Multiple sequence alignment - TraesCS6B01G194000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G194000 chr6B 100.000 6282 0 0 1 6282 228971691 228977972 0.000000e+00 11601.0
1 TraesCS6B01G194000 chr6B 97.115 104 3 0 338 441 548385870 548385767 6.470000e-40 176.0
2 TraesCS6B01G194000 chr6B 81.707 164 20 8 2010 2168 58285878 58286036 1.840000e-25 128.0
3 TraesCS6B01G194000 chr6B 91.781 73 5 1 378 450 566154056 566154127 4.010000e-17 100.0
4 TraesCS6B01G194000 chr6D 95.100 2898 113 14 2720 5603 131607949 131610831 0.000000e+00 4538.0
5 TraesCS6B01G194000 chr6D 92.060 932 38 15 441 1351 131606261 131607177 0.000000e+00 1279.0
6 TraesCS6B01G194000 chr6D 92.342 666 46 5 1350 2012 131607283 131607946 0.000000e+00 942.0
7 TraesCS6B01G194000 chr6D 88.560 507 37 10 5741 6246 131610824 131611310 4.190000e-166 595.0
8 TraesCS6B01G194000 chr6A 96.552 2059 55 9 2808 4860 169514079 169516127 0.000000e+00 3395.0
9 TraesCS6B01G194000 chr6A 91.760 1432 63 21 4856 6246 169522222 169523639 0.000000e+00 1940.0
10 TraesCS6B01G194000 chr6A 91.721 1389 79 15 648 2013 169506375 169507750 0.000000e+00 1895.0
11 TraesCS6B01G194000 chr6A 90.409 636 54 4 2720 3352 555436885 555437516 0.000000e+00 830.0
12 TraesCS6B01G194000 chr6A 92.784 388 16 7 1 387 526211409 526211785 9.200000e-153 551.0
13 TraesCS6B01G194000 chr6A 87.984 258 27 4 3738 3994 555438331 555438585 1.020000e-77 302.0
14 TraesCS6B01G194000 chr6A 90.000 210 20 1 1801 2010 555436672 555436880 2.890000e-68 270.0
15 TraesCS6B01G194000 chr6A 83.478 230 31 3 3993 4215 609801088 609800859 2.300000e-49 207.0
16 TraesCS6B01G194000 chr6A 95.556 90 4 0 2720 2809 169507752 169507841 1.830000e-30 145.0
17 TraesCS6B01G194000 chr3A 90.051 784 72 3 2720 3500 125443015 125443795 0.000000e+00 1011.0
18 TraesCS6B01G194000 chr3A 89.938 487 43 5 2016 2498 465417430 465416946 1.920000e-174 623.0
19 TraesCS6B01G194000 chr3A 90.498 442 23 11 1 441 460150530 460150953 3.290000e-157 566.0
20 TraesCS6B01G194000 chr3A 93.041 388 15 7 1 387 533975456 533975080 1.980000e-154 556.0
21 TraesCS6B01G194000 chr3A 88.031 259 27 4 3737 3994 125443788 125444043 2.850000e-78 303.0
22 TraesCS6B01G194000 chr3A 90.498 221 18 1 2490 2707 465416826 465416606 7.970000e-74 289.0
23 TraesCS6B01G194000 chr3A 89.048 210 22 1 1801 2010 125442802 125443010 6.250000e-65 259.0
24 TraesCS6B01G194000 chr4A 89.796 784 73 4 2720 3500 545881908 545881129 0.000000e+00 998.0
25 TraesCS6B01G194000 chr4A 87.259 259 29 4 3737 3994 545881136 545880881 6.160000e-75 292.0
26 TraesCS6B01G194000 chr4A 88.889 216 23 1 1801 2016 545882121 545881907 1.340000e-66 265.0
27 TraesCS6B01G194000 chr4A 93.204 103 7 0 3982 4084 545879422 545879320 1.090000e-32 152.0
28 TraesCS6B01G194000 chr4A 95.455 66 3 0 378 443 690141007 690141072 8.610000e-19 106.0
29 TraesCS6B01G194000 chr1B 88.564 787 77 6 2720 3493 30839942 30840728 0.000000e+00 942.0
30 TraesCS6B01G194000 chr1B 84.834 211 15 6 1801 2010 30839743 30839937 4.970000e-46 196.0
31 TraesCS6B01G194000 chr1B 93.939 66 4 0 378 443 36275261 36275326 4.010000e-17 100.0
32 TraesCS6B01G194000 chr4B 89.545 660 68 1 2808 3467 97557022 97556364 0.000000e+00 835.0
33 TraesCS6B01G194000 chr4B 84.577 201 15 3 1801 2001 97557427 97557243 1.080000e-42 185.0
34 TraesCS6B01G194000 chr4B 86.022 93 9 3 2720 2809 97557227 97557136 5.180000e-16 97.1
35 TraesCS6B01G194000 chr7A 94.572 479 24 1 2011 2489 4582604 4582128 0.000000e+00 739.0
36 TraesCS6B01G194000 chr7A 93.333 390 14 7 1 389 642898496 642898118 3.290000e-157 566.0
37 TraesCS6B01G194000 chr7A 91.837 245 11 2 2488 2723 4582065 4581821 3.630000e-87 333.0
38 TraesCS6B01G194000 chr7A 89.956 229 18 4 3511 3736 490270961 490271187 2.220000e-74 291.0
39 TraesCS6B01G194000 chr2A 91.314 449 18 5 2016 2464 33152955 33153382 1.510000e-165 593.0
40 TraesCS6B01G194000 chr2A 95.652 230 10 0 2488 2717 33153445 33153674 2.770000e-98 370.0
41 TraesCS6B01G194000 chr5A 92.765 387 17 7 1 387 495325528 495325903 3.310000e-152 549.0
42 TraesCS6B01G194000 chr5A 92.268 388 18 7 1 387 444921335 444920959 1.990000e-149 540.0
43 TraesCS6B01G194000 chr5A 91.795 390 19 8 1 389 688858173 688857796 1.200000e-146 531.0
44 TraesCS6B01G194000 chr1A 92.308 390 18 7 1 389 39823276 39822898 1.540000e-150 544.0
45 TraesCS6B01G194000 chr1A 87.266 267 23 8 3482 3746 402235360 402235617 1.710000e-75 294.0
46 TraesCS6B01G194000 chr1A 86.486 74 5 3 2235 2306 539747198 539747128 6.750000e-10 76.8
47 TraesCS6B01G194000 chr5B 92.708 384 15 8 3 385 687027733 687028104 5.540000e-150 542.0
48 TraesCS6B01G194000 chr5B 85.250 400 45 11 1 394 8526048 8525657 3.530000e-107 399.0
49 TraesCS6B01G194000 chr5B 95.522 67 3 0 378 444 115375674 115375740 2.390000e-19 108.0
50 TraesCS6B01G194000 chr5B 94.118 68 4 0 378 445 592861510 592861577 3.100000e-18 104.0
51 TraesCS6B01G194000 chr3D 88.750 240 22 4 3503 3740 394193435 394193671 7.970000e-74 289.0
52 TraesCS6B01G194000 chr1D 90.654 214 20 0 2504 2717 493787910 493788123 1.030000e-72 285.0
53 TraesCS6B01G194000 chr1D 84.859 284 29 8 2010 2284 493787322 493787600 2.230000e-69 274.0
54 TraesCS6B01G194000 chr1D 87.356 174 16 2 2322 2489 493787602 493787775 1.790000e-45 195.0
55 TraesCS6B01G194000 chr5D 87.083 240 27 4 3503 3742 551823730 551823965 1.040000e-67 268.0
56 TraesCS6B01G194000 chrUn 87.931 232 20 4 3500 3731 49812297 49812520 3.730000e-67 267.0
57 TraesCS6B01G194000 chr2D 86.722 241 26 6 3503 3743 23479854 23479620 4.830000e-66 263.0
58 TraesCS6B01G194000 chr7B 85.603 257 24 10 3490 3744 446140394 446140639 2.250000e-64 257.0
59 TraesCS6B01G194000 chr7B 82.090 134 17 5 2011 2141 686530153 686530282 2.390000e-19 108.0
60 TraesCS6B01G194000 chr2B 83.486 218 30 5 2013 2227 463708161 463708375 1.380000e-46 198.0
61 TraesCS6B01G194000 chr3B 81.013 158 20 9 2016 2168 96916317 96916469 3.980000e-22 117.0
62 TraesCS6B01G194000 chr3B 94.118 68 4 0 376 443 166155670 166155737 3.100000e-18 104.0
63 TraesCS6B01G194000 chr3B 94.030 67 4 0 378 444 726356188 726356254 1.110000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G194000 chr6B 228971691 228977972 6281 False 11601.000000 11601 100.000000 1 6282 1 chr6B.!!$F2 6281
1 TraesCS6B01G194000 chr6D 131606261 131611310 5049 False 1838.500000 4538 92.015500 441 6246 4 chr6D.!!$F1 5805
2 TraesCS6B01G194000 chr6A 169514079 169516127 2048 False 3395.000000 3395 96.552000 2808 4860 1 chr6A.!!$F1 2052
3 TraesCS6B01G194000 chr6A 169522222 169523639 1417 False 1940.000000 1940 91.760000 4856 6246 1 chr6A.!!$F2 1390
4 TraesCS6B01G194000 chr6A 169506375 169507841 1466 False 1020.000000 1895 93.638500 648 2809 2 chr6A.!!$F4 2161
5 TraesCS6B01G194000 chr6A 555436672 555438585 1913 False 467.333333 830 89.464333 1801 3994 3 chr6A.!!$F5 2193
6 TraesCS6B01G194000 chr3A 125442802 125444043 1241 False 524.333333 1011 89.043333 1801 3994 3 chr3A.!!$F2 2193
7 TraesCS6B01G194000 chr3A 465416606 465417430 824 True 456.000000 623 90.218000 2016 2707 2 chr3A.!!$R2 691
8 TraesCS6B01G194000 chr4A 545879320 545882121 2801 True 426.750000 998 89.787000 1801 4084 4 chr4A.!!$R1 2283
9 TraesCS6B01G194000 chr1B 30839743 30840728 985 False 569.000000 942 86.699000 1801 3493 2 chr1B.!!$F2 1692
10 TraesCS6B01G194000 chr4B 97556364 97557427 1063 True 372.366667 835 86.714667 1801 3467 3 chr4B.!!$R1 1666
11 TraesCS6B01G194000 chr7A 4581821 4582604 783 True 536.000000 739 93.204500 2011 2723 2 chr7A.!!$R2 712
12 TraesCS6B01G194000 chr2A 33152955 33153674 719 False 481.500000 593 93.483000 2016 2717 2 chr2A.!!$F1 701
13 TraesCS6B01G194000 chr1D 493787322 493788123 801 False 251.333333 285 87.623000 2010 2717 3 chr1D.!!$F1 707

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
155 156 0.039074 GACACCGCCGAGGATGATAG 60.039 60.0 3.89 0.00 45.00 2.08 F
1175 1201 0.036294 CTCCTGTTