AGCACAACCCCTTTCCATTG 58.659 50.000 0.00 0.00 0.00 2.82
1690 1728 2.433604 TGCATGGTTTCAGCCTTTCAAA 59.566 40.909 0.00 0.00 0.00 2.69
1691 1729 2.036217 CTGCATGGTTTCAGCCTTTCAA 59.964 45.455 0.00 0.00 0.00 2.69
1692 1730 1.614903 CTGCATGGTTTCAGCCTTTCA 59.385 47.619 0.00 0.00 0.00 2.69
1693 1731 2.358939 CTGCATGGTTTCAGCCTTTC 57.641 50.000 0.00 0.00 0.00 2.62
1699 1737 2.093890 TGGTATGCTGCATGGTTTCAG 58.906 47.619 24.59 0.00 0.00 3.02
1700 1738 2.212812 TGGTATGCTGCATGGTTTCA 57.787 45.000 24.59 11.99 0.00 2.69
1701 1739 3.806625 ATTGGTATGCTGCATGGTTTC 57.193 42.857 24.59 9.77 0.00 2.78
1702 1740 5.187576 ACTTTATTGGTATGCTGCATGGTTT 59.812 36.000 24.59 8.45 0.00 3.27
1703 1741 4.711355 ACTTTATTGGTATGCTGCATGGTT 59.289 37.500 24.59 1.70 0.00 3.67
1704 1742 4.280819 ACTTTATTGGTATGCTGCATGGT 58.719 39.130 24.59 2.10 0.00 3.55
1705 1743 4.924305 ACTTTATTGGTATGCTGCATGG 57.076 40.909 24.59 6.22 0.00 3.66
1706 1744 8.190122 TCTTTTACTTTATTGGTATGCTGCATG 58.810 33.333 24.59 7.28 0.00 4.06
1707 1745 8.292444 TCTTTTACTTTATTGGTATGCTGCAT 57.708 30.769 20.18 20.18 0.00 3.96
1708 1746 7.695480 TCTTTTACTTTATTGGTATGCTGCA 57.305 32.000 4.13 4.13 0.00 4.41
1709 1747 8.244113 AGTTCTTTTACTTTATTGGTATGCTGC 58.756 33.333 0.00 0.00 0.00 5.25
1710 1748 9.774742 GAGTTCTTTTACTTTATTGGTATGCTG 57.225 33.333 0.00 0.00 0.00 4.41
1711 1749 8.665685 CGAGTTCTTTTACTTTATTGGTATGCT 58.334 33.333 0.00 0.00 0.00 3.79
1712 1750 7.428472 GCGAGTTCTTTTACTTTATTGGTATGC 59.572 37.037 0.00 0.00 0.00 3.14
1713 1751 8.665685 AGCGAGTTCTTTTACTTTATTGGTATG 58.334 33.333 0.00 0.00 0.00 2.39
1714 1752 8.788325 AGCGAGTTCTTTTACTTTATTGGTAT 57.212 30.769 0.00 0.00 0.00 2.73
1715 1753 9.143631 GTAGCGAGTTCTTTTACTTTATTGGTA 57.856 33.333 0.00 0.00 0.00 3.25
1716 1754 7.658575 TGTAGCGAGTTCTTTTACTTTATTGGT 59.341 33.333 0.00 0.00 0.00 3.67
1717 1755 8.025243 TGTAGCGAGTTCTTTTACTTTATTGG 57.975 34.615 0.00 0.00 0.00 3.16
1718 1756 9.314501 GTTGTAGCGAGTTCTTTTACTTTATTG 57.685 33.333 0.00 0.00 0.00 1.90
1719 1757 9.048446 TGTTGTAGCGAGTTCTTTTACTTTATT 57.952 29.630 0.00 0.00 0.00 1.40
1720 1758 8.597662 TGTTGTAGCGAGTTCTTTTACTTTAT 57.402 30.769 0.00 0.00 0.00 1.40
1721 1759 8.422973 TTGTTGTAGCGAGTTCTTTTACTTTA 57.577 30.769 0.00 0.00 0.00 1.85
1722 1760 6.913873 TGTTGTAGCGAGTTCTTTTACTTT 57.086 33.333 0.00 0.00 0.00 2.66
1723 1761 6.913873 TTGTTGTAGCGAGTTCTTTTACTT 57.086 33.333 0.00 0.00 0.00 2.24
1724 1762 6.913873 TTTGTTGTAGCGAGTTCTTTTACT 57.086 33.333 0.00 0.00 0.00 2.24
1725 1763 7.642586 ACAATTTGTTGTAGCGAGTTCTTTTAC 59.357 33.333 0.00 0.00 32.60 2.01
1726 1764 7.699566 ACAATTTGTTGTAGCGAGTTCTTTTA 58.300 30.769 0.00 0.00 32.60 1.52
1727 1765 6.560711 ACAATTTGTTGTAGCGAGTTCTTTT 58.439 32.000 0.00 0.00 32.60 2.27
1728 1766 6.131544 ACAATTTGTTGTAGCGAGTTCTTT 57.868 33.333 0.00 0.00 32.60 2.52
1729 1767 5.751243 ACAATTTGTTGTAGCGAGTTCTT 57.249 34.783 0.00 0.00 32.60 2.52
1730 1768 6.854496 TTACAATTTGTTGTAGCGAGTTCT 57.146 33.333 7.45 0.00 38.49 3.01
1731 1769 7.409343 GCATTTACAATTTGTTGTAGCGAGTTC 60.409 37.037 7.45 0.00 38.49 3.01
1732 1770 6.362283 GCATTTACAATTTGTTGTAGCGAGTT 59.638 34.615 7.45 0.00 38.49 3.01
1733 1771 5.856455 GCATTTACAATTTGTTGTAGCGAGT 59.144 36.000 7.45 0.00 38.49 4.18
1734 1772 5.855925 TGCATTTACAATTTGTTGTAGCGAG 59.144 36.000 7.45 0.00 38.49 5.03
1735 1773 5.763088 TGCATTTACAATTTGTTGTAGCGA 58.237 33.333 7.45 0.00 38.49 4.93
1736 1774 6.630676 ATGCATTTACAATTTGTTGTAGCG 57.369 33.333 7.45 0.00 38.49 4.26
1782 1820 9.462606 CACCCAGAAGAAAATACTTATTACCTT 57.537 33.333 0.00 0.00 0.00 3.50
1783 1821 7.556635 GCACCCAGAAGAAAATACTTATTACCT 59.443 37.037 0.00 0.00 0.00 3.08
1784 1822 7.556635 AGCACCCAGAAGAAAATACTTATTACC 59.443 37.037 0.00 0.00 0.00 2.85
1785 1823 8.507524 AGCACCCAGAAGAAAATACTTATTAC 57.492 34.615 0.00 0.00 0.00 1.89
1787 1825 9.700831 ATTAGCACCCAGAAGAAAATACTTATT 57.299 29.630 0.00 0.00 0.00 1.40
1788 1826 9.700831 AATTAGCACCCAGAAGAAAATACTTAT 57.299 29.630 0.00 0.00 0.00 1.73
1789 1827 9.528489 AAATTAGCACCCAGAAGAAAATACTTA 57.472 29.630 0.00 0.00 0.00 2.24
1790 1828 8.306761 CAAATTAGCACCCAGAAGAAAATACTT 58.693 33.333 0.00 0.00 0.00 2.24
1791 1829 7.451566 ACAAATTAGCACCCAGAAGAAAATACT 59.548 33.333 0.00 0.00 0.00 2.12
1792 1830 7.602753 ACAAATTAGCACCCAGAAGAAAATAC 58.397 34.615 0.00 0.00 0.00 1.89
1793 1831 7.775053 ACAAATTAGCACCCAGAAGAAAATA 57.225 32.000 0.00 0.00 0.00 1.40
1794 1832 6.670695 ACAAATTAGCACCCAGAAGAAAAT 57.329 33.333 0.00 0.00 0.00 1.82
1795 1833 6.127196 ACAACAAATTAGCACCCAGAAGAAAA 60.127 34.615 0.00 0.00 0.00 2.29
1796 1834 5.362430 ACAACAAATTAGCACCCAGAAGAAA 59.638 36.000 0.00 0.00 0.00 2.52
1797 1835 4.892934 ACAACAAATTAGCACCCAGAAGAA 59.107 37.500 0.00 0.00 0.00 2.52
1798 1836 4.469657 ACAACAAATTAGCACCCAGAAGA 58.530 39.130 0.00 0.00 0.00 2.87
1799 1837 4.613622 CGACAACAAATTAGCACCCAGAAG 60.614 45.833 0.00 0.00 0.00 2.85
1800 1838 3.252215 CGACAACAAATTAGCACCCAGAA 59.748 43.478 0.00 0.00 0.00 3.02
1801 1839 2.811431 CGACAACAAATTAGCACCCAGA 59.189 45.455 0.00 0.00 0.00 3.86
1802 1840 2.668279 GCGACAACAAATTAGCACCCAG 60.668 50.000 0.00 0.00 0.00 4.45
1803 1841 1.268352 GCGACAACAAATTAGCACCCA 59.732 47.619 0.00 0.00 0.00 4.51
1804 1842 1.539827 AGCGACAACAAATTAGCACCC 59.460 47.619 0.00 0.00 0.00 4.61
1805 1843 2.584791 CAGCGACAACAAATTAGCACC 58.415 47.619 0.00 0.00 0.00 5.01
1806 1844 2.031157 ACCAGCGACAACAAATTAGCAC 60.031 45.455 0.00 0.00 0.00 4.40
1807 1845 2.226330 ACCAGCGACAACAAATTAGCA 58.774 42.857 0.00 0.00 0.00 3.49
1808 1846 2.989422 ACCAGCGACAACAAATTAGC 57.011 45.000 0.00 0.00 0.00 3.09
1809 1847 5.144359 GTGTAACCAGCGACAACAAATTAG 58.856 41.667 0.00 0.00 0.00 1.73
1810 1848 4.575236 TGTGTAACCAGCGACAACAAATTA 59.425 37.500 0.00 0.00 34.36 1.40
1811 1849 3.378742 TGTGTAACCAGCGACAACAAATT 59.621 39.130 0.00 0.00 34.36 1.82
1812 1850 2.946329 TGTGTAACCAGCGACAACAAAT 59.054 40.909 0.00 0.00 34.36 2.32
1813 1851 2.357075 TGTGTAACCAGCGACAACAAA 58.643 42.857 0.00 0.00 34.36 2.83
1814 1852 2.025589 TGTGTAACCAGCGACAACAA 57.974 45.000 0.00 0.00 34.36 2.83
1815 1853 2.139917 GATGTGTAACCAGCGACAACA 58.860 47.619 0.00 0.00 34.36 3.33
1816 1854 2.139917 TGATGTGTAACCAGCGACAAC 58.860 47.619 0.00 0.00 34.36 3.32
1817 1855 2.535012 TGATGTGTAACCAGCGACAA 57.465 45.000 0.00 0.00 34.36 3.18
1818 1856 2.760634 ATGATGTGTAACCAGCGACA 57.239 45.000 0.00 0.00 34.36 4.35
1819 1857 5.293324 TGAATAATGATGTGTAACCAGCGAC 59.707 40.000 0.00 0.00 34.36 5.19
1820 1858 5.423886 TGAATAATGATGTGTAACCAGCGA 58.576 37.500 0.00 0.00 34.36 4.93
1821 1859 5.733226 TGAATAATGATGTGTAACCAGCG 57.267 39.130 0.00 0.00 34.36 5.18
1822 1860 9.669353 CTAATTGAATAATGATGTGTAACCAGC 57.331 33.333 0.00 0.00 34.36 4.85
1824 1862 9.693739 ACCTAATTGAATAATGATGTGTAACCA 57.306 29.630 0.00 0.00 34.36 3.67
1825 1863 9.950680 CACCTAATTGAATAATGATGTGTAACC 57.049 33.333 0.00 0.00 34.36 2.85
1829 1867 9.679661 TGTACACCTAATTGAATAATGATGTGT 57.320 29.630 0.00 0.00 36.57 3.72
1839 1877 9.253832 TGGATTCAAATGTACACCTAATTGAAT 57.746 29.630 22.15 22.15 45.21 2.57
1840 1878 8.642935 TGGATTCAAATGTACACCTAATTGAA 57.357 30.769 17.43 17.43 40.01 2.69
1841 1879 8.821686 ATGGATTCAAATGTACACCTAATTGA 57.178 30.769 0.00 1.94 0.00 2.57
1842 1880 9.874205 AAATGGATTCAAATGTACACCTAATTG 57.126 29.630 0.00 0.00 0.00 2.32
1847 1885 9.479549 AGATAAAATGGATTCAAATGTACACCT 57.520 29.630 0.00 0.00 0.00 4.00
1943 1981 9.937175 GCTGCGTATAGAATTTCTTTTTAATCT 57.063 29.630 3.86 0.00 0.00 2.40
1944 1982 9.716507 TGCTGCGTATAGAATTTCTTTTTAATC 57.283 29.630 3.86 0.00 0.00 1.75
1946 1984 9.502145 CATGCTGCGTATAGAATTTCTTTTTAA 57.498 29.630 3.86 0.00 0.00 1.52
1947 1985 7.643764 GCATGCTGCGTATAGAATTTCTTTTTA 59.356 33.333 11.37 0.00 31.71 1.52
1948 1986 6.473455 GCATGCTGCGTATAGAATTTCTTTTT 59.527 34.615 11.37 0.00 31.71 1.94
1949 1987 5.973565 GCATGCTGCGTATAGAATTTCTTTT 59.026 36.000 11.37 0.00 31.71 2.27
1950 1988 5.514279 GCATGCTGCGTATAGAATTTCTTT 58.486 37.500 11.37 0.00 31.71 2.52
1951 1989 5.100751 GCATGCTGCGTATAGAATTTCTT 57.899 39.130 11.37 0.00 31.71 2.52
1952 1990 4.739046 GCATGCTGCGTATAGAATTTCT 57.261 40.909 11.37 4.03 31.71 2.52
1965 2003 3.515286 AGCCATCACGCATGCTGC 61.515 61.111 17.13 8.41 40.69 5.25
1966 2004 1.929806 AACAGCCATCACGCATGCTG 61.930 55.000 17.13 12.94 40.09 4.41
1967 2005 1.246056 AAACAGCCATCACGCATGCT 61.246 50.000 17.13 0.00 0.00 3.79
1968 2006 0.451383 TAAACAGCCATCACGCATGC 59.549 50.000 7.91 7.91 0.00 4.06
1969 2007 2.723209 CATAAACAGCCATCACGCATG 58.277 47.619 0.00 0.00 0.00 4.06
1970 2008 1.066002 GCATAAACAGCCATCACGCAT 59.934 47.619 0.00 0.00 0.00 4.73
1971 2009 0.451383 GCATAAACAGCCATCACGCA 59.549 50.000 0.00 0.00 0.00 5.24
1972 2010 0.451383 TGCATAAACAGCCATCACGC 59.549 50.000 0.00 0.00 0.00 5.34
1973 2011 2.917701 TTGCATAAACAGCCATCACG 57.082 45.000 0.00 0.00 0.00 4.35
1974 2012 7.593875 TTTTTATTGCATAAACAGCCATCAC 57.406 32.000 0.00 0.00 34.68 3.06
1975 2013 8.039538 TCATTTTTATTGCATAAACAGCCATCA 58.960 29.630 0.00 0.00 34.68 3.07
1976 2014 8.422973 TCATTTTTATTGCATAAACAGCCATC 57.577 30.769 0.00 0.00 34.68 3.51
1977 2015 8.667463 GTTCATTTTTATTGCATAAACAGCCAT 58.333 29.630 0.00 0.00 34.68 4.40
1978 2016 7.118971 GGTTCATTTTTATTGCATAAACAGCCA 59.881 33.333 0.00 0.00 34.68 4.75
1979 2017 7.118971 TGGTTCATTTTTATTGCATAAACAGCC 59.881 33.333 0.00 0.00 34.68 4.85
1980 2018 8.027440 TGGTTCATTTTTATTGCATAAACAGC 57.973 30.769 0.00 0.00 34.68 4.40
1981 2019 9.976255 CATGGTTCATTTTTATTGCATAAACAG 57.024 29.630 0.00 0.00 34.68 3.16
1982 2020 9.716531 TCATGGTTCATTTTTATTGCATAAACA 57.283 25.926 0.00 0.00 34.68 2.83
1985 2023 9.327628 CCATCATGGTTCATTTTTATTGCATAA 57.672 29.630 0.00 0.00 31.35 1.90
1986 2024 7.441760 GCCATCATGGTTCATTTTTATTGCATA 59.558 33.333 5.31 0.00 40.46 3.14
1987 2025 6.261381 GCCATCATGGTTCATTTTTATTGCAT 59.739 34.615 5.31 0.00 40.46 3.96
1988 2026 5.585445 GCCATCATGGTTCATTTTTATTGCA 59.415 36.000 5.31 0.00 40.46 4.08
1989 2027 5.818857 AGCCATCATGGTTCATTTTTATTGC 59.181 36.000 5.31 0.00 40.46 3.56
1990 2028 7.767198 AGAAGCCATCATGGTTCATTTTTATTG 59.233 33.333 16.66 0.00 40.46 1.90
1991 2029 7.854337 AGAAGCCATCATGGTTCATTTTTATT 58.146 30.769 16.66 0.00 40.46 1.40
1992 2030 7.343833 AGAGAAGCCATCATGGTTCATTTTTAT 59.656 33.333 16.66 0.50 40.46 1.40
1993 2031 6.664816 AGAGAAGCCATCATGGTTCATTTTTA 59.335 34.615 16.66 0.00 40.46 1.52
1994 2032 5.482878 AGAGAAGCCATCATGGTTCATTTTT 59.517 36.000 16.66 1.57 40.46 1.94
1995 2033 5.021458 AGAGAAGCCATCATGGTTCATTTT 58.979 37.500 16.66 0.64 40.46 1.82
1996 2034 4.607239 AGAGAAGCCATCATGGTTCATTT 58.393 39.130 16.66 1.94 40.46 2.32
1997 2035 4.246712 AGAGAAGCCATCATGGTTCATT 57.753 40.909 16.66 4.21 40.46 2.57
1998 2036 3.947612 AGAGAAGCCATCATGGTTCAT 57.052 42.857 16.66 0.58 40.46 2.57
1999 2037 3.349927 CAAGAGAAGCCATCATGGTTCA 58.650 45.455 16.66 0.00 40.46 3.18
2000 2038 2.686915 CCAAGAGAAGCCATCATGGTTC 59.313 50.000 5.31 8.08 40.46 3.62
2001 2039 2.042162 ACCAAGAGAAGCCATCATGGTT 59.958 45.455 5.31 0.00 40.46 3.67
2002 2040 1.637553 ACCAAGAGAAGCCATCATGGT 59.362 47.619 5.31 4.90 40.46 3.55
2003 2041 2.426024 CAACCAAGAGAAGCCATCATGG 59.574 50.000 0.00 0.00 41.55 3.66
2004 2042 3.087031 ACAACCAAGAGAAGCCATCATG 58.913 45.455 0.00 0.00 0.00 3.07
2005 2043 3.446442 ACAACCAAGAGAAGCCATCAT 57.554 42.857 0.00 0.00 0.00 2.45
2006 2044 2.957402 ACAACCAAGAGAAGCCATCA 57.043 45.000 0.00 0.00 0.00 3.07
2007 2045 3.057946 GTGAACAACCAAGAGAAGCCATC 60.058 47.826 0.00 0.00 0.00 3.51
2008 2046 2.887152 GTGAACAACCAAGAGAAGCCAT 59.113 45.455 0.00 0.00 0.00 4.40
2009 2047 2.297701 GTGAACAACCAAGAGAAGCCA 58.702 47.619 0.00 0.00 0.00 4.75
2010 2048 2.297701 TGTGAACAACCAAGAGAAGCC 58.702 47.619 0.00 0.00 0.00 4.35
2023 2061 7.865385 GCTCCAAAAATAGTATTGTTGTGAACA 59.135 33.333 19.86 0.00 40.21 3.18
2024 2062 7.328493 GGCTCCAAAAATAGTATTGTTGTGAAC 59.672 37.037 19.86 13.30 0.00 3.18
2025 2063 7.014711 TGGCTCCAAAAATAGTATTGTTGTGAA 59.985 33.333 19.86 8.15 0.00 3.18
2026 2064 6.491745 TGGCTCCAAAAATAGTATTGTTGTGA 59.508 34.615 19.86 15.86 0.00 3.58
2027 2065 6.686630 TGGCTCCAAAAATAGTATTGTTGTG 58.313 36.000 19.86 14.46 0.00 3.33
2028 2066 6.909550 TGGCTCCAAAAATAGTATTGTTGT 57.090 33.333 19.86 0.00 0.00 3.32
2029 2067 7.378181 AGTTGGCTCCAAAAATAGTATTGTTG 58.622 34.615 16.14 16.14 37.70 3.33
2030 2068 7.232534 TGAGTTGGCTCCAAAAATAGTATTGTT 59.767 33.333 2.45 0.00 40.95 2.83
2031 2069 6.719370 TGAGTTGGCTCCAAAAATAGTATTGT 59.281 34.615 2.45 0.00 40.95 2.71
2032 2070 7.029563 GTGAGTTGGCTCCAAAAATAGTATTG 58.970 38.462 2.45 0.00 40.95 1.90
2033 2071 6.719370 TGTGAGTTGGCTCCAAAAATAGTATT 59.281 34.615 2.45 0.00 40.95 1.89
2034 2072 6.245408 TGTGAGTTGGCTCCAAAAATAGTAT 58.755 36.000 2.45 0.00 40.95 2.12
2035 2073 5.626142 TGTGAGTTGGCTCCAAAAATAGTA 58.374 37.500 2.45 0.00 40.95 1.82
2036 2074 4.469657 TGTGAGTTGGCTCCAAAAATAGT 58.530 39.130 2.45 0.00 40.95 2.12
2037 2075 5.241506 TCTTGTGAGTTGGCTCCAAAAATAG 59.758 40.000 2.45 0.00 40.95 1.73
2038 2076 5.136828 TCTTGTGAGTTGGCTCCAAAAATA 58.863 37.500 2.45 0.00 40.95 1.40
2039 2077 3.960102 TCTTGTGAGTTGGCTCCAAAAAT 59.040 39.130 2.45 0.00 40.95 1.82
2040 2078 3.360867 TCTTGTGAGTTGGCTCCAAAAA 58.639 40.909 2.45 0.00 40.95 1.94
2041 2079 3.011566 TCTTGTGAGTTGGCTCCAAAA 57.988 42.857 2.45 0.00 40.95 2.44
2042 2080 2.687935 GTTCTTGTGAGTTGGCTCCAAA 59.312 45.455 2.45 0.00 40.95 3.28
2043 2081 2.297701 GTTCTTGTGAGTTGGCTCCAA 58.702 47.619 0.00 0.00 40.95 3.53
2044 2082 1.476833 GGTTCTTGTGAGTTGGCTCCA 60.477 52.381 0.00 0.00 40.95 3.86
2045 2083 1.239347 GGTTCTTGTGAGTTGGCTCC 58.761 55.000 0.00 0.00 40.95 4.70
2046 2084 1.876156 CTGGTTCTTGTGAGTTGGCTC 59.124 52.381 0.00 0.00 41.97 4.70
2047 2085 1.477558 CCTGGTTCTTGTGAGTTGGCT 60.478 52.381 0.00 0.00 0.00 4.75
2048 2086 0.954452 CCTGGTTCTTGTGAGTTGGC 59.046 55.000 0.00 0.00 0.00 4.52
2049 2087 2.638480 TCCTGGTTCTTGTGAGTTGG 57.362 50.000 0.00 0.00 0.00 3.77
2050 2088 2.291741 GCTTCCTGGTTCTTGTGAGTTG 59.708 50.000 0.00 0.00 0.00 3.16
2051 2089 2.092429 TGCTTCCTGGTTCTTGTGAGTT 60.092 45.455 0.00 0.00 0.00 3.01
2052 2090 1.490490 TGCTTCCTGGTTCTTGTGAGT 59.510 47.619 0.00 0.00 0.00 3.41
2053 2091 2.260844 TGCTTCCTGGTTCTTGTGAG 57.739 50.000 0.00 0.00 0.00 3.51
2054 2092 2.727123 TTGCTTCCTGGTTCTTGTGA 57.273 45.000 0.00 0.00 0.00 3.58
2055 2093 3.799281 TTTTGCTTCCTGGTTCTTGTG 57.201 42.857 0.00 0.00 0.00 3.33
2056 2094 3.960102 TGATTTTGCTTCCTGGTTCTTGT 59.040 39.130 0.00 0.00 0.00 3.16
2057 2095 4.589216 TGATTTTGCTTCCTGGTTCTTG 57.411 40.909 0.00 0.00 0.00 3.02
2058 2096 5.104982 TGTTTGATTTTGCTTCCTGGTTCTT 60.105 36.000 0.00 0.00 0.00 2.52
2059 2097 4.405358 TGTTTGATTTTGCTTCCTGGTTCT 59.595 37.500 0.00 0.00 0.00 3.01
2060 2098 4.692228 TGTTTGATTTTGCTTCCTGGTTC 58.308 39.130 0.00 0.00 0.00 3.62
2061 2099 4.751767 TGTTTGATTTTGCTTCCTGGTT 57.248 36.364 0.00 0.00 0.00 3.67
2062 2100 4.751767 TTGTTTGATTTTGCTTCCTGGT 57.248 36.364 0.00 0.00 0.00 4.00
2063 2101 5.299148 TGATTGTTTGATTTTGCTTCCTGG 58.701 37.500 0.00 0.00 0.00 4.45
2064 2102 6.847956 TTGATTGTTTGATTTTGCTTCCTG 57.152 33.333 0.00 0.00 0.00 3.86
2065 2103 6.017687 GCTTTGATTGTTTGATTTTGCTTCCT 60.018 34.615 0.00 0.00 0.00 3.36
2066 2104 6.017687 AGCTTTGATTGTTTGATTTTGCTTCC 60.018 34.615 0.00 0.00 0.00 3.46
2067 2105 6.951643 AGCTTTGATTGTTTGATTTTGCTTC 58.048 32.000 0.00 0.00 0.00 3.86
2068 2106 6.017687 GGAGCTTTGATTGTTTGATTTTGCTT 60.018 34.615 0.00 0.00 0.00 3.91
2069 2107 5.467735 GGAGCTTTGATTGTTTGATTTTGCT 59.532 36.000 0.00 0.00 0.00 3.91
2070 2108 5.467735 AGGAGCTTTGATTGTTTGATTTTGC 59.532 36.000 0.00 0.00 0.00 3.68
2071 2109 7.011669 ACAAGGAGCTTTGATTGTTTGATTTTG 59.988 33.333 5.15 0.00 32.10 2.44
2072 2110 7.049754 ACAAGGAGCTTTGATTGTTTGATTTT 58.950 30.769 5.15 0.00 32.10 1.82
2073 2111 6.585416 ACAAGGAGCTTTGATTGTTTGATTT 58.415 32.000 5.15 0.00 32.10 2.17
2074 2112 6.165700 ACAAGGAGCTTTGATTGTTTGATT 57.834 33.333 5.15 0.00 32.10 2.57
2075 2113 5.796424 ACAAGGAGCTTTGATTGTTTGAT 57.204 34.783 5.15 0.00 32.10 2.57
2076 2114 5.596836 AACAAGGAGCTTTGATTGTTTGA 57.403 34.783 5.15 0.00 41.73 2.69
2115 2153 4.331108 AGCCTTTTGCCTTGTTTCAAAAA 58.669 34.783 0.00 0.00 40.36 1.94
2116 2154 3.949132 AGCCTTTTGCCTTGTTTCAAAA 58.051 36.364 0.00 0.00 42.71 2.44
2117 2155 3.625649 AGCCTTTTGCCTTGTTTCAAA 57.374 38.095 0.00 0.00 42.71 2.69
2118 2156 3.269178 CAAGCCTTTTGCCTTGTTTCAA 58.731 40.909 0.00 0.00 42.71 2.69
2119 2157 2.903798 CAAGCCTTTTGCCTTGTTTCA 58.096 42.857 0.00 0.00 42.71 2.69
2120 2158 1.599071 GCAAGCCTTTTGCCTTGTTTC 59.401 47.619 0.54 0.00 42.71 2.78
2121 2159 1.667236 GCAAGCCTTTTGCCTTGTTT 58.333 45.000 0.54 0.00 42.71 2.83
2122 2160 3.384816 GCAAGCCTTTTGCCTTGTT 57.615 47.368 0.54 0.00 42.71 2.83
2128 2166 2.220313 TGAAAATGGCAAGCCTTTTGC 58.780 42.857 21.13 19.89 40.92 3.68
2129 2167 6.557291 TTAATGAAAATGGCAAGCCTTTTG 57.443 33.333 21.13 0.00 40.92 2.44
2130 2168 8.860780 TTATTAATGAAAATGGCAAGCCTTTT 57.139 26.923 16.50 16.50 42.75 2.27
2131 2169 8.860780 TTTATTAATGAAAATGGCAAGCCTTT 57.139 26.923 12.96 9.49 36.94 3.11
2132 2170 8.320617 TCTTTATTAATGAAAATGGCAAGCCTT 58.679 29.630 12.96 2.83 36.94 4.35
2133 2171 7.850193 TCTTTATTAATGAAAATGGCAAGCCT 58.150 30.769 12.96 0.00 36.94 4.58
2134 2172 7.225341 CCTCTTTATTAATGAAAATGGCAAGCC 59.775 37.037 3.61 3.61 0.00 4.35
2135 2173 7.981225 TCCTCTTTATTAATGAAAATGGCAAGC 59.019 33.333 0.00 0.00 0.00 4.01
2136 2174 9.525409 CTCCTCTTTATTAATGAAAATGGCAAG 57.475 33.333 0.00 0.00 0.00 4.01
2137 2175 8.477256 CCTCCTCTTTATTAATGAAAATGGCAA 58.523 33.333 0.00 0.00 0.00 4.52
2138 2176 7.069826 CCCTCCTCTTTATTAATGAAAATGGCA 59.930 37.037 0.00 0.00 0.00 4.92
2139 2177 7.069950 ACCCTCCTCTTTATTAATGAAAATGGC 59.930 37.037 0.00 0.00 0.00 4.40
2140 2178 8.539117 ACCCTCCTCTTTATTAATGAAAATGG 57.461 34.615 0.00 0.00 0.00 3.16
2146 2184 9.901172 GTCTTAAACCCTCCTCTTTATTAATGA 57.099 33.333 0.00 0.00 0.00 2.57
2147 2185 9.681062 TGTCTTAAACCCTCCTCTTTATTAATG 57.319 33.333 0.00 0.00 0.00 1.90
2149 2187 9.734984 CTTGTCTTAAACCCTCCTCTTTATTAA 57.265 33.333 0.00 0.00 0.00 1.40
2150 2188 8.326529 CCTTGTCTTAAACCCTCCTCTTTATTA 58.673 37.037 0.00 0.00 0.00 0.98
2151 2189 7.018249 TCCTTGTCTTAAACCCTCCTCTTTATT 59.982 37.037 0.00 0.00 0.00 1.40
2152 2190 6.504279 TCCTTGTCTTAAACCCTCCTCTTTAT 59.496 38.462 0.00 0.00 0.00 1.40
2153 2191 5.847817 TCCTTGTCTTAAACCCTCCTCTTTA 59.152 40.000 0.00 0.00 0.00 1.85
2154 2192 4.663592 TCCTTGTCTTAAACCCTCCTCTTT 59.336 41.667 0.00 0.00 0.00 2.52
2155 2193 4.240323 TCCTTGTCTTAAACCCTCCTCTT 58.760 43.478 0.00 0.00 0.00 2.85
2156 2194 3.870559 TCCTTGTCTTAAACCCTCCTCT 58.129 45.455 0.00 0.00 0.00 3.69
2157 2195 4.384318 GGATCCTTGTCTTAAACCCTCCTC 60.384 50.000 3.84 0.00 0.00 3.71
2158 2196 3.523972 GGATCCTTGTCTTAAACCCTCCT 59.476 47.826 3.84 0.00 0.00 3.69
2159 2197 3.681874 CGGATCCTTGTCTTAAACCCTCC 60.682 52.174 10.75 0.00 0.00 4.30
2160 2198 3.055312 ACGGATCCTTGTCTTAAACCCTC 60.055 47.826 10.75 0.00 0.00 4.30
2161 2199 2.910977 ACGGATCCTTGTCTTAAACCCT 59.089 45.455 10.75 0.00 0.00 4.34
2162 2200 3.345508 ACGGATCCTTGTCTTAAACCC 57.654 47.619 10.75 0.00 0.00 4.11
2163 2201 5.107824 GTCTACGGATCCTTGTCTTAAACC 58.892 45.833 10.75 0.00 0.00 3.27
2164 2202 5.717119 TGTCTACGGATCCTTGTCTTAAAC 58.283 41.667 10.75 0.00 0.00 2.01
2165 2203 5.105473 CCTGTCTACGGATCCTTGTCTTAAA 60.105 44.000 10.75 0.00 0.00 1.52
2166 2204 4.401519 CCTGTCTACGGATCCTTGTCTTAA 59.598 45.833 10.75 0.00 0.00 1.85
2167 2205 3.952323 CCTGTCTACGGATCCTTGTCTTA 59.048 47.826 10.75 0.00 0.00 2.10
2168 2206 2.761208 CCTGTCTACGGATCCTTGTCTT 59.239 50.000 10.75 0.00 0.00 3.01
2169 2207 2.379972 CCTGTCTACGGATCCTTGTCT 58.620 52.381 10.75 0.00 0.00 3.41
2170 2208 1.409427 CCCTGTCTACGGATCCTTGTC 59.591 57.143 10.75 0.00 0.00 3.18
2171 2209 1.273098 ACCCTGTCTACGGATCCTTGT 60.273 52.381 10.75 3.69 0.00 3.16
2172 2210 1.486211 ACCCTGTCTACGGATCCTTG 58.514 55.000 10.75 0.00 0.00 3.61
2173 2211 3.393426 TTACCCTGTCTACGGATCCTT 57.607 47.619 10.75 2.37 0.00 3.36
2174 2212 3.393426 TTTACCCTGTCTACGGATCCT 57.607 47.619 10.75 0.00 0.00 3.24
2175 2213 4.476628 TTTTTACCCTGTCTACGGATCC 57.523 45.455 0.00 0.00 0.00 3.36
2194 2232 2.069273 CGCGAGAGTGATGGACTTTTT 58.931 47.619 0.00 0.00 46.66 1.94
2195 2233 1.714794 CGCGAGAGTGATGGACTTTT 58.285 50.000 0.00 0.00 46.66 2.27
2196 2234 3.425578 CGCGAGAGTGATGGACTTT 57.574 52.632 0.00 0.00 46.66 2.66
2205 2243 2.090658 GTGTTGTAATGTCGCGAGAGTG 59.909 50.000 16.93 0.00 43.49 3.51
2206 2244 2.325761 GTGTTGTAATGTCGCGAGAGT 58.674 47.619 10.24 11.17 43.49 3.24
2207 2245 1.654105 GGTGTTGTAATGTCGCGAGAG 59.346 52.381 10.24 0.00 43.49 3.20
2208 2246 1.670674 GGGTGTTGTAATGTCGCGAGA 60.671 52.381 10.24 9.54 38.16 4.04
2209 2247 0.719465 GGGTGTTGTAATGTCGCGAG 59.281 55.000 10.24 0.00 0.00 5.03
2210 2248 0.033642 TGGGTGTTGTAATGTCGCGA 59.966 50.000 3.71 3.71 0.00 5.87
2211 2249 0.869068 TTGGGTGTTGTAATGTCGCG 59.131 50.000 0.00 0.00 0.00 5.87
2212 2250 1.877443 ACTTGGGTGTTGTAATGTCGC 59.123 47.619 0.00 0.00 0.00 5.19
2213 2251 4.561735 AAACTTGGGTGTTGTAATGTCG 57.438 40.909 0.00 0.00 0.00 4.35
2214 2252 5.457473 CGAAAAACTTGGGTGTTGTAATGTC 59.543 40.000 0.00 0.00 0.00 3.06
2215 2253 5.344884 CGAAAAACTTGGGTGTTGTAATGT 58.655 37.500 0.00 0.00 0.00 2.71
2216 2254 4.208253 GCGAAAAACTTGGGTGTTGTAATG 59.792 41.667 0.00 0.00 0.00 1.90
2217 2255 4.098807 AGCGAAAAACTTGGGTGTTGTAAT 59.901 37.500 0.00 0.00 0.00 1.89
2218 2256 3.444388 AGCGAAAAACTTGGGTGTTGTAA 59.556 39.130 0.00 0.00 0.00 2.41
2219 2257 3.018149 AGCGAAAAACTTGGGTGTTGTA 58.982 40.909 0.00 0.00 0.00 2.41
2220 2258 1.822371 AGCGAAAAACTTGGGTGTTGT 59.178 42.857 0.00 0.00 0.00 3.32
2221 2259 2.459934 GAGCGAAAAACTTGGGTGTTG 58.540 47.619 0.00 0.00 0.00 3.33
2222 2260 1.407618 GGAGCGAAAAACTTGGGTGTT 59.592 47.619 0.00 0.00 0.00 3.32
2223 2261 1.029681 GGAGCGAAAAACTTGGGTGT 58.970 50.000 0.00 0.00 0.00 4.16
2224 2262 0.313987 GGGAGCGAAAAACTTGGGTG 59.686 55.000 0.00 0.00 0.00 4.61
2225 2263 1.170290 CGGGAGCGAAAAACTTGGGT 61.170 55.000 0.00 0.00 0.00 4.51
2226 2264 1.579429 CGGGAGCGAAAAACTTGGG 59.421 57.895 0.00 0.00 0.00 4.12
2239 2277 2.040009 ATTACGGGTGATGGCGGGAG 62.040 60.000 0.00 0.00 0.00 4.30
2240 2278 2.035237 GATTACGGGTGATGGCGGGA 62.035 60.000 0.00 0.00 0.00 5.14
2241 2279 1.597027 GATTACGGGTGATGGCGGG 60.597 63.158 0.00 0.00 0.00 6.13
2242 2280 0.677288 TAGATTACGGGTGATGGCGG 59.323 55.000 0.00 0.00 0.00 6.13
2243 2281 2.132762 GTTAGATTACGGGTGATGGCG 58.867 52.381 0.00 0.00 0.00 5.69
2244 2282 3.470645 AGTTAGATTACGGGTGATGGC 57.529 47.619 0.00 0.00 0.00 4.40
2245 2283 5.183228 ACAAAGTTAGATTACGGGTGATGG 58.817 41.667 0.00 0.00 0.00 3.51
2246 2284 5.293569 GGACAAAGTTAGATTACGGGTGATG 59.706 44.000 0.00 0.00 0.00 3.07
2247 2285 5.189145 AGGACAAAGTTAGATTACGGGTGAT 59.811 40.000 0.00 0.00 0.00 3.06
2248 2286 4.529377 AGGACAAAGTTAGATTACGGGTGA 59.471 41.667 0.00 0.00 0.00 4.02
2249 2287 4.828829 AGGACAAAGTTAGATTACGGGTG 58.171 43.478 0.00 0.00 0.00 4.61
2250 2288 5.494390 AAGGACAAAGTTAGATTACGGGT 57.506 39.130 0.00 0.00 0.00 5.28
2251 2289 7.551617 ACATTAAGGACAAAGTTAGATTACGGG 59.448 37.037 0.00 0.00 0.00 5.28
2252 2290 8.488651 ACATTAAGGACAAAGTTAGATTACGG 57.511 34.615 0.00 0.00 0.00 4.02
2256 2294 8.021396 GCGAAACATTAAGGACAAAGTTAGATT 58.979 33.333 0.00 0.00 0.00 2.40
2257 2295 7.174253 TGCGAAACATTAAGGACAAAGTTAGAT 59.826 33.333 0.00 0.00 0.00 1.98
2258 2296 6.483974 TGCGAAACATTAAGGACAAAGTTAGA 59.516 34.615 0.00 0.00 0.00 2.10
2259 2297 6.577427 GTGCGAAACATTAAGGACAAAGTTAG 59.423 38.462 0.00 0.00 0.00 2.34
2260 2298 6.261381 AGTGCGAAACATTAAGGACAAAGTTA 59.739 34.615 0.00 0.00 0.00 2.24
2261 2299 5.067283 AGTGCGAAACATTAAGGACAAAGTT 59.933 36.000 0.00 0.00 0.00 2.66
2262 2300 4.578928 AGTGCGAAACATTAAGGACAAAGT 59.421 37.500 0.00 0.00 0.00 2.66
2263 2301 5.108385 AGTGCGAAACATTAAGGACAAAG 57.892 39.130 0.00 0.00 0.00 2.77
2264 2302 5.334569 GCTAGTGCGAAACATTAAGGACAAA 60.335 40.000 0.00 0.00 0.00 2.83
2265 2303 4.153475 GCTAGTGCGAAACATTAAGGACAA 59.847 41.667 0.00 0.00 0.00 3.18
2266 2304 3.682858 GCTAGTGCGAAACATTAAGGACA 59.317 43.478 0.00 0.00 0.00 4.02
2267 2305 3.682858 TGCTAGTGCGAAACATTAAGGAC 59.317 43.478 0.00 0.00 43.34 3.85
2268 2306 3.682858 GTGCTAGTGCGAAACATTAAGGA 59.317 43.478 0.00 0.00 43.34 3.36
2269 2307 3.181510 GGTGCTAGTGCGAAACATTAAGG 60.182 47.826 0.00 0.00 43.34 2.69
2270 2308 3.483574 CGGTGCTAGTGCGAAACATTAAG 60.484 47.826 0.00 0.00 43.34 1.85
2271 2309 2.413796 CGGTGCTAGTGCGAAACATTAA 59.586 45.455 0.00 0.00 43.34 1.40
2272 2310 1.996898 CGGTGCTAGTGCGAAACATTA 59.003 47.619 0.00 0.00 43.34 1.90
2273 2311 0.796312 CGGTGCTAGTGCGAAACATT 59.204 50.000 0.00 0.00 43.34 2.71
2274 2312 0.320421 ACGGTGCTAGTGCGAAACAT 60.320 50.000 0.00 0.00 43.34 2.71
2275 2313 1.068417 ACGGTGCTAGTGCGAAACA 59.932 52.632 0.00 0.00 43.34 2.83
2276 2314 0.942410 TCACGGTGCTAGTGCGAAAC 60.942 55.000 2.51 0.00 43.34 2.78
2277 2315 0.037697 ATCACGGTGCTAGTGCGAAA 60.038 50.000 2.51 0.00 43.34 3.46
2278 2316 0.735978 CATCACGGTGCTAGTGCGAA 60.736 55.000 2.51 0.00 43.34 4.70
2279 2317 1.153842 CATCACGGTGCTAGTGCGA 60.154 57.895 2.51 0.00 43.34 5.10
2280 2318 2.167219 CCATCACGGTGCTAGTGCG 61.167 63.158 2.51 0.00 43.34 5.34
2281 2319 1.815421 CCCATCACGGTGCTAGTGC 60.815 63.158 2.51 0.00 39.31 4.40
2282 2320 1.153369 CCCCATCACGGTGCTAGTG 60.153 63.158 2.51 0.00 40.71 2.74
2283 2321 2.367202 CCCCCATCACGGTGCTAGT 61.367 63.158 2.51 0.00 0.00 2.57
2284 2322 1.910580 AACCCCCATCACGGTGCTAG 61.911 60.000 2.51 0.00 30.96 3.42
2285 2323 1.921346 AACCCCCATCACGGTGCTA 60.921 57.895 2.51 0.00 30.96 3.49
2286 2324 3.256960 AACCCCCATCACGGTGCT 61.257 61.111 2.51 0.00 30.96 4.40
2287 2325 3.061848 CAACCCCCATCACGGTGC 61.062 66.667 2.51 0.00 30.96 5.01
2288 2326 3.061848 GCAACCCCCATCACGGTG 61.062 66.667 0.56 0.56 30.96 4.94
2289 2327 4.360405 GGCAACCCCCATCACGGT 62.360 66.667 0.00 0.00 0.00 4.83
2291 2329 4.402528 TCGGCAACCCCCATCACG 62.403 66.667 0.00 0.00 0.00 4.35
2292 2330 2.438434 CTCGGCAACCCCCATCAC 60.438 66.667 0.00 0.00 0.00 3.06
2293 2331 2.534396 AACTCGGCAACCCCCATCA 61.534 57.895 0.00 0.00 0.00 3.07
2294 2332 2.046285 CAACTCGGCAACCCCCATC 61.046 63.158 0.00 0.00 0.00 3.51
2295 2333 2.035626 CAACTCGGCAACCCCCAT 59.964 61.111 0.00 0.00 0.00 4.00
2296 2334 4.966787 GCAACTCGGCAACCCCCA 62.967 66.667 0.00 0.00 0.00 4.96
2306 2344 0.794981 CGAGAGTCTTCCGCAACTCG 60.795 60.000 0.00 0.00 45.25 4.18
2307 2345 3.022981 CGAGAGTCTTCCGCAACTC 57.977 57.895 0.00 0.00 41.81 3.01
2313 2351 0.737367 TGCAATGCGAGAGTCTTCCG 60.737 55.000 0.00 0.00 0.00 4.30
2314 2352 0.723981 GTGCAATGCGAGAGTCTTCC 59.276 55.000 0.00 0.00 0.00 3.46
2315 2353 1.658095 GAGTGCAATGCGAGAGTCTTC 59.342 52.381 0.00 0.00 0.00 2.87
2316 2354 1.674221 GGAGTGCAATGCGAGAGTCTT 60.674 52.381 0.00 0.00 0.00 3.01
2317 2355 0.108424 GGAGTGCAATGCGAGAGTCT 60.108 55.000 0.00 0.00 0.00 3.24
2318 2356 0.108424 AGGAGTGCAATGCGAGAGTC 60.108 55.000 0.00 0.00 0.00 3.36
2319 2357 0.322975 AAGGAGTGCAATGCGAGAGT 59.677 50.000 0.00 0.00 0.00 3.24
2320 2358 1.005340 GAAGGAGTGCAATGCGAGAG 58.995 55.000 0.00 0.00 0.00 3.20
2321 2359 0.391661 GGAAGGAGTGCAATGCGAGA 60.392 55.000 0.00 0.00 0.00 4.04
2322 2360 0.674581 TGGAAGGAGTGCAATGCGAG 60.675 55.000 0.00 0.00 0.00 5.03
2323 2361 0.250684 TTGGAAGGAGTGCAATGCGA 60.251 50.000 0.00 0.00 31.74 5.10
2324 2362 0.597568 TTTGGAAGGAGTGCAATGCG 59.402 50.000 0.00 0.00 37.41 4.73
2325 2363 2.494870 AGATTTGGAAGGAGTGCAATGC 59.505 45.455 0.00 0.00 37.41 3.56
2326 2364 4.367386 GAGATTTGGAAGGAGTGCAATG 57.633 45.455 0.00 0.00 37.41 2.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.