Multiple sequence alignment - TraesCS6B01G194600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G194600 chr6B 100.000 4373 0 0 1 4373 229523832 229519460 0.000000e+00 8076.0
1 TraesCS6B01G194600 chr6B 87.654 81 9 1 1539 1619 396438741 396438662 4.660000e-15 93.5
2 TraesCS6B01G194600 chr6D 96.536 1732 30 10 1901 3632 131940178 131938477 0.000000e+00 2839.0
3 TraesCS6B01G194600 chr6D 95.991 873 31 4 998 1867 131941049 131940178 0.000000e+00 1415.0
4 TraesCS6B01G194600 chr6D 89.702 738 62 11 196 930 131942113 131941387 0.000000e+00 929.0
5 TraesCS6B01G194600 chr6D 91.045 201 12 4 4106 4306 131937137 131937331 2.590000e-67 267.0
6 TraesCS6B01G194600 chr6D 94.737 152 6 2 1 152 131942251 131942102 7.310000e-58 235.0
7 TraesCS6B01G194600 chr6D 93.750 96 6 0 3929 4024 131938487 131938392 1.270000e-30 145.0
8 TraesCS6B01G194600 chr6D 86.364 88 11 1 1530 1617 58245461 58245375 1.290000e-15 95.3
9 TraesCS6B01G194600 chr6D 98.113 53 1 0 4321 4373 131937140 131937088 4.660000e-15 93.5
10 TraesCS6B01G194600 chr6D 90.909 55 1 3 3785 3839 131937390 131937340 2.180000e-08 71.3
11 TraesCS6B01G194600 chr6A 94.821 1004 35 5 2629 3632 170900911 170899925 0.000000e+00 1550.0
12 TraesCS6B01G194600 chr6A 88.824 689 45 14 878 1543 170902396 170901717 0.000000e+00 817.0
13 TraesCS6B01G194600 chr6A 93.016 315 19 2 3929 4240 170899935 170899621 1.430000e-124 457.0
14 TraesCS6B01G194600 chr6A 91.496 341 15 2 2200 2540 170901233 170900907 1.430000e-124 457.0
15 TraesCS6B01G194600 chr6A 94.583 240 13 0 1628 1867 170901722 170901483 5.340000e-99 372.0
16 TraesCS6B01G194600 chr6A 89.964 279 5 5 1901 2177 170901483 170901226 5.420000e-89 339.0
17 TraesCS6B01G194600 chr6A 92.771 166 10 2 3630 3794 574401792 574401956 5.650000e-59 239.0
18 TraesCS6B01G194600 chr6A 77.719 377 51 25 449 809 170902881 170902522 2.670000e-47 200.0
19 TraesCS6B01G194600 chr6A 96.875 64 2 0 3800 3863 170899826 170899763 1.660000e-19 108.0
20 TraesCS6B01G194600 chr6A 86.364 88 10 2 1530 1617 73562077 73561992 1.290000e-15 95.3
21 TraesCS6B01G194600 chr6A 87.097 62 8 0 3860 3921 5130645 5130706 2.180000e-08 71.3
22 TraesCS6B01G194600 chr5B 82.975 511 60 12 1049 1540 7145338 7145840 1.870000e-118 436.0
23 TraesCS6B01G194600 chr2D 86.053 380 30 8 1628 2007 166196018 166196374 1.910000e-103 387.0
24 TraesCS6B01G194600 chr2D 91.954 174 11 3 3630 3801 414562324 414562152 1.570000e-59 241.0
25 TraesCS6B01G194600 chr2D 92.708 96 7 0 1445 1540 166195925 166196020 5.900000e-29 139.0
26 TraesCS6B01G194600 chr2D 88.525 61 7 0 3861 3921 189851187 189851247 1.690000e-09 75.0
27 TraesCS6B01G194600 chr2D 97.059 34 0 1 311 344 637822810 637822778 6.110000e-04 56.5
28 TraesCS6B01G194600 chr1D 85.789 380 31 7 1628 2007 464940271 464940627 8.870000e-102 381.0
29 TraesCS6B01G194600 chr1D 92.708 96 7 0 1445 1540 464940178 464940273 5.900000e-29 139.0
30 TraesCS6B01G194600 chr2B 85.526 380 32 8 1628 2007 584822695 584822339 4.130000e-100 375.0
31 TraesCS6B01G194600 chr2B 92.929 99 7 0 1445 1543 584822788 584822690 1.270000e-30 145.0
32 TraesCS6B01G194600 chr2B 90.323 62 5 1 3860 3921 35114305 35114245 3.630000e-11 80.5
33 TraesCS6B01G194600 chr7B 89.189 259 27 1 1870 2128 92034154 92033897 5.460000e-84 322.0
34 TraesCS6B01G194600 chr4D 88.800 250 23 3 1828 2073 477309303 477309551 7.110000e-78 302.0
35 TraesCS6B01G194600 chr4D 90.323 62 6 0 3859 3920 108827213 108827152 1.010000e-11 82.4
36 TraesCS6B01G194600 chr3B 82.000 300 39 5 989 1274 548075202 548075500 1.570000e-59 241.0
37 TraesCS6B01G194600 chr7D 91.860 172 9 4 3630 3797 638390135 638389965 7.310000e-58 235.0
38 TraesCS6B01G194600 chr7D 85.484 62 7 1 3860 3921 60196272 60196213 3.650000e-06 63.9
39 TraesCS6B01G194600 chr3D 91.860 172 9 4 3630 3797 53411380 53411210 7.310000e-58 235.0
40 TraesCS6B01G194600 chr3D 87.097 62 6 1 3860 3921 42906156 42906215 7.850000e-08 69.4
41 TraesCS6B01G194600 chr3D 86.885 61 8 0 3861 3921 572759809 572759749 7.850000e-08 69.4
42 TraesCS6B01G194600 chr3A 90.805 174 14 2 3629 3801 42179531 42179359 9.460000e-57 231.0
43 TraesCS6B01G194600 chr2A 90.857 175 13 3 3629 3801 19986331 19986158 9.460000e-57 231.0
44 TraesCS6B01G194600 chr2A 90.909 176 11 5 3630 3801 60800825 60800999 9.460000e-57 231.0
45 TraesCS6B01G194600 chr2A 90.751 173 14 2 3630 3801 203281020 203281191 3.400000e-56 230.0
46 TraesCS6B01G194600 chr2A 89.873 79 7 1 1533 1611 40444905 40444828 2.780000e-17 100.0
47 TraesCS6B01G194600 chr5D 90.857 175 11 4 3630 3801 376181725 376181553 3.400000e-56 230.0
48 TraesCS6B01G194600 chr5D 87.097 62 8 0 3860 3921 499924033 499924094 2.180000e-08 71.3
49 TraesCS6B01G194600 chr1B 87.879 165 20 0 1828 1992 204930644 204930480 1.240000e-45 195.0
50 TraesCS6B01G194600 chr1B 89.286 84 7 2 1529 1612 401618951 401619032 2.150000e-18 104.0
51 TraesCS6B01G194600 chr1B 86.957 92 11 1 1529 1620 325271722 325271812 7.740000e-18 102.0
52 TraesCS6B01G194600 chr7A 95.833 72 3 0 1469 1540 658938922 658938851 2.760000e-22 117.0
53 TraesCS6B01G194600 chr4B 90.000 90 9 0 1702 1791 577021401 577021312 2.760000e-22 117.0
54 TraesCS6B01G194600 chr4B 88.889 90 9 1 1529 1618 270831668 270831756 4.620000e-20 110.0
55 TraesCS6B01G194600 chrUn 85.870 92 9 4 1531 1621 425570682 425570770 1.290000e-15 95.3
56 TraesCS6B01G194600 chr5A 87.097 62 8 0 3860 3921 290911051 290911112 2.180000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G194600 chr6B 229519460 229523832 4372 True 8076.000000 8076 100.000000 1 4373 1 chr6B.!!$R1 4372
1 TraesCS6B01G194600 chr6D 131937088 131942251 5163 True 818.257143 2839 94.248286 1 4373 7 chr6D.!!$R2 4372
2 TraesCS6B01G194600 chr6A 170899621 170902881 3260 True 537.500000 1550 90.912250 449 4240 8 chr6A.!!$R2 3791
3 TraesCS6B01G194600 chr5B 7145338 7145840 502 False 436.000000 436 82.975000 1049 1540 1 chr5B.!!$F1 491

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
439 440 0.832135 AGAAGCGTCCTTGACTCCCA 60.832 55.0 0.00 0.00 0.00 4.37 F
1106 1456 0.600255 CTGAAGTTCTTGCCGTCCGT 60.600 55.0 4.17 0.00 0.00 4.69 F
1424 1794 0.107361 TCCATCATGGAGCACTGCAG 60.107 55.0 13.48 13.48 42.67 4.41 F
3033 3405 0.321671 TGCTCTGTACCAAGGACTGC 59.678 55.0 0.00 0.00 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1424 1794 0.036388 TGTCCCTTGCACGGAAGATC 60.036 55.000 11.54 0.00 0.00 2.75 R
2188 2560 2.171489 GAGTGTTTTCCGCGGACAGC 62.171 60.000 31.19 24.74 43.95 4.40 R
3330 3702 4.057428 GACGGTCCAGCACGCTCT 62.057 66.667 0.00 0.00 0.00 4.09 R
3854 4226 0.032515 TGGATCGGTTAGGCTCTCCA 60.033 55.000 0.00 0.00 33.74 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 2.105528 CACGTATCGGAACCGGGG 59.894 66.667 6.32 3.38 40.25 5.73
81 82 3.118519 GGGATGTGTATTAACCGGTGAGT 60.119 47.826 8.52 0.00 0.00 3.41
122 123 8.786826 TCTTTCTTCTAGTGAGTTGACAAAAA 57.213 30.769 0.00 0.00 0.00 1.94
146 147 3.394674 TTGCAGTACCATTCAACGAGA 57.605 42.857 0.00 0.00 0.00 4.04
152 153 4.082190 CAGTACCATTCAACGAGAGGAAGA 60.082 45.833 0.00 0.00 0.00 2.87
153 154 3.320673 ACCATTCAACGAGAGGAAGAC 57.679 47.619 0.00 0.00 0.00 3.01
156 157 2.991434 TTCAACGAGAGGAAGACGAG 57.009 50.000 0.00 0.00 0.00 4.18
157 158 1.893544 TCAACGAGAGGAAGACGAGT 58.106 50.000 0.00 0.00 0.00 4.18
158 159 2.228059 TCAACGAGAGGAAGACGAGTT 58.772 47.619 0.00 0.00 0.00 3.01
159 160 2.621998 TCAACGAGAGGAAGACGAGTTT 59.378 45.455 0.00 0.00 0.00 2.66
160 161 3.067742 TCAACGAGAGGAAGACGAGTTTT 59.932 43.478 0.00 0.00 0.00 2.43
161 162 4.276678 TCAACGAGAGGAAGACGAGTTTTA 59.723 41.667 0.00 0.00 0.00 1.52
162 163 5.048224 TCAACGAGAGGAAGACGAGTTTTAT 60.048 40.000 0.00 0.00 0.00 1.40
163 164 5.388408 ACGAGAGGAAGACGAGTTTTATT 57.612 39.130 0.00 0.00 0.00 1.40
164 165 5.780984 ACGAGAGGAAGACGAGTTTTATTT 58.219 37.500 0.00 0.00 0.00 1.40
165 166 6.221659 ACGAGAGGAAGACGAGTTTTATTTT 58.778 36.000 0.00 0.00 0.00 1.82
166 167 6.365518 ACGAGAGGAAGACGAGTTTTATTTTC 59.634 38.462 0.00 0.00 0.00 2.29
167 168 6.586844 CGAGAGGAAGACGAGTTTTATTTTCT 59.413 38.462 0.00 0.00 0.00 2.52
168 169 7.410942 CGAGAGGAAGACGAGTTTTATTTTCTG 60.411 40.741 0.00 0.00 0.00 3.02
169 170 7.442656 AGAGGAAGACGAGTTTTATTTTCTGA 58.557 34.615 0.00 0.00 0.00 3.27
170 171 7.931948 AGAGGAAGACGAGTTTTATTTTCTGAA 59.068 33.333 0.00 0.00 0.00 3.02
171 172 8.446599 AGGAAGACGAGTTTTATTTTCTGAAA 57.553 30.769 0.00 0.00 0.00 2.69
172 173 8.560374 AGGAAGACGAGTTTTATTTTCTGAAAG 58.440 33.333 2.75 0.00 0.00 2.62
173 174 7.803659 GGAAGACGAGTTTTATTTTCTGAAAGG 59.196 37.037 2.75 0.00 0.00 3.11
174 175 8.446599 AAGACGAGTTTTATTTTCTGAAAGGA 57.553 30.769 2.75 0.00 0.00 3.36
175 176 8.089115 AGACGAGTTTTATTTTCTGAAAGGAG 57.911 34.615 2.75 0.00 0.00 3.69
176 177 7.173390 AGACGAGTTTTATTTTCTGAAAGGAGG 59.827 37.037 2.75 0.00 0.00 4.30
177 178 6.996282 ACGAGTTTTATTTTCTGAAAGGAGGA 59.004 34.615 2.75 0.00 0.00 3.71
178 179 7.173390 ACGAGTTTTATTTTCTGAAAGGAGGAG 59.827 37.037 2.75 0.00 0.00 3.69
