Multiple sequence alignment - TraesCS6B01G195600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G195600 chr6B 100.000 4458 0 0 1 4458 231357741 231353284 0.000000e+00 8233.0
1 TraesCS6B01G195600 chr6B 84.375 288 41 3 3836 4121 159133392 159133677 3.400000e-71 279.0
2 TraesCS6B01G195600 chr6B 79.287 449 50 19 1 428 56226384 56226810 1.580000e-69 274.0
3 TraesCS6B01G195600 chr6B 81.726 197 30 6 455 648 641468008 641467815 4.620000e-35 159.0
4 TraesCS6B01G195600 chr6B 100.000 31 0 0 4119 4149 231353540 231353510 1.730000e-04 58.4
5 TraesCS6B01G195600 chr6B 100.000 31 0 0 4202 4232 231353623 231353593 1.730000e-04 58.4
6 TraesCS6B01G195600 chr6A 92.562 2998 128 46 681 3633 172120341 172117394 0.000000e+00 4213.0
7 TraesCS6B01G195600 chr6A 86.822 387 41 7 3743 4121 172117224 172116840 1.480000e-114 424.0
8 TraesCS6B01G195600 chr6A 94.656 262 9 4 4201 4458 172116755 172116495 6.950000e-108 401.0
9 TraesCS6B01G195600 chr6A 100.000 31 0 0 4119 4149 172116754 172116724 1.730000e-04 58.4
10 TraesCS6B01G195600 chr6D 94.768 2007 74 19 1642 3633 133214398 133212408 0.000000e+00 3096.0
11 TraesCS6B01G195600 chr6D 90.573 785 48 10 772 1535 133215190 133214411 0.000000e+00 1016.0
12 TraesCS6B01G195600 chr6D 96.512 258 6 1 4201 4458 133211801 133211547 1.480000e-114 424.0
13 TraesCS6B01G195600 chr6D 85.640 383 44 5 3746 4121 133212274 133211896 4.180000e-105 392.0
14 TraesCS6B01G195600 chr6D 94.828 58 2 1 681 737 133215254 133215197 6.140000e-14 89.8
15 TraesCS6B01G195600 chr7A 84.474 380 43 7 3 379 200723783 200723417 1.180000e-95 361.0
16 TraesCS6B01G195600 chr3B 89.493 276 27 2 3829 4103 495471054 495470780 9.180000e-92 348.0
17 TraesCS6B01G195600 chr4B 84.918 305 36 10 3822 4121 579103348 579103647 2.610000e-77 300.0
18 TraesCS6B01G195600 chr4B 84.775 289 35 9 3837 4121 579390544 579390827 9.440000e-72 281.0
19 TraesCS6B01G195600 chr3A 84.775 289 36 6 3838 4121 645405806 645406091 2.620000e-72 283.0
20 TraesCS6B01G195600 chr4D 84.536 291 36 9 3835 4121 477914186 477914471 3.400000e-71 279.0
21 TraesCS6B01G195600 chr4D 82.143 196 29 5 455 647 451678535 451678727 3.570000e-36 163.0
22 TraesCS6B01G195600 chr4A 83.498 303 42 8 3824 4121 21844253 21844552 4.390000e-70 276.0
23 TraesCS6B01G195600 chr2D 83.691 233 33 5 431 661 634563771 634563542 9.710000e-52 215.0
24 TraesCS6B01G195600 chr2D 84.211 209 31 2 453 661 59155064 59154858 7.560000e-48 202.0
25 TraesCS6B01G195600 chrUn 81.726 197 32 3 466 661 103238373 103238180 1.280000e-35 161.0
26 TraesCS6B01G195600 chr3D 80.861 209 32 6 456 661 308802621 308802418 1.660000e-34 158.0
27 TraesCS6B01G195600 chr3D 82.486 177 28 2 464 639 550515080 550514906 7.720000e-33 152.0
28 TraesCS6B01G195600 chr7D 80.976 205 32 6 431 633 531993590 531993391 5.970000e-34 156.0
29 TraesCS6B01G195600 chr1B 79.902 204 36 5 455 656 571152274 571152074 1.290000e-30 145.0
30 TraesCS6B01G195600 chr2A 83.544 158 17 5 46 194 777962770 777962613 6.010000e-29 139.0
31 TraesCS6B01G195600 chr1D 77.564 156 16 8 290 428 415669943 415669790 4.780000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G195600 chr6B 231353284 231357741 4457 True 8233.00 8233 100.0000 1 4458 1 chr6B.!!$R1 4457
1 TraesCS6B01G195600 chr6A 172116495 172120341 3846 True 1274.10 4213 93.5100 681 4458 4 chr6A.!!$R1 3777
2 TraesCS6B01G195600 chr6D 133211547 133215254 3707 True 1003.56 3096 92.4642 681 4458 5 chr6D.!!$R1 3777

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
56 57 0.032678 ATGGACGCGAGGATGTCATC 59.967 55.000 15.93 4.06 36.83 2.92 F
283 284 0.038159 AAGGAGGAGACAAAGCGACG 60.038 55.000 0.00 0.00 0.00 5.12 F
648 649 0.039888 GGCCGAGAGTCGCTAATCTC 60.040 60.000 5.67 5.67 38.82 2.75 F
938 945 0.107459 GAGGTTGTCTCCATCCAGCC 60.107 60.000 0.00 0.00 36.52 4.85 F
1283 1306 1.141019 GCTTCGTCGTAGGATGGCA 59.859 57.895 4.87 0.00 0.00 4.92 F
1325 1351 1.464608 CACATACGCCAACTCTGTTGG 59.535 52.381 21.25 21.25 42.37 3.77 F
1332 1358 1.502231 CCAACTCTGTTGGTCAGACG 58.498 55.000 18.32 0.00 46.77 4.18 F
2383 2427 1.876156 CCACTTTGAGAGCACCACTTC 59.124 52.381 0.00 0.00 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1266 1289 0.172578 TGTGCCATCCTACGACGAAG 59.827 55.000 0.00 0.00 0.00 3.79 R
1306 1332 1.071699 ACCAACAGAGTTGGCGTATGT 59.928 47.619 24.56 5.42 43.23 2.29 R
1491 1517 1.381735 GGGGCCCCTTTTCATGAGG 60.382 63.158 35.49 0.00 0.00 3.86 R
2050 2090 1.414158 CTGACCGACCCATGGATAGT 58.586 55.000 15.22 1.74 0.00 2.12 R
2404 2448 2.039746 TGTGATTCCCCCAACTGTACAG 59.960 50.000 21.44 21.44 0.00 2.74 R
2678 2722 3.005554 ACAATTGCTTCTGATCCTGACG 58.994 45.455 5.05 0.00 0.00 4.35 R
3282 3331 3.046390 GCGTGGAGATTATCGAACTGAG 58.954 50.000 0.00 0.00 0.00 3.35 R
3750 3871 0.185901 TTGGCTTCCTCACCTTTGCT 59.814 50.000 0.00 0.00 0.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.154347 GAGGCTGCTCACCTCGGG 62.154 72.222 0.00 0.00 44.10 5.14
19 20 3.075005 GGCTGCTCACCTCGGGTA 61.075 66.667 0.00 0.00 32.11 3.69
20 21 2.496817 GCTGCTCACCTCGGGTAG 59.503 66.667 0.00 0.00 32.11 3.18
21 22 2.352032 GCTGCTCACCTCGGGTAGT 61.352 63.158 0.00 0.00 32.11 2.73
22 23 1.889530 GCTGCTCACCTCGGGTAGTT 61.890 60.000 0.00 0.00 32.11 2.24
23 24 0.173708 CTGCTCACCTCGGGTAGTTC 59.826 60.000 0.00 0.00 32.11 3.01
24 25 0.251653 TGCTCACCTCGGGTAGTTCT 60.252 55.000 0.00 0.00 32.11 3.01
25 26 0.896226 GCTCACCTCGGGTAGTTCTT 59.104 55.000 0.00 0.00 32.11 2.52
26 27 1.135053 GCTCACCTCGGGTAGTTCTTC 60.135 57.143 0.00 0.00 32.11 2.87
27 28 1.477295 CTCACCTCGGGTAGTTCTTCC 59.523 57.143 0.00 0.00 32.11 3.46
28 29 0.535797 CACCTCGGGTAGTTCTTCCC 59.464 60.000 4.70 4.70 40.26 3.97
46 47 4.451150 GGAGGTGCATGGACGCGA 62.451 66.667 15.93 0.00 33.35 5.87
47 48 2.887568 GAGGTGCATGGACGCGAG 60.888 66.667 15.93 0.00 33.35 5.03
48 49 4.457496 AGGTGCATGGACGCGAGG 62.457 66.667 15.93 0.00 33.35 4.63
49 50 4.451150 GGTGCATGGACGCGAGGA 62.451 66.667 15.93 0.00 33.35 3.71
50 51 2.202932 GTGCATGGACGCGAGGAT 60.203 61.111 15.93 0.00 33.35 3.24
51 52 2.202919 TGCATGGACGCGAGGATG 60.203 61.111 15.93 12.23 33.35 3.51
52 53 2.202932 GCATGGACGCGAGGATGT 60.203 61.111 15.93 0.00 0.00 3.06
53 54 2.240500 GCATGGACGCGAGGATGTC 61.241 63.158 15.93 0.00 0.00 3.06
54 55 1.141665 CATGGACGCGAGGATGTCA 59.858 57.895 15.93 0.00 36.83 3.58
55 56 0.249615 CATGGACGCGAGGATGTCAT 60.250 55.000 15.93 2.50 36.83 3.06
56 57 0.032678 ATGGACGCGAGGATGTCATC 59.967 55.000 15.93 4.06 36.83 2.92
64 65 2.507944 GGATGTCATCCCGCTGCT 59.492 61.111 19.82 0.00 43.88 4.24
65 66 1.596477 GGATGTCATCCCGCTGCTC 60.596 63.158 19.82 0.00 43.88 4.26
66 67 1.596477 GATGTCATCCCGCTGCTCC 60.596 63.158 0.90 0.00 0.00 4.70
67 68 2.037620 GATGTCATCCCGCTGCTCCT 62.038 60.000 0.90 0.00 0.00 3.69
68 69 2.037620 ATGTCATCCCGCTGCTCCTC 62.038 60.000 0.00 0.00 0.00 3.71
69 70 3.157252 TCATCCCGCTGCTCCTCC 61.157 66.667 0.00 0.00 0.00 4.30
70 71 3.473647 CATCCCGCTGCTCCTCCA 61.474 66.667 0.00 0.00 0.00 3.86
71 72 3.160047 ATCCCGCTGCTCCTCCAG 61.160 66.667 0.00 0.00 35.93 3.86
116 117 3.474570 GCTGCTCCTCCCGGTGAT 61.475 66.667 0.00 0.00 0.00 3.06
117 118 2.503061 CTGCTCCTCCCGGTGATG 59.497 66.667 0.00 0.00 0.00 3.07
118 119 2.038813 TGCTCCTCCCGGTGATGA 59.961 61.111 0.00 0.00 0.00 2.92
119 120 2.303549 CTGCTCCTCCCGGTGATGAC 62.304 65.000 0.00 0.00 0.00 3.06
120 121 3.095347 GCTCCTCCCGGTGATGACC 62.095 68.421 0.00 0.00 39.14 4.02
121 122 1.685765 CTCCTCCCGGTGATGACCA 60.686 63.158 1.19 0.00 43.33 4.02
122 123 1.961180 CTCCTCCCGGTGATGACCAC 61.961 65.000 1.19 0.00 43.33 4.16
123 124 2.184322 CTCCCGGTGATGACCACG 59.816 66.667 1.19 0.00 46.62 4.94
124 125 4.077184 TCCCGGTGATGACCACGC 62.077 66.667 1.19 0.00 46.62 5.34
125 126 4.386951 CCCGGTGATGACCACGCA 62.387 66.667 1.19 0.00 46.62 5.24
126 127 2.358125 CCGGTGATGACCACGCAA 60.358 61.111 1.19 0.00 46.62 4.85
127 128 1.745115 CCGGTGATGACCACGCAAT 60.745 57.895 1.19 0.00 46.62 3.56
128 129 1.425031 CGGTGATGACCACGCAATG 59.575 57.895 1.19 0.00 46.62 2.82
137 138 3.895025 CACGCAATGGAGGAGTGG 58.105 61.111 0.00 0.00 33.22 4.00
138 139 2.045926 ACGCAATGGAGGAGTGGC 60.046 61.111 0.00 0.00 0.00 5.01
139 140 3.197790 CGCAATGGAGGAGTGGCG 61.198 66.667 0.00 0.00 38.45 5.69
140 141 2.825836 GCAATGGAGGAGTGGCGG 60.826 66.667 0.00 0.00 0.00 6.13
141 142 2.124570 CAATGGAGGAGTGGCGGG 60.125 66.667 0.00 0.00 0.00 6.13
142 143 3.411517 AATGGAGGAGTGGCGGGG 61.412 66.667 0.00 0.00 0.00 5.73
143 144 3.943137 AATGGAGGAGTGGCGGGGA 62.943 63.158 0.00 0.00 0.00 4.81
155 156 3.801997 CGGGGAGCTCCTGCCAAT 61.802 66.667 31.36 0.00 44.05 3.16
156 157 2.443394 CGGGGAGCTCCTGCCAATA 61.443 63.158 31.36 0.00 44.05 1.90
157 158 1.772819 CGGGGAGCTCCTGCCAATAT 61.773 60.000 31.36 0.00 44.05 1.28
158 159 0.251077 GGGGAGCTCCTGCCAATATG 60.251 60.000 31.36 0.00 44.05 1.78
159 160 0.475906 GGGAGCTCCTGCCAATATGT 59.524 55.000 31.36 0.00 41.77 2.29
160 161 1.602311 GGAGCTCCTGCCAATATGTG 58.398 55.000 26.25 0.00 40.80 3.21
161 162 1.141657 GGAGCTCCTGCCAATATGTGA 59.858 52.381 26.25 0.00 40.80 3.58
162 163 2.224719 GGAGCTCCTGCCAATATGTGAT 60.225 50.000 26.25 0.00 40.80 3.06
163 164 2.812591 GAGCTCCTGCCAATATGTGATG 59.187 50.000 0.87 0.00 40.80 3.07
164 165 2.174210 AGCTCCTGCCAATATGTGATGT 59.826 45.455 0.00 0.00 40.80 3.06
165 166 2.954318 GCTCCTGCCAATATGTGATGTT 59.046 45.455 0.00 0.00 0.00 2.71
166 167 3.243301 GCTCCTGCCAATATGTGATGTTG 60.243 47.826 0.00 0.00 0.00 3.33
172 173 3.614159 CAATATGTGATGTTGGAGGCG 57.386 47.619 0.00 0.00 0.00 5.52
173 174 2.260844 ATATGTGATGTTGGAGGCGG 57.739 50.000 0.00 0.00 0.00 6.13
174 175 0.463654 TATGTGATGTTGGAGGCGGC 60.464 55.000 0.00 0.00 0.00 6.53
175 176 3.134127 GTGATGTTGGAGGCGGCC 61.134 66.667 12.11 12.11 0.00 6.13
176 177 3.645660 TGATGTTGGAGGCGGCCA 61.646 61.111 23.09 0.00 35.78 5.36
177 178 2.124151 GATGTTGGAGGCGGCCAT 60.124 61.111 23.09 4.13 37.86 4.40
178 179 1.148273 GATGTTGGAGGCGGCCATA 59.852 57.895 23.09 3.57 37.86 2.74
179 180 0.886490 GATGTTGGAGGCGGCCATAG 60.886 60.000 23.09 0.00 37.86 2.23
180 181 2.902343 GTTGGAGGCGGCCATAGC 60.902 66.667 23.09 7.21 37.86 2.97
181 182 3.089874 TTGGAGGCGGCCATAGCT 61.090 61.111 23.09 0.00 37.86 3.32
189 190 4.256180 GGCCATAGCTGACCGGGG 62.256 72.222 6.32 0.00 39.73 5.73
190 191 4.256180 GCCATAGCTGACCGGGGG 62.256 72.222 6.32 0.00 35.50 5.40
191 192 4.256180 CCATAGCTGACCGGGGGC 62.256 72.222 6.32 6.95 0.00 5.80
192 193 4.609018 CATAGCTGACCGGGGGCG 62.609 72.222 6.32 0.00 0.00 6.13
206 207 4.347865 GGCGGAGACCTCTCTCTT 57.652 61.111 2.37 0.00 42.55 2.85
207 208 2.585876 GGCGGAGACCTCTCTCTTT 58.414 57.895 2.37 0.00 42.55 2.52
208 209 0.458260 GGCGGAGACCTCTCTCTTTC 59.542 60.000 2.37 0.00 42.55 2.62
209 210 1.470051 GCGGAGACCTCTCTCTTTCT 58.530 55.000 2.37 0.00 42.55 2.52
210 211 1.404035 GCGGAGACCTCTCTCTTTCTC 59.596 57.143 2.37 0.00 42.55 2.87
211 212 2.944094 GCGGAGACCTCTCTCTTTCTCT 60.944 54.545 2.37 0.00 42.55 3.10
212 213 2.943033 CGGAGACCTCTCTCTTTCTCTC 59.057 54.545 2.37 0.00 42.55 3.20
213 214 2.943033 GGAGACCTCTCTCTTTCTCTCG 59.057 54.545 2.37 0.00 42.55 4.04
214 215 3.606687 GAGACCTCTCTCTTTCTCTCGT 58.393 50.000 0.00 0.00 40.09 4.18
215 216 3.343617 AGACCTCTCTCTTTCTCTCGTG 58.656 50.000 0.00 0.00 0.00 4.35
216 217 3.008594 AGACCTCTCTCTTTCTCTCGTGA 59.991 47.826 0.00 0.00 0.00 4.35
217 218 3.343617 ACCTCTCTCTTTCTCTCGTGAG 58.656 50.000 8.20 8.20 41.51 3.51
218 219 2.682856 CCTCTCTCTTTCTCTCGTGAGG 59.317 54.545 14.12 0.00 40.58 3.86
219 220 2.682856 CTCTCTCTTTCTCTCGTGAGGG 59.317 54.545 14.12 5.85 40.58 4.30
220 221 1.134175 CTCTCTTTCTCTCGTGAGGGC 59.866 57.143 14.12 0.00 40.58 5.19
221 222 0.174617 CTCTTTCTCTCGTGAGGGCC 59.825 60.000 14.12 0.00 40.58 5.80
222 223 1.153745 CTTTCTCTCGTGAGGGCCG 60.154 63.158 14.12 0.00 40.58 6.13
223 224 1.595993 CTTTCTCTCGTGAGGGCCGA 61.596 60.000 14.12 0.00 40.58 5.54
224 225 1.874345 TTTCTCTCGTGAGGGCCGAC 61.874 60.000 14.12 0.00 40.58 4.79
225 226 4.180946 CTCTCGTGAGGGCCGACG 62.181 72.222 20.96 20.96 36.70 5.12
226 227 4.710167 TCTCGTGAGGGCCGACGA 62.710 66.667 25.65 25.65 42.10 4.20
227 228 4.477975 CTCGTGAGGGCCGACGAC 62.478 72.222 24.26 8.17 39.59 4.34
230 231 4.477975 GTGAGGGCCGACGACGAG 62.478 72.222 9.28 0.00 42.66 4.18
253 254 3.710926 CTCCTCCTGCTGAGCACT 58.289 61.111 1.40 0.00 39.98 4.40
254 255 1.218585 CTCCTCCTGCTGAGCACTG 59.781 63.158 1.40 0.00 39.98 3.66
255 256 1.228988 TCCTCCTGCTGAGCACTGA 60.229 57.895 1.40 2.04 39.98 3.41
256 257 0.616964 TCCTCCTGCTGAGCACTGAT 60.617 55.000 1.40 0.00 39.98 2.90
257 258 0.462225 CCTCCTGCTGAGCACTGATG 60.462 60.000 1.40 0.00 39.98 3.07
258 259 0.462225 CTCCTGCTGAGCACTGATGG 60.462 60.000 1.40 2.65 33.79 3.51
259 260 1.451567 CCTGCTGAGCACTGATGGG 60.452 63.158 1.40 0.00 33.79 4.00
260 261 2.045634 TGCTGAGCACTGATGGGC 60.046 61.111 1.40 0.00 31.71 5.36
261 262 3.200593 GCTGAGCACTGATGGGCG 61.201 66.667 0.00 0.00 34.54 6.13
262 263 2.513204 CTGAGCACTGATGGGCGG 60.513 66.667 0.00 0.00 34.54 6.13
263 264 4.100084 TGAGCACTGATGGGCGGG 62.100 66.667 0.00 0.00 34.54 6.13
264 265 3.785859 GAGCACTGATGGGCGGGA 61.786 66.667 0.00 0.00 34.54 5.14
265 266 3.329542 GAGCACTGATGGGCGGGAA 62.330 63.158 0.00 0.00 34.54 3.97
266 267 2.825836 GCACTGATGGGCGGGAAG 60.826 66.667 0.00 0.00 0.00 3.46
267 268 2.124570 CACTGATGGGCGGGAAGG 60.125 66.667 0.00 0.00 0.00 3.46
268 269 2.285368 ACTGATGGGCGGGAAGGA 60.285 61.111 0.00 0.00 0.00 3.36
269 270 2.370445 ACTGATGGGCGGGAAGGAG 61.370 63.158 0.00 0.00 0.00 3.69
270 271 3.089874 TGATGGGCGGGAAGGAGG 61.090 66.667 0.00 0.00 0.00 4.30
271 272 2.768344 GATGGGCGGGAAGGAGGA 60.768 66.667 0.00 0.00 0.00 3.71
272 273 2.770048 ATGGGCGGGAAGGAGGAG 60.770 66.667 0.00 0.00 0.00 3.69
273 274 3.332393 ATGGGCGGGAAGGAGGAGA 62.332 63.158 0.00 0.00 0.00 3.71
274 275 3.471806 GGGCGGGAAGGAGGAGAC 61.472 72.222 0.00 0.00 0.00 3.36
275 276 2.683933 GGCGGGAAGGAGGAGACA 60.684 66.667 0.00 0.00 0.00 3.41
276 277 2.291043 GGCGGGAAGGAGGAGACAA 61.291 63.158 0.00 0.00 0.00 3.18
277 278 1.677552 GCGGGAAGGAGGAGACAAA 59.322 57.895 0.00 0.00 0.00 2.83
278 279 0.391793 GCGGGAAGGAGGAGACAAAG 60.392 60.000 0.00 0.00 0.00 2.77
279 280 0.391793 CGGGAAGGAGGAGACAAAGC 60.392 60.000 0.00 0.00 0.00 3.51
280 281 0.391793 GGGAAGGAGGAGACAAAGCG 60.392 60.000 0.00 0.00 0.00 4.68
281 282 0.608640 GGAAGGAGGAGACAAAGCGA 59.391 55.000 0.00 0.00 0.00 4.93
282 283 1.673329 GGAAGGAGGAGACAAAGCGAC 60.673 57.143 0.00 0.00 0.00 5.19
283 284 0.038159 AAGGAGGAGACAAAGCGACG 60.038 55.000 0.00 0.00 0.00 5.12
284 285 1.446272 GGAGGAGACAAAGCGACGG 60.446 63.158 0.00 0.00 0.00 4.79
285 286 1.446272 GAGGAGACAAAGCGACGGG 60.446 63.158 0.00 0.00 0.00 5.28
286 287 2.156051 GAGGAGACAAAGCGACGGGT 62.156 60.000 0.00 0.00 0.00 5.28
287 288 2.027625 GGAGACAAAGCGACGGGTG 61.028 63.158 0.00 0.00 0.00 4.61
288 289 2.665185 AGACAAAGCGACGGGTGC 60.665 61.111 0.00 0.00 0.00 5.01
289 290 4.072088 GACAAAGCGACGGGTGCG 62.072 66.667 0.00 0.00 37.44 5.34
290 291 4.595538 ACAAAGCGACGGGTGCGA 62.596 61.111 0.00 0.00 37.44 5.10
291 292 3.777925 CAAAGCGACGGGTGCGAG 61.778 66.667 0.00 0.00 37.44 5.03
301 302 4.899239 GGTGCGAGGCCGAGGATG 62.899 72.222 0.00 0.00 38.22 3.51
302 303 4.899239 GTGCGAGGCCGAGGATGG 62.899 72.222 0.00 0.00 38.22 3.51
306 307 3.237741 GAGGCCGAGGATGGGGAG 61.238 72.222 0.00 0.00 32.83 4.30
309 310 4.247380 GCCGAGGATGGGGAGCAG 62.247 72.222 0.00 0.00 32.83 4.24
310 311 3.554342 CCGAGGATGGGGAGCAGG 61.554 72.222 0.00 0.00 0.00 4.85
311 312 3.554342 CGAGGATGGGGAGCAGGG 61.554 72.222 0.00 0.00 0.00 4.45
312 313 3.883549 GAGGATGGGGAGCAGGGC 61.884 72.222 0.00 0.00 0.00 5.19
315 316 4.247380 GATGGGGAGCAGGGCGAG 62.247 72.222 0.00 0.00 0.00 5.03
319 320 4.496336 GGGAGCAGGGCGAGCAAT 62.496 66.667 2.67 0.00 0.00 3.56
320 321 3.207669 GGAGCAGGGCGAGCAATG 61.208 66.667 2.67 0.00 0.00 2.82
321 322 3.207669 GAGCAGGGCGAGCAATGG 61.208 66.667 2.67 0.00 0.00 3.16
343 344 4.715130 CCGTGGGGGAGGACAGGA 62.715 72.222 0.00 0.00 38.47 3.86
344 345 3.077556 CGTGGGGGAGGACAGGAG 61.078 72.222 0.00 0.00 0.00 3.69
345 346 3.403558 GTGGGGGAGGACAGGAGC 61.404 72.222 0.00 0.00 0.00 4.70
373 374 3.461773 CGCGACCAGGGAGGACAT 61.462 66.667 0.00 0.00 41.22 3.06
374 375 2.187946 GCGACCAGGGAGGACATG 59.812 66.667 0.00 0.00 41.22 3.21
375 376 2.359169 GCGACCAGGGAGGACATGA 61.359 63.158 0.00 0.00 41.22 3.07
376 377 1.819229 CGACCAGGGAGGACATGAG 59.181 63.158 0.00 0.00 41.22 2.90
377 378 1.524482 GACCAGGGAGGACATGAGC 59.476 63.158 0.00 0.00 41.22 4.26
378 379 2.303549 GACCAGGGAGGACATGAGCG 62.304 65.000 0.00 0.00 41.22 5.03
379 380 2.060383 CCAGGGAGGACATGAGCGA 61.060 63.158 0.00 0.00 41.22 4.93
380 381 1.617018 CCAGGGAGGACATGAGCGAA 61.617 60.000 0.00 0.00 41.22 4.70
381 382 0.179089 CAGGGAGGACATGAGCGAAG 60.179 60.000 0.00 0.00 0.00 3.79
382 383 1.144936 GGGAGGACATGAGCGAAGG 59.855 63.158 0.00 0.00 0.00 3.46
383 384 1.330655 GGGAGGACATGAGCGAAGGA 61.331 60.000 0.00 0.00 0.00 3.36
384 385 0.103937 GGAGGACATGAGCGAAGGAG 59.896 60.000 0.00 0.00 0.00 3.69
385 386 1.107114 GAGGACATGAGCGAAGGAGA 58.893 55.000 0.00 0.00 0.00 3.71
386 387 1.066908 GAGGACATGAGCGAAGGAGAG 59.933 57.143 0.00 0.00 0.00 3.20
387 388 0.103937 GGACATGAGCGAAGGAGAGG 59.896 60.000 0.00 0.00 0.00 3.69
388 389 0.103937 GACATGAGCGAAGGAGAGGG 59.896 60.000 0.00 0.00 0.00 4.30
389 390 1.333636 ACATGAGCGAAGGAGAGGGG 61.334 60.000 0.00 0.00 0.00 4.79
390 391 2.439104 ATGAGCGAAGGAGAGGGGC 61.439 63.158 0.00 0.00 0.00 5.80
391 392 4.214327 GAGCGAAGGAGAGGGGCG 62.214 72.222 0.00 0.00 0.00 6.13
394 395 4.082523 CGAAGGAGAGGGGCGCAA 62.083 66.667 10.83 0.00 0.00 4.85
395 396 2.124942 GAAGGAGAGGGGCGCAAG 60.125 66.667 10.83 0.00 43.44 4.01
396 397 2.930562 AAGGAGAGGGGCGCAAGT 60.931 61.111 10.83 0.00 41.68 3.16
397 398 3.259633 AAGGAGAGGGGCGCAAGTG 62.260 63.158 10.83 0.00 41.68 3.16
398 399 4.785453 GGAGAGGGGCGCAAGTGG 62.785 72.222 10.83 0.00 41.68 4.00
399 400 4.785453 GAGAGGGGCGCAAGTGGG 62.785 72.222 10.83 0.00 41.68 4.61
401 402 4.785453 GAGGGGCGCAAGTGGGAG 62.785 72.222 10.83 0.00 41.68 4.30
405 406 4.329545 GGCGCAAGTGGGAGTGGA 62.330 66.667 10.83 0.00 41.68 4.02
406 407 2.743928 GCGCAAGTGGGAGTGGAG 60.744 66.667 0.30 0.00 41.68 3.86
407 408 2.046892 CGCAAGTGGGAGTGGAGG 60.047 66.667 0.00 0.00 0.00 4.30
408 409 2.360475 GCAAGTGGGAGTGGAGGC 60.360 66.667 0.00 0.00 0.00 4.70
409 410 2.900106 GCAAGTGGGAGTGGAGGCT 61.900 63.158 0.00 0.00 0.00 4.58
410 411 1.553690 GCAAGTGGGAGTGGAGGCTA 61.554 60.000 0.00 0.00 0.00 3.93
411 412 0.539051 CAAGTGGGAGTGGAGGCTAG 59.461 60.000 0.00 0.00 0.00 3.42
412 413 0.618968 AAGTGGGAGTGGAGGCTAGG 60.619 60.000 0.00 0.00 0.00 3.02
413 414 2.066999 GTGGGAGTGGAGGCTAGGG 61.067 68.421 0.00 0.00 0.00 3.53
414 415 2.369001 GGGAGTGGAGGCTAGGGT 59.631 66.667 0.00 0.00 0.00 4.34
415 416 1.307084 GGGAGTGGAGGCTAGGGTT 60.307 63.158 0.00 0.00 0.00 4.11
416 417 1.338890 GGGAGTGGAGGCTAGGGTTC 61.339 65.000 0.00 0.00 0.00 3.62
417 418 0.325765 GGAGTGGAGGCTAGGGTTCT 60.326 60.000 0.00 0.00 0.00 3.01
418 419 0.827368 GAGTGGAGGCTAGGGTTCTG 59.173 60.000 0.00 0.00 0.00 3.02
419 420 0.413832 AGTGGAGGCTAGGGTTCTGA 59.586 55.000 0.00 0.00 0.00 3.27
420 421 1.203313 AGTGGAGGCTAGGGTTCTGAA 60.203 52.381 0.00 0.00 0.00 3.02
421 422 1.066071 GTGGAGGCTAGGGTTCTGAAC 60.066 57.143 12.05 12.05 0.00 3.18
434 435 4.859629 GTTCTGAACCAATCGATACCAC 57.140 45.455 9.38 0.00 0.00 4.16
435 436 3.159353 TCTGAACCAATCGATACCACG 57.841 47.619 0.00 0.00 0.00 4.94
436 437 1.593006 CTGAACCAATCGATACCACGC 59.407 52.381 0.00 0.00 0.00 5.34
437 438 0.935196 GAACCAATCGATACCACGCC 59.065 55.000 0.00 0.00 0.00 5.68
438 439 0.250793 AACCAATCGATACCACGCCA 59.749 50.000 0.00 0.00 0.00 5.69
439 440 0.461339 ACCAATCGATACCACGCCAC 60.461 55.000 0.00 0.00 0.00 5.01
440 441 0.461163 CCAATCGATACCACGCCACA 60.461 55.000 0.00 0.00 0.00 4.17
441 442 0.650512 CAATCGATACCACGCCACAC 59.349 55.000 0.00 0.00 0.00 3.82
442 443 0.248012 AATCGATACCACGCCACACA 59.752 50.000 0.00 0.00 0.00 3.72
443 444 0.459585 ATCGATACCACGCCACACAC 60.460 55.000 0.00 0.00 0.00 3.82
444 445 1.373622 CGATACCACGCCACACACA 60.374 57.895 0.00 0.00 0.00 3.72
445 446 0.946700 CGATACCACGCCACACACAA 60.947 55.000 0.00 0.00 0.00 3.33
446 447 1.448985 GATACCACGCCACACACAAT 58.551 50.000 0.00 0.00 0.00 2.71
447 448 1.396996 GATACCACGCCACACACAATC 59.603 52.381 0.00 0.00 0.00 2.67
448 449 0.106894 TACCACGCCACACACAATCA 59.893 50.000 0.00 0.00 0.00 2.57
449 450 1.282570 CCACGCCACACACAATCAC 59.717 57.895 0.00 0.00 0.00 3.06
450 451 1.443322 CCACGCCACACACAATCACA 61.443 55.000 0.00 0.00 0.00 3.58
451 452 0.316937 CACGCCACACACAATCACAC 60.317 55.000 0.00 0.00 0.00 3.82
452 453 0.746204 ACGCCACACACAATCACACA 60.746 50.000 0.00 0.00 0.00 3.72
453 454 0.316937 CGCCACACACAATCACACAC 60.317 55.000 0.00 0.00 0.00 3.82
454 455 0.316937 GCCACACACAATCACACACG 60.317 55.000 0.00 0.00 0.00 4.49
455 456 1.013596 CCACACACAATCACACACGT 58.986 50.000 0.00 0.00 0.00 4.49
456 457 1.267982 CCACACACAATCACACACGTG 60.268 52.381 15.48 15.48 45.08 4.49
467 468 3.377434 CACACACGTGAAAAGACGAAA 57.623 42.857 25.01 0.00 46.80 3.46
468 469 3.738399 CACACACGTGAAAAGACGAAAA 58.262 40.909 25.01 0.00 46.80 2.29
469 470 4.339429 CACACACGTGAAAAGACGAAAAT 58.661 39.130 25.01 0.00 46.80 1.82
470 471 4.202158 CACACACGTGAAAAGACGAAAATG 59.798 41.667 25.01 7.50 46.80 2.32
471 472 3.177643 CACACGTGAAAAGACGAAAATGC 59.822 43.478 25.01 0.00 42.10 3.56
472 473 2.719046 CACGTGAAAAGACGAAAATGCC 59.281 45.455 10.90 0.00 42.10 4.40
473 474 2.287368 ACGTGAAAAGACGAAAATGCCC 60.287 45.455 0.00 0.00 42.10 5.36
474 475 2.031157 CGTGAAAAGACGAAAATGCCCT 60.031 45.455 0.00 0.00 42.10 5.19
475 476 3.565516 GTGAAAAGACGAAAATGCCCTC 58.434 45.455 0.00 0.00 0.00 4.30
476 477 2.225491 TGAAAAGACGAAAATGCCCTCG 59.775 45.455 0.00 0.00 40.87 4.63
477 478 1.165270 AAAGACGAAAATGCCCTCGG 58.835 50.000 0.00 0.00 39.38 4.63
496 497 4.120085 GGGGCACGAGAATAACGG 57.880 61.111 0.00 0.00 34.93 4.44
497 498 2.178235 GGGGCACGAGAATAACGGC 61.178 63.158 0.00 0.00 34.93 5.68
498 499 2.522638 GGGCACGAGAATAACGGCG 61.523 63.158 4.80 4.80 34.93 6.46
499 500 2.522638 GGCACGAGAATAACGGCGG 61.523 63.158 13.24 0.00 34.93 6.13
500 501 1.808390 GCACGAGAATAACGGCGGT 60.808 57.895 13.24 7.51 34.93 5.68
501 502 1.995991 CACGAGAATAACGGCGGTG 59.004 57.895 8.19 0.16 34.93 4.94
502 503 1.153706 ACGAGAATAACGGCGGTGG 60.154 57.895 8.19 0.00 34.93 4.61
503 504 2.522638 CGAGAATAACGGCGGTGGC 61.523 63.158 8.19 0.00 38.90 5.01
504 505 1.448893 GAGAATAACGGCGGTGGCA 60.449 57.895 8.19 0.00 42.47 4.92
505 506 1.702491 GAGAATAACGGCGGTGGCAC 61.702 60.000 8.19 9.70 42.47 5.01
506 507 3.090960 GAATAACGGCGGTGGCACG 62.091 63.158 8.19 8.28 42.47 5.34
507 508 3.592856 AATAACGGCGGTGGCACGA 62.593 57.895 8.19 0.00 42.47 4.35
508 509 4.728102 TAACGGCGGTGGCACGAG 62.728 66.667 8.19 9.42 42.47 4.18
512 513 4.148825 GGCGGTGGCACGAGATCT 62.149 66.667 12.17 0.00 42.47 2.75
513 514 2.125512 GCGGTGGCACGAGATCTT 60.126 61.111 12.17 0.00 39.62 2.40
514 515 1.741770 GCGGTGGCACGAGATCTTT 60.742 57.895 12.17 0.00 39.62 2.52
515 516 0.459585 GCGGTGGCACGAGATCTTTA 60.460 55.000 12.17 0.00 39.62 1.85
516 517 1.278238 CGGTGGCACGAGATCTTTAC 58.722 55.000 12.17 0.00 35.47 2.01
517 518 1.403647 CGGTGGCACGAGATCTTTACA 60.404 52.381 12.17 0.00 35.47 2.41
518 519 2.738643 CGGTGGCACGAGATCTTTACAT 60.739 50.000 12.17 0.00 35.47 2.29
519 520 2.866762 GGTGGCACGAGATCTTTACATC 59.133 50.000 12.17 0.00 0.00 3.06
520 521 2.535984 GTGGCACGAGATCTTTACATCG 59.464 50.000 0.00 0.00 40.86 3.84
521 522 2.128035 GGCACGAGATCTTTACATCGG 58.872 52.381 0.00 0.00 39.42 4.18
522 523 2.128035 GCACGAGATCTTTACATCGGG 58.872 52.381 0.00 0.00 41.41 5.14
523 524 2.743938 CACGAGATCTTTACATCGGGG 58.256 52.381 0.00 0.00 39.42 5.73
524 525 1.687123 ACGAGATCTTTACATCGGGGG 59.313 52.381 0.00 0.00 39.42 5.40
541 542 1.893137 GGGGGTGAAACTGTTCATTCC 59.107 52.381 0.00 1.41 45.38 3.01
542 543 2.490902 GGGGGTGAAACTGTTCATTCCT 60.491 50.000 0.00 0.00 45.38 3.36
543 544 3.230976 GGGGTGAAACTGTTCATTCCTT 58.769 45.455 0.00 0.00 45.38 3.36
544 545 3.641436 GGGGTGAAACTGTTCATTCCTTT 59.359 43.478 0.00 0.00 45.38 3.11
545 546 4.830600 GGGGTGAAACTGTTCATTCCTTTA 59.169 41.667 0.00 0.00 45.38 1.85
546 547 5.048013 GGGGTGAAACTGTTCATTCCTTTAG 60.048 44.000 0.00 0.00 45.38 1.85
547 548 5.535030 GGGTGAAACTGTTCATTCCTTTAGT 59.465 40.000 0.00 0.00 45.38 2.24
548 549 6.438763 GGTGAAACTGTTCATTCCTTTAGTG 58.561 40.000 0.00 0.00 45.38 2.74
549 550 6.039382 GGTGAAACTGTTCATTCCTTTAGTGT 59.961 38.462 0.00 0.00 45.38 3.55
550 551 7.132863 GTGAAACTGTTCATTCCTTTAGTGTC 58.867 38.462 0.00 0.00 45.38 3.67
551 552 7.012421 GTGAAACTGTTCATTCCTTTAGTGTCT 59.988 37.037 0.00 0.00 45.38 3.41
552 553 7.226720 TGAAACTGTTCATTCCTTTAGTGTCTC 59.773 37.037 0.00 0.00 38.88 3.36
553 554 6.174720 ACTGTTCATTCCTTTAGTGTCTCA 57.825 37.500 0.00 0.00 0.00 3.27
554 555 6.773638 ACTGTTCATTCCTTTAGTGTCTCAT 58.226 36.000 0.00 0.00 0.00 2.90
555 556 6.876257 ACTGTTCATTCCTTTAGTGTCTCATC 59.124 38.462 0.00 0.00 0.00 2.92
556 557 7.009179 TGTTCATTCCTTTAGTGTCTCATCT 57.991 36.000 0.00 0.00 0.00 2.90
557 558 7.453393 TGTTCATTCCTTTAGTGTCTCATCTT 58.547 34.615 0.00 0.00 0.00 2.40
558 559 7.604164 TGTTCATTCCTTTAGTGTCTCATCTTC 59.396 37.037 0.00 0.00 0.00 2.87
559 560 6.333416 TCATTCCTTTAGTGTCTCATCTTCG 58.667 40.000 0.00 0.00 0.00 3.79
560 561 5.977489 TTCCTTTAGTGTCTCATCTTCGA 57.023 39.130 0.00 0.00 0.00 3.71
561 562 6.531503 TTCCTTTAGTGTCTCATCTTCGAT 57.468 37.500 0.00 0.00 0.00 3.59
562 563 6.137794 TCCTTTAGTGTCTCATCTTCGATC 57.862 41.667 0.00 0.00 0.00 3.69
563 564 5.067936 TCCTTTAGTGTCTCATCTTCGATCC 59.932 44.000 0.00 0.00 0.00 3.36
564 565 4.553756 TTAGTGTCTCATCTTCGATCCG 57.446 45.455 0.00 0.00 0.00 4.18
565 566 2.644676 AGTGTCTCATCTTCGATCCGA 58.355 47.619 0.00 0.00 0.00 4.55
566 567 2.356382 AGTGTCTCATCTTCGATCCGAC 59.644 50.000 0.00 0.00 34.89 4.79
567 568 1.330829 TGTCTCATCTTCGATCCGACG 59.669 52.381 0.00 0.00 34.89 5.12
568 569 0.945099 TCTCATCTTCGATCCGACGG 59.055 55.000 7.84 7.84 34.89 4.79
569 570 0.661780 CTCATCTTCGATCCGACGGC 60.662 60.000 9.66 0.00 34.89 5.68
570 571 1.661821 CATCTTCGATCCGACGGCC 60.662 63.158 9.66 2.30 34.89 6.13
571 572 2.857744 ATCTTCGATCCGACGGCCC 61.858 63.158 9.66 1.90 34.89 5.80
572 573 3.833645 CTTCGATCCGACGGCCCA 61.834 66.667 9.66 0.00 34.89 5.36
573 574 3.774959 CTTCGATCCGACGGCCCAG 62.775 68.421 9.66 0.39 34.89 4.45
576 577 4.593864 GATCCGACGGCCCAGCTC 62.594 72.222 9.66 0.00 0.00 4.09
580 581 4.821589 CGACGGCCCAGCTCCTTC 62.822 72.222 0.00 0.00 0.00 3.46
581 582 4.475135 GACGGCCCAGCTCCTTCC 62.475 72.222 0.00 0.00 0.00 3.46
583 584 4.785453 CGGCCCAGCTCCTTCCAC 62.785 72.222 0.00 0.00 0.00 4.02
584 585 4.432741 GGCCCAGCTCCTTCCACC 62.433 72.222 0.00 0.00 0.00 4.61
585 586 3.334054 GCCCAGCTCCTTCCACCT 61.334 66.667 0.00 0.00 0.00 4.00
586 587 2.993853 CCCAGCTCCTTCCACCTC 59.006 66.667 0.00 0.00 0.00 3.85
587 588 1.614824 CCCAGCTCCTTCCACCTCT 60.615 63.158 0.00 0.00 0.00 3.69
588 589 0.325671 CCCAGCTCCTTCCACCTCTA 60.326 60.000 0.00 0.00 0.00 2.43
589 590 1.118838 CCAGCTCCTTCCACCTCTAG 58.881 60.000 0.00 0.00 0.00 2.43
590 591 1.342474 CCAGCTCCTTCCACCTCTAGA 60.342 57.143 0.00 0.00 0.00 2.43
591 592 2.676748 CAGCTCCTTCCACCTCTAGAT 58.323 52.381 0.00 0.00 0.00 1.98
592 593 2.627699 CAGCTCCTTCCACCTCTAGATC 59.372 54.545 0.00 0.00 0.00 2.75
593 594 1.967779 GCTCCTTCCACCTCTAGATCC 59.032 57.143 0.00 0.00 0.00 3.36
594 595 2.235016 CTCCTTCCACCTCTAGATCCG 58.765 57.143 0.00 0.00 0.00 4.18
595 596 1.850998 TCCTTCCACCTCTAGATCCGA 59.149 52.381 0.00 0.00 0.00 4.55
596 597 1.957877 CCTTCCACCTCTAGATCCGAC 59.042 57.143 0.00 0.00 0.00 4.79
597 598 1.604755 CTTCCACCTCTAGATCCGACG 59.395 57.143 0.00 0.00 0.00 5.12
598 599 0.818445 TCCACCTCTAGATCCGACGC 60.818 60.000 0.00 0.00 0.00 5.19
599 600 1.655329 CACCTCTAGATCCGACGCC 59.345 63.158 0.00 0.00 0.00 5.68
600 601 1.528776 ACCTCTAGATCCGACGCCC 60.529 63.158 0.00 0.00 0.00 6.13
601 602 1.528542 CCTCTAGATCCGACGCCCA 60.529 63.158 0.00 0.00 0.00 5.36
602 603 1.519751 CCTCTAGATCCGACGCCCAG 61.520 65.000 0.00 0.00 0.00 4.45
603 604 0.535328 CTCTAGATCCGACGCCCAGA 60.535 60.000 0.00 0.00 0.00 3.86
604 605 0.106868 TCTAGATCCGACGCCCAGAA 60.107 55.000 0.00 0.00 0.00 3.02
605 606 0.962489 CTAGATCCGACGCCCAGAAT 59.038 55.000 0.00 0.00 0.00 2.40
606 607 1.341531 CTAGATCCGACGCCCAGAATT 59.658 52.381 0.00 0.00 0.00 2.17
607 608 0.105039 AGATCCGACGCCCAGAATTC 59.895 55.000 0.00 0.00 0.00 2.17
608 609 0.880718 GATCCGACGCCCAGAATTCC 60.881 60.000 0.65 0.00 0.00 3.01
609 610 1.622607 ATCCGACGCCCAGAATTCCA 61.623 55.000 0.65 0.00 0.00 3.53
610 611 1.153168 CCGACGCCCAGAATTCCAT 60.153 57.895 0.65 0.00 0.00 3.41
611 612 0.748005 CCGACGCCCAGAATTCCATT 60.748 55.000 0.65 0.00 0.00 3.16
612 613 1.474320 CCGACGCCCAGAATTCCATTA 60.474 52.381 0.65 0.00 0.00 1.90
613 614 2.285083 CGACGCCCAGAATTCCATTAA 58.715 47.619 0.65 0.00 0.00 1.40
614 615 2.287915 CGACGCCCAGAATTCCATTAAG 59.712 50.000 0.65 0.00 0.00 1.85
615 616 2.024414 ACGCCCAGAATTCCATTAAGC 58.976 47.619 0.65 0.00 0.00 3.09
616 617 2.023673 CGCCCAGAATTCCATTAAGCA 58.976 47.619 0.65 0.00 0.00 3.91
617 618 2.033801 CGCCCAGAATTCCATTAAGCAG 59.966 50.000 0.65 0.00 0.00 4.24
618 619 3.026694 GCCCAGAATTCCATTAAGCAGT 58.973 45.455 0.65 0.00 0.00 4.40
619 620 3.448660 GCCCAGAATTCCATTAAGCAGTT 59.551 43.478 0.65 0.00 0.00 3.16
620 621 4.440663 GCCCAGAATTCCATTAAGCAGTTC 60.441 45.833 0.65 0.00 0.00 3.01
621 622 4.201950 CCCAGAATTCCATTAAGCAGTTCG 60.202 45.833 0.65 0.00 0.00 3.95
622 623 4.635765 CCAGAATTCCATTAAGCAGTTCGA 59.364 41.667 0.65 0.00 0.00 3.71
623 624 5.297776 CCAGAATTCCATTAAGCAGTTCGAT 59.702 40.000 0.65 0.00 0.00 3.59
624 625 6.425504 CAGAATTCCATTAAGCAGTTCGATC 58.574 40.000 0.65 0.00 0.00 3.69
625 626 6.259608 CAGAATTCCATTAAGCAGTTCGATCT 59.740 38.462 0.65 0.00 0.00 2.75
626 627 5.998454 ATTCCATTAAGCAGTTCGATCTG 57.002 39.130 17.42 17.42 38.35 2.90
627 628 4.736126 TCCATTAAGCAGTTCGATCTGA 57.264 40.909 24.30 6.40 37.61 3.27
628 629 4.433615 TCCATTAAGCAGTTCGATCTGAC 58.566 43.478 24.30 15.82 37.61 3.51
629 630 3.243877 CCATTAAGCAGTTCGATCTGACG 59.756 47.826 24.30 1.76 37.61 4.35
630 631 2.561733 TAAGCAGTTCGATCTGACGG 57.438 50.000 24.30 4.33 37.61 4.79
631 632 0.737715 AAGCAGTTCGATCTGACGGC 60.738 55.000 24.30 13.80 37.61 5.68
632 633 2.167861 GCAGTTCGATCTGACGGCC 61.168 63.158 24.30 5.22 37.61 6.13
633 634 1.874019 CAGTTCGATCTGACGGCCG 60.874 63.158 26.86 26.86 37.61 6.13
634 635 2.044555 AGTTCGATCTGACGGCCGA 61.045 57.895 35.90 10.13 0.00 5.54
635 636 1.586564 GTTCGATCTGACGGCCGAG 60.587 63.158 35.90 20.77 32.41 4.63
636 637 1.747745 TTCGATCTGACGGCCGAGA 60.748 57.895 35.90 25.82 32.41 4.04
637 638 1.715862 TTCGATCTGACGGCCGAGAG 61.716 60.000 35.90 25.49 32.41 3.20
638 639 2.473760 CGATCTGACGGCCGAGAGT 61.474 63.158 35.90 9.58 0.00 3.24
639 640 1.357334 GATCTGACGGCCGAGAGTC 59.643 63.158 35.90 19.94 37.85 3.36
640 641 2.381665 GATCTGACGGCCGAGAGTCG 62.382 65.000 35.90 14.64 40.05 4.18
641 642 4.838486 CTGACGGCCGAGAGTCGC 62.838 72.222 35.90 11.74 38.82 5.19
643 644 3.200593 GACGGCCGAGAGTCGCTA 61.201 66.667 35.90 0.00 38.82 4.26
644 645 2.749044 ACGGCCGAGAGTCGCTAA 60.749 61.111 35.90 0.00 38.82 3.09
645 646 2.061182 GACGGCCGAGAGTCGCTAAT 62.061 60.000 35.90 3.54 38.82 1.73
646 647 1.370657 CGGCCGAGAGTCGCTAATC 60.371 63.158 24.07 0.00 38.82 1.75
647 648 1.787057 CGGCCGAGAGTCGCTAATCT 61.787 60.000 24.07 0.00 38.82 2.40
648 649 0.039888 GGCCGAGAGTCGCTAATCTC 60.040 60.000 5.67 5.67 38.82 2.75
649 650 0.948678 GCCGAGAGTCGCTAATCTCT 59.051 55.000 12.99 5.54 42.72 3.10
650 651 2.144730 GCCGAGAGTCGCTAATCTCTA 58.855 52.381 12.99 0.00 40.53 2.43
651 652 2.548904 GCCGAGAGTCGCTAATCTCTAA 59.451 50.000 12.99 0.00 40.53 2.10
652 653 3.364565 GCCGAGAGTCGCTAATCTCTAAG 60.365 52.174 12.99 4.14 40.53 2.18
653 654 4.059511 CCGAGAGTCGCTAATCTCTAAGA 58.940 47.826 12.99 0.00 40.53 2.10
654 655 4.151689 CCGAGAGTCGCTAATCTCTAAGAG 59.848 50.000 12.99 0.00 40.53 2.85
655 656 4.377022 CGAGAGTCGCTAATCTCTAAGAGC 60.377 50.000 12.99 0.00 40.53 4.09
656 657 4.456535 AGAGTCGCTAATCTCTAAGAGCA 58.543 43.478 0.00 0.00 38.97 4.26
657 658 4.515191 AGAGTCGCTAATCTCTAAGAGCAG 59.485 45.833 0.00 0.00 38.97 4.24
658 659 3.004315 AGTCGCTAATCTCTAAGAGCAGC 59.996 47.826 8.52 8.52 34.49 5.25
659 660 3.004315 GTCGCTAATCTCTAAGAGCAGCT 59.996 47.826 0.00 0.00 34.49 4.24
660 661 3.252215 TCGCTAATCTCTAAGAGCAGCTC 59.748 47.826 15.25 15.25 34.49 4.09
661 662 3.253188 CGCTAATCTCTAAGAGCAGCTCT 59.747 47.826 20.04 20.04 43.37 4.09
662 663 4.454161 CGCTAATCTCTAAGAGCAGCTCTA 59.546 45.833 25.66 9.89 40.28 2.43
663 664 5.390885 CGCTAATCTCTAAGAGCAGCTCTAG 60.391 48.000 25.66 18.53 40.28 2.43
664 665 4.853924 AATCTCTAAGAGCAGCTCTAGC 57.146 45.455 25.66 0.00 40.28 3.42
665 666 2.582052 TCTCTAAGAGCAGCTCTAGCC 58.418 52.381 25.66 0.00 40.28 3.93
666 667 1.613437 CTCTAAGAGCAGCTCTAGCCC 59.387 57.143 25.66 0.00 40.28 5.19
667 668 0.678950 CTAAGAGCAGCTCTAGCCCC 59.321 60.000 25.66 0.00 40.28 5.80
668 669 0.760945 TAAGAGCAGCTCTAGCCCCC 60.761 60.000 25.66 0.00 40.28 5.40
683 684 2.942641 CCCCCTCCGTTCTTGTTTC 58.057 57.895 0.00 0.00 0.00 2.78
684 685 0.400594 CCCCCTCCGTTCTTGTTTCT 59.599 55.000 0.00 0.00 0.00 2.52
685 686 1.523758 CCCCTCCGTTCTTGTTTCTG 58.476 55.000 0.00 0.00 0.00 3.02
686 687 1.523758 CCCTCCGTTCTTGTTTCTGG 58.476 55.000 0.00 0.00 0.00 3.86
700 701 0.970937 TTCTGGATTCTCGTCGCCCT 60.971 55.000 0.00 0.00 0.00 5.19
815 816 4.589675 TTCCCACCGCCAACACCC 62.590 66.667 0.00 0.00 0.00 4.61
901 908 2.526046 CCCCGTCCCAGTCTTTGGT 61.526 63.158 0.00 0.00 46.25 3.67
938 945 0.107459 GAGGTTGTCTCCATCCAGCC 60.107 60.000 0.00 0.00 36.52 4.85
1142 1152 6.002062 ACTCTACTTGCTGCAAAAACATAC 57.998 37.500 16.74 0.00 0.00 2.39
1159 1169 3.059868 ACATACGCTGTTTGACTGTTTCG 60.060 43.478 6.25 0.00 32.90 3.46
1283 1306 1.141019 GCTTCGTCGTAGGATGGCA 59.859 57.895 4.87 0.00 0.00 4.92
1305 1331 8.303876 TGGCACATCTTCTTTTTACCTTTATTC 58.696 33.333 0.00 0.00 0.00 1.75
1306 1332 8.303876 GGCACATCTTCTTTTTACCTTTATTCA 58.696 33.333 0.00 0.00 0.00 2.57
1319 1345 4.634443 ACCTTTATTCACATACGCCAACTC 59.366 41.667 0.00 0.00 0.00 3.01
1325 1351 1.464608 CACATACGCCAACTCTGTTGG 59.535 52.381 21.25 21.25 42.37 3.77
1332 1358 1.502231 CCAACTCTGTTGGTCAGACG 58.498 55.000 18.32 0.00 46.77 4.18
1558 1585 2.427506 CAGCTCAACCCTGGTTAACTC 58.572 52.381 5.42 0.00 36.46 3.01
1569 1596 6.265304 ACCCTGGTTAACTCTCTCTAATCTT 58.735 40.000 5.42 0.00 0.00 2.40
1776 1807 7.664082 AATTGATATTTAGATCCTGCTGACG 57.336 36.000 0.00 0.00 0.00 4.35
1808 1845 2.025037 TGCTCCACTTTGAGGGCATTAT 60.025 45.455 0.00 0.00 32.81 1.28
1860 1897 2.885135 TGCACAGTTGGAGGAATCAT 57.115 45.000 0.00 0.00 0.00 2.45
1876 1914 7.301868 AGGAATCATGTAATTTGTGTGGTTT 57.698 32.000 0.00 0.00 0.00 3.27
1877 1915 7.734942 AGGAATCATGTAATTTGTGTGGTTTT 58.265 30.769 0.00 0.00 0.00 2.43
1878 1916 8.210265 AGGAATCATGTAATTTGTGTGGTTTTT 58.790 29.630 0.00 0.00 0.00 1.94
1919 1957 7.781324 AATTCAGTCCCACATATTTGACTTT 57.219 32.000 0.00 0.00 35.97 2.66
2076 2116 3.637273 GGGTCGGTCAGCCACCTT 61.637 66.667 1.12 0.00 44.21 3.50
2206 2246 8.629158 AGTGTGAAGTGATATCTGAGTCTTATC 58.371 37.037 3.98 0.00 0.00 1.75
2378 2422 2.550830 TTCTCCACTTTGAGAGCACC 57.449 50.000 0.00 0.00 42.10 5.01
2383 2427 1.876156 CCACTTTGAGAGCACCACTTC 59.124 52.381 0.00 0.00 0.00 3.01
2689 2733 3.857549 TCTTTCTGTCGTCAGGATCAG 57.142 47.619 9.79 0.00 41.59 2.90
2796 2842 3.867665 TCGTTTGTTGTGTGATTTAGCG 58.132 40.909 0.00 0.00 0.00 4.26
3250 3299 4.645136 ACCTCGTTCTGTGAATATCTAGCA 59.355 41.667 0.00 0.00 0.00 3.49
3282 3331 4.156008 ACGCTCAACCTGAATTTTGATACC 59.844 41.667 0.00 0.00 31.41 2.73
3303 3354 3.046390 CTCAGTTCGATAATCTCCACGC 58.954 50.000 0.00 0.00 0.00 5.34
3370 3421 1.524165 CAGGCTGCTGCATCTCTCC 60.524 63.158 17.89 0.00 41.91 3.71
3408 3459 4.814294 AATCGTCCCGACCGCTGC 62.814 66.667 0.00 0.00 39.18 5.25
3524 3575 6.754209 ACTTCTAGTCAGTTGATTAGAATGCG 59.246 38.462 20.44 14.37 45.74 4.73
3592 3643 3.450457 TGTTGGCACTGAGTTGGAAAAAT 59.550 39.130 0.00 0.00 0.00 1.82
3597 3648 5.048083 TGGCACTGAGTTGGAAAAATGTATC 60.048 40.000 0.00 0.00 0.00 2.24
3598 3649 5.088739 GCACTGAGTTGGAAAAATGTATCG 58.911 41.667 0.00 0.00 0.00 2.92
3602 3653 6.262273 ACTGAGTTGGAAAAATGTATCGTTGT 59.738 34.615 0.00 0.00 0.00 3.32
3630 3682 9.020731 ACTGGGTTTTTGTAATTGTATAAGAGG 57.979 33.333 0.00 0.00 0.00 3.69
3636 3743 4.699637 TGTAATTGTATAAGAGGTGCGGG 58.300 43.478 0.00 0.00 0.00 6.13
3637 3744 2.930826 ATTGTATAAGAGGTGCGGGG 57.069 50.000 0.00 0.00 0.00 5.73
3659 3766 3.643792 GCATCTCCCCGGCTTATCTATAT 59.356 47.826 0.00 0.00 0.00 0.86
3660 3767 4.833380 GCATCTCCCCGGCTTATCTATATA 59.167 45.833 0.00 0.00 0.00 0.86
3661 3768 5.047660 GCATCTCCCCGGCTTATCTATATAG 60.048 48.000 3.10 3.10 0.00 1.31
3663 3770 6.836714 TCTCCCCGGCTTATCTATATAGTA 57.163 41.667 9.58 0.00 0.00 1.82
3664 3771 6.839454 TCTCCCCGGCTTATCTATATAGTAG 58.161 44.000 9.58 7.14 0.00 2.57
3665 3772 6.389278 TCTCCCCGGCTTATCTATATAGTAGT 59.611 42.308 9.58 0.91 0.00 2.73
3666 3773 7.570232 TCTCCCCGGCTTATCTATATAGTAGTA 59.430 40.741 9.58 0.05 0.00 1.82
3667 3774 8.106017 TCCCCGGCTTATCTATATAGTAGTAA 57.894 38.462 9.58 7.08 0.00 2.24
3671 3778 9.680315 CCGGCTTATCTATATAGTAGTAATTGC 57.320 37.037 9.58 8.12 0.00 3.56
3708 3815 6.327386 AGTCTCTTTTCATATTTAGGCCCA 57.673 37.500 0.00 0.00 0.00 5.36
3709 3816 6.122964 AGTCTCTTTTCATATTTAGGCCCAC 58.877 40.000 0.00 0.00 0.00 4.61
3732 3853 9.103861 CCACATTGTTTGTTTACCATTTACTTT 57.896 29.630 0.00 0.00 36.00 2.66
3747 3868 8.912988 ACCATTTACTTTGTTTGAGAATTGAGA 58.087 29.630 0.00 0.00 0.00 3.27
3748 3869 9.918630 CCATTTACTTTGTTTGAGAATTGAGAT 57.081 29.630 0.00 0.00 0.00 2.75
3760 3881 6.475504 TGAGAATTGAGATTAGCAAAGGTGA 58.524 36.000 0.00 0.00 0.00 4.02
3761 3882 6.596888 TGAGAATTGAGATTAGCAAAGGTGAG 59.403 38.462 0.00 0.00 0.00 3.51
3776 3897 1.882623 GGTGAGGAAGCCAAAGAACAG 59.117 52.381 0.00 0.00 0.00 3.16
3777 3898 2.576615 GTGAGGAAGCCAAAGAACAGT 58.423 47.619 0.00 0.00 0.00 3.55
3778 3899 2.952310 GTGAGGAAGCCAAAGAACAGTT 59.048 45.455 0.00 0.00 0.00 3.16
3779 3900 4.134563 GTGAGGAAGCCAAAGAACAGTTA 58.865 43.478 0.00 0.00 0.00 2.24
3784 3907 5.243954 AGGAAGCCAAAGAACAGTTATTTCC 59.756 40.000 2.79 2.06 0.00 3.13
3789 3912 6.015940 AGCCAAAGAACAGTTATTTCCTTGAG 60.016 38.462 2.79 0.00 29.35 3.02
3808 3931 4.855340 TGAGAGGAAAGAACAGGTTGTTT 58.145 39.130 6.96 6.96 41.28 2.83
3812 3935 6.184789 AGAGGAAAGAACAGGTTGTTTTGTA 58.815 36.000 8.43 0.00 41.28 2.41
3815 3938 5.462068 GGAAAGAACAGGTTGTTTTGTATGC 59.538 40.000 8.43 0.00 41.28 3.14
3819 3942 7.341445 AGAACAGGTTGTTTTGTATGCTTTA 57.659 32.000 0.00 0.00 41.28 1.85
3820 3943 7.951591 AGAACAGGTTGTTTTGTATGCTTTAT 58.048 30.769 0.00 0.00 41.28 1.40
3821 3944 7.867403 AGAACAGGTTGTTTTGTATGCTTTATG 59.133 33.333 0.00 0.00 41.28 1.90
3822 3945 7.283625 ACAGGTTGTTTTGTATGCTTTATGA 57.716 32.000 0.00 0.00 0.00 2.15
3824 3947 8.200792 ACAGGTTGTTTTGTATGCTTTATGAAA 58.799 29.630 0.00 0.00 0.00 2.69
3854 3981 0.984230 TTTGTTTTGGTTGGGGTGCA 59.016 45.000 0.00 0.00 0.00 4.57
3857 3984 1.306141 TTTTGGTTGGGGTGCACCA 60.306 52.632 35.78 15.50 41.55 4.17
3883 4010 3.353600 CAGCGGTGCAACATCCAA 58.646 55.556 0.98 0.00 39.98 3.53
3889 4016 1.514678 GGTGCAACATCCAAGCGACA 61.515 55.000 0.00 0.00 39.98 4.35
3893 4020 1.737236 GCAACATCCAAGCGACACATA 59.263 47.619 0.00 0.00 0.00 2.29
3896 4023 3.541996 ACATCCAAGCGACACATATGA 57.458 42.857 10.38 0.00 0.00 2.15
3904 4031 0.882042 CGACACATATGAGCCCCAGC 60.882 60.000 10.38 0.00 40.32 4.85
3934 4064 0.549902 TGTGATGGACCCACCCTCAT 60.550 55.000 0.00 0.00 43.19 2.90
4033 4163 1.671328 GATCTTAGCCAAAAGGCCGAC 59.329 52.381 2.33 0.00 35.12 4.79
4044 4174 2.109425 AAGGCCGACAAAGGTATGAC 57.891 50.000 0.00 0.00 0.00 3.06
4121 4251 1.218316 CAGGCGAGGTGGGACTAAC 59.782 63.158 0.00 0.00 0.00 2.34
4122 4252 2.183555 GGCGAGGTGGGACTAACG 59.816 66.667 0.00 0.00 0.00 3.18
4123 4253 2.183555 GCGAGGTGGGACTAACGG 59.816 66.667 0.00 0.00 0.00 4.44
4124 4254 2.183555 CGAGGTGGGACTAACGGC 59.816 66.667 0.00 0.00 0.00 5.68
4125 4255 2.582978 GAGGTGGGACTAACGGCC 59.417 66.667 0.00 0.00 0.00 6.13
4126 4256 1.988406 GAGGTGGGACTAACGGCCT 60.988 63.158 0.00 0.00 0.00 5.19
4127 4257 1.957765 GAGGTGGGACTAACGGCCTC 61.958 65.000 0.00 0.00 36.21 4.70
4128 4258 2.183555 GTGGGACTAACGGCCTCG 59.816 66.667 0.00 0.00 43.02 4.63
4159 4289 0.464554 AAAGATAAGCGAGGCAGGGC 60.465 55.000 0.00 0.00 0.00 5.19
4160 4290 1.626356 AAGATAAGCGAGGCAGGGCA 61.626 55.000 0.00 0.00 0.00 5.36
4162 4292 3.764160 ATAAGCGAGGCAGGGCAGC 62.764 63.158 5.45 5.45 0.00 5.25
4168 4298 4.729918 AGGCAGGGCAGCGAAAGG 62.730 66.667 0.00 0.00 34.64 3.11
4170 4300 2.046314 GCAGGGCAGCGAAAGGTA 60.046 61.111 0.00 0.00 41.81 3.08
4174 4304 2.750888 GGGCAGCGAAAGGTAAGCG 61.751 63.158 0.00 0.00 41.81 4.68
4175 4305 2.033194 GGCAGCGAAAGGTAAGCGT 61.033 57.895 0.00 0.00 41.81 5.07
4177 4307 1.566018 GCAGCGAAAGGTAAGCGTGT 61.566 55.000 0.00 0.00 41.81 4.49
4178 4308 1.705256 CAGCGAAAGGTAAGCGTGTA 58.295 50.000 0.00 0.00 41.81 2.90
4179 4309 1.654105 CAGCGAAAGGTAAGCGTGTAG 59.346 52.381 0.00 0.00 41.81 2.74
4180 4310 1.271656 AGCGAAAGGTAAGCGTGTAGT 59.728 47.619 0.00 0.00 41.99 2.73
4181 4311 1.389106 GCGAAAGGTAAGCGTGTAGTG 59.611 52.381 0.00 0.00 0.00 2.74
4184 4314 3.121126 CGAAAGGTAAGCGTGTAGTGTTG 60.121 47.826 0.00 0.00 0.00 3.33
4186 4316 3.022607 AGGTAAGCGTGTAGTGTTGAC 57.977 47.619 0.00 0.00 0.00 3.18
4187 4317 1.717645 GGTAAGCGTGTAGTGTTGACG 59.282 52.381 0.00 0.00 36.18 4.35
4188 4318 1.717645 GTAAGCGTGTAGTGTTGACGG 59.282 52.381 0.00 0.00 33.68 4.79
4190 4320 2.664436 GCGTGTAGTGTTGACGGCC 61.664 63.158 0.00 0.00 33.68 6.13
4191 4321 1.006571 CGTGTAGTGTTGACGGCCT 60.007 57.895 0.00 0.00 0.00 5.19
4192 4322 1.007336 CGTGTAGTGTTGACGGCCTC 61.007 60.000 0.00 0.00 0.00 4.70
4193 4323 1.007336 GTGTAGTGTTGACGGCCTCG 61.007 60.000 0.00 0.00 43.02 4.63
4425 4574 1.683365 GTCCACTGCCGGTACCCTA 60.683 63.158 6.25 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.154347 CCCGAGGTGAGCAGCCTC 62.154 72.222 10.15 10.15 46.75 4.70
1 2 3.602075 TACCCGAGGTGAGCAGCCT 62.602 63.158 5.90 0.00 36.19 4.58
2 3 3.075005 TACCCGAGGTGAGCAGCC 61.075 66.667 5.90 0.00 36.19 4.85
3 4 1.889530 AACTACCCGAGGTGAGCAGC 61.890 60.000 5.90 0.00 36.19 5.25
4 5 0.173708 GAACTACCCGAGGTGAGCAG 59.826 60.000 5.90 0.00 36.19 4.24
5 6 0.251653 AGAACTACCCGAGGTGAGCA 60.252 55.000 5.90 0.00 36.19 4.26
7 8 1.477295 GGAAGAACTACCCGAGGTGAG 59.523 57.143 5.90 3.09 36.19 3.51
8 9 1.553706 GGAAGAACTACCCGAGGTGA 58.446 55.000 5.90 0.00 36.19 4.02
9 10 0.535797 GGGAAGAACTACCCGAGGTG 59.464 60.000 5.90 0.02 36.19 4.00
10 11 2.987985 GGGAAGAACTACCCGAGGT 58.012 57.895 1.14 1.14 40.16 3.85
15 16 0.616964 ACCTCCGGGAAGAACTACCC 60.617 60.000 0.00 0.00 42.43 3.69
16 17 0.535797 CACCTCCGGGAAGAACTACC 59.464 60.000 0.00 0.00 36.25 3.18
17 18 0.108281 GCACCTCCGGGAAGAACTAC 60.108 60.000 0.00 0.00 36.25 2.73
18 19 0.543410 TGCACCTCCGGGAAGAACTA 60.543 55.000 0.00 0.00 36.25 2.24
19 20 1.201429 ATGCACCTCCGGGAAGAACT 61.201 55.000 0.00 0.00 36.25 3.01
20 21 1.026718 CATGCACCTCCGGGAAGAAC 61.027 60.000 0.00 0.00 36.25 3.01
21 22 1.299648 CATGCACCTCCGGGAAGAA 59.700 57.895 0.00 0.00 36.25 2.52
22 23 2.669133 CCATGCACCTCCGGGAAGA 61.669 63.158 0.00 0.00 36.25 2.87
23 24 2.124570 CCATGCACCTCCGGGAAG 60.125 66.667 0.00 0.00 36.25 3.46
24 25 2.609299 TCCATGCACCTCCGGGAA 60.609 61.111 0.00 0.00 36.25 3.97
25 26 3.399181 GTCCATGCACCTCCGGGA 61.399 66.667 0.00 0.00 36.25 5.14
26 27 4.838152 CGTCCATGCACCTCCGGG 62.838 72.222 0.00 0.00 38.88 5.73
29 30 4.451150 TCGCGTCCATGCACCTCC 62.451 66.667 5.77 0.00 34.15 4.30
30 31 2.887568 CTCGCGTCCATGCACCTC 60.888 66.667 5.77 0.00 34.15 3.85
31 32 4.457496 CCTCGCGTCCATGCACCT 62.457 66.667 5.77 0.00 34.15 4.00
32 33 3.740128 ATCCTCGCGTCCATGCACC 62.740 63.158 5.77 0.00 34.15 5.01
33 34 2.202932 ATCCTCGCGTCCATGCAC 60.203 61.111 5.77 0.00 34.15 4.57
34 35 2.202919 CATCCTCGCGTCCATGCA 60.203 61.111 5.77 0.00 34.15 3.96
35 36 2.202932 ACATCCTCGCGTCCATGC 60.203 61.111 5.77 0.00 0.00 4.06
36 37 0.249615 ATGACATCCTCGCGTCCATG 60.250 55.000 5.77 9.09 0.00 3.66
37 38 0.032678 GATGACATCCTCGCGTCCAT 59.967 55.000 5.77 0.31 0.00 3.41
38 39 1.437573 GATGACATCCTCGCGTCCA 59.562 57.895 5.77 0.00 0.00 4.02
39 40 1.300233 GGATGACATCCTCGCGTCC 60.300 63.158 24.77 0.00 46.19 4.79
40 41 4.327885 GGATGACATCCTCGCGTC 57.672 61.111 24.77 0.00 46.19 5.19
48 49 1.596477 GGAGCAGCGGGATGACATC 60.596 63.158 6.91 6.91 0.00 3.06
49 50 2.037620 GAGGAGCAGCGGGATGACAT 62.038 60.000 0.00 0.00 0.00 3.06
50 51 2.685017 AGGAGCAGCGGGATGACA 60.685 61.111 0.00 0.00 0.00 3.58
51 52 2.107953 GAGGAGCAGCGGGATGAC 59.892 66.667 0.00 0.00 0.00 3.06
52 53 3.157252 GGAGGAGCAGCGGGATGA 61.157 66.667 0.00 0.00 0.00 2.92
53 54 3.457625 CTGGAGGAGCAGCGGGATG 62.458 68.421 0.00 0.00 0.00 3.51
54 55 3.160047 CTGGAGGAGCAGCGGGAT 61.160 66.667 0.00 0.00 0.00 3.85
111 112 1.802636 CCATTGCGTGGTCATCACC 59.197 57.895 0.00 0.00 43.44 4.02
120 121 2.401766 GCCACTCCTCCATTGCGTG 61.402 63.158 0.00 0.00 0.00 5.34
121 122 2.045926 GCCACTCCTCCATTGCGT 60.046 61.111 0.00 0.00 0.00 5.24
122 123 3.197790 CGCCACTCCTCCATTGCG 61.198 66.667 0.00 0.00 35.81 4.85
123 124 2.825836 CCGCCACTCCTCCATTGC 60.826 66.667 0.00 0.00 0.00 3.56
124 125 2.124570 CCCGCCACTCCTCCATTG 60.125 66.667 0.00 0.00 0.00 2.82
125 126 3.411517 CCCCGCCACTCCTCCATT 61.412 66.667 0.00 0.00 0.00 3.16
126 127 4.414956 TCCCCGCCACTCCTCCAT 62.415 66.667 0.00 0.00 0.00 3.41
138 139 1.772819 ATATTGGCAGGAGCTCCCCG 61.773 60.000 29.54 21.27 41.70 5.73
139 140 0.251077 CATATTGGCAGGAGCTCCCC 60.251 60.000 29.54 23.49 41.70 4.81
140 141 0.475906 ACATATTGGCAGGAGCTCCC 59.524 55.000 29.54 14.82 41.70 4.30
141 142 1.141657 TCACATATTGGCAGGAGCTCC 59.858 52.381 26.22 26.22 41.70 4.70
142 143 2.627515 TCACATATTGGCAGGAGCTC 57.372 50.000 4.71 4.71 41.70 4.09
143 144 2.174210 ACATCACATATTGGCAGGAGCT 59.826 45.455 0.00 0.00 41.70 4.09
144 145 2.579873 ACATCACATATTGGCAGGAGC 58.420 47.619 0.00 0.00 41.10 4.70
145 146 3.317149 CCAACATCACATATTGGCAGGAG 59.683 47.826 0.00 0.00 36.72 3.69
146 147 3.053768 TCCAACATCACATATTGGCAGGA 60.054 43.478 0.00 0.00 42.28 3.86
147 148 3.289836 TCCAACATCACATATTGGCAGG 58.710 45.455 0.00 0.00 42.28 4.85
148 149 3.317149 CCTCCAACATCACATATTGGCAG 59.683 47.826 0.00 0.00 42.28 4.85
149 150 3.289836 CCTCCAACATCACATATTGGCA 58.710 45.455 0.00 0.00 42.28 4.92
150 151 2.035066 GCCTCCAACATCACATATTGGC 59.965 50.000 0.00 0.00 42.28 4.52
151 152 2.291465 CGCCTCCAACATCACATATTGG 59.709 50.000 0.00 0.00 43.64 3.16
152 153 2.291465 CCGCCTCCAACATCACATATTG 59.709 50.000 0.00 0.00 0.00 1.90
153 154 2.575532 CCGCCTCCAACATCACATATT 58.424 47.619 0.00 0.00 0.00 1.28
154 155 1.815408 GCCGCCTCCAACATCACATAT 60.815 52.381 0.00 0.00 0.00 1.78
155 156 0.463654 GCCGCCTCCAACATCACATA 60.464 55.000 0.00 0.00 0.00 2.29
156 157 1.750399 GCCGCCTCCAACATCACAT 60.750 57.895 0.00 0.00 0.00 3.21
157 158 2.359850 GCCGCCTCCAACATCACA 60.360 61.111 0.00 0.00 0.00 3.58
158 159 3.134127 GGCCGCCTCCAACATCAC 61.134 66.667 0.71 0.00 0.00 3.06
159 160 1.631071 TATGGCCGCCTCCAACATCA 61.631 55.000 11.61 0.00 39.96 3.07
160 161 0.886490 CTATGGCCGCCTCCAACATC 60.886 60.000 11.61 0.00 39.96 3.06
161 162 1.149174 CTATGGCCGCCTCCAACAT 59.851 57.895 11.61 0.00 39.96 2.71
162 163 2.589540 CTATGGCCGCCTCCAACA 59.410 61.111 11.61 0.00 39.96 3.33
163 164 2.902343 GCTATGGCCGCCTCCAAC 60.902 66.667 11.61 0.00 39.96 3.77
164 165 3.089874 AGCTATGGCCGCCTCCAA 61.090 61.111 11.61 0.00 39.96 3.53
165 166 3.865383 CAGCTATGGCCGCCTCCA 61.865 66.667 11.61 0.00 40.97 3.86
166 167 3.550431 TCAGCTATGGCCGCCTCC 61.550 66.667 11.61 0.00 39.73 4.30
167 168 2.280457 GTCAGCTATGGCCGCCTC 60.280 66.667 11.61 0.00 39.73 4.70
168 169 3.866582 GGTCAGCTATGGCCGCCT 61.867 66.667 11.61 0.00 42.51 5.52
173 174 4.256180 CCCCCGGTCAGCTATGGC 62.256 72.222 0.00 0.00 39.06 4.40
174 175 4.256180 GCCCCCGGTCAGCTATGG 62.256 72.222 0.00 0.00 0.00 2.74
175 176 4.609018 CGCCCCCGGTCAGCTATG 62.609 72.222 0.00 0.00 0.00 2.23
186 187 4.467107 AGAGAGGTCTCCGCCCCC 62.467 72.222 3.26 0.00 43.88 5.40
187 188 2.835895 GAGAGAGGTCTCCGCCCC 60.836 72.222 3.26 0.00 43.26 5.80
193 194 6.646439 CTCACGAGAGAAAGAGAGAGGTCTC 61.646 52.000 3.49 0.00 45.73 3.36
194 195 3.008594 TCACGAGAGAAAGAGAGAGGTCT 59.991 47.826 0.00 0.00 34.86 3.85
195 196 3.340034 TCACGAGAGAAAGAGAGAGGTC 58.660 50.000 0.00 0.00 0.00 3.85
196 197 3.343617 CTCACGAGAGAAAGAGAGAGGT 58.656 50.000 3.49 0.00 44.98 3.85
197 198 2.682856 CCTCACGAGAGAAAGAGAGAGG 59.317 54.545 11.76 0.00 44.98 3.69
198 199 2.682856 CCCTCACGAGAGAAAGAGAGAG 59.317 54.545 11.76 0.00 44.98 3.20
199 200 2.717390 CCCTCACGAGAGAAAGAGAGA 58.283 52.381 11.76 0.00 44.98 3.10
200 201 1.134175 GCCCTCACGAGAGAAAGAGAG 59.866 57.143 11.76 0.00 44.98 3.20
201 202 1.178276 GCCCTCACGAGAGAAAGAGA 58.822 55.000 11.76 0.00 44.98 3.10
202 203 0.174617 GGCCCTCACGAGAGAAAGAG 59.825 60.000 11.76 0.00 44.98 2.85
203 204 1.595993 CGGCCCTCACGAGAGAAAGA 61.596 60.000 11.76 0.00 44.98 2.52
204 205 1.153745 CGGCCCTCACGAGAGAAAG 60.154 63.158 11.76 1.17 44.98 2.62
205 206 1.605451 TCGGCCCTCACGAGAGAAA 60.605 57.895 11.76 0.00 44.98 2.52
206 207 2.035155 TCGGCCCTCACGAGAGAA 59.965 61.111 11.76 0.00 44.98 2.87
207 208 2.750637 GTCGGCCCTCACGAGAGA 60.751 66.667 11.76 0.00 44.98 3.10
208 209 4.180946 CGTCGGCCCTCACGAGAG 62.181 72.222 10.33 2.49 41.50 3.20
209 210 4.710167 TCGTCGGCCCTCACGAGA 62.710 66.667 13.72 0.00 40.05 4.04
210 211 4.477975 GTCGTCGGCCCTCACGAG 62.478 72.222 17.19 0.00 45.30 4.18
213 214 4.477975 CTCGTCGTCGGCCCTCAC 62.478 72.222 0.00 0.00 37.69 3.51
221 222 4.838486 GAGCCTGGCTCGTCGTCG 62.838 72.222 31.03 0.00 45.85 5.12
236 237 1.218585 CAGTGCTCAGCAGGAGGAG 59.781 63.158 0.00 0.00 45.37 3.69
237 238 0.616964 ATCAGTGCTCAGCAGGAGGA 60.617 55.000 0.00 0.00 44.22 3.71
238 239 0.462225 CATCAGTGCTCAGCAGGAGG 60.462 60.000 0.00 0.00 44.22 4.30
239 240 0.462225 CCATCAGTGCTCAGCAGGAG 60.462 60.000 0.00 0.00 46.93 3.69
240 241 1.600638 CCATCAGTGCTCAGCAGGA 59.399 57.895 0.00 0.34 40.08 3.86
241 242 1.451567 CCCATCAGTGCTCAGCAGG 60.452 63.158 0.00 0.00 40.08 4.85
242 243 2.113433 GCCCATCAGTGCTCAGCAG 61.113 63.158 0.00 0.00 40.08 4.24
243 244 2.045634 GCCCATCAGTGCTCAGCA 60.046 61.111 0.00 0.00 35.60 4.41
244 245 3.200593 CGCCCATCAGTGCTCAGC 61.201 66.667 0.00 0.00 0.00 4.26
245 246 2.513204 CCGCCCATCAGTGCTCAG 60.513 66.667 0.00 0.00 0.00 3.35
246 247 4.100084 CCCGCCCATCAGTGCTCA 62.100 66.667 0.00 0.00 0.00 4.26
247 248 3.329542 TTCCCGCCCATCAGTGCTC 62.330 63.158 0.00 0.00 0.00 4.26
248 249 3.329889 TTCCCGCCCATCAGTGCT 61.330 61.111 0.00 0.00 0.00 4.40
249 250 2.825836 CTTCCCGCCCATCAGTGC 60.826 66.667 0.00 0.00 0.00 4.40
250 251 2.124570 CCTTCCCGCCCATCAGTG 60.125 66.667 0.00 0.00 0.00 3.66
251 252 2.285368 TCCTTCCCGCCCATCAGT 60.285 61.111 0.00 0.00 0.00 3.41
252 253 2.507944 CTCCTTCCCGCCCATCAG 59.492 66.667 0.00 0.00 0.00 2.90
253 254 3.089874 CCTCCTTCCCGCCCATCA 61.090 66.667 0.00 0.00 0.00 3.07
254 255 2.768344 TCCTCCTTCCCGCCCATC 60.768 66.667 0.00 0.00 0.00 3.51
255 256 2.770048 CTCCTCCTTCCCGCCCAT 60.770 66.667 0.00 0.00 0.00 4.00
256 257 4.005978 TCTCCTCCTTCCCGCCCA 62.006 66.667 0.00 0.00 0.00 5.36
257 258 3.471806 GTCTCCTCCTTCCCGCCC 61.472 72.222 0.00 0.00 0.00 6.13
258 259 1.838073 TTTGTCTCCTCCTTCCCGCC 61.838 60.000 0.00 0.00 0.00 6.13
259 260 0.391793 CTTTGTCTCCTCCTTCCCGC 60.392 60.000 0.00 0.00 0.00 6.13
260 261 0.391793 GCTTTGTCTCCTCCTTCCCG 60.392 60.000 0.00 0.00 0.00 5.14
261 262 0.391793 CGCTTTGTCTCCTCCTTCCC 60.392 60.000 0.00 0.00 0.00 3.97
262 263 0.608640 TCGCTTTGTCTCCTCCTTCC 59.391 55.000 0.00 0.00 0.00 3.46
263 264 1.715993 GTCGCTTTGTCTCCTCCTTC 58.284 55.000 0.00 0.00 0.00 3.46
264 265 0.038159 CGTCGCTTTGTCTCCTCCTT 60.038 55.000 0.00 0.00 0.00 3.36
265 266 1.587054 CGTCGCTTTGTCTCCTCCT 59.413 57.895 0.00 0.00 0.00 3.69
266 267 1.446272 CCGTCGCTTTGTCTCCTCC 60.446 63.158 0.00 0.00 0.00 4.30
267 268 1.446272 CCCGTCGCTTTGTCTCCTC 60.446 63.158 0.00 0.00 0.00 3.71
268 269 2.207924 ACCCGTCGCTTTGTCTCCT 61.208 57.895 0.00 0.00 0.00 3.69
269 270 2.027625 CACCCGTCGCTTTGTCTCC 61.028 63.158 0.00 0.00 0.00 3.71
270 271 2.668280 GCACCCGTCGCTTTGTCTC 61.668 63.158 0.00 0.00 0.00 3.36
271 272 2.665185 GCACCCGTCGCTTTGTCT 60.665 61.111 0.00 0.00 0.00 3.41
272 273 4.072088 CGCACCCGTCGCTTTGTC 62.072 66.667 0.00 0.00 0.00 3.18
273 274 4.595538 TCGCACCCGTCGCTTTGT 62.596 61.111 0.00 0.00 35.54 2.83
274 275 3.777925 CTCGCACCCGTCGCTTTG 61.778 66.667 0.00 0.00 35.54 2.77
284 285 4.899239 CATCCTCGGCCTCGCACC 62.899 72.222 0.00 0.00 36.13 5.01
285 286 4.899239 CCATCCTCGGCCTCGCAC 62.899 72.222 0.00 0.00 36.13 5.34
289 290 3.237741 CTCCCCATCCTCGGCCTC 61.238 72.222 0.00 0.00 0.00 4.70
292 293 4.247380 CTGCTCCCCATCCTCGGC 62.247 72.222 0.00 0.00 0.00 5.54
293 294 3.554342 CCTGCTCCCCATCCTCGG 61.554 72.222 0.00 0.00 0.00 4.63
294 295 3.554342 CCCTGCTCCCCATCCTCG 61.554 72.222 0.00 0.00 0.00 4.63
295 296 3.883549 GCCCTGCTCCCCATCCTC 61.884 72.222 0.00 0.00 0.00 3.71
298 299 4.247380 CTCGCCCTGCTCCCCATC 62.247 72.222 0.00 0.00 0.00 3.51
302 303 4.496336 ATTGCTCGCCCTGCTCCC 62.496 66.667 0.00 0.00 0.00 4.30
303 304 3.207669 CATTGCTCGCCCTGCTCC 61.208 66.667 0.00 0.00 0.00 4.70
304 305 3.207669 CCATTGCTCGCCCTGCTC 61.208 66.667 0.00 0.00 0.00 4.26
326 327 4.715130 TCCTGTCCTCCCCCACGG 62.715 72.222 0.00 0.00 0.00 4.94
327 328 3.077556 CTCCTGTCCTCCCCCACG 61.078 72.222 0.00 0.00 0.00 4.94
328 329 3.403558 GCTCCTGTCCTCCCCCAC 61.404 72.222 0.00 0.00 0.00 4.61
356 357 3.461773 ATGTCCTCCCTGGTCGCG 61.462 66.667 0.00 0.00 37.07 5.87
357 358 2.187946 CATGTCCTCCCTGGTCGC 59.812 66.667 0.00 0.00 37.07 5.19
358 359 1.819229 CTCATGTCCTCCCTGGTCG 59.181 63.158 0.00 0.00 37.07 4.79
359 360 1.524482 GCTCATGTCCTCCCTGGTC 59.476 63.158 0.00 0.00 37.07 4.02
360 361 2.362369 CGCTCATGTCCTCCCTGGT 61.362 63.158 0.00 0.00 37.07 4.00
361 362 1.617018 TTCGCTCATGTCCTCCCTGG 61.617 60.000 0.00 0.00 37.10 4.45
362 363 0.179089 CTTCGCTCATGTCCTCCCTG 60.179 60.000 0.00 0.00 0.00 4.45
363 364 1.333636 CCTTCGCTCATGTCCTCCCT 61.334 60.000 0.00 0.00 0.00 4.20
364 365 1.144936 CCTTCGCTCATGTCCTCCC 59.855 63.158 0.00 0.00 0.00 4.30
365 366 0.103937 CTCCTTCGCTCATGTCCTCC 59.896 60.000 0.00 0.00 0.00 4.30
366 367 1.066908 CTCTCCTTCGCTCATGTCCTC 59.933 57.143 0.00 0.00 0.00 3.71
367 368 1.110442 CTCTCCTTCGCTCATGTCCT 58.890 55.000 0.00 0.00 0.00 3.85
368 369 0.103937 CCTCTCCTTCGCTCATGTCC 59.896 60.000 0.00 0.00 0.00 4.02
369 370 0.103937 CCCTCTCCTTCGCTCATGTC 59.896 60.000 0.00 0.00 0.00 3.06
370 371 1.333636 CCCCTCTCCTTCGCTCATGT 61.334 60.000 0.00 0.00 0.00 3.21
371 372 1.445095 CCCCTCTCCTTCGCTCATG 59.555 63.158 0.00 0.00 0.00 3.07
372 373 2.439104 GCCCCTCTCCTTCGCTCAT 61.439 63.158 0.00 0.00 0.00 2.90
373 374 3.077556 GCCCCTCTCCTTCGCTCA 61.078 66.667 0.00 0.00 0.00 4.26
374 375 4.214327 CGCCCCTCTCCTTCGCTC 62.214 72.222 0.00 0.00 0.00 5.03
377 378 4.082523 TTGCGCCCCTCTCCTTCG 62.083 66.667 4.18 0.00 0.00 3.79
378 379 2.124942 CTTGCGCCCCTCTCCTTC 60.125 66.667 4.18 0.00 0.00 3.46
379 380 2.930562 ACTTGCGCCCCTCTCCTT 60.931 61.111 4.18 0.00 0.00 3.36
380 381 3.710722 CACTTGCGCCCCTCTCCT 61.711 66.667 4.18 0.00 0.00 3.69
381 382 4.785453 CCACTTGCGCCCCTCTCC 62.785 72.222 4.18 0.00 0.00 3.71
382 383 4.785453 CCCACTTGCGCCCCTCTC 62.785 72.222 4.18 0.00 0.00 3.20
384 385 4.785453 CTCCCACTTGCGCCCCTC 62.785 72.222 4.18 0.00 0.00 4.30
388 389 4.329545 TCCACTCCCACTTGCGCC 62.330 66.667 4.18 0.00 0.00 6.53
389 390 2.743928 CTCCACTCCCACTTGCGC 60.744 66.667 0.00 0.00 0.00 6.09
390 391 2.046892 CCTCCACTCCCACTTGCG 60.047 66.667 0.00 0.00 0.00 4.85
391 392 1.553690 TAGCCTCCACTCCCACTTGC 61.554 60.000 0.00 0.00 0.00 4.01
392 393 0.539051 CTAGCCTCCACTCCCACTTG 59.461 60.000 0.00 0.00 0.00 3.16
393 394 0.618968 CCTAGCCTCCACTCCCACTT 60.619 60.000 0.00 0.00 0.00 3.16
394 395 1.002274 CCTAGCCTCCACTCCCACT 59.998 63.158 0.00 0.00 0.00 4.00
395 396 2.066999 CCCTAGCCTCCACTCCCAC 61.067 68.421 0.00 0.00 0.00 4.61
396 397 2.119847 AACCCTAGCCTCCACTCCCA 62.120 60.000 0.00 0.00 0.00 4.37
397 398 1.307084 AACCCTAGCCTCCACTCCC 60.307 63.158 0.00 0.00 0.00 4.30
398 399 0.325765 AGAACCCTAGCCTCCACTCC 60.326 60.000 0.00 0.00 0.00 3.85
399 400 0.827368 CAGAACCCTAGCCTCCACTC 59.173 60.000 0.00 0.00 0.00 3.51
400 401 0.413832 TCAGAACCCTAGCCTCCACT 59.586 55.000 0.00 0.00 0.00 4.00
401 402 1.066071 GTTCAGAACCCTAGCCTCCAC 60.066 57.143 1.29 0.00 0.00 4.02
402 403 1.276622 GTTCAGAACCCTAGCCTCCA 58.723 55.000 1.29 0.00 0.00 3.86
403 404 0.542333 GGTTCAGAACCCTAGCCTCC 59.458 60.000 20.57 0.00 46.12 4.30
413 414 3.306166 CGTGGTATCGATTGGTTCAGAAC 59.694 47.826 1.71 4.52 0.00 3.01
414 415 3.517602 CGTGGTATCGATTGGTTCAGAA 58.482 45.455 1.71 0.00 0.00 3.02
415 416 2.737359 GCGTGGTATCGATTGGTTCAGA 60.737 50.000 1.71 0.00 0.00 3.27
416 417 1.593006 GCGTGGTATCGATTGGTTCAG 59.407 52.381 1.71 0.00 0.00 3.02
417 418 1.647346 GCGTGGTATCGATTGGTTCA 58.353 50.000 1.71 0.00 0.00 3.18
418 419 0.935196 GGCGTGGTATCGATTGGTTC 59.065 55.000 1.71 0.00 0.00 3.62
419 420 0.250793 TGGCGTGGTATCGATTGGTT 59.749 50.000 1.71 0.00 0.00 3.67
420 421 0.461339 GTGGCGTGGTATCGATTGGT 60.461 55.000 1.71 0.00 0.00 3.67
421 422 0.461163 TGTGGCGTGGTATCGATTGG 60.461 55.000 1.71 0.00 0.00 3.16
422 423 0.650512 GTGTGGCGTGGTATCGATTG 59.349 55.000 1.71 0.00 0.00 2.67
423 424 0.248012 TGTGTGGCGTGGTATCGATT 59.752 50.000 1.71 0.00 0.00 3.34
424 425 0.459585 GTGTGTGGCGTGGTATCGAT 60.460 55.000 2.16 2.16 0.00 3.59
425 426 1.080366 GTGTGTGGCGTGGTATCGA 60.080 57.895 0.00 0.00 0.00 3.59
426 427 0.946700 TTGTGTGTGGCGTGGTATCG 60.947 55.000 0.00 0.00 0.00 2.92
427 428 1.396996 GATTGTGTGTGGCGTGGTATC 59.603 52.381 0.00 0.00 0.00 2.24
428 429 1.271108 TGATTGTGTGTGGCGTGGTAT 60.271 47.619 0.00 0.00 0.00 2.73
429 430 0.106894 TGATTGTGTGTGGCGTGGTA 59.893 50.000 0.00 0.00 0.00 3.25
430 431 1.153066 TGATTGTGTGTGGCGTGGT 60.153 52.632 0.00 0.00 0.00 4.16
431 432 1.282570 GTGATTGTGTGTGGCGTGG 59.717 57.895 0.00 0.00 0.00 4.94
432 433 0.316937 GTGTGATTGTGTGTGGCGTG 60.317 55.000 0.00 0.00 0.00 5.34
433 434 0.746204 TGTGTGATTGTGTGTGGCGT 60.746 50.000 0.00 0.00 0.00 5.68
434 435 0.316937 GTGTGTGATTGTGTGTGGCG 60.317 55.000 0.00 0.00 0.00 5.69
435 436 0.316937 CGTGTGTGATTGTGTGTGGC 60.317 55.000 0.00 0.00 0.00 5.01
436 437 1.013596 ACGTGTGTGATTGTGTGTGG 58.986 50.000 0.00 0.00 0.00 4.17
448 449 4.339429 CATTTTCGTCTTTTCACGTGTGT 58.661 39.130 16.51 0.00 40.79 3.72
449 450 3.177643 GCATTTTCGTCTTTTCACGTGTG 59.822 43.478 16.51 2.45 40.79 3.82
450 451 3.359654 GCATTTTCGTCTTTTCACGTGT 58.640 40.909 16.51 0.00 40.79 4.49
451 452 2.719046 GGCATTTTCGTCTTTTCACGTG 59.281 45.455 9.94 9.94 40.79 4.49
452 453 2.287368 GGGCATTTTCGTCTTTTCACGT 60.287 45.455 0.00 0.00 40.79 4.49
453 454 2.031157 AGGGCATTTTCGTCTTTTCACG 60.031 45.455 0.00 0.00 41.36 4.35
454 455 3.565516 GAGGGCATTTTCGTCTTTTCAC 58.434 45.455 0.00 0.00 0.00 3.18
455 456 2.225491 CGAGGGCATTTTCGTCTTTTCA 59.775 45.455 0.00 0.00 32.44 2.69
456 457 2.414161 CCGAGGGCATTTTCGTCTTTTC 60.414 50.000 0.00 0.00 35.14 2.29
457 458 1.539827 CCGAGGGCATTTTCGTCTTTT 59.460 47.619 0.00 0.00 35.14 2.27
458 459 1.165270 CCGAGGGCATTTTCGTCTTT 58.835 50.000 0.00 0.00 35.14 2.52
459 460 2.854522 CCGAGGGCATTTTCGTCTT 58.145 52.632 0.00 0.00 35.14 3.01
460 461 4.617875 CCGAGGGCATTTTCGTCT 57.382 55.556 0.00 0.00 35.14 4.18
475 476 3.726595 TTATTCTCGTGCCCCGCCG 62.727 63.158 0.00 0.00 36.19 6.46
476 477 2.178235 GTTATTCTCGTGCCCCGCC 61.178 63.158 0.00 0.00 36.19 6.13
477 478 2.522638 CGTTATTCTCGTGCCCCGC 61.523 63.158 0.00 0.00 36.19 6.13
478 479 1.881252 CCGTTATTCTCGTGCCCCG 60.881 63.158 0.00 0.00 38.13 5.73
479 480 2.178235 GCCGTTATTCTCGTGCCCC 61.178 63.158 0.00 0.00 0.00 5.80
480 481 2.522638 CGCCGTTATTCTCGTGCCC 61.523 63.158 0.00 0.00 0.00 5.36
481 482 2.522638 CCGCCGTTATTCTCGTGCC 61.523 63.158 0.00 0.00 0.00 5.01
482 483 1.808390 ACCGCCGTTATTCTCGTGC 60.808 57.895 0.00 0.00 0.00 5.34
483 484 1.418342 CCACCGCCGTTATTCTCGTG 61.418 60.000 0.00 0.00 0.00 4.35
484 485 1.153706 CCACCGCCGTTATTCTCGT 60.154 57.895 0.00 0.00 0.00 4.18
485 486 2.522638 GCCACCGCCGTTATTCTCG 61.523 63.158 0.00 0.00 0.00 4.04
486 487 1.448893 TGCCACCGCCGTTATTCTC 60.449 57.895 0.00 0.00 0.00 2.87
487 488 1.743995 GTGCCACCGCCGTTATTCT 60.744 57.895 0.00 0.00 0.00 2.40
488 489 2.789249 GTGCCACCGCCGTTATTC 59.211 61.111 0.00 0.00 0.00 1.75
489 490 3.122323 CGTGCCACCGCCGTTATT 61.122 61.111 0.00 0.00 0.00 1.40
490 491 4.071875 TCGTGCCACCGCCGTTAT 62.072 61.111 0.00 0.00 32.58 1.89
491 492 4.728102 CTCGTGCCACCGCCGTTA 62.728 66.667 0.00 0.00 32.58 3.18
495 496 3.665675 AAGATCTCGTGCCACCGCC 62.666 63.158 0.00 0.00 0.00 6.13
496 497 0.459585 TAAAGATCTCGTGCCACCGC 60.460 55.000 0.00 0.00 0.00 5.68
497 498 1.278238 GTAAAGATCTCGTGCCACCG 58.722 55.000 0.00 0.00 0.00 4.94
498 499 2.380084 TGTAAAGATCTCGTGCCACC 57.620 50.000 0.00 0.00 0.00 4.61
499 500 2.535984 CGATGTAAAGATCTCGTGCCAC 59.464 50.000 0.00 0.00 0.00 5.01
500 501 2.481276 CCGATGTAAAGATCTCGTGCCA 60.481 50.000 0.00 0.00 0.00 4.92
501 502 2.128035 CCGATGTAAAGATCTCGTGCC 58.872 52.381 0.00 0.00 0.00 5.01
502 503 2.128035 CCCGATGTAAAGATCTCGTGC 58.872 52.381 0.00 0.00 0.00 5.34
503 504 2.545952 CCCCCGATGTAAAGATCTCGTG 60.546 54.545 0.00 0.00 0.00 4.35
504 505 1.687123 CCCCCGATGTAAAGATCTCGT 59.313 52.381 0.00 0.00 0.00 4.18
505 506 2.440539 CCCCCGATGTAAAGATCTCG 57.559 55.000 0.00 0.00 0.00 4.04
521 522 1.893137 GGAATGAACAGTTTCACCCCC 59.107 52.381 0.00 0.00 44.66 5.40
522 523 2.876581 AGGAATGAACAGTTTCACCCC 58.123 47.619 0.00 0.00 44.66 4.95
523 524 4.937201 AAAGGAATGAACAGTTTCACCC 57.063 40.909 0.00 0.00 44.66 4.61
524 525 6.039382 ACACTAAAGGAATGAACAGTTTCACC 59.961 38.462 0.00 0.00 44.66 4.02
525 526 7.012421 AGACACTAAAGGAATGAACAGTTTCAC 59.988 37.037 0.00 0.00 44.66 3.18
526 527 7.054124 AGACACTAAAGGAATGAACAGTTTCA 58.946 34.615 0.00 0.00 45.93 2.69
527 528 7.226720 TGAGACACTAAAGGAATGAACAGTTTC 59.773 37.037 0.00 0.00 0.00 2.78
528 529 7.054124 TGAGACACTAAAGGAATGAACAGTTT 58.946 34.615 0.00 0.00 0.00 2.66
529 530 6.591935 TGAGACACTAAAGGAATGAACAGTT 58.408 36.000 0.00 0.00 0.00 3.16
530 531 6.174720 TGAGACACTAAAGGAATGAACAGT 57.825 37.500 0.00 0.00 0.00 3.55
531 532 7.102346 AGATGAGACACTAAAGGAATGAACAG 58.898 38.462 0.00 0.00 0.00 3.16
532 533 7.009179 AGATGAGACACTAAAGGAATGAACA 57.991 36.000 0.00 0.00 0.00 3.18
533 534 7.201478 CGAAGATGAGACACTAAAGGAATGAAC 60.201 40.741 0.00 0.00 0.00 3.18
534 535 6.813649 CGAAGATGAGACACTAAAGGAATGAA 59.186 38.462 0.00 0.00 0.00 2.57
535 536 6.152831 TCGAAGATGAGACACTAAAGGAATGA 59.847 38.462 0.00 0.00 0.00 2.57
536 537 6.333416 TCGAAGATGAGACACTAAAGGAATG 58.667 40.000 0.00 0.00 0.00 2.67
537 538 6.531503 TCGAAGATGAGACACTAAAGGAAT 57.468 37.500 0.00 0.00 0.00 3.01
538 539 5.977489 TCGAAGATGAGACACTAAAGGAA 57.023 39.130 0.00 0.00 0.00 3.36
539 540 5.067936 GGATCGAAGATGAGACACTAAAGGA 59.932 44.000 0.00 0.00 45.12 3.36
540 541 5.285651 GGATCGAAGATGAGACACTAAAGG 58.714 45.833 0.00 0.00 45.12 3.11
541 542 4.973051 CGGATCGAAGATGAGACACTAAAG 59.027 45.833 0.00 0.00 45.12 1.85
542 543 4.638865 TCGGATCGAAGATGAGACACTAAA 59.361 41.667 0.00 0.00 45.12 1.85
543 544 4.035324 GTCGGATCGAAGATGAGACACTAA 59.965 45.833 0.00 0.00 45.12 2.24
544 545 3.560481 GTCGGATCGAAGATGAGACACTA 59.440 47.826 0.00 0.00 45.12 2.74
545 546 2.356382 GTCGGATCGAAGATGAGACACT 59.644 50.000 0.00 0.00 45.12 3.55
546 547 2.722071 GTCGGATCGAAGATGAGACAC 58.278 52.381 0.00 0.00 45.12 3.67
547 548 1.330829 CGTCGGATCGAAGATGAGACA 59.669 52.381 0.00 0.00 45.12 3.41
548 549 1.334239 CCGTCGGATCGAAGATGAGAC 60.334 57.143 4.91 4.06 45.12 3.36
549 550 0.945099 CCGTCGGATCGAAGATGAGA 59.055 55.000 4.91 0.00 45.12 3.27
550 551 0.661780 GCCGTCGGATCGAAGATGAG 60.662 60.000 17.49 2.71 45.12 2.90
551 552 1.359117 GCCGTCGGATCGAAGATGA 59.641 57.895 17.49 0.00 45.12 2.92
552 553 1.661821 GGCCGTCGGATCGAAGATG 60.662 63.158 17.49 0.00 45.12 2.90
553 554 2.728817 GGCCGTCGGATCGAAGAT 59.271 61.111 17.49 0.00 45.12 2.40
554 555 3.524606 GGGCCGTCGGATCGAAGA 61.525 66.667 17.49 0.00 45.75 2.87
555 556 3.774959 CTGGGCCGTCGGATCGAAG 62.775 68.421 17.49 4.01 37.72 3.79
556 557 3.833645 CTGGGCCGTCGGATCGAA 61.834 66.667 17.49 0.00 37.72 3.71
559 560 4.593864 GAGCTGGGCCGTCGGATC 62.594 72.222 17.49 6.39 0.00 3.36
563 564 4.821589 GAAGGAGCTGGGCCGTCG 62.822 72.222 0.00 0.00 0.00 5.12
564 565 4.475135 GGAAGGAGCTGGGCCGTC 62.475 72.222 0.00 0.00 33.82 4.79
566 567 4.785453 GTGGAAGGAGCTGGGCCG 62.785 72.222 0.00 0.00 0.00 6.13
567 568 4.432741 GGTGGAAGGAGCTGGGCC 62.433 72.222 0.00 0.00 0.00 5.80
568 569 3.334054 AGGTGGAAGGAGCTGGGC 61.334 66.667 0.00 0.00 0.00 5.36
569 570 0.325671 TAGAGGTGGAAGGAGCTGGG 60.326 60.000 0.00 0.00 0.00 4.45
570 571 1.118838 CTAGAGGTGGAAGGAGCTGG 58.881 60.000 0.00 0.00 0.00 4.85
571 572 2.151502 TCTAGAGGTGGAAGGAGCTG 57.848 55.000 0.00 0.00 0.00 4.24
572 573 2.425683 GGATCTAGAGGTGGAAGGAGCT 60.426 54.545 0.00 0.00 0.00 4.09
573 574 1.967779 GGATCTAGAGGTGGAAGGAGC 59.032 57.143 0.00 0.00 0.00 4.70
574 575 2.158593 TCGGATCTAGAGGTGGAAGGAG 60.159 54.545 0.00 0.00 0.00 3.69
575 576 1.850998 TCGGATCTAGAGGTGGAAGGA 59.149 52.381 0.00 0.00 0.00 3.36
576 577 1.957877 GTCGGATCTAGAGGTGGAAGG 59.042 57.143 0.00 0.00 0.00 3.46
577 578 1.604755 CGTCGGATCTAGAGGTGGAAG 59.395 57.143 0.00 0.00 0.00 3.46
578 579 1.676746 CGTCGGATCTAGAGGTGGAA 58.323 55.000 0.00 0.00 0.00 3.53
579 580 0.818445 GCGTCGGATCTAGAGGTGGA 60.818 60.000 0.00 0.00 0.00 4.02
580 581 1.655329 GCGTCGGATCTAGAGGTGG 59.345 63.158 0.00 0.00 0.00 4.61
581 582 1.655329 GGCGTCGGATCTAGAGGTG 59.345 63.158 0.00 0.00 0.00 4.00
582 583 1.528776 GGGCGTCGGATCTAGAGGT 60.529 63.158 0.00 0.00 0.00 3.85
583 584 1.519751 CTGGGCGTCGGATCTAGAGG 61.520 65.000 0.00 0.06 0.00 3.69
584 585 0.535328 TCTGGGCGTCGGATCTAGAG 60.535 60.000 0.00 0.00 0.00 2.43
585 586 0.106868 TTCTGGGCGTCGGATCTAGA 60.107 55.000 0.00 0.00 0.00 2.43
586 587 0.962489 ATTCTGGGCGTCGGATCTAG 59.038 55.000 0.00 0.00 0.00 2.43
587 588 1.340248 GAATTCTGGGCGTCGGATCTA 59.660 52.381 0.00 0.00 0.00 1.98
588 589 0.105039 GAATTCTGGGCGTCGGATCT 59.895 55.000 0.00 0.00 0.00 2.75
589 590 0.880718 GGAATTCTGGGCGTCGGATC 60.881 60.000 5.23 0.00 0.00 3.36
590 591 1.146263 GGAATTCTGGGCGTCGGAT 59.854 57.895 5.23 0.00 0.00 4.18
591 592 1.622607 ATGGAATTCTGGGCGTCGGA 61.623 55.000 5.23 0.00 0.00 4.55
592 593 0.748005 AATGGAATTCTGGGCGTCGG 60.748 55.000 5.23 0.00 0.00 4.79
593 594 1.948104 TAATGGAATTCTGGGCGTCG 58.052 50.000 5.23 0.00 37.87 5.12
594 595 2.033424 GCTTAATGGAATTCTGGGCGTC 59.967 50.000 5.23 0.00 37.87 5.19
595 596 2.024414 GCTTAATGGAATTCTGGGCGT 58.976 47.619 5.23 0.00 37.87 5.68
596 597 2.023673 TGCTTAATGGAATTCTGGGCG 58.976 47.619 5.23 0.00 37.87 6.13
597 598 3.026694 ACTGCTTAATGGAATTCTGGGC 58.973 45.455 5.23 3.02 37.87 5.36
598 599 4.201950 CGAACTGCTTAATGGAATTCTGGG 60.202 45.833 5.23 0.00 37.87 4.45
599 600 4.635765 TCGAACTGCTTAATGGAATTCTGG 59.364 41.667 5.23 0.00 37.87 3.86
600 601 5.801350 TCGAACTGCTTAATGGAATTCTG 57.199 39.130 5.23 0.00 37.87 3.02
601 602 6.259608 CAGATCGAACTGCTTAATGGAATTCT 59.740 38.462 9.94 0.00 37.87 2.40
602 603 6.258727 TCAGATCGAACTGCTTAATGGAATTC 59.741 38.462 17.19 0.00 36.47 2.17
603 604 6.037610 GTCAGATCGAACTGCTTAATGGAATT 59.962 38.462 17.19 0.00 37.80 2.17
604 605 5.525378 GTCAGATCGAACTGCTTAATGGAAT 59.475 40.000 17.19 0.00 37.75 3.01
605 606 4.870426 GTCAGATCGAACTGCTTAATGGAA 59.130 41.667 17.19 0.00 37.75 3.53
606 607 4.433615 GTCAGATCGAACTGCTTAATGGA 58.566 43.478 17.19 0.00 37.75 3.41
607 608 3.243877 CGTCAGATCGAACTGCTTAATGG 59.756 47.826 17.19 0.00 37.75 3.16
608 609 3.243877 CCGTCAGATCGAACTGCTTAATG 59.756 47.826 17.19 6.15 37.75 1.90
609 610 3.448686 CCGTCAGATCGAACTGCTTAAT 58.551 45.455 17.19 0.00 37.75 1.40
610 611 2.876091 CCGTCAGATCGAACTGCTTAA 58.124 47.619 17.19 0.00 37.75 1.85
611 612 1.469251 GCCGTCAGATCGAACTGCTTA 60.469 52.381 17.19 0.00 37.75 3.09
612 613 0.737715 GCCGTCAGATCGAACTGCTT 60.738 55.000 17.19 0.00 37.75 3.91
613 614 1.153745 GCCGTCAGATCGAACTGCT 60.154 57.895 17.19 0.00 37.75 4.24
614 615 2.167861 GGCCGTCAGATCGAACTGC 61.168 63.158 17.19 11.41 37.75 4.40
615 616 1.874019 CGGCCGTCAGATCGAACTG 60.874 63.158 19.50 16.00 39.02 3.16
616 617 1.994507 CTCGGCCGTCAGATCGAACT 61.995 60.000 27.15 0.00 0.00 3.01
617 618 1.586564 CTCGGCCGTCAGATCGAAC 60.587 63.158 27.15 0.00 0.00 3.95
618 619 1.715862 CTCTCGGCCGTCAGATCGAA 61.716 60.000 27.15 0.17 0.00 3.71
619 620 2.124860 TCTCGGCCGTCAGATCGA 60.125 61.111 27.15 8.41 0.00 3.59
620 621 2.329690 CTCTCGGCCGTCAGATCG 59.670 66.667 27.15 6.87 0.00 3.69
621 622 1.357334 GACTCTCGGCCGTCAGATC 59.643 63.158 27.15 15.64 0.00 2.75
622 623 2.473760 CGACTCTCGGCCGTCAGAT 61.474 63.158 27.15 11.22 36.00 2.90
623 624 3.125573 CGACTCTCGGCCGTCAGA 61.126 66.667 27.15 20.39 36.00 3.27
624 625 4.838486 GCGACTCTCGGCCGTCAG 62.838 72.222 27.15 23.04 40.84 3.51
625 626 3.963687 TAGCGACTCTCGGCCGTCA 62.964 63.158 27.15 11.99 40.84 4.35
626 627 2.061182 ATTAGCGACTCTCGGCCGTC 62.061 60.000 27.15 14.54 40.84 4.79
627 628 2.061182 GATTAGCGACTCTCGGCCGT 62.061 60.000 27.15 5.04 40.84 5.68
628 629 1.370657 GATTAGCGACTCTCGGCCG 60.371 63.158 22.12 22.12 40.84 6.13
629 630 0.039888 GAGATTAGCGACTCTCGGCC 60.040 60.000 0.00 0.00 40.84 6.13
630 631 0.948678 AGAGATTAGCGACTCTCGGC 59.051 55.000 8.23 0.00 42.21 5.54
631 632 4.059511 TCTTAGAGATTAGCGACTCTCGG 58.940 47.826 8.23 4.35 42.21 4.63
632 633 4.377022 GCTCTTAGAGATTAGCGACTCTCG 60.377 50.000 14.14 0.00 42.21 4.04
633 634 4.513692 TGCTCTTAGAGATTAGCGACTCTC 59.486 45.833 14.14 6.13 42.44 3.20
634 635 4.456535 TGCTCTTAGAGATTAGCGACTCT 58.543 43.478 14.14 0.00 44.27 3.24
635 636 4.783242 CTGCTCTTAGAGATTAGCGACTC 58.217 47.826 14.14 0.00 37.80 3.36
636 637 3.004315 GCTGCTCTTAGAGATTAGCGACT 59.996 47.826 14.14 0.00 37.80 4.18
637 638 3.004315 AGCTGCTCTTAGAGATTAGCGAC 59.996 47.826 14.14 0.00 37.56 5.19
638 639 3.218453 AGCTGCTCTTAGAGATTAGCGA 58.782 45.455 14.14 0.00 37.56 4.93
639 640 3.253188 AGAGCTGCTCTTAGAGATTAGCG 59.747 47.826 25.80 0.00 37.60 4.26
640 641 4.853924 AGAGCTGCTCTTAGAGATTAGC 57.146 45.455 25.80 17.12 37.60 3.09
641 642 5.106157 GGCTAGAGCTGCTCTTAGAGATTAG 60.106 48.000 34.42 23.33 41.50 1.73
642 643 4.764823 GGCTAGAGCTGCTCTTAGAGATTA 59.235 45.833 34.42 14.90 41.50 1.75
643 644 3.573967 GGCTAGAGCTGCTCTTAGAGATT 59.426 47.826 34.42 12.71 41.50 2.40
644 645 3.157087 GGCTAGAGCTGCTCTTAGAGAT 58.843 50.000 34.42 13.43 41.50 2.75
645 646 2.582052 GGCTAGAGCTGCTCTTAGAGA 58.418 52.381 34.42 17.01 41.50 3.10
646 647 1.613437 GGGCTAGAGCTGCTCTTAGAG 59.387 57.143 34.42 25.95 41.50 2.43
647 648 1.698506 GGGCTAGAGCTGCTCTTAGA 58.301 55.000 34.42 17.73 41.50 2.10
648 649 0.678950 GGGGCTAGAGCTGCTCTTAG 59.321 60.000 34.42 26.66 41.50 2.18
649 650 0.760945 GGGGGCTAGAGCTGCTCTTA 60.761 60.000 34.42 19.55 41.50 2.10
650 651 2.069430 GGGGGCTAGAGCTGCTCTT 61.069 63.158 34.42 19.48 41.50 2.85
651 652 2.445654 GGGGGCTAGAGCTGCTCT 60.446 66.667 32.31 32.31 43.83 4.09
665 666 0.400594 AGAAACAAGAACGGAGGGGG 59.599 55.000 0.00 0.00 0.00 5.40
666 667 1.523758 CAGAAACAAGAACGGAGGGG 58.476 55.000 0.00 0.00 0.00 4.79
667 668 1.071699 TCCAGAAACAAGAACGGAGGG 59.928 52.381 0.00 0.00 0.00 4.30
668 669 2.543777 TCCAGAAACAAGAACGGAGG 57.456 50.000 0.00 0.00 0.00 4.30
669 670 4.319177 AGAATCCAGAAACAAGAACGGAG 58.681 43.478 0.00 0.00 0.00 4.63
670 671 4.315803 GAGAATCCAGAAACAAGAACGGA 58.684 43.478 0.00 0.00 0.00 4.69
671 672 3.123621 CGAGAATCCAGAAACAAGAACGG 59.876 47.826 0.00 0.00 0.00 4.44
672 673 3.741344 ACGAGAATCCAGAAACAAGAACG 59.259 43.478 0.00 0.00 0.00 3.95
673 674 4.143305 CGACGAGAATCCAGAAACAAGAAC 60.143 45.833 0.00 0.00 0.00 3.01
674 675 3.987868 CGACGAGAATCCAGAAACAAGAA 59.012 43.478 0.00 0.00 0.00 2.52
675 676 3.575630 CGACGAGAATCCAGAAACAAGA 58.424 45.455 0.00 0.00 0.00 3.02
676 677 2.092838 GCGACGAGAATCCAGAAACAAG 59.907 50.000 0.00 0.00 0.00 3.16
677 678 2.066262 GCGACGAGAATCCAGAAACAA 58.934 47.619 0.00 0.00 0.00 2.83
678 679 1.671850 GGCGACGAGAATCCAGAAACA 60.672 52.381 0.00 0.00 0.00 2.83
679 680 1.000145 GGCGACGAGAATCCAGAAAC 59.000 55.000 0.00 0.00 0.00 2.78
680 681 0.108329 GGGCGACGAGAATCCAGAAA 60.108 55.000 0.00 0.00 0.00 2.52
681 682 0.970937 AGGGCGACGAGAATCCAGAA 60.971 55.000 0.00 0.00 0.00 3.02
682 683 1.379977 AGGGCGACGAGAATCCAGA 60.380 57.895 0.00 0.00 0.00 3.86
683 684 1.227089 CAGGGCGACGAGAATCCAG 60.227 63.158 0.00 0.00 0.00 3.86
684 685 2.721167 CCAGGGCGACGAGAATCCA 61.721 63.158 0.00 0.00 0.00 3.41
685 686 2.107141 CCAGGGCGACGAGAATCC 59.893 66.667 0.00 0.00 0.00 3.01
686 687 2.586357 GCCAGGGCGACGAGAATC 60.586 66.667 0.00 0.00 0.00 2.52
700 701 1.229209 ACTCGGAAGGGAGAAGCCA 60.229 57.895 0.00 0.00 38.95 4.75
806 807 3.056328 GAAGGCGAGGGTGTTGGC 61.056 66.667 0.00 0.00 35.16 4.52
901 908 3.524789 ACCTCAGATGTCAATCCCAATGA 59.475 43.478 0.00 0.00 32.77 2.57
938 945 3.261897 AGGTCAGTGGGATTTCACTACTG 59.738 47.826 2.99 2.99 45.24 2.74
1142 1152 2.655577 CGTACGAAACAGTCAAACAGCG 60.656 50.000 10.44 0.00 0.00 5.18
1159 1169 4.501071 TCCTTGACAAGCTAATTCCGTAC 58.499 43.478 9.85 0.00 0.00 3.67
1266 1289 0.172578 TGTGCCATCCTACGACGAAG 59.827 55.000 0.00 0.00 0.00 3.79
1290 1313 7.531716 TGGCGTATGTGAATAAAGGTAAAAAG 58.468 34.615 0.00 0.00 0.00 2.27
1291 1314 7.450124 TGGCGTATGTGAATAAAGGTAAAAA 57.550 32.000 0.00 0.00 0.00 1.94
1295 1318 5.736813 AGTTGGCGTATGTGAATAAAGGTA 58.263 37.500 0.00 0.00 0.00 3.08
1296 1319 4.585879 AGTTGGCGTATGTGAATAAAGGT 58.414 39.130 0.00 0.00 0.00 3.50
1297 1320 4.876107 AGAGTTGGCGTATGTGAATAAAGG 59.124 41.667 0.00 0.00 0.00 3.11
1298 1321 5.351465 ACAGAGTTGGCGTATGTGAATAAAG 59.649 40.000 0.00 0.00 0.00 1.85
1302 1328 3.334583 ACAGAGTTGGCGTATGTGAAT 57.665 42.857 0.00 0.00 0.00 2.57
1305 1331 1.464608 CCAACAGAGTTGGCGTATGTG 59.535 52.381 15.19 0.00 32.18 3.21
1306 1332 1.071699 ACCAACAGAGTTGGCGTATGT 59.928 47.619 24.56 5.42 43.23 2.29
1310 1336 1.524961 TGACCAACAGAGTTGGCGT 59.475 52.632 24.56 9.79 43.23 5.68
1332 1358 2.224161 ACAAGAGAGCACAGAAGGTCAC 60.224 50.000 0.00 0.00 38.44 3.67
1491 1517 1.381735 GGGGCCCCTTTTCATGAGG 60.382 63.158 35.49 0.00 0.00 3.86
1558 1585 9.677567 CTATCTTCTTCCGAAAAGATTAGAGAG 57.322 37.037 16.74 8.30 41.33 3.20
1569 1596 8.897872 AACAAGTTAACTATCTTCTTCCGAAA 57.102 30.769 8.92 0.00 0.00 3.46
1776 1807 4.037446 TCAAAGTGGAGCAATGGTTAACAC 59.963 41.667 8.10 7.45 0.00 3.32
1843 1880 6.764308 AATTACATGATTCCTCCAACTGTG 57.236 37.500 0.00 0.00 0.00 3.66
1878 1916 7.201875 GGACTGAATTTCCCTTCACTGTAAAAA 60.202 37.037 0.00 0.00 31.98 1.94
1919 1957 9.489084 CAACGAAATCAATACCCTAGATGAATA 57.511 33.333 0.00 0.00 0.00 1.75
1975 2013 8.811017 AGAGACTCTTTTCATGAGAAGACAATA 58.189 33.333 21.42 4.73 34.71 1.90
2048 2088 2.296471 CTGACCGACCCATGGATAGTAC 59.704 54.545 15.22 1.11 0.00 2.73
2050 2090 1.414158 CTGACCGACCCATGGATAGT 58.586 55.000 15.22 1.74 0.00 2.12
2306 2350 7.289310 TCAGCATGATCTACCCATCATTTTTA 58.711 34.615 0.00 0.00 42.56 1.52
2404 2448 2.039746 TGTGATTCCCCCAACTGTACAG 59.960 50.000 21.44 21.44 0.00 2.74
2448 2492 8.734386 GTGGAGATGAATGAAATCACTTTACTT 58.266 33.333 0.00 0.00 30.82 2.24
2666 2710 5.652452 TCTGATCCTGACGACAGAAAGATAA 59.348 40.000 16.58 3.44 46.03 1.75
2667 2711 5.193679 TCTGATCCTGACGACAGAAAGATA 58.806 41.667 16.58 0.00 46.03 1.98
2678 2722 3.005554 ACAATTGCTTCTGATCCTGACG 58.994 45.455 5.05 0.00 0.00 4.35
2796 2842 4.547859 CAGGATGGTGTAGGCTGC 57.452 61.111 0.00 0.00 0.00 5.25
3261 3310 5.415701 TGAGGTATCAAAATTCAGGTTGAGC 59.584 40.000 0.00 0.00 37.19 4.26
3282 3331 3.046390 GCGTGGAGATTATCGAACTGAG 58.954 50.000 0.00 0.00 0.00 3.35
3303 3354 7.050281 AGTGACGATTATTCAAAAGAAGACG 57.950 36.000 0.00 0.00 0.00 4.18
3370 3421 2.364970 TCCAGTTGAATTGCCTGGTTTG 59.635 45.455 12.14 0.00 44.92 2.93
3415 3466 2.887568 GACATGAGTGAGGCGGCG 60.888 66.667 0.51 0.51 0.00 6.46
3418 3469 1.073964 CACTTGACATGAGTGAGGCG 58.926 55.000 7.13 0.00 45.72 5.52
3424 3475 1.815408 GCACCACCACTTGACATGAGT 60.815 52.381 0.00 0.00 0.00 3.41
3476 3527 2.831742 CCAGCATGCCGCCTGAAT 60.832 61.111 15.66 0.00 44.04 2.57
3581 3632 6.262273 AGTGACAACGATACATTTTTCCAACT 59.738 34.615 0.00 0.00 0.00 3.16
3592 3643 3.478857 AAACCCAGTGACAACGATACA 57.521 42.857 0.00 0.00 0.00 2.29
3597 3648 2.931512 ACAAAAACCCAGTGACAACG 57.068 45.000 0.00 0.00 0.00 4.10
3598 3649 6.103330 ACAATTACAAAAACCCAGTGACAAC 58.897 36.000 0.00 0.00 0.00 3.32
3602 3653 9.575868 TCTTATACAATTACAAAAACCCAGTGA 57.424 29.630 0.00 0.00 0.00 3.41
3636 3743 1.003233 GATAAGCCGGGGAGATGCC 60.003 63.158 2.18 0.00 0.00 4.40
3637 3744 1.267121 TAGATAAGCCGGGGAGATGC 58.733 55.000 2.18 0.00 0.00 3.91
3683 3790 7.939588 GTGGGCCTAAATATGAAAAGAGACTAT 59.060 37.037 4.53 0.00 0.00 2.12
3684 3791 7.092623 TGTGGGCCTAAATATGAAAAGAGACTA 60.093 37.037 4.53 0.00 0.00 2.59
3687 3794 6.073447 TGTGGGCCTAAATATGAAAAGAGA 57.927 37.500 4.53 0.00 0.00 3.10
3688 3795 6.966534 ATGTGGGCCTAAATATGAAAAGAG 57.033 37.500 4.53 0.00 0.00 2.85
3689 3796 6.667414 ACAATGTGGGCCTAAATATGAAAAGA 59.333 34.615 4.53 0.00 0.00 2.52
3691 3798 6.865834 ACAATGTGGGCCTAAATATGAAAA 57.134 33.333 4.53 0.00 0.00 2.29
3692 3799 6.865834 AACAATGTGGGCCTAAATATGAAA 57.134 33.333 4.53 0.00 0.00 2.69
3693 3800 6.212388 ACAAACAATGTGGGCCTAAATATGAA 59.788 34.615 4.53 0.00 41.93 2.57
3694 3801 5.719085 ACAAACAATGTGGGCCTAAATATGA 59.281 36.000 4.53 0.00 41.93 2.15
3695 3802 5.976458 ACAAACAATGTGGGCCTAAATATG 58.024 37.500 4.53 1.33 41.93 1.78
3697 3804 6.426646 AAACAAACAATGTGGGCCTAAATA 57.573 33.333 4.53 0.00 42.99 1.40
3698 3805 4.972751 AACAAACAATGTGGGCCTAAAT 57.027 36.364 4.53 0.00 42.99 1.40
3699 3806 4.762289 AAACAAACAATGTGGGCCTAAA 57.238 36.364 4.53 0.00 42.99 1.85
3700 3807 4.039366 GGTAAACAAACAATGTGGGCCTAA 59.961 41.667 4.53 0.00 42.99 2.69
3701 3808 3.574826 GGTAAACAAACAATGTGGGCCTA 59.425 43.478 4.53 0.00 42.99 3.93
3703 3810 2.103263 TGGTAAACAAACAATGTGGGCC 59.897 45.455 0.00 0.00 42.99 5.80
3704 3811 3.460857 TGGTAAACAAACAATGTGGGC 57.539 42.857 0.00 0.00 42.99 5.36
3705 3812 7.213678 AGTAAATGGTAAACAAACAATGTGGG 58.786 34.615 0.00 0.00 42.99 4.61
3706 3813 8.655651 AAGTAAATGGTAAACAAACAATGTGG 57.344 30.769 0.00 0.00 42.99 4.17
3707 3814 9.913451 CAAAGTAAATGGTAAACAAACAATGTG 57.087 29.630 0.00 0.00 42.99 3.21
3708 3815 9.660180 ACAAAGTAAATGGTAAACAAACAATGT 57.340 25.926 0.00 0.00 46.82 2.71
3732 3853 7.231317 ACCTTTGCTAATCTCAATTCTCAAACA 59.769 33.333 0.00 0.00 30.14 2.83
3743 3864 4.836825 CTTCCTCACCTTTGCTAATCTCA 58.163 43.478 0.00 0.00 0.00 3.27
3745 3866 3.615155 GCTTCCTCACCTTTGCTAATCT 58.385 45.455 0.00 0.00 0.00 2.40
3746 3867 2.685388 GGCTTCCTCACCTTTGCTAATC 59.315 50.000 0.00 0.00 0.00 1.75
3747 3868 2.041620 TGGCTTCCTCACCTTTGCTAAT 59.958 45.455 0.00 0.00 0.00 1.73
3748 3869 1.423541 TGGCTTCCTCACCTTTGCTAA 59.576 47.619 0.00 0.00 0.00 3.09
3749 3870 1.064003 TGGCTTCCTCACCTTTGCTA 58.936 50.000 0.00 0.00 0.00 3.49
3750 3871 0.185901 TTGGCTTCCTCACCTTTGCT 59.814 50.000 0.00 0.00 0.00 3.91
3751 3872 1.000171 CTTTGGCTTCCTCACCTTTGC 60.000 52.381 0.00 0.00 0.00 3.68
3752 3873 2.586425 TCTTTGGCTTCCTCACCTTTG 58.414 47.619 0.00 0.00 0.00 2.77
3760 3881 5.243954 GGAAATAACTGTTCTTTGGCTTCCT 59.756 40.000 8.40 0.00 0.00 3.36
3761 3882 5.243954 AGGAAATAACTGTTCTTTGGCTTCC 59.756 40.000 8.40 4.07 0.00 3.46
3784 3907 4.455606 ACAACCTGTTCTTTCCTCTCAAG 58.544 43.478 0.00 0.00 0.00 3.02
3789 3912 5.324784 ACAAAACAACCTGTTCTTTCCTC 57.675 39.130 0.00 0.00 40.14 3.71
3824 3947 7.374272 CCCAACCAAAACAAATCAAACTTTTT 58.626 30.769 0.00 0.00 0.00 1.94
3829 3956 4.095632 CACCCCAACCAAAACAAATCAAAC 59.904 41.667 0.00 0.00 0.00 2.93
3839 3966 1.306141 TGGTGCACCCCAACCAAAA 60.306 52.632 32.62 8.13 34.29 2.44
3870 3997 1.210155 GTCGCTTGGATGTTGCACC 59.790 57.895 0.00 0.00 0.00 5.01
3878 4005 2.487934 GCTCATATGTGTCGCTTGGAT 58.512 47.619 1.90 0.00 0.00 3.41
3879 4006 1.473257 GGCTCATATGTGTCGCTTGGA 60.473 52.381 1.90 0.00 0.00 3.53
3883 4010 1.337384 TGGGGCTCATATGTGTCGCT 61.337 55.000 21.97 0.00 0.00 4.93
3889 4016 1.150081 GCTGCTGGGGCTCATATGT 59.850 57.895 1.90 0.00 39.59 2.29
3893 4020 2.044252 CTTGCTGCTGGGGCTCAT 60.044 61.111 0.00 0.00 39.59 2.90
3904 4031 2.005451 GTCCATCACAGTAGCTTGCTG 58.995 52.381 14.13 14.13 39.67 4.41
3964 4094 8.835734 AGTTTAATATCTGATATGTGGGCCATA 58.164 33.333 10.70 7.76 40.27 2.74
4033 4163 4.670221 GCAGCGAAAGAAGTCATACCTTTG 60.670 45.833 0.00 0.00 31.06 2.77
4044 4174 2.694760 GGCAGGGCAGCGAAAGAAG 61.695 63.158 0.00 0.00 34.64 2.85
4067 4197 2.169978 AGCCGGGAGAGGTGTATAAAAC 59.830 50.000 2.18 0.00 0.00 2.43
4138 4268 2.369394 CCCTGCCTCGCTTATCTTTTT 58.631 47.619 0.00 0.00 0.00 1.94
4139 4269 2.019156 GCCCTGCCTCGCTTATCTTTT 61.019 52.381 0.00 0.00 0.00 2.27
4140 4270 0.464554 GCCCTGCCTCGCTTATCTTT 60.465 55.000 0.00 0.00 0.00 2.52
4141 4271 1.147153 GCCCTGCCTCGCTTATCTT 59.853 57.895 0.00 0.00 0.00 2.40
4143 4273 1.596477 CTGCCCTGCCTCGCTTATC 60.596 63.158 0.00 0.00 0.00 1.75
4144 4274 2.507944 CTGCCCTGCCTCGCTTAT 59.492 61.111 0.00 0.00 0.00 1.73
4145 4275 4.473520 GCTGCCCTGCCTCGCTTA 62.474 66.667 0.00 0.00 0.00 3.09
4150 4280 3.130160 CTTTCGCTGCCCTGCCTC 61.130 66.667 0.00 0.00 0.00 4.70
4151 4281 4.729918 CCTTTCGCTGCCCTGCCT 62.730 66.667 0.00 0.00 0.00 4.75
4152 4282 3.622060 TACCTTTCGCTGCCCTGCC 62.622 63.158 0.00 0.00 0.00 4.85
4153 4283 1.648467 CTTACCTTTCGCTGCCCTGC 61.648 60.000 0.00 0.00 0.00 4.85
4155 4285 1.377333 GCTTACCTTTCGCTGCCCT 60.377 57.895 0.00 0.00 0.00 5.19
4157 4287 2.033194 ACGCTTACCTTTCGCTGCC 61.033 57.895 0.00 0.00 0.00 4.85
4159 4289 1.654105 CTACACGCTTACCTTTCGCTG 59.346 52.381 0.00 0.00 0.00 5.18
4160 4290 1.271656 ACTACACGCTTACCTTTCGCT 59.728 47.619 0.00 0.00 0.00 4.93
4162 4292 2.669364 ACACTACACGCTTACCTTTCG 58.331 47.619 0.00 0.00 0.00 3.46
4163 4293 4.053295 TCAACACTACACGCTTACCTTTC 58.947 43.478 0.00 0.00 0.00 2.62
4164 4294 3.805971 GTCAACACTACACGCTTACCTTT 59.194 43.478 0.00 0.00 0.00 3.11
4166 4296 2.606308 CGTCAACACTACACGCTTACCT 60.606 50.000 0.00 0.00 0.00 3.08
4168 4298 1.717645 CCGTCAACACTACACGCTTAC 59.282 52.381 0.00 0.00 32.03 2.34
4169 4299 1.931709 GCCGTCAACACTACACGCTTA 60.932 52.381 0.00 0.00 32.03 3.09
4170 4300 1.219522 GCCGTCAACACTACACGCTT 61.220 55.000 0.00 0.00 32.03 4.68
4174 4304 1.007336 CGAGGCCGTCAACACTACAC 61.007 60.000 0.00 0.00 0.00 2.90
4175 4305 1.287815 CGAGGCCGTCAACACTACA 59.712 57.895 0.00 0.00 0.00 2.74
4193 4323 3.471399 GAGGCCGTTACTCGCAAC 58.529 61.111 0.00 0.00 38.35 4.17
4255 4401 2.987547 TCCGTTTCCTCCGACGCT 60.988 61.111 0.00 0.00 37.91 5.07
4256 4402 2.808321 GTCCGTTTCCTCCGACGC 60.808 66.667 0.00 0.00 37.91 5.19
4257 4403 2.126189 GGTCCGTTTCCTCCGACG 60.126 66.667 0.00 0.00 38.90 5.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.