179 180 7.387948 CGAGTTTTATTTTCTGAAAGGAGGAGA 59.612 37.037 2.75 0.00 0.00 3.71
180 181 8.628630 AGTTTTATTTTCTGAAAGGAGGAGAG 57.371 34.615 2.75 0.00 0.00 3.20
181 182 7.667635 AGTTTTATTTTCTGAAAGGAGGAGAGG 59.332 37.037 2.75 0.00 0.00 3.69
182 183 6.952605 TTATTTTCTGAAAGGAGGAGAGGA 57.047 37.500 2.75 0.00 0.00 3.71
183 184 5.850046 ATTTTCTGAAAGGAGGAGAGGAA 57.150 39.130 2.75 0.00 0.00 3.36
184 185 4.899352 TTTCTGAAAGGAGGAGAGGAAG 57.101 45.455 0.00 0.00 0.00 3.46
185 186 3.835478 TCTGAAAGGAGGAGAGGAAGA 57.165 47.619 0.00 0.00 0.00 2.87
186 187 3.436243 TCTGAAAGGAGGAGAGGAAGAC 58.564 50.000 0.00 0.00 0.00 3.01
187 188 2.165437 CTGAAAGGAGGAGAGGAAGACG 59.835 54.545 0.00 0.00 0.00 4.18
188 189 2.225041 TGAAAGGAGGAGAGGAAGACGA 60.225 50.000 0.00 0.00 0.00 4.20
189 190 2.137810 AAGGAGGAGAGGAAGACGAG 57.862 55.000 0.00 0.00 0.00 4.18
190 191 0.996583 AGGAGGAGAGGAAGACGAGT 59.003 55.000 0.00 0.00 0.00 4.18
191 192 1.356398 AGGAGGAGAGGAAGACGAGTT 59.644 52.381 0.00 0.00 0.00 3.01
192 193 1.474879 GGAGGAGAGGAAGACGAGTTG 59.525 57.143 0.00 0.00 0.00 3.16
193 194 1.474879 GAGGAGAGGAAGACGAGTTGG 59.525 57.143 0.00 0.00 0.00 3.77
194 195 1.075698 AGGAGAGGAAGACGAGTTGGA 59.924 52.381 0.00 0.00 0.00 3.53
195 196 1.893801 GGAGAGGAAGACGAGTTGGAA 59.106 52.381 0.00 0.00 0.00 3.53
196 197 2.299297 GGAGAGGAAGACGAGTTGGAAA 59.701 50.000 0.00 0.00 0.00 3.13
210 211 2.727123 TGGAAACAAGTGGAAGCTGA 57.273 45.000 0.00 0.00 37.44 4.26
211 212 3.011566 TGGAAACAAGTGGAAGCTGAA 57.988 42.857 0.00 0.00 37.44 3.02
239 240 8.774890 TTAGCTAGTATACTATCTCCGTCTTG 57.225 38.462 17.40 2.62 0.00 3.02
252 253 7.687941 ATCTCCGTCTTGAAATAAATGTTGT 57.312 32.000 0.00 0.00 0.00 3.32
254 255 7.359595 TCTCCGTCTTGAAATAAATGTTGTTG 58.640 34.615 0.00 0.00 0.00 3.33
339 340 9.919348 CAATGACACTTATTTTGAAACAAAAGG 57.081 29.630 13.54 9.40 0.00 3.11
381 382 2.032799 CACGGTAAGCAGCTTTGAACAA 59.967 45.455 14.29 0.00 0.00 2.83
393 394 7.042523 AGCAGCTTTGAACAAAATGTATTTGTC 60.043 33.333 6.99 2.91 41.30 3.18
406 407 8.846943 AAATGTATTTGTCTATATCATCGCCA 57.153 30.769 0.00 0.00 0.00 5.69
414 415 4.218635 GTCTATATCATCGCCAACCTCTCA 59.781 45.833 0.00 0.00 0.00 3.27
434 435 2.370281 TGATCAGAAGCGTCCTTGAC 57.630 50.000 0.00 0.00 0.00 3.18
439 440 0.832135 AGAAGCGTCCTTGACTCCCA 60.832 55.000 0.00 0.00 0.00 4.37
441 442 1.480954 GAAGCGTCCTTGACTCCCATA 59.519 52.381 0.00 0.00 0.00 2.74
479 480 3.063997 CACTTTCCGAGCAATGATGTACC 59.936 47.826 0.00 0.00 0.00 3.34
523 524 3.266772 TCCTAAGACCTGCATCCACATTT 59.733 43.478 0.00 0.00 0.00 2.32
566 579 8.037382 TGATGCAGAAGAAGAGTATTCTTTTG 57.963 34.615 20.71 20.71 43.63 2.44
635 648 5.508994 GGACCATTTGACCACGAGAATTTTT 60.509 40.000 0.00 0.00 0.00 1.94
655 671 5.342361 TTTCCTTGGGGTTTGGTTATAGT 57.658 39.130 0.00 0.00 0.00 2.12
656 672 6.466009 TTTCCTTGGGGTTTGGTTATAGTA 57.534 37.500 0.00 0.00 0.00 1.82
657 673 5.440207 TCCTTGGGGTTTGGTTATAGTAC 57.560 43.478 0.00 0.00 0.00 2.73
667 683 7.708322 GGGTTTGGTTATAGTACTAGTAGTTGC 59.292 40.741 15.34 2.44 0.00 4.17
692 708 2.535485 TACATGGAAGCTGCGGGGTG 62.535 60.000 0.00 0.00 0.00 4.61
703 719 2.099405 CTGCGGGGTGGAAAACATAAT 58.901 47.619 0.00 0.00 0.00 1.28
935 1015 2.549926 CCTATGCTTGCATACGTGACA 58.450 47.619 10.84 0.00 0.00 3.58
937 1017 3.373748 CCTATGCTTGCATACGTGACAAA 59.626 43.478 10.84 0.00 0.00 2.83
942 1022 3.419915 CTTGCATACGTGACAAATCAGC 58.580 45.455 0.00 0.00 34.75 4.26
944 1024 1.267532 GCATACGTGACAAATCAGCGG 60.268 52.381 0.00 0.00 34.75 5.52
947 1027 2.667318 CGTGACAAATCAGCGGCGT 61.667 57.895 9.37 0.00 34.75 5.68
948 1028 1.574428 GTGACAAATCAGCGGCGTT 59.426 52.632 9.37 0.00 34.75 4.84
952 1032 2.750237 AAATCAGCGGCGTTCCCC 60.750 61.111 9.37 0.00 0.00 4.81
953 1033 4.796495 AATCAGCGGCGTTCCCCC 62.796 66.667 9.37 0.00 0.00 5.40
976 1056 0.886563 GGACGACGAGAGGAAAGGAA 59.113 55.000 0.00 0.00 0.00 3.36
1106 1456 0.600255 CTGAAGTTCTTGCCGTCCGT 60.600 55.000 4.17 0.00 0.00 4.69
1111 1461 1.081242 TTCTTGCCGTCCGTCGTAC 60.081 57.895 0.00 0.00 37.94 3.67
1114 1464 2.752322 CTTGCCGTCCGTCGTACCAA 62.752 60.000 0.00 0.00 37.94 3.67
1136 1486 2.185867 GCCCGCGTAGTGATTCCA 59.814 61.111 4.92 0.00 43.07 3.53
1241 1608 7.453393 TCTGAACTCACAGTAAATTGGAATCT 58.547 34.615 0.00 0.00 38.79 2.40
1270 1637 7.617557 AGAAATGTTTGTTAATTTCGTTGCAC 58.382 30.769 0.00 0.00 44.10 4.57
1274 1641 7.295952 TGTTTGTTAATTTCGTTGCACAAAT 57.704 28.000 0.00 0.00 37.00 2.32
1277 1645 7.987268 TTGTTAATTTCGTTGCACAAATACA 57.013 28.000 0.00 0.00 0.00 2.29
1280 1648 8.483218 TGTTAATTTCGTTGCACAAATACAATG 58.517 29.630 0.00 0.00 34.73 2.82
1295 1663 8.089597 ACAAATACAATGAATTCATGTCTTGCA 58.910 29.630 21.39 8.13 36.56 4.08
1424 1794 0.107361 TCCATCATGGAGCACTGCAG 60.107 55.000 13.48 13.48 42.67 4.41
1762 2133 2.413142 CGTCCCGGACCCAGACTAC 61.413 68.421 12.16 0.00 0.00 2.73
1881 2252 8.438676 AAAAGATATATGGTGTCTGTTAGCAC 57.561 34.615 0.00 0.00 35.07 4.40
1882 2253 5.773575 AGATATATGGTGTCTGTTAGCACG 58.226 41.667 0.00 0.00 36.54 5.34
1883 2254 2.665649 TATGGTGTCTGTTAGCACGG 57.334 50.000 0.00 0.00 36.54 4.94
1884 2255 0.685097 ATGGTGTCTGTTAGCACGGT 59.315 50.000 0.00 0.00 36.54 4.83
1885 2256 1.330234 TGGTGTCTGTTAGCACGGTA 58.670 50.000 0.00 0.00 36.54 4.02
1886 2257 1.687660 TGGTGTCTGTTAGCACGGTAA 59.312 47.619 0.00 0.00 36.54 2.85
1887 2258 2.300723 TGGTGTCTGTTAGCACGGTAAT 59.699 45.455 0.00 0.00 36.54 1.89
1888 2259 3.510753 TGGTGTCTGTTAGCACGGTAATA 59.489 43.478 0.00 0.00 36.54 0.98
1889 2260 4.160814 TGGTGTCTGTTAGCACGGTAATAT 59.839 41.667 0.00 0.00 36.54 1.28
1890 2261 4.506654 GGTGTCTGTTAGCACGGTAATATG 59.493 45.833 0.00 0.00 36.54 1.78
1891 2262 5.107133 GTGTCTGTTAGCACGGTAATATGT 58.893 41.667 0.00 0.00 0.00 2.29
1892 2263 5.231568 GTGTCTGTTAGCACGGTAATATGTC 59.768 44.000 0.00 0.00 0.00 3.06
1893 2264 4.743644 GTCTGTTAGCACGGTAATATGTCC 59.256 45.833 0.00 0.00 0.00 4.02
1894 2265 4.403113 TCTGTTAGCACGGTAATATGTCCA 59.597 41.667 0.00 0.00 0.00 4.02
1895 2266 5.069914 TCTGTTAGCACGGTAATATGTCCAT 59.930 40.000 0.00 0.00 0.00 3.41
1896 2267 5.294356 TGTTAGCACGGTAATATGTCCATC 58.706 41.667 0.00 0.00 0.00 3.51
1897 2268 3.402628 AGCACGGTAATATGTCCATCC 57.597 47.619 0.00 0.00 0.00 3.51
1898 2269 2.703536 AGCACGGTAATATGTCCATCCA 59.296 45.455 0.00 0.00 0.00 3.41
1899 2270 3.327757 AGCACGGTAATATGTCCATCCAT 59.672 43.478 0.00 0.00 0.00 3.41
1905 2276 5.350365 CGGTAATATGTCCATCCATTAACCG 59.650 44.000 0.00 0.00 37.09 4.44
1965 2336 4.524749 CATATGCAGACAATCTTCTTGCG 58.475 43.478 0.00 0.00 0.00 4.85
2021 2392 0.984230 TTTCAGGCCAGTCTACCCTG 59.016 55.000 5.01 10.39 45.88 4.45
2336 2708 4.661222 TGCCAACATATTCCACTGAAAGA 58.339 39.130 0.00 0.00 37.43 2.52
2544 2916 2.180276 CCCTGGTTAGTGCACTCTACT 58.820 52.381 25.56 0.74 0.00 2.57
2571 2943 9.933723 TTCCAGTGTAAACTAAATAAGTAGGAC 57.066 33.333 0.00 0.00 37.50 3.85
3033 3405 0.321671 TGCTCTGTACCAAGGACTGC 59.678 55.000 0.00 0.00 0.00 4.40
3063 3435 8.660373 GTCTTGTCCAGTTAATCTATCTTGTTG 58.340 37.037 0.00 0.00 0.00 3.33
3165 3537 2.808543 GCCGCAATTTCCTATCCTAGTG 59.191 50.000 0.00 0.00 0.00 2.74
3330 3702 6.350194 GCCGACAACTCTATGATATCATGGTA 60.350 42.308 25.44 12.82 37.15 3.25
3460 3832 2.105766 AGCCCTTGAAAATCTCCATGC 58.894 47.619 0.00 0.00 0.00 4.06
3475 3847 6.203808 TCTCCATGCATGATTTGAAGAAAG 57.796 37.500 28.31 6.55 0.00 2.62
3481 3853 7.274904 CCATGCATGATTTGAAGAAAGTACTTG 59.725 37.037 28.31 0.04 0.00 3.16
3632 4004 2.635915 TGTCCAATCCCTACGAAGTGTT 59.364 45.455 0.00 0.00 45.73 3.32
3633 4005 3.833650 TGTCCAATCCCTACGAAGTGTTA 59.166 43.478 0.00 0.00 45.73 2.41
3634 4006 4.081862 TGTCCAATCCCTACGAAGTGTTAG 60.082 45.833 0.00 0.00 45.73 2.34
3635 4007 4.159135 GTCCAATCCCTACGAAGTGTTAGA 59.841 45.833 0.00 0.00 45.73 2.10
3636 4008 4.401519 TCCAATCCCTACGAAGTGTTAGAG 59.598 45.833 0.00 0.00 45.73 2.43
3637 4009 4.401519 CCAATCCCTACGAAGTGTTAGAGA 59.598 45.833 0.00 0.00 45.73 3.10
3638 4010 5.069251 CCAATCCCTACGAAGTGTTAGAGAT 59.931 44.000 0.00 0.00 45.73 2.75
3639 4011 6.264744 CCAATCCCTACGAAGTGTTAGAGATA 59.735 42.308 0.00 0.00 45.73 1.98
3640 4012 7.039644 CCAATCCCTACGAAGTGTTAGAGATAT 60.040 40.741 0.00 0.00 45.73 1.63
3641 4013 9.011095 CAATCCCTACGAAGTGTTAGAGATATA 57.989 37.037 0.00 0.00 45.73 0.86
3642 4014 9.756571 AATCCCTACGAAGTGTTAGAGATATAT 57.243 33.333 0.00 0.00 45.73 0.86
3643 4015 9.756571 ATCCCTACGAAGTGTTAGAGATATATT 57.243 33.333 0.00 0.00 45.73 1.28
3644 4016 9.584008 TCCCTACGAAGTGTTAGAGATATATTT 57.416 33.333 0.00 0.00 45.73 1.40
3645 4017 9.627395 CCCTACGAAGTGTTAGAGATATATTTG 57.373 37.037 0.00 0.00 45.73 2.32
3646 4018 9.627395 CCTACGAAGTGTTAGAGATATATTTGG 57.373 37.037 0.00 0.00 45.73 3.28
3647 4019 9.627395 CTACGAAGTGTTAGAGATATATTTGGG 57.373 37.037 0.00 0.00 45.73 4.12
3648 4020 8.246430 ACGAAGTGTTAGAGATATATTTGGGA 57.754 34.615 0.00 0.00 42.51 4.37
3649 4021 8.871125 ACGAAGTGTTAGAGATATATTTGGGAT 58.129 33.333 0.00 0.00 42.51 3.85
3666 4038 8.691661 ATTTGGGATACATGTATTTGGTAGTC 57.308 34.615 19.19 5.18 39.74 2.59
3667 4039 7.446106 TTGGGATACATGTATTTGGTAGTCT 57.554 36.000 19.19 0.00 39.74 3.24
3668 4040 8.555896 TTGGGATACATGTATTTGGTAGTCTA 57.444 34.615 19.19 0.00 39.74 2.59
3669 4041 8.190326 TGGGATACATGTATTTGGTAGTCTAG 57.810 38.462 19.19 0.00 39.74 2.43
3670 4042 7.234782 TGGGATACATGTATTTGGTAGTCTAGG 59.765 40.741 19.19 0.00 39.74 3.02
3671 4043 7.453752 GGGATACATGTATTTGGTAGTCTAGGA 59.546 40.741 19.19 0.00 39.74 2.94
3672 4044 9.036980 GGATACATGTATTTGGTAGTCTAGGAT 57.963 37.037 19.19 0.00 0.00 3.24
3675 4047 8.964476 ACATGTATTTGGTAGTCTAGGATTTG 57.036 34.615 0.00 0.00 0.00 2.32
3676 4048 8.548877 ACATGTATTTGGTAGTCTAGGATTTGT 58.451 33.333 0.00 0.00 0.00 2.83
3682 4054 6.401047 TGGTAGTCTAGGATTTGTAATCCG 57.599 41.667 11.65 1.16 42.87 4.18
3683 4055 5.895534 TGGTAGTCTAGGATTTGTAATCCGT 59.104 40.000 11.65 4.83 42.87 4.69
3684 4056 6.040166 TGGTAGTCTAGGATTTGTAATCCGTC 59.960 42.308 11.65 5.43 42.87 4.79
3685 4057 6.264970 GGTAGTCTAGGATTTGTAATCCGTCT 59.735 42.308 11.65 10.74 42.87 4.18
3686 4058 6.394025 AGTCTAGGATTTGTAATCCGTCTC 57.606 41.667 11.65 5.97 42.87 3.36
3687 4059 5.302313 AGTCTAGGATTTGTAATCCGTCTCC 59.698 44.000 11.65 2.79 42.87 3.71
3688 4060 5.302313 GTCTAGGATTTGTAATCCGTCTCCT 59.698 44.000 11.65 0.00 42.87 3.69
3689 4061 4.408182 AGGATTTGTAATCCGTCTCCTG 57.592 45.455 11.65 0.00 42.87 3.86
3690 4062 2.872858 GGATTTGTAATCCGTCTCCTGC 59.127 50.000 2.90 0.00 0.00 4.85
3691 4063 2.396590 TTTGTAATCCGTCTCCTGCC 57.603 50.000 0.00 0.00 0.00 4.85
3692 4064 1.568504 TTGTAATCCGTCTCCTGCCT 58.431 50.000 0.00 0.00 0.00 4.75
3693 4065 1.568504 TGTAATCCGTCTCCTGCCTT 58.431 50.000 0.00 0.00 0.00 4.35
3694 4066 2.742348 TGTAATCCGTCTCCTGCCTTA 58.258 47.619 0.00 0.00 0.00 2.69
3695 4067 3.305720 TGTAATCCGTCTCCTGCCTTAT 58.694 45.455 0.00 0.00 0.00 1.73
3696 4068 3.321111 TGTAATCCGTCTCCTGCCTTATC 59.679 47.826 0.00 0.00 0.00 1.75
3697 4069 2.390225 ATCCGTCTCCTGCCTTATCT 57.610 50.000 0.00 0.00 0.00 1.98
3698 4070 1.693627 TCCGTCTCCTGCCTTATCTC 58.306 55.000 0.00 0.00 0.00 2.75
3699 4071 0.676736 CCGTCTCCTGCCTTATCTCC 59.323 60.000 0.00 0.00 0.00 3.71
3700 4072 1.403814 CGTCTCCTGCCTTATCTCCA 58.596 55.000 0.00 0.00 0.00 3.86
3701 4073 1.339610 CGTCTCCTGCCTTATCTCCAG 59.660 57.143 0.00 0.00 0.00 3.86
3702 4074 1.691434 GTCTCCTGCCTTATCTCCAGG 59.309 57.143 0.00 0.00 45.88 4.45
3707 4079 1.969923 CTGCCTTATCTCCAGGAGAGG 59.030 57.143 23.96 19.71 42.26 3.69
3708 4080 0.684535 GCCTTATCTCCAGGAGAGGC 59.315 60.000 25.35 25.35 42.26 4.70
3709 4081 1.761009 GCCTTATCTCCAGGAGAGGCT 60.761 57.143 29.41 16.03 45.70 4.58
3710 4082 2.688477 CCTTATCTCCAGGAGAGGCTT 58.312 52.381 23.96 10.20 42.26 4.35
3711 4083 2.632512 CCTTATCTCCAGGAGAGGCTTC 59.367 54.545 23.96 0.00 42.26 3.86
3712 4084 3.575805 CTTATCTCCAGGAGAGGCTTCT 58.424 50.000 23.96 9.11 42.26 2.85
3713 4085 1.792115 ATCTCCAGGAGAGGCTTCTG 58.208 55.000 23.96 0.00 42.26 3.02
3714 4086 0.411452 TCTCCAGGAGAGGCTTCTGT 59.589 55.000 15.98 0.00 43.44 3.41
3715 4087 0.823460 CTCCAGGAGAGGCTTCTGTC 59.177 60.000 11.62 0.00 35.42 3.51
3720 4092 1.270907 GGAGAGGCTTCTGTCCTTCA 58.729 55.000 1.65 0.00 44.83 3.02
3721 4093 1.625818 GGAGAGGCTTCTGTCCTTCAA 59.374 52.381 1.65 0.00 44.83 2.69
3722 4094 2.354604 GGAGAGGCTTCTGTCCTTCAAG 60.355 54.545 1.65 0.00 44.83 3.02
3723 4095 2.301583 GAGAGGCTTCTGTCCTTCAAGT 59.698 50.000 1.65 0.00 33.24 3.16
3724 4096 2.301583 AGAGGCTTCTGTCCTTCAAGTC 59.698 50.000 0.00 0.00 33.24 3.01
3725 4097 2.301583 GAGGCTTCTGTCCTTCAAGTCT 59.698 50.000 0.00 0.00 33.24 3.24
3726 4098 2.708325 AGGCTTCTGTCCTTCAAGTCTT 59.292 45.455 0.00 0.00 0.00 3.01
3727 4099 2.810852 GGCTTCTGTCCTTCAAGTCTTG 59.189 50.000 6.21 6.21 0.00 3.02
3728 4100 3.471680 GCTTCTGTCCTTCAAGTCTTGT 58.528 45.455 12.30 0.00 0.00 3.16
3729 4101 4.503296 GGCTTCTGTCCTTCAAGTCTTGTA 60.503 45.833 12.30 2.10 0.00 2.41
3730 4102 4.449405 GCTTCTGTCCTTCAAGTCTTGTAC 59.551 45.833 12.30 7.57 0.00 2.90
3731 4103 5.740513 GCTTCTGTCCTTCAAGTCTTGTACT 60.741 44.000 12.30 0.00 41.49 2.73
3732 4104 5.455056 TCTGTCCTTCAAGTCTTGTACTC 57.545 43.478 12.30 2.52 37.50 2.59
3733 4105 4.893524 TCTGTCCTTCAAGTCTTGTACTCA 59.106 41.667 12.30 6.35 37.50 3.41
3734 4106 5.362717 TCTGTCCTTCAAGTCTTGTACTCAA 59.637 40.000 12.30 0.00 37.50 3.02
3735 4107 6.042093 TCTGTCCTTCAAGTCTTGTACTCAAT 59.958 38.462 12.30 0.00 37.50 2.57
3736 4108 7.232737 TCTGTCCTTCAAGTCTTGTACTCAATA 59.767 37.037 12.30 0.00 37.50 1.90
3737 4109 7.907389 TGTCCTTCAAGTCTTGTACTCAATAT 58.093 34.615 12.30 0.00 37.50 1.28
3738 4110 9.031537 TGTCCTTCAAGTCTTGTACTCAATATA 57.968 33.333 12.30 0.00 37.50 0.86
3748 4120 9.694137 GTCTTGTACTCAATATATACTCAACCC 57.306 37.037 0.00 0.00 32.82 4.11
3749 4121 9.656323 TCTTGTACTCAATATATACTCAACCCT 57.344 33.333 0.00 0.00 32.82 4.34
3750 4122 9.915629 CTTGTACTCAATATATACTCAACCCTC 57.084 37.037 0.00 0.00 32.82 4.30
3751 4123 8.107399 TGTACTCAATATATACTCAACCCTCG 57.893 38.462 0.00 0.00 0.00 4.63
3752 4124 6.591750 ACTCAATATATACTCAACCCTCGG 57.408 41.667 0.00 0.00 0.00 4.63
3753 4125 5.480772 ACTCAATATATACTCAACCCTCGGG 59.519 44.000 0.00 0.00 42.03 5.14
3763 4135 3.971894 CCCTCGGGGCTCAGTAAT 58.028 61.111 0.00 0.00 35.35 1.89
3764 4136 3.143010 CCCTCGGGGCTCAGTAATA 57.857 57.895 0.00 0.00 35.35 0.98
3765 4137 0.680061 CCCTCGGGGCTCAGTAATAC 59.320 60.000 0.00 0.00 35.35 1.89
3766 4138 1.410004 CCTCGGGGCTCAGTAATACA 58.590 55.000 0.00 0.00 0.00 2.29
3767 4139 1.971357 CCTCGGGGCTCAGTAATACAT 59.029 52.381 0.00 0.00 0.00 2.29
3768 4140 2.028930 CCTCGGGGCTCAGTAATACATC 60.029 54.545 0.00 0.00 0.00 3.06
3769 4141 1.968493 TCGGGGCTCAGTAATACATCC 59.032 52.381 0.00 0.00 0.00 3.51
3770 4142 1.691976 CGGGGCTCAGTAATACATCCA 59.308 52.381 0.00 0.00 0.00 3.41
3771 4143 2.303022 CGGGGCTCAGTAATACATCCAT 59.697 50.000 0.00 0.00 0.00 3.41
3772 4144 3.617531 CGGGGCTCAGTAATACATCCATC 60.618 52.174 0.00 0.00 0.00 3.51
3773 4145 3.327757 GGGGCTCAGTAATACATCCATCA 59.672 47.826 0.00 0.00 0.00 3.07
3774 4146 4.018960 GGGGCTCAGTAATACATCCATCAT 60.019 45.833 0.00 0.00 0.00 2.45
3775 4147 5.189736 GGGGCTCAGTAATACATCCATCATA 59.810 44.000 0.00 0.00 0.00 2.15
3776 4148 6.109359 GGGCTCAGTAATACATCCATCATAC 58.891 44.000 0.00 0.00 0.00 2.39
3777 4149 6.070538 GGGCTCAGTAATACATCCATCATACT 60.071 42.308 0.00 0.00 0.00 2.12
3778 4150 7.038659 GGCTCAGTAATACATCCATCATACTC 58.961 42.308 0.00 0.00 0.00 2.59
3779 4151 7.038659 GCTCAGTAATACATCCATCATACTCC 58.961 42.308 0.00 0.00 0.00 3.85
3780 4152 7.310052 GCTCAGTAATACATCCATCATACTCCA 60.310 40.741 0.00 0.00 0.00 3.86
3781 4153 7.896811 TCAGTAATACATCCATCATACTCCAC 58.103 38.462 0.00 0.00 0.00 4.02
3782 4154 7.039011 TCAGTAATACATCCATCATACTCCACC 60.039 40.741 0.00 0.00 0.00 4.61
3783 4155 6.787458 AGTAATACATCCATCATACTCCACCA 59.213 38.462 0.00 0.00 0.00 4.17
3784 4156 6.514012 AATACATCCATCATACTCCACCAA 57.486 37.500 0.00 0.00 0.00 3.67
3785 4157 6.708885 ATACATCCATCATACTCCACCAAT 57.291 37.500 0.00 0.00 0.00 3.16
3786 4158 5.393068 ACATCCATCATACTCCACCAATT 57.607 39.130 0.00 0.00 0.00 2.32
3787 4159 5.380043 ACATCCATCATACTCCACCAATTC 58.620 41.667 0.00 0.00 0.00 2.17
3788 4160 5.133322 ACATCCATCATACTCCACCAATTCT 59.867 40.000 0.00 0.00 0.00 2.40
3789 4161 5.296151 TCCATCATACTCCACCAATTCTC 57.704 43.478 0.00 0.00 0.00 2.87
3790 4162 4.971282 TCCATCATACTCCACCAATTCTCT 59.029 41.667 0.00 0.00 0.00 3.10
3791 4163 5.070981 TCCATCATACTCCACCAATTCTCTC 59.929 44.000 0.00 0.00 0.00 3.20
3792 4164 5.071519 CCATCATACTCCACCAATTCTCTCT 59.928 44.000 0.00 0.00 0.00 3.10
3793 4165 5.860941 TCATACTCCACCAATTCTCTCTC 57.139 43.478 0.00 0.00 0.00 3.20
3794 4166 4.651503 TCATACTCCACCAATTCTCTCTCC 59.348 45.833 0.00 0.00 0.00 3.71
3795 4167 2.192263 ACTCCACCAATTCTCTCTCCC 58.808 52.381 0.00 0.00 0.00 4.30
3796 4168 2.225753 ACTCCACCAATTCTCTCTCCCT 60.226 50.000 0.00 0.00 0.00 4.20
3797 4169 2.433970 CTCCACCAATTCTCTCTCCCTC 59.566 54.545 0.00 0.00 0.00 4.30
3798 4170 2.045047 TCCACCAATTCTCTCTCCCTCT 59.955 50.000 0.00 0.00 0.00 3.69
3799 4171 2.843113 CCACCAATTCTCTCTCCCTCTT 59.157 50.000 0.00 0.00 0.00 2.85
3800 4172 3.118445 CCACCAATTCTCTCTCCCTCTTC 60.118 52.174 0.00 0.00 0.00 2.87
3801 4173 3.517100 CACCAATTCTCTCTCCCTCTTCA 59.483 47.826 0.00 0.00 0.00 3.02
3802 4174 4.163839 CACCAATTCTCTCTCCCTCTTCAT 59.836 45.833 0.00 0.00 0.00 2.57
3803 4175 5.365025 CACCAATTCTCTCTCCCTCTTCATA 59.635 44.000 0.00 0.00 0.00 2.15
3804 4176 5.365314 ACCAATTCTCTCTCCCTCTTCATAC 59.635 44.000 0.00 0.00 0.00 2.39
3805 4177 5.602145 CCAATTCTCTCTCCCTCTTCATACT 59.398 44.000 0.00 0.00 0.00 2.12
3806 4178 6.239289 CCAATTCTCTCTCCCTCTTCATACTC 60.239 46.154 0.00 0.00 0.00 2.59
3807 4179 5.458451 TTCTCTCTCCCTCTTCATACTCA 57.542 43.478 0.00 0.00 0.00 3.41
3808 4180 5.661503 TCTCTCTCCCTCTTCATACTCAT 57.338 43.478 0.00 0.00 0.00 2.90
3809 4181 5.630121 TCTCTCTCCCTCTTCATACTCATC 58.370 45.833 0.00 0.00 0.00 2.92
3810 4182 5.372363 TCTCTCTCCCTCTTCATACTCATCT 59.628 44.000 0.00 0.00 0.00 2.90
3811 4183 6.024563 TCTCTCCCTCTTCATACTCATCTT 57.975 41.667 0.00 0.00 0.00 2.40
3812 4184 6.439487 TCTCTCCCTCTTCATACTCATCTTT 58.561 40.000 0.00 0.00 0.00 2.52
3813 4185 6.323482 TCTCTCCCTCTTCATACTCATCTTTG 59.677 42.308 0.00 0.00 0.00 2.77
3814 4186 5.365025 TCTCCCTCTTCATACTCATCTTTGG 59.635 44.000 0.00 0.00 0.00 3.28
3815 4187 4.133078 CCCTCTTCATACTCATCTTTGGC 58.867 47.826 0.00 0.00 0.00 4.52
3816 4188 3.806521 CCTCTTCATACTCATCTTTGGCG 59.193 47.826 0.00 0.00 0.00 5.69
3817 4189 4.442052 CCTCTTCATACTCATCTTTGGCGA 60.442 45.833 0.00 0.00 0.00 5.54
3818 4190 5.282055 TCTTCATACTCATCTTTGGCGAT 57.718 39.130 0.00 0.00 0.00 4.58
3819 4191 5.292765 TCTTCATACTCATCTTTGGCGATC 58.707 41.667 0.00 0.00 0.00 3.69
3820 4192 4.670896 TCATACTCATCTTTGGCGATCA 57.329 40.909 0.00 0.00 0.00 2.92
3821 4193 5.022282 TCATACTCATCTTTGGCGATCAA 57.978 39.130 0.00 0.00 0.00 2.57
3822 4194 5.427378 TCATACTCATCTTTGGCGATCAAA 58.573 37.500 0.00 0.00 42.50 2.69
3832 4204 3.885724 TGGCGATCAAAGTCTGTATCA 57.114 42.857 0.00 0.00 0.00 2.15
3833 4205 3.785486 TGGCGATCAAAGTCTGTATCAG 58.215 45.455 0.00 0.00 0.00 2.90
3834 4206 3.195610 TGGCGATCAAAGTCTGTATCAGT 59.804 43.478 0.00 0.00 32.61 3.41
3835 4207 4.401202 TGGCGATCAAAGTCTGTATCAGTA 59.599 41.667 0.00 0.00 32.61 2.74
3836 4208 5.105513 TGGCGATCAAAGTCTGTATCAGTAA 60.106 40.000 0.00 0.00 32.61 2.24
3837 4209 5.810587 GGCGATCAAAGTCTGTATCAGTAAA 59.189 40.000 0.00 0.00 32.61 2.01
3838 4210 6.237861 GGCGATCAAAGTCTGTATCAGTAAAC 60.238 42.308 0.00 0.00 32.61 2.01
3839 4211 6.237861 GCGATCAAAGTCTGTATCAGTAAACC 60.238 42.308 0.00 0.00 32.61 3.27
3840 4212 6.255887 CGATCAAAGTCTGTATCAGTAAACCC 59.744 42.308 0.00 0.00 32.61 4.11
3841 4213 6.428083 TCAAAGTCTGTATCAGTAAACCCA 57.572 37.500 0.00 0.00 32.61 4.51
3842 4214 6.833041 TCAAAGTCTGTATCAGTAAACCCAA 58.167 36.000 0.00 0.00 32.61 4.12
3843 4215 6.708949 TCAAAGTCTGTATCAGTAAACCCAAC 59.291 38.462 0.00 0.00 32.61 3.77
3844 4216 5.161943 AGTCTGTATCAGTAAACCCAACC 57.838 43.478 0.00 0.00 32.61 3.77
3845 4217 4.595781 AGTCTGTATCAGTAAACCCAACCA 59.404 41.667 0.00 0.00 32.61 3.67
3846 4218 4.694037 GTCTGTATCAGTAAACCCAACCAC 59.306 45.833 0.00 0.00 32.61 4.16
3847 4219 4.595781 TCTGTATCAGTAAACCCAACCACT 59.404 41.667 0.00 0.00 32.61 4.00
3848 4220 4.901868 TGTATCAGTAAACCCAACCACTC 58.098 43.478 0.00 0.00 0.00 3.51
3849 4221 2.943036 TCAGTAAACCCAACCACTCC 57.057 50.000 0.00 0.00 0.00 3.85
3850 4222 1.071071 TCAGTAAACCCAACCACTCCG 59.929 52.381 0.00 0.00 0.00 4.63
3851 4223 1.134228 AGTAAACCCAACCACTCCGT 58.866 50.000 0.00 0.00 0.00 4.69
3852 4224 1.202722 AGTAAACCCAACCACTCCGTG 60.203 52.381 0.00 0.00 0.00 4.94
3853 4225 0.535553 TAAACCCAACCACTCCGTGC 60.536 55.000 0.00 0.00 31.34 5.34
3854 4226 2.279037 AAACCCAACCACTCCGTGCT 62.279 55.000 0.00 0.00 31.34 4.40
3855 4227 2.669569 CCCAACCACTCCGTGCTG 60.670 66.667 0.00 0.00 31.34 4.41
3856 4228 2.669569 CCAACCACTCCGTGCTGG 60.670 66.667 0.00 0.00 40.09 4.85
3864 4236 2.359011 TCCGTGCTGGAGAGCCTA 59.641 61.111 0.00 0.00 45.57 3.93
3865 4237 1.304962 TCCGTGCTGGAGAGCCTAA 60.305 57.895 0.00 0.00 45.57 2.69
3866 4238 1.153549 CCGTGCTGGAGAGCCTAAC 60.154 63.158 0.00 0.00 45.57 2.34
3867 4239 1.153549 CGTGCTGGAGAGCCTAACC 60.154 63.158 0.00 0.00 45.57 2.85
3868 4240 1.153549 GTGCTGGAGAGCCTAACCG 60.154 63.158 0.00 0.00 45.57 4.44
3869 4241 1.304962 TGCTGGAGAGCCTAACCGA 60.305 57.895 0.00 0.00 45.57 4.69
3870 4242 0.687757 TGCTGGAGAGCCTAACCGAT 60.688 55.000 0.00 0.00 45.57 4.18
3871 4243 0.032815 GCTGGAGAGCCTAACCGATC 59.967 60.000 0.00 0.00 39.57 3.69
3872 4244 0.676736 CTGGAGAGCCTAACCGATCC 59.323 60.000 0.00 0.00 34.31 3.36
3873 4245 0.032515 TGGAGAGCCTAACCGATCCA 60.033 55.000 0.00 0.00 34.54 3.41
3874 4246 1.120530 GGAGAGCCTAACCGATCCAA 58.879 55.000 0.00 0.00 0.00 3.53
3875 4247 1.202545 GGAGAGCCTAACCGATCCAAC 60.203 57.143 0.00 0.00 0.00 3.77
3876 4248 0.831307 AGAGCCTAACCGATCCAACC 59.169 55.000 0.00 0.00 0.00 3.77
3877 4249 0.179054 GAGCCTAACCGATCCAACCC 60.179 60.000 0.00 0.00 0.00 4.11
3878 4250 0.620700 AGCCTAACCGATCCAACCCT 60.621 55.000 0.00 0.00 0.00 4.34
3879 4251 1.125633 GCCTAACCGATCCAACCCTA 58.874 55.000 0.00 0.00 0.00 3.53
3880 4252 1.070289 GCCTAACCGATCCAACCCTAG 59.930 57.143 0.00 0.00 0.00 3.02
3881 4253 1.070289 CCTAACCGATCCAACCCTAGC 59.930 57.143 0.00 0.00 0.00 3.42
3882 4254 1.070289 CTAACCGATCCAACCCTAGCC 59.930 57.143 0.00 0.00 0.00 3.93
3883 4255 1.968050 AACCGATCCAACCCTAGCCG 61.968 60.000 0.00 0.00 0.00 5.52
3884 4256 2.280186 CGATCCAACCCTAGCCGC 60.280 66.667 0.00 0.00 0.00 6.53
3885 4257 2.111251 GATCCAACCCTAGCCGCC 59.889 66.667 0.00 0.00 0.00 6.13
3886 4258 3.809374 GATCCAACCCTAGCCGCCG 62.809 68.421 0.00 0.00 0.00 6.46
3903 4275 4.021925 GCCTGACACTTCCGCCCT 62.022 66.667 0.00 0.00 0.00 5.19
3904 4276 2.046892 CCTGACACTTCCGCCCTG 60.047 66.667 0.00 0.00 0.00 4.45
3905 4277 2.743928 CTGACACTTCCGCCCTGC 60.744 66.667 0.00 0.00 0.00 4.85
3930 4302 4.475444 CCCTGGGGGCCTCGTCTA 62.475 72.222 4.27 0.00 35.35 2.59
3931 4303 3.155167 CCTGGGGGCCTCGTCTAC 61.155 72.222 0.84 0.00 0.00 2.59
3932 4304 2.363795 CTGGGGGCCTCGTCTACA 60.364 66.667 0.84 0.00 0.00 2.74
3933 4305 1.987855 CTGGGGGCCTCGTCTACAA 60.988 63.158 0.84 0.00 0.00 2.41
3934 4306 1.536907 TGGGGGCCTCGTCTACAAA 60.537 57.895 0.84 0.00 0.00 2.83
3935 4307 1.221021 GGGGGCCTCGTCTACAAAG 59.779 63.158 0.84 0.00 0.00 2.77
3936 4308 1.551019 GGGGGCCTCGTCTACAAAGT 61.551 60.000 0.84 0.00 0.00 2.66
3937 4309 0.391263 GGGGCCTCGTCTACAAAGTG 60.391 60.000 0.84 0.00 0.00 3.16
3938 4310 0.320697 GGGCCTCGTCTACAAAGTGT 59.679 55.000 0.84 0.00 0.00 3.55
4066 5440 2.684001 TGGCGATCAAAGTCCGTATT 57.316 45.000 0.00 0.00 0.00 1.89
4075 5449 6.976925 CGATCAAAGTCCGTATTAGTAAACCT 59.023 38.462 0.00 0.00 0.00 3.50
4085 5459 3.508744 TTAGTAAACCTAACCGCTCCG 57.491 47.619 0.00 0.00 30.55 4.63
4120 5633 2.713967 GCAATGCCATCACCGCCTT 61.714 57.895 0.00 0.00 0.00 4.35
4146 5659 2.496817 CACGTCTAGCCCTCCTGC 59.503 66.667 0.00 0.00 0.00 4.85
4217 5730 0.393132 GCCAAGGAGGAGTAGGCAAC 60.393 60.000 0.00 0.00 44.59 4.17
4240 5753 1.149401 GCCAGGCCATTCCTACCTC 59.851 63.158 5.01 0.00 45.52 3.85
4241 5754 1.348775 GCCAGGCCATTCCTACCTCT 61.349 60.000 5.01 0.00 45.52 3.69
4242 5755 0.471617 CCAGGCCATTCCTACCTCTG 59.528 60.000 5.01 0.00 45.52 3.35
4243 5756 1.500474 CAGGCCATTCCTACCTCTGA 58.500 55.000 5.01 0.00 45.52 3.27
4244 5757 1.415659 CAGGCCATTCCTACCTCTGAG 59.584 57.143 5.01 0.00 45.52 3.35
4245 5758 0.761802 GGCCATTCCTACCTCTGAGG 59.238 60.000 22.00 22.00 42.49 3.86
4246 5759 0.107643 GCCATTCCTACCTCTGAGGC 59.892 60.000 23.43 3.27 39.63 4.70
4247 5760 0.761802 CCATTCCTACCTCTGAGGCC 59.238 60.000 23.43 0.00 39.63 5.19
4248 5761 0.390860 CATTCCTACCTCTGAGGCCG 59.609 60.000 23.43 13.88 39.63 6.13
4249 5762 0.261991 ATTCCTACCTCTGAGGCCGA 59.738 55.000 23.43 12.99 39.63 5.54
4250 5763 0.395862 TTCCTACCTCTGAGGCCGAG 60.396 60.000 23.43 16.78 39.63 4.63
4254 5767 4.154347 CCTCTGAGGCCGAGGCAC 62.154 72.222 16.65 9.69 41.39 5.01
4255 5768 4.504916 CTCTGAGGCCGAGGCACG 62.505 72.222 16.65 0.00 44.11 5.34
4257 5770 4.069232 CTGAGGCCGAGGCACGAA 62.069 66.667 16.65 0.00 45.77 3.85
4258 5771 3.589654 CTGAGGCCGAGGCACGAAA 62.590 63.158 16.65 0.00 45.77 3.46
4259 5772 2.358247 GAGGCCGAGGCACGAAAA 60.358 61.111 16.65 0.00 45.77 2.29
4260 5773 1.964373 GAGGCCGAGGCACGAAAAA 60.964 57.895 16.65 0.00 45.77 1.94
4261 5774 1.912371 GAGGCCGAGGCACGAAAAAG 61.912 60.000 16.65 0.00 45.77 2.27
4262 5775 2.561373 GCCGAGGCACGAAAAAGG 59.439 61.111 9.58 0.00 45.77 3.11
4263 5776 1.964373 GCCGAGGCACGAAAAAGGA 60.964 57.895 9.58 0.00 45.77 3.36
4264 5777 1.512156 GCCGAGGCACGAAAAAGGAA 61.512 55.000 9.58 0.00 45.77 3.36
4265 5778 1.165270 CCGAGGCACGAAAAAGGAAT 58.835 50.000 5.74 0.00 45.77 3.01
4266 5779 1.539827 CCGAGGCACGAAAAAGGAATT 59.460 47.619 5.74 0.00 45.77 2.17
4267 5780 2.030274 CCGAGGCACGAAAAAGGAATTT 60.030 45.455 5.74 0.00 45.77 1.82
4268 5781 2.979813 CGAGGCACGAAAAAGGAATTTG 59.020 45.455 0.00 0.00 45.77 2.32
4269 5782 3.304391 CGAGGCACGAAAAAGGAATTTGA 60.304 43.478 0.00 0.00 45.77 2.69
4270 5783 4.615912 CGAGGCACGAAAAAGGAATTTGAT 60.616 41.667 0.00 0.00 45.77 2.57
4271 5784 5.213891 AGGCACGAAAAAGGAATTTGATT 57.786 34.783 0.00 0.00 0.00 2.57
4272 5785 4.990426 AGGCACGAAAAAGGAATTTGATTG 59.010 37.500 0.00 0.00 0.00 2.67
4273 5786 4.152223 GGCACGAAAAAGGAATTTGATTGG 59.848 41.667 0.00 0.00 0.00 3.16
4274 5787 4.152223 GCACGAAAAAGGAATTTGATTGGG 59.848 41.667 0.00 0.00 0.00 4.12
4275 5788 5.537188 CACGAAAAAGGAATTTGATTGGGA 58.463 37.500 0.00 0.00 0.00 4.37
4276 5789 6.165577 CACGAAAAAGGAATTTGATTGGGAT 58.834 36.000 0.00 0.00 0.00 3.85
4277 5790 6.650390 CACGAAAAAGGAATTTGATTGGGATT 59.350 34.615 0.00 0.00 0.00 3.01
4278 5791 6.873605 ACGAAAAAGGAATTTGATTGGGATTC 59.126 34.615 0.00 0.00 0.00 2.52
4279 5792 6.313658 CGAAAAAGGAATTTGATTGGGATTCC 59.686 38.462 6.29 6.29 45.87 3.01
4280 5793 5.698741 AAAGGAATTTGATTGGGATTCCC 57.301 39.130 15.40 15.40 46.41 3.97
4292 5805 0.399833 GGATTCCCCCTCTGATGAGC 59.600 60.000 0.00 0.00 38.93 4.26
4293 5806 1.433121 GATTCCCCCTCTGATGAGCT 58.567 55.000 0.00 0.00 38.93 4.09
4294 5807 1.347378 GATTCCCCCTCTGATGAGCTC 59.653 57.143 6.82 6.82 38.93 4.09
4295 5808 0.341258 TTCCCCCTCTGATGAGCTCT 59.659 55.000 16.19 0.00 38.93 4.09
4296 5809 0.341258 TCCCCCTCTGATGAGCTCTT 59.659 55.000 16.19 8.82 38.93 2.85
4297 5810 0.469070 CCCCCTCTGATGAGCTCTTG 59.531 60.000 16.19 2.56 38.93 3.02
4298 5811 0.469070 CCCCTCTGATGAGCTCTTGG 59.531 60.000 16.19 6.03 38.93 3.61
4299 5812 1.493861 CCCTCTGATGAGCTCTTGGA 58.506 55.000 16.19 8.23 38.93 3.53
4300 5813 1.138661 CCCTCTGATGAGCTCTTGGAC 59.861 57.143 16.19 2.60 38.93 4.02
4301 5814 1.829849 CCTCTGATGAGCTCTTGGACA 59.170 52.381 16.19 6.94 38.93 4.02
4302 5815 2.235650 CCTCTGATGAGCTCTTGGACAA 59.764 50.000 16.19 0.00 38.93 3.18
4303 5816 3.523547 CTCTGATGAGCTCTTGGACAAG 58.476 50.000 16.19 5.72 35.29 3.16
4304 5817 2.008329 CTGATGAGCTCTTGGACAAGC 58.992 52.381 16.19 0.00 38.28 4.01
4305 5818 1.348696 TGATGAGCTCTTGGACAAGCA 59.651 47.619 16.19 0.00 41.06 3.91
4306 5819 2.008329 GATGAGCTCTTGGACAAGCAG 58.992 52.381 16.19 7.05 41.06 4.24
4307 5820 0.035881 TGAGCTCTTGGACAAGCAGG 59.964 55.000 16.19 2.13 41.06 4.85
4308 5821 0.322975 GAGCTCTTGGACAAGCAGGA 59.677 55.000 6.43 0.00 41.06 3.86
4309 5822 0.990374 AGCTCTTGGACAAGCAGGAT 59.010 50.000 7.18 0.00 41.06 3.24
4310 5823 1.093159 GCTCTTGGACAAGCAGGATG 58.907 55.000 7.18 0.00 38.42 3.51
4311 5824 1.339438 GCTCTTGGACAAGCAGGATGA 60.339 52.381 7.18 0.00 38.34 2.92
4312 5825 2.354259 CTCTTGGACAAGCAGGATGAC 58.646 52.381 7.18 0.00 38.34 3.06
4313 5826 1.980765 TCTTGGACAAGCAGGATGACT 59.019 47.619 7.18 0.00 38.34 3.41
4314 5827 3.173151 TCTTGGACAAGCAGGATGACTA 58.827 45.455 7.18 0.00 38.34 2.59
4315 5828 3.196469 TCTTGGACAAGCAGGATGACTAG 59.804 47.826 7.18 0.00 38.34 2.57
4316 5829 2.540383 TGGACAAGCAGGATGACTAGT 58.460 47.619 0.00 0.00 39.69 2.57
4317 5830 2.906389 TGGACAAGCAGGATGACTAGTT 59.094 45.455 0.00 0.00 39.69 2.24
4318 5831 3.327757 TGGACAAGCAGGATGACTAGTTT 59.672 43.478 0.00 0.00 39.69 2.66
4319 5832 4.530553 TGGACAAGCAGGATGACTAGTTTA 59.469 41.667 0.00 0.00 39.69 2.01
4344 5857 6.609212 AGCATCTGGAGAGTTTGAACTATCTA 59.391 38.462 15.61 10.39 44.47 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 6.490566 AAAACTCACCGGTTAATACACATC 57.509 37.500 2.97 0.00 0.00 3.06
89 90 9.319143 CAACTCACTAGAAGAAAGAAAAAGAGA 57.681 33.333 0.00 0.00 0.00 3.10
122 123 5.240623 TCTCGTTGAATGGTACTGCAATTTT 59.759 36.000 0.00 0.00 0.00 1.82
129 130 3.868757 TCCTCTCGTTGAATGGTACTG 57.131 47.619 0.00 0.00 0.00 2.74
146 147 8.446599 TTTCAGAAAATAAAACTCGTCTTCCT 57.553 30.769 0.00 0.00 0.00 3.36
152 153 6.996282 TCCTCCTTTCAGAAAATAAAACTCGT 59.004 34.615 0.00 0.00 0.00 4.18
153 154 7.387948 TCTCCTCCTTTCAGAAAATAAAACTCG 59.612 37.037 0.00 0.00 0.00 4.18
156 157 7.665974 TCCTCTCCTCCTTTCAGAAAATAAAAC 59.334 37.037 0.00 0.00 0.00 2.43
157 158 7.755618 TCCTCTCCTCCTTTCAGAAAATAAAA 58.244 34.615 0.00 0.00 0.00 1.52
158 159 7.329746 TCCTCTCCTCCTTTCAGAAAATAAA 57.670 36.000 0.00 0.00 0.00 1.40
159 160 6.952605 TCCTCTCCTCCTTTCAGAAAATAA 57.047 37.500 0.00 0.00 0.00 1.40
160 161 6.730977 TCTTCCTCTCCTCCTTTCAGAAAATA 59.269 38.462 0.00 0.00 0.00 1.40
161 162 5.549619 TCTTCCTCTCCTCCTTTCAGAAAAT 59.450 40.000 0.00 0.00 0.00 1.82
162 163 4.907875 TCTTCCTCTCCTCCTTTCAGAAAA 59.092 41.667 0.00 0.00 0.00 2.29
163 164 4.284746 GTCTTCCTCTCCTCCTTTCAGAAA 59.715 45.833 0.00 0.00 0.00 2.52
164 165 3.835395 GTCTTCCTCTCCTCCTTTCAGAA 59.165 47.826 0.00 0.00 0.00 3.02
165 166 3.436243 GTCTTCCTCTCCTCCTTTCAGA 58.564 50.000 0.00 0.00 0.00 3.27
166 167 2.165437 CGTCTTCCTCTCCTCCTTTCAG 59.835 54.545 0.00 0.00 0.00 3.02
167 168 2.171840 CGTCTTCCTCTCCTCCTTTCA 58.828 52.381 0.00 0.00 0.00 2.69
168 169 2.425668 CTCGTCTTCCTCTCCTCCTTTC 59.574 54.545 0.00 0.00 0.00 2.62
169 170 2.225167 ACTCGTCTTCCTCTCCTCCTTT 60.225 50.000 0.00 0.00 0.00 3.11
170 171 1.356398 ACTCGTCTTCCTCTCCTCCTT 59.644 52.381 0.00 0.00 0.00 3.36
171 172 0.996583 ACTCGTCTTCCTCTCCTCCT 59.003 55.000 0.00 0.00 0.00 3.69
172 173 1.474879 CAACTCGTCTTCCTCTCCTCC 59.525 57.143 0.00 0.00 0.00 4.30
173 174 1.474879 CCAACTCGTCTTCCTCTCCTC 59.525 57.143 0.00 0.00 0.00 3.71
174 175 1.075698 TCCAACTCGTCTTCCTCTCCT 59.924 52.381 0.00 0.00 0.00 3.69
175 176 1.546961 TCCAACTCGTCTTCCTCTCC 58.453 55.000 0.00 0.00 0.00 3.71
176 177 3.243771 TGTTTCCAACTCGTCTTCCTCTC 60.244 47.826 0.00 0.00 0.00 3.20
177 178 2.698797 TGTTTCCAACTCGTCTTCCTCT 59.301 45.455 0.00 0.00 0.00 3.69
178 179 3.107642 TGTTTCCAACTCGTCTTCCTC 57.892 47.619 0.00 0.00 0.00 3.71
179 180 3.118371 ACTTGTTTCCAACTCGTCTTCCT 60.118 43.478 0.00 0.00 0.00 3.36
180 181 3.002348 CACTTGTTTCCAACTCGTCTTCC 59.998 47.826 0.00 0.00 0.00 3.46
181 182 3.002348 CCACTTGTTTCCAACTCGTCTTC 59.998 47.826 0.00 0.00 0.00 2.87
182 183 2.943033 CCACTTGTTTCCAACTCGTCTT 59.057 45.455 0.00 0.00 0.00 3.01
183 184 2.169769 TCCACTTGTTTCCAACTCGTCT 59.830 45.455 0.00 0.00 0.00 4.18
184 185 2.557317 TCCACTTGTTTCCAACTCGTC 58.443 47.619 0.00 0.00 0.00 4.20
185 186 2.702592 TCCACTTGTTTCCAACTCGT 57.297 45.000 0.00 0.00 0.00 4.18
186 187 2.287009 GCTTCCACTTGTTTCCAACTCG 60.287 50.000 0.00 0.00 0.00 4.18
187 188 2.952310 AGCTTCCACTTGTTTCCAACTC 59.048 45.455 0.00 0.00 0.00 3.01
188 189 2.689983 CAGCTTCCACTTGTTTCCAACT 59.310 45.455 0.00 0.00 0.00 3.16
189 190 2.687935 TCAGCTTCCACTTGTTTCCAAC 59.312 45.455 0.00 0.00 0.00 3.77
190 191 3.011566 TCAGCTTCCACTTGTTTCCAA 57.988 42.857 0.00 0.00 0.00 3.53
191 192 2.727123 TCAGCTTCCACTTGTTTCCA 57.273 45.000 0.00 0.00 0.00 3.53
192 193 4.590850 AATTCAGCTTCCACTTGTTTCC 57.409 40.909 0.00 0.00 0.00 3.13
193 194 6.144563 GCTAAAATTCAGCTTCCACTTGTTTC 59.855 38.462 5.05 0.00 36.07 2.78
194 195 5.985530 GCTAAAATTCAGCTTCCACTTGTTT 59.014 36.000 5.05 0.00 36.07 2.83
195 196 5.532557 GCTAAAATTCAGCTTCCACTTGTT 58.467 37.500 5.05 0.00 36.07 2.83
196 197 5.126396 GCTAAAATTCAGCTTCCACTTGT 57.874 39.130 5.05 0.00 36.07 3.16
211 212 9.962809 AGACGGAGATAGTATACTAGCTAAAAT 57.037 33.333 26.38 14.57 44.34 1.82
228 229 7.687941 ACAACATTTATTTCAAGACGGAGAT 57.312 32.000 0.00 0.00 0.00 2.75
229 230 7.227711 TCAACAACATTTATTTCAAGACGGAGA 59.772 33.333 0.00 0.00 0.00 3.71
296 297 9.920946 AGTGTCATTGATTTATTGGTATAACCT 57.079 29.630 0.00 0.00 39.58 3.50
313 314 9.919348 CCTTTTGTTTCAAAATAAGTGTCATTG 57.081 29.630 7.87 0.00 0.00 2.82
316 317 8.527810 ACTCCTTTTGTTTCAAAATAAGTGTCA 58.472 29.630 15.08 0.00 0.00 3.58
317 318 8.926715 ACTCCTTTTGTTTCAAAATAAGTGTC 57.073 30.769 15.08 0.00 0.00 3.67
361 362 1.961793 TGTTCAAAGCTGCTTACCGT 58.038 45.000 16.31 0.00 0.00 4.83
362 363 3.347958 TTTGTTCAAAGCTGCTTACCG 57.652 42.857 16.31 7.63 0.00 4.02
381 382 8.846943 TGGCGATGATATAGACAAATACATTT 57.153 30.769 0.00 0.00 0.00 2.32
393 394 4.790765 TGAGAGGTTGGCGATGATATAG 57.209 45.455 0.00 0.00 0.00 1.31
406 407 2.499289 ACGCTTCTGATCATGAGAGGTT 59.501 45.455 0.09 0.00 0.00 3.50
414 415 2.499289 AGTCAAGGACGCTTCTGATCAT 59.501 45.455 0.00 0.00 37.67 2.45
479 480 8.498054 AGGAAACTAGTCACACATAAATGATG 57.502 34.615 0.00 0.00 40.61 3.07
523 524 9.134055 TCTGCATCATTGACCAATAAAATATGA 57.866 29.630 0.00 0.00 0.00 2.15
635 648 5.102967 AGTACTATAACCAAACCCCAAGGA 58.897 41.667 0.00 0.00 36.73 3.36
655 671 8.224389 TCCATGTATTTACGCAACTACTAGTA 57.776 34.615 1.89 1.89 0.00 1.82
656 672 7.104043 TCCATGTATTTACGCAACTACTAGT 57.896 36.000 0.00 0.00 0.00 2.57
657 673 7.306632 GCTTCCATGTATTTACGCAACTACTAG 60.307 40.741 0.00 0.00 0.00 2.57
667 683 2.032894 CCGCAGCTTCCATGTATTTACG 60.033 50.000 0.00 0.00 0.00 3.18
751 769 0.400213 TTCCCATTCGGTTGCTGTCT 59.600 50.000 0.00 0.00 0.00 3.41
825 843 1.913451 TTACCCAAAACGATGCCGCG 61.913 55.000 0.00 0.00 39.95 6.46
935 1015 2.750237 GGGGAACGCCGCTGATTT 60.750 61.111 0.00 0.00 43.42 2.17
944 1024 4.452733 CGTCCTCTGGGGGAACGC 62.453 72.222 0.00 0.00 44.99 4.84
947 1027 2.678934 CGTCGTCCTCTGGGGGAA 60.679 66.667 0.00 0.00 37.10 3.97
948 1028 3.640257 CTCGTCGTCCTCTGGGGGA 62.640 68.421 0.00 0.00 35.33 4.81
952 1032 0.677098 TTCCTCTCGTCGTCCTCTGG 60.677 60.000 0.00 0.00 0.00 3.86
953 1033 1.131504 CTTTCCTCTCGTCGTCCTCTG 59.868 57.143 0.00 0.00 0.00 3.35
954 1034 1.455248 CTTTCCTCTCGTCGTCCTCT 58.545 55.000 0.00 0.00 0.00 3.69
955 1035 0.452585 CCTTTCCTCTCGTCGTCCTC 59.547 60.000 0.00 0.00 0.00 3.71
956 1036 0.037877 TCCTTTCCTCTCGTCGTCCT 59.962 55.000 0.00 0.00 0.00 3.85
957 1037 0.886563 TTCCTTTCCTCTCGTCGTCC 59.113 55.000 0.00 0.00 0.00 4.79
1106 1456 2.967397 CGGGCAGAGTTGGTACGA 59.033 61.111 0.00 0.00 0.00 3.43
1111 1461 2.509336 CTACGCGGGCAGAGTTGG 60.509 66.667 12.47 0.00 33.96 3.77
1114 1464 1.605058 AATCACTACGCGGGCAGAGT 61.605 55.000 12.47 2.34 36.63 3.24
1136 1486 2.113986 AGCCACCGCTTTGAGCTT 59.886 55.556 0.00 0.00 45.55 3.74
1207 1570 0.997932 GTGAGTTCAGATGAGCAGCG 59.002 55.000 0.00 0.00 0.00 5.18
1270 1637 8.468720 TGCAAGACATGAATTCATTGTATTTG 57.531 30.769 18.41 21.53 33.61 2.32
1277 1645 9.661563 ACAAATATTGCAAGACATGAATTCATT 57.338 25.926 18.41 10.05 33.61 2.57
1280 1648 9.962759 GAAACAAATATTGCAAGACATGAATTC 57.037 29.630 13.15 12.13 0.00 2.17
1295 1663 9.880157 CCTTCATTCATTCAGGAAACAAATATT 57.120 29.630 0.00 0.00 0.00 1.28
1424 1794 0.036388 TGTCCCTTGCACGGAAGATC 60.036 55.000 11.54 0.00 0.00 2.75
1590 1960 8.677870 ACATCCTCTGCTCCTAAATATAAGAT 57.322 34.615 0.00 0.00 0.00 2.40
1825 2196 6.061022 TGGCATAGAAGTACATTTCCAGAA 57.939 37.500 0.00 0.00 0.00 3.02
1866 2237 1.330234 TACCGTGCTAACAGACACCA 58.670 50.000 0.00 0.00 33.09 4.17
1867 2238 2.443887 TTACCGTGCTAACAGACACC 57.556 50.000 0.00 0.00 33.09 4.16
1868 2239 5.107133 ACATATTACCGTGCTAACAGACAC 58.893 41.667 0.00 0.00 0.00 3.67
1869 2240 5.333299 ACATATTACCGTGCTAACAGACA 57.667 39.130 0.00 0.00 0.00 3.41
1870 2241 4.743644 GGACATATTACCGTGCTAACAGAC 59.256 45.833 0.00 0.00 0.00 3.51
1871 2242 4.403113 TGGACATATTACCGTGCTAACAGA 59.597 41.667 0.00 0.00 0.00 3.41
1872 2243 4.689071 TGGACATATTACCGTGCTAACAG 58.311 43.478 0.00 0.00 0.00 3.16
1873 2244 4.739587 TGGACATATTACCGTGCTAACA 57.260 40.909 0.00 0.00 0.00 2.41
1874 2245 4.689345 GGATGGACATATTACCGTGCTAAC 59.311 45.833 0.00 0.00 32.19 2.34
1875 2246 4.345547 TGGATGGACATATTACCGTGCTAA 59.654 41.667 0.00 0.00 35.17 3.09
1876 2247 3.898741 TGGATGGACATATTACCGTGCTA 59.101 43.478 0.00 0.00 35.17 3.49
1877 2248 2.703536 TGGATGGACATATTACCGTGCT 59.296 45.455 0.00 0.00 35.17 4.40
1878 2249 3.120321 TGGATGGACATATTACCGTGC 57.880 47.619 0.00 0.00 34.79 5.34
1879 2250 6.148811 GGTTAATGGATGGACATATTACCGTG 59.851 42.308 0.00 0.00 0.00 4.94
1880 2251 6.235664 GGTTAATGGATGGACATATTACCGT 58.764 40.000 0.00 0.00 0.00 4.83
1881 2252 5.350365 CGGTTAATGGATGGACATATTACCG 59.650 44.000 0.00 0.00 39.95 4.02
1882 2253 5.123344 GCGGTTAATGGATGGACATATTACC 59.877 44.000 0.00 0.00 0.00 2.85
1883 2254 5.938125 AGCGGTTAATGGATGGACATATTAC 59.062 40.000 0.00 0.00 0.00 1.89
1884 2255 6.121776 AGCGGTTAATGGATGGACATATTA 57.878 37.500 0.00 0.00 0.00 0.98
1885 2256 4.985538 AGCGGTTAATGGATGGACATATT 58.014 39.130 0.00 0.00 0.00 1.28
1886 2257 4.640771 AGCGGTTAATGGATGGACATAT 57.359 40.909 0.00 0.00 0.00 1.78
1887 2258 5.755409 ATAGCGGTTAATGGATGGACATA 57.245 39.130 0.00 0.00 0.00 2.29
1888 2259 4.640771 ATAGCGGTTAATGGATGGACAT 57.359 40.909 0.00 0.00 0.00 3.06
1889 2260 4.431416 AATAGCGGTTAATGGATGGACA 57.569 40.909 0.00 0.00 0.00 4.02
1890 2261 5.067283 ACAAAATAGCGGTTAATGGATGGAC 59.933 40.000 0.00 0.00 0.00 4.02
1891 2262 5.197451 ACAAAATAGCGGTTAATGGATGGA 58.803 37.500 0.00 0.00 0.00 3.41
1892 2263 5.514274 ACAAAATAGCGGTTAATGGATGG 57.486 39.130 0.00 0.00 0.00 3.51
1893 2264 5.007234 TCGACAAAATAGCGGTTAATGGATG 59.993 40.000 0.00 0.00 0.00 3.51
1894 2265 5.120399 TCGACAAAATAGCGGTTAATGGAT 58.880 37.500 0.00 0.00 0.00 3.41
1895 2266 4.505808 TCGACAAAATAGCGGTTAATGGA 58.494 39.130 0.00 0.00 0.00 3.41
1896 2267 4.868450 TCGACAAAATAGCGGTTAATGG 57.132 40.909 0.00 0.00 0.00 3.16
1897 2268 7.906010 TGTATTTCGACAAAATAGCGGTTAATG 59.094 33.333 0.00 0.00 39.83 1.90
1898 2269 7.976826 TGTATTTCGACAAAATAGCGGTTAAT 58.023 30.769 0.00 0.00 39.83 1.40
1899 2270 7.361889 TGTATTTCGACAAAATAGCGGTTAA 57.638 32.000 0.00 0.00 39.83 2.01
1905 2276 6.619801 ATCCCTGTATTTCGACAAAATAGC 57.380 37.500 0.00 0.00 39.83 2.97
1965 2336 2.367202 TAGGCCTACAGGTGCAGCC 61.367 63.158 8.91 7.60 44.20 4.85
2021 2392 6.255453 CAGATAGTCTAAAAGCAGAGCAAGTC 59.745 42.308 0.00 0.00 0.00 3.01
2173 2545 4.153835 GCGGACAGCGATAGTATACTAGTT 59.846 45.833 17.31 2.40 35.41 2.24
2174 2546 3.683822 GCGGACAGCGATAGTATACTAGT 59.316 47.826 17.31 9.59 35.41 2.57
2188 2560 2.171489 GAGTGTTTTCCGCGGACAGC 62.171 60.000 31.19 24.74 43.95 4.40
2336 2708 6.265196 TGAATAGCAAATTCTGACAGTGGTTT 59.735 34.615 1.59 0.16 0.00 3.27
2349 2721 6.704289 TTAGAGCAGCATGAATAGCAAATT 57.296 33.333 0.00 0.00 39.69 1.82
2734 3106 5.683876 ACAAGTGACTAGTAGAATGGCAT 57.316 39.130 3.59 0.00 0.00 4.40
2811 3183 4.191544 TGTTATGGAAAGGAGAAGCATCG 58.808 43.478 0.00 0.00 0.00 3.84
2849 3221 5.409520 TCATCTGCAACAACTGAGTATTGAC 59.590 40.000 12.24 5.71 0.00 3.18
3063 3435 7.587629 AGAAAATACCGTAAAGCTTTTACCAC 58.412 34.615 18.47 8.38 0.00 4.16
3165 3537 6.445357 TTTGTTTGGGTCTCTTTGAAGTAC 57.555 37.500 0.00 0.00 0.00 2.73
3330 3702 4.057428 GACGGTCCAGCACGCTCT 62.057 66.667 0.00 0.00 0.00 4.09
3460 3832 9.903682 ACATTCAAGTACTTTCTTCAAATCATG 57.096 29.630 5.07 0.00 0.00 3.07
3640 4012 9.787435 GACTACCAAATACATGTATCCCAAATA 57.213 33.333 18.52 6.59 0.00 1.40
3641 4013 8.502738 AGACTACCAAATACATGTATCCCAAAT 58.497 33.333 18.52 0.00 0.00 2.32
3642 4014 7.867921 AGACTACCAAATACATGTATCCCAAA 58.132 34.615 18.52 4.74 0.00 3.28
3643 4015 7.446106 AGACTACCAAATACATGTATCCCAA 57.554 36.000 18.52 3.77 0.00 4.12
3644 4016 7.234782 CCTAGACTACCAAATACATGTATCCCA 59.765 40.741 18.52 2.81 0.00 4.37
3645 4017 7.453752 TCCTAGACTACCAAATACATGTATCCC 59.546 40.741 18.52 3.11 0.00 3.85
3646 4018 8.418597 TCCTAGACTACCAAATACATGTATCC 57.581 38.462 18.52 2.21 0.00 2.59
3650 4022 8.548877 ACAAATCCTAGACTACCAAATACATGT 58.451 33.333 2.69 2.69 0.00 3.21
3651 4023 8.964476 ACAAATCCTAGACTACCAAATACATG 57.036 34.615 0.00 0.00 0.00 3.21
3656 4028 7.931948 CGGATTACAAATCCTAGACTACCAAAT 59.068 37.037 14.93 0.00 36.07 2.32
3657 4029 7.093201 ACGGATTACAAATCCTAGACTACCAAA 60.093 37.037 14.93 0.00 36.07 3.28
3658 4030 6.381994 ACGGATTACAAATCCTAGACTACCAA 59.618 38.462 14.93 0.00 36.07 3.67
3659 4031 5.895534 ACGGATTACAAATCCTAGACTACCA 59.104 40.000 14.93 0.00 36.07 3.25
3660 4032 6.264970 AGACGGATTACAAATCCTAGACTACC 59.735 42.308 14.93 0.00 36.07 3.18
3661 4033 7.274603 AGACGGATTACAAATCCTAGACTAC 57.725 40.000 14.93 1.81 36.07 2.73
3662 4034 6.489361 GGAGACGGATTACAAATCCTAGACTA 59.511 42.308 14.93 0.00 36.07 2.59
3663 4035 5.302313 GGAGACGGATTACAAATCCTAGACT 59.698 44.000 14.93 7.41 36.07 3.24
3664 4036 5.302313 AGGAGACGGATTACAAATCCTAGAC 59.698 44.000 14.93 3.51 33.99 2.59
3665 4037 5.302059 CAGGAGACGGATTACAAATCCTAGA 59.698 44.000 14.93 0.00 33.99 2.43
3666 4038 5.533482 CAGGAGACGGATTACAAATCCTAG 58.467 45.833 14.93 4.99 33.99 3.02
3667 4039 4.202223 GCAGGAGACGGATTACAAATCCTA 60.202 45.833 14.93 0.00 33.99 2.94
3668 4040 3.432326 GCAGGAGACGGATTACAAATCCT 60.432 47.826 14.93 4.34 36.12 3.24
3669 4041 2.872858 GCAGGAGACGGATTACAAATCC 59.127 50.000 8.37 8.37 34.90 3.01
3670 4042 2.872858 GGCAGGAGACGGATTACAAATC 59.127 50.000 0.00 0.00 0.00 2.17
3671 4043 2.505819 AGGCAGGAGACGGATTACAAAT 59.494 45.455 0.00 0.00 0.00 2.32
3672 4044 1.906574 AGGCAGGAGACGGATTACAAA 59.093 47.619 0.00 0.00 0.00 2.83
3673 4045 1.568504 AGGCAGGAGACGGATTACAA 58.431 50.000 0.00 0.00 0.00 2.41
3674 4046 1.568504 AAGGCAGGAGACGGATTACA 58.431 50.000 0.00 0.00 0.00 2.41
3675 4047 3.574826 AGATAAGGCAGGAGACGGATTAC 59.425 47.826 0.00 0.00 0.00 1.89
3676 4048 3.827302 GAGATAAGGCAGGAGACGGATTA 59.173 47.826 0.00 0.00 0.00 1.75
3677 4049 2.630580 GAGATAAGGCAGGAGACGGATT 59.369 50.000 0.00 0.00 0.00 3.01
3678 4050 2.243810 GAGATAAGGCAGGAGACGGAT 58.756 52.381 0.00 0.00 0.00 4.18
3679 4051 1.693627 GAGATAAGGCAGGAGACGGA 58.306 55.000 0.00 0.00 0.00 4.69
3680 4052 0.676736 GGAGATAAGGCAGGAGACGG 59.323 60.000 0.00 0.00 0.00 4.79
3681 4053 1.339610 CTGGAGATAAGGCAGGAGACG 59.660 57.143 0.00 0.00 0.00 4.18
3682 4054 1.691434 CCTGGAGATAAGGCAGGAGAC 59.309 57.143 0.00 0.00 35.15 3.36
3683 4055 1.575788 TCCTGGAGATAAGGCAGGAGA 59.424 52.381 0.00 0.00 37.16 3.71
3684 4056 2.094100 TCCTGGAGATAAGGCAGGAG 57.906 55.000 0.00 0.00 37.16 3.69
3685 4057 1.575788 TCTCCTGGAGATAAGGCAGGA 59.424 52.381 22.30 0.00 39.49 3.86
3686 4058 1.969923 CTCTCCTGGAGATAAGGCAGG 59.030 57.143 25.82 8.72 44.45 4.85
3687 4059 1.969923 CCTCTCCTGGAGATAAGGCAG 59.030 57.143 25.82 12.58 44.45 4.85
3688 4060 2.036929 GCCTCTCCTGGAGATAAGGCA 61.037 57.143 33.80 12.88 45.94 4.75
3689 4061 0.684535 GCCTCTCCTGGAGATAAGGC 59.315 60.000 29.01 29.01 44.45 4.35
3690 4062 2.397044 AGCCTCTCCTGGAGATAAGG 57.603 55.000 25.82 22.92 44.45 2.69
3691 4063 3.321682 CAGAAGCCTCTCCTGGAGATAAG 59.678 52.174 25.82 17.93 44.45 1.73
3692 4064 3.303938 CAGAAGCCTCTCCTGGAGATAA 58.696 50.000 25.82 5.14 44.45 1.75
3693 4065 2.246067 ACAGAAGCCTCTCCTGGAGATA 59.754 50.000 25.82 5.90 44.45 1.98
3694 4066 1.008206 ACAGAAGCCTCTCCTGGAGAT 59.992 52.381 25.82 11.94 44.45 2.75
3695 4067 0.411452 ACAGAAGCCTCTCCTGGAGA 59.589 55.000 24.27 24.27 44.45 3.71
3696 4068 0.823460 GACAGAAGCCTCTCCTGGAG 59.177 60.000 17.84 17.84 41.51 3.86
3697 4069 0.616111 GGACAGAAGCCTCTCCTGGA 60.616 60.000 0.00 0.00 32.52 3.86
3698 4070 0.617249 AGGACAGAAGCCTCTCCTGG 60.617 60.000 0.00 0.00 36.60 4.45
3699 4071 1.206849 GAAGGACAGAAGCCTCTCCTG 59.793 57.143 0.00 0.00 36.90 3.86
3700 4072 1.203237 TGAAGGACAGAAGCCTCTCCT 60.203 52.381 0.00 0.00 39.18 3.69
3701 4073 1.270907 TGAAGGACAGAAGCCTCTCC 58.729 55.000 0.00 0.00 33.76 3.71
3702 4074 2.301583 ACTTGAAGGACAGAAGCCTCTC 59.698 50.000 0.00 0.00 33.76 3.20
3703 4075 2.301583 GACTTGAAGGACAGAAGCCTCT 59.698 50.000 0.00 0.00 33.76 3.69
3704 4076 2.301583 AGACTTGAAGGACAGAAGCCTC 59.698 50.000 0.00 0.00 33.76 4.70
3705 4077 2.334023 AGACTTGAAGGACAGAAGCCT 58.666 47.619 0.00 0.00 37.35 4.58
3706 4078 2.810852 CAAGACTTGAAGGACAGAAGCC 59.189 50.000 9.76 0.00 0.00 4.35
3707 4079 3.471680 ACAAGACTTGAAGGACAGAAGC 58.528 45.455 21.95 0.00 0.00 3.86
3708 4080 5.848406 AGTACAAGACTTGAAGGACAGAAG 58.152 41.667 21.95 0.00 33.13 2.85
3709 4081 5.362717 TGAGTACAAGACTTGAAGGACAGAA 59.637 40.000 21.95 2.22 39.06 3.02
3710 4082 4.893524 TGAGTACAAGACTTGAAGGACAGA 59.106 41.667 21.95 2.79 39.06 3.41
3711 4083 5.201713 TGAGTACAAGACTTGAAGGACAG 57.798 43.478 21.95 0.00 39.06 3.51
3712 4084 5.607939 TTGAGTACAAGACTTGAAGGACA 57.392 39.130 21.95 11.26 39.06 4.02
3722 4094 9.694137 GGGTTGAGTATATATTGAGTACAAGAC 57.306 37.037 0.00 0.00 39.46 3.01
3723 4095 9.656323 AGGGTTGAGTATATATTGAGTACAAGA 57.344 33.333 0.00 0.00 39.46 3.02
3724 4096 9.915629 GAGGGTTGAGTATATATTGAGTACAAG 57.084 37.037 0.00 0.00 39.46 3.16
3725 4097 8.573885 CGAGGGTTGAGTATATATTGAGTACAA 58.426 37.037 0.00 0.00 40.42 2.41
3726 4098 7.176165 CCGAGGGTTGAGTATATATTGAGTACA 59.824 40.741 0.00 0.00 0.00 2.90
3727 4099 7.362747 CCCGAGGGTTGAGTATATATTGAGTAC 60.363 44.444 0.00 0.00 0.00 2.73
3728 4100 6.662234 CCCGAGGGTTGAGTATATATTGAGTA 59.338 42.308 0.00 0.00 0.00 2.59
3729 4101 5.480772 CCCGAGGGTTGAGTATATATTGAGT 59.519 44.000 0.00 0.00 0.00 3.41
3730 4102 5.105310 CCCCGAGGGTTGAGTATATATTGAG 60.105 48.000 7.48 0.00 38.25 3.02
3731 4103 4.775780 CCCCGAGGGTTGAGTATATATTGA 59.224 45.833 7.48 0.00 38.25 2.57
3732 4104 4.623171 GCCCCGAGGGTTGAGTATATATTG 60.623 50.000 7.48 0.00 46.51 1.90
3733 4105 3.518303 GCCCCGAGGGTTGAGTATATATT 59.482 47.826 7.48 0.00 46.51 1.28
3734 4106 3.105283 GCCCCGAGGGTTGAGTATATAT 58.895 50.000 7.48 0.00 46.51 0.86
3735 4107 2.111255 AGCCCCGAGGGTTGAGTATATA 59.889 50.000 7.48 0.00 46.51 0.86
3736 4108 1.132817 AGCCCCGAGGGTTGAGTATAT 60.133 52.381 7.48 0.00 46.51 0.86
3737 4109 0.263765 AGCCCCGAGGGTTGAGTATA 59.736 55.000 7.48 0.00 46.51 1.47
3738 4110 1.003051 AGCCCCGAGGGTTGAGTAT 59.997 57.895 7.48 0.00 46.51 2.12
3739 4111 1.684734 GAGCCCCGAGGGTTGAGTA 60.685 63.158 7.48 0.00 46.45 2.59
3740 4112 3.003763 GAGCCCCGAGGGTTGAGT 61.004 66.667 7.48 0.00 46.45 3.41
3741 4113 3.003173 TGAGCCCCGAGGGTTGAG 61.003 66.667 7.48 0.00 46.45 3.02
3742 4114 2.449967 TACTGAGCCCCGAGGGTTGA 62.450 60.000 7.48 0.00 46.45 3.18
3743 4115 1.550130 TTACTGAGCCCCGAGGGTTG 61.550 60.000 7.48 0.00 46.45 3.77
3744 4116 0.620700 ATTACTGAGCCCCGAGGGTT 60.621 55.000 7.48 4.58 46.45 4.11
3747 4119 1.410004 TGTATTACTGAGCCCCGAGG 58.590 55.000 0.00 0.00 0.00 4.63
3748 4120 2.028930 GGATGTATTACTGAGCCCCGAG 60.029 54.545 0.00 0.00 0.00 4.63
3749 4121 1.968493 GGATGTATTACTGAGCCCCGA 59.032 52.381 0.00 0.00 0.00 5.14
3750 4122 1.691976 TGGATGTATTACTGAGCCCCG 59.308 52.381 0.00 0.00 0.00 5.73
3751 4123 3.327757 TGATGGATGTATTACTGAGCCCC 59.672 47.826 0.00 0.00 0.00 5.80
3752 4124 4.623932 TGATGGATGTATTACTGAGCCC 57.376 45.455 0.00 0.00 0.00 5.19
3753 4125 6.940739 AGTATGATGGATGTATTACTGAGCC 58.059 40.000 0.00 0.00 0.00 4.70
3754 4126 7.038659 GGAGTATGATGGATGTATTACTGAGC 58.961 42.308 0.00 0.00 0.00 4.26
3755 4127 8.031864 GTGGAGTATGATGGATGTATTACTGAG 58.968 40.741 0.00 0.00 0.00 3.35
3756 4128 7.039011 GGTGGAGTATGATGGATGTATTACTGA 60.039 40.741 0.00 0.00 0.00 3.41
3757 4129 7.099764 GGTGGAGTATGATGGATGTATTACTG 58.900 42.308 0.00 0.00 0.00 2.74
3758 4130 6.787458 TGGTGGAGTATGATGGATGTATTACT 59.213 38.462 0.00 0.00 0.00 2.24
3759 4131 7.004555 TGGTGGAGTATGATGGATGTATTAC 57.995 40.000 0.00 0.00 0.00 1.89
3760 4132 7.625498 TTGGTGGAGTATGATGGATGTATTA 57.375 36.000 0.00 0.00 0.00 0.98
3761 4133 6.514012 TTGGTGGAGTATGATGGATGTATT 57.486 37.500 0.00 0.00 0.00 1.89
3762 4134 6.708885 ATTGGTGGAGTATGATGGATGTAT 57.291 37.500 0.00 0.00 0.00 2.29
3763 4135 6.329986 AGAATTGGTGGAGTATGATGGATGTA 59.670 38.462 0.00 0.00 0.00 2.29
3764 4136 5.133322 AGAATTGGTGGAGTATGATGGATGT 59.867 40.000 0.00 0.00 0.00 3.06
3765 4137 5.628130 AGAATTGGTGGAGTATGATGGATG 58.372 41.667 0.00 0.00 0.00 3.51
3766 4138 5.610132 AGAGAATTGGTGGAGTATGATGGAT 59.390 40.000 0.00 0.00 0.00 3.41
3767 4139 4.971282 AGAGAATTGGTGGAGTATGATGGA 59.029 41.667 0.00 0.00 0.00 3.41
3768 4140 5.071519 AGAGAGAATTGGTGGAGTATGATGG 59.928 44.000 0.00 0.00 0.00 3.51
3769 4141 6.172136 AGAGAGAATTGGTGGAGTATGATG 57.828 41.667 0.00 0.00 0.00 3.07
3770 4142 5.306678 GGAGAGAGAATTGGTGGAGTATGAT 59.693 44.000 0.00 0.00 0.00 2.45
3771 4143 4.651503 GGAGAGAGAATTGGTGGAGTATGA 59.348 45.833 0.00 0.00 0.00 2.15
3772 4144 4.202305 GGGAGAGAGAATTGGTGGAGTATG 60.202 50.000 0.00 0.00 0.00 2.39
3773 4145 3.970640 GGGAGAGAGAATTGGTGGAGTAT 59.029 47.826 0.00 0.00 0.00 2.12
3774 4146 3.012959 AGGGAGAGAGAATTGGTGGAGTA 59.987 47.826 0.00 0.00 0.00 2.59
3775 4147 2.192263 GGGAGAGAGAATTGGTGGAGT 58.808 52.381 0.00 0.00 0.00 3.85
3776 4148 2.433970 GAGGGAGAGAGAATTGGTGGAG 59.566 54.545 0.00 0.00 0.00 3.86
3777 4149 2.045047 AGAGGGAGAGAGAATTGGTGGA 59.955 50.000 0.00 0.00 0.00 4.02
3778 4150 2.476199 AGAGGGAGAGAGAATTGGTGG 58.524 52.381 0.00 0.00 0.00 4.61
3779 4151 3.517100 TGAAGAGGGAGAGAGAATTGGTG 59.483 47.826 0.00 0.00 0.00 4.17
3780 4152 3.796111 TGAAGAGGGAGAGAGAATTGGT 58.204 45.455 0.00 0.00 0.00 3.67
3781 4153 5.602145 AGTATGAAGAGGGAGAGAGAATTGG 59.398 44.000 0.00 0.00 0.00 3.16
3782 4154 6.323482 TGAGTATGAAGAGGGAGAGAGAATTG 59.677 42.308 0.00 0.00 0.00 2.32
3783 4155 6.439487 TGAGTATGAAGAGGGAGAGAGAATT 58.561 40.000 0.00 0.00 0.00 2.17
3784 4156 6.024563 TGAGTATGAAGAGGGAGAGAGAAT 57.975 41.667 0.00 0.00 0.00 2.40
3785 4157 5.458451 TGAGTATGAAGAGGGAGAGAGAA 57.542 43.478 0.00 0.00 0.00 2.87
3786 4158 5.372363 AGATGAGTATGAAGAGGGAGAGAGA 59.628 44.000 0.00 0.00 0.00 3.10
3787 4159 5.634118 AGATGAGTATGAAGAGGGAGAGAG 58.366 45.833 0.00 0.00 0.00 3.20
3788 4160 5.661503 AGATGAGTATGAAGAGGGAGAGA 57.338 43.478 0.00 0.00 0.00 3.10
3789 4161 6.462768 CCAAAGATGAGTATGAAGAGGGAGAG 60.463 46.154 0.00 0.00 0.00 3.20
3790 4162 5.365025 CCAAAGATGAGTATGAAGAGGGAGA 59.635 44.000 0.00 0.00 0.00 3.71
3791 4163 5.609423 CCAAAGATGAGTATGAAGAGGGAG 58.391 45.833 0.00 0.00 0.00 4.30
3792 4164 4.141620 GCCAAAGATGAGTATGAAGAGGGA 60.142 45.833 0.00 0.00 0.00 4.20
3793 4165 4.133078 GCCAAAGATGAGTATGAAGAGGG 58.867 47.826 0.00 0.00 0.00 4.30
3794 4166 3.806521 CGCCAAAGATGAGTATGAAGAGG 59.193 47.826 0.00 0.00 0.00 3.69
3795 4167 4.686972 TCGCCAAAGATGAGTATGAAGAG 58.313 43.478 0.00 0.00 0.00 2.85
3796 4168 4.736126 TCGCCAAAGATGAGTATGAAGA 57.264 40.909 0.00 0.00 0.00 2.87
3797 4169 5.052481 TGATCGCCAAAGATGAGTATGAAG 58.948 41.667 0.00 0.00 0.00 3.02
3798 4170 5.022282 TGATCGCCAAAGATGAGTATGAA 57.978 39.130 0.00 0.00 0.00 2.57
3799 4171 4.670896 TGATCGCCAAAGATGAGTATGA 57.329 40.909 0.00 0.00 0.00 2.15
3800 4172 5.739752 TTTGATCGCCAAAGATGAGTATG 57.260 39.130 0.00 0.00 39.65 2.39
3808 4180 9.618563 ACTGATACAGACTTTGATCGCCAAAGA 62.619 40.741 25.98 11.52 46.62 2.52
3810 4182 4.574892 TGATACAGACTTTGATCGCCAAA 58.425 39.130 3.47 3.47 42.07 3.28
3811 4183 4.183865 CTGATACAGACTTTGATCGCCAA 58.816 43.478 0.00 0.00 32.44 4.52
3812 4184 3.195610 ACTGATACAGACTTTGATCGCCA 59.804 43.478 5.76 0.00 35.18 5.69
3813 4185 3.786635 ACTGATACAGACTTTGATCGCC 58.213 45.455 5.76 0.00 35.18 5.54
3814 4186 6.237861 GGTTTACTGATACAGACTTTGATCGC 60.238 42.308 5.76 0.00 35.18 4.58
3815 4187 6.255887 GGGTTTACTGATACAGACTTTGATCG 59.744 42.308 5.76 0.00 35.18 3.69
3816 4188 7.103641 TGGGTTTACTGATACAGACTTTGATC 58.896 38.462 5.76 0.00 35.18 2.92
3817 4189 7.016153 TGGGTTTACTGATACAGACTTTGAT 57.984 36.000 5.76 0.00 35.18 2.57
3818 4190 6.428083 TGGGTTTACTGATACAGACTTTGA 57.572 37.500 5.76 0.00 35.18 2.69
3819 4191 6.072673 GGTTGGGTTTACTGATACAGACTTTG 60.073 42.308 5.76 0.00 35.18 2.77
3820 4192 6.002082 GGTTGGGTTTACTGATACAGACTTT 58.998 40.000 5.76 0.00 35.18 2.66
3821 4193 5.072600 TGGTTGGGTTTACTGATACAGACTT 59.927 40.000 5.76 0.00 35.18 3.01
3822 4194 4.595781 TGGTTGGGTTTACTGATACAGACT 59.404 41.667 5.76 0.00 35.18 3.24
3823 4195 4.694037 GTGGTTGGGTTTACTGATACAGAC 59.306 45.833 5.76 0.00 35.18 3.51
3824 4196 4.595781 AGTGGTTGGGTTTACTGATACAGA 59.404 41.667 5.76 0.00 35.18 3.41
3825 4197 4.906618 AGTGGTTGGGTTTACTGATACAG 58.093 43.478 0.00 0.00 37.52 2.74
3826 4198 4.263156 GGAGTGGTTGGGTTTACTGATACA 60.263 45.833 0.00 0.00 0.00 2.29
3827 4199 4.259356 GGAGTGGTTGGGTTTACTGATAC 58.741 47.826 0.00 0.00 0.00 2.24
3828 4200 3.055675 CGGAGTGGTTGGGTTTACTGATA 60.056 47.826 0.00 0.00 0.00 2.15
3829 4201 2.290071 CGGAGTGGTTGGGTTTACTGAT 60.290 50.000 0.00 0.00 0.00 2.90
3830 4202 1.071071 CGGAGTGGTTGGGTTTACTGA 59.929 52.381 0.00 0.00 0.00 3.41
3831 4203 1.202722 ACGGAGTGGTTGGGTTTACTG 60.203 52.381 0.00 0.00 42.51 2.74
3832 4204 1.134228 ACGGAGTGGTTGGGTTTACT 58.866 50.000 0.00 0.00 42.51 2.24
3833 4205 3.711937 ACGGAGTGGTTGGGTTTAC 57.288 52.632 0.00 0.00 42.51 2.01
3852 4224 0.032815 GATCGGTTAGGCTCTCCAGC 59.967 60.000 0.00 0.00 46.06 4.85
3853 4225 0.676736 GGATCGGTTAGGCTCTCCAG 59.323 60.000 0.00 0.00 33.74 3.86
3854 4226 0.032515 TGGATCGGTTAGGCTCTCCA 60.033 55.000 0.00 0.00 33.74 3.86
3855 4227 1.120530 TTGGATCGGTTAGGCTCTCC 58.879 55.000 0.00 0.00 0.00 3.71
3856 4228 1.202545 GGTTGGATCGGTTAGGCTCTC 60.203 57.143 0.00 0.00 0.00 3.20
3857 4229 0.831307 GGTTGGATCGGTTAGGCTCT 59.169 55.000 0.00 0.00 0.00 4.09
3858 4230 0.179054 GGGTTGGATCGGTTAGGCTC 60.179 60.000 0.00 0.00 0.00 4.70
3859 4231 0.620700 AGGGTTGGATCGGTTAGGCT 60.621 55.000 0.00 0.00 0.00 4.58
3860 4232 1.070289 CTAGGGTTGGATCGGTTAGGC 59.930 57.143 0.00 0.00 0.00 3.93
3861 4233 1.070289 GCTAGGGTTGGATCGGTTAGG 59.930 57.143 0.00 0.00 0.00 2.69
3862 4234 1.070289 GGCTAGGGTTGGATCGGTTAG 59.930 57.143 0.00 0.00 0.00 2.34
3863 4235 1.125633 GGCTAGGGTTGGATCGGTTA 58.874 55.000 0.00 0.00 0.00 2.85
3864 4236 1.912971 GGCTAGGGTTGGATCGGTT 59.087 57.895 0.00 0.00 0.00 4.44
3865 4237 2.432300 CGGCTAGGGTTGGATCGGT 61.432 63.158 0.00 0.00 0.00 4.69
3866 4238 2.421739 CGGCTAGGGTTGGATCGG 59.578 66.667 0.00 0.00 0.00 4.18
3867 4239 2.280186 GCGGCTAGGGTTGGATCG 60.280 66.667 0.00 0.00 0.00 3.69
3868 4240 2.111251 GGCGGCTAGGGTTGGATC 59.889 66.667 0.00 0.00 0.00 3.36
3869 4241 3.861797 CGGCGGCTAGGGTTGGAT 61.862 66.667 7.61 0.00 0.00 3.41
3886 4258 4.021925 AGGGCGGAAGTGTCAGGC 62.022 66.667 0.00 0.00 42.66 4.85
3887 4259 2.046892 CAGGGCGGAAGTGTCAGG 60.047 66.667 0.00 0.00 0.00 3.86
3888 4260 2.743928 GCAGGGCGGAAGTGTCAG 60.744 66.667 0.00 0.00 0.00 3.51
3914 4286 3.155167 GTAGACGAGGCCCCCAGG 61.155 72.222 0.00 0.00 0.00 4.45
3915 4287 1.550130 TTTGTAGACGAGGCCCCCAG 61.550 60.000 0.00 0.00 0.00 4.45
3916 4288 1.536907 TTTGTAGACGAGGCCCCCA 60.537 57.895 0.00 0.00 0.00 4.96
3917 4289 1.221021 CTTTGTAGACGAGGCCCCC 59.779 63.158 0.00 0.00 0.00 5.40
3918 4290 0.391263 CACTTTGTAGACGAGGCCCC 60.391 60.000 0.00 0.00 0.00 5.80
3919 4291 0.320697 ACACTTTGTAGACGAGGCCC 59.679 55.000 0.00 0.00 0.00 5.80
3920 4292 1.000506 TGACACTTTGTAGACGAGGCC 59.999 52.381 0.00 0.00 0.00 5.19
3921 4293 2.433868 TGACACTTTGTAGACGAGGC 57.566 50.000 0.00 0.00 0.00 4.70
3922 4294 4.209288 CACTTTGACACTTTGTAGACGAGG 59.791 45.833 0.00 0.00 0.00 4.63
3923 4295 4.318121 GCACTTTGACACTTTGTAGACGAG 60.318 45.833 0.00 0.00 0.00 4.18
3924 4296 3.554324 GCACTTTGACACTTTGTAGACGA 59.446 43.478 0.00 0.00 0.00 4.20
3925 4297 3.303132 GGCACTTTGACACTTTGTAGACG 60.303 47.826 0.00 0.00 0.00 4.18
3926 4298 3.003378 GGGCACTTTGACACTTTGTAGAC 59.997 47.826 0.00 0.00 0.00 2.59
3927 4299 3.211045 GGGCACTTTGACACTTTGTAGA 58.789 45.455 0.00 0.00 0.00 2.59
3928 4300 2.948979 TGGGCACTTTGACACTTTGTAG 59.051 45.455 0.00 0.00 0.00 2.74
3929 4301 3.006112 TGGGCACTTTGACACTTTGTA 57.994 42.857 0.00 0.00 0.00 2.41
3930 4302 1.846007 TGGGCACTTTGACACTTTGT 58.154 45.000 0.00 0.00 0.00 2.83
3931 4303 2.957491 TTGGGCACTTTGACACTTTG 57.043 45.000 0.00 0.00 0.00 2.77
3932 4304 3.971245 TTTTGGGCACTTTGACACTTT 57.029 38.095 0.00 0.00 0.00 2.66
3933 4305 3.971245 TTTTTGGGCACTTTGACACTT 57.029 38.095 0.00 0.00 0.00 3.16
4061 5435 4.978580 GGAGCGGTTAGGTTTACTAATACG 59.021 45.833 0.00 0.00 43.20 3.06
4066 5440 2.164219 CACGGAGCGGTTAGGTTTACTA 59.836 50.000 0.00 0.00 0.00 1.82
4120 5633 2.571757 CTAGACGTGGCGCCTCAA 59.428 61.111 29.70 3.84 0.00 3.02
4179 5692 1.081242 CAAGGCATTGGCACGTGTC 60.081 57.895 14.58 14.58 43.71 3.67
4201 5714 0.905337 AGCGTTGCCTACTCCTCCTT 60.905 55.000 0.00 0.00 0.00 3.36
4217 5730 3.830192 GGAATGGCCTGGCAAGCG 61.830 66.667 22.05 0.00 0.00 4.68
4240 5753 3.589654 TTTCGTGCCTCGGCCTCAG 62.590 63.158 0.00 0.00 41.09 3.35
4241 5754 2.668185 TTTTTCGTGCCTCGGCCTCA 62.668 55.000 0.00 0.00 41.09 3.86
4242 5755 1.912371 CTTTTTCGTGCCTCGGCCTC 61.912 60.000 0.00 0.00 41.09 4.70
4243 5756 1.966451 CTTTTTCGTGCCTCGGCCT 60.966 57.895 0.00 0.00 41.09 5.19
4244 5757 2.561373 CTTTTTCGTGCCTCGGCC 59.439 61.111 5.33 0.00 41.09 6.13
4245 5758 1.512156 TTCCTTTTTCGTGCCTCGGC 61.512 55.000 0.00 0.00 40.32 5.54
4246 5759 1.165270 ATTCCTTTTTCGTGCCTCGG 58.835 50.000 0.00 0.00 40.32 4.63
4247 5760 2.979813 CAAATTCCTTTTTCGTGCCTCG 59.020 45.455 0.00 0.00 41.41 4.63
4248 5761 4.237349 TCAAATTCCTTTTTCGTGCCTC 57.763 40.909 0.00 0.00 0.00 4.70
4249 5762 4.871933 ATCAAATTCCTTTTTCGTGCCT 57.128 36.364 0.00 0.00 0.00 4.75
4250 5763 4.152223 CCAATCAAATTCCTTTTTCGTGCC 59.848 41.667 0.00 0.00 0.00 5.01
4251 5764 4.152223 CCCAATCAAATTCCTTTTTCGTGC 59.848 41.667 0.00 0.00 0.00 5.34
4252 5765 5.537188 TCCCAATCAAATTCCTTTTTCGTG 58.463 37.500 0.00 0.00 0.00 4.35
4253 5766 5.799827 TCCCAATCAAATTCCTTTTTCGT 57.200 34.783 0.00 0.00 0.00 3.85
4254 5767 6.313658 GGAATCCCAATCAAATTCCTTTTTCG 59.686 38.462 6.18 0.00 43.33 3.46
4255 5768 6.599244 GGGAATCCCAATCAAATTCCTTTTTC 59.401 38.462 14.67 0.00 45.13 2.29
4256 5769 6.484288 GGGAATCCCAATCAAATTCCTTTTT 58.516 36.000 14.67 0.00 45.13 1.94
4257 5770 6.065976 GGGAATCCCAATCAAATTCCTTTT 57.934 37.500 14.67 0.00 45.13 2.27
4258 5771 5.698741 GGGAATCCCAATCAAATTCCTTT 57.301 39.130 14.67 0.00 45.13 3.11
4273 5786 0.399833 GCTCATCAGAGGGGGAATCC 59.600 60.000 0.00 0.00 42.33 3.01
4274 5787 1.347378 GAGCTCATCAGAGGGGGAATC 59.653 57.143 9.40 0.00 42.33 2.52
4275 5788 1.061502 AGAGCTCATCAGAGGGGGAAT 60.062 52.381 17.77 0.00 42.33 3.01
4276 5789 0.341258 AGAGCTCATCAGAGGGGGAA 59.659 55.000 17.77 0.00 42.33 3.97
4277 5790 0.341258 AAGAGCTCATCAGAGGGGGA 59.659 55.000 17.77 0.00 42.33 4.81
4278 5791 0.469070 CAAGAGCTCATCAGAGGGGG 59.531 60.000 17.77 0.00 42.33 5.40
4279 5792 0.469070 CCAAGAGCTCATCAGAGGGG 59.531 60.000 17.77 0.00 42.33 4.79
4280 5793 1.138661 GTCCAAGAGCTCATCAGAGGG 59.861 57.143 17.77 0.86 42.33 4.30
4281 5794 1.829849 TGTCCAAGAGCTCATCAGAGG 59.170 52.381 17.77 8.02 42.33 3.69
4282 5795 3.523547 CTTGTCCAAGAGCTCATCAGAG 58.476 50.000 17.77 1.01 41.58 3.35
4283 5796 2.354503 GCTTGTCCAAGAGCTCATCAGA 60.355 50.000 17.77 4.03 40.79 3.27
4284 5797 2.008329 GCTTGTCCAAGAGCTCATCAG 58.992 52.381 17.77 1.40 40.79 2.90
4285 5798 1.348696 TGCTTGTCCAAGAGCTCATCA 59.651 47.619 17.77 4.48 40.79 3.07
4286 5799 2.008329 CTGCTTGTCCAAGAGCTCATC 58.992 52.381 17.77 1.80 40.79 2.92
4287 5800 1.339824 CCTGCTTGTCCAAGAGCTCAT 60.340 52.381 17.77 0.00 40.79 2.90
4288 5801 0.035881 CCTGCTTGTCCAAGAGCTCA 59.964 55.000 17.77 0.00 40.79 4.26
4289 5802 0.322975 TCCTGCTTGTCCAAGAGCTC 59.677 55.000 5.27 5.27 40.79 4.09
4290 5803 0.990374 ATCCTGCTTGTCCAAGAGCT 59.010 50.000 11.12 0.00 40.79 4.09
4291 5804 1.093159 CATCCTGCTTGTCCAAGAGC 58.907 55.000 11.12 0.00 40.79 4.09
4292 5805 2.027377 AGTCATCCTGCTTGTCCAAGAG 60.027 50.000 11.12 5.61 40.79 2.85
4293 5806 1.980765 AGTCATCCTGCTTGTCCAAGA 59.019 47.619 11.12 0.00 40.79 3.02
4294 5807 2.486472 AGTCATCCTGCTTGTCCAAG 57.514 50.000 2.63 2.63 41.24 3.61
4295 5808 2.906389 ACTAGTCATCCTGCTTGTCCAA 59.094 45.455 0.00 0.00 0.00 3.53
4296 5809 2.540383 ACTAGTCATCCTGCTTGTCCA 58.460 47.619 0.00 0.00 0.00 4.02
4297 5810 3.618690 AACTAGTCATCCTGCTTGTCC 57.381 47.619 0.00 0.00 0.00 4.02
4298 5811 4.568760 GCTAAACTAGTCATCCTGCTTGTC 59.431 45.833 0.00 0.00 0.00 3.18
4299 5812 4.020218 TGCTAAACTAGTCATCCTGCTTGT 60.020 41.667 0.00 0.00 0.00 3.16
4300 5813 4.507710 TGCTAAACTAGTCATCCTGCTTG 58.492 43.478 0.00 0.00 0.00 4.01
4301 5814 4.826274 TGCTAAACTAGTCATCCTGCTT 57.174 40.909 0.00 0.00 0.00 3.91
4302 5815 4.653341 AGATGCTAAACTAGTCATCCTGCT 59.347 41.667 15.21 0.00 38.72 4.24
4303 5816 4.749099 CAGATGCTAAACTAGTCATCCTGC 59.251 45.833 15.21 7.24 38.72 4.85
4304 5817 5.069648 TCCAGATGCTAAACTAGTCATCCTG 59.930 44.000 15.21 12.82 38.72 3.86
4305 5818 5.211973 TCCAGATGCTAAACTAGTCATCCT 58.788 41.667 15.21 4.49 38.72 3.24
4306 5819 5.303078 TCTCCAGATGCTAAACTAGTCATCC 59.697 44.000 15.21 2.77 38.72 3.51
4307 5820 6.040391 ACTCTCCAGATGCTAAACTAGTCATC 59.960 42.308 12.26 12.26 38.47 2.92
4308 5821 5.896678 ACTCTCCAGATGCTAAACTAGTCAT 59.103 40.000 0.00 0.00 0.00 3.06
4309 5822 5.265191 ACTCTCCAGATGCTAAACTAGTCA 58.735 41.667 0.00 0.00 0.00 3.41
4310 5823 5.845391 ACTCTCCAGATGCTAAACTAGTC 57.155 43.478 0.00 0.00 0.00 2.59
4311 5824 6.211584 TCAAACTCTCCAGATGCTAAACTAGT 59.788 38.462 0.00 0.00 0.00 2.57
4312 5825 6.634805 TCAAACTCTCCAGATGCTAAACTAG 58.365 40.000 0.00 0.00 0.00 2.57
4313 5826 6.605471 TCAAACTCTCCAGATGCTAAACTA 57.395 37.500 0.00 0.00 0.00 2.24
4314 5827 5.489792 TCAAACTCTCCAGATGCTAAACT 57.510 39.130 0.00 0.00 0.00 2.66
4315 5828 5.703130 AGTTCAAACTCTCCAGATGCTAAAC 59.297 40.000 0.00 0.00 32.86 2.01
4316 5829 5.869579 AGTTCAAACTCTCCAGATGCTAAA 58.130 37.500 0.00 0.00 32.86 1.85
4317 5830 5.489792 AGTTCAAACTCTCCAGATGCTAA 57.510 39.130 0.00 0.00 32.86 3.09
4318 5831 6.609212 AGATAGTTCAAACTCTCCAGATGCTA 59.391 38.462 0.00 0.00 40.37 3.49
4319 5832 5.424895 AGATAGTTCAAACTCTCCAGATGCT 59.575 40.000 0.00 0.00 40.37 3.79
4344 5857 7.387948 AGTTCAAACTCGATGCTAAACTAACAT 59.612 33.333 0.00 0.00 32.86 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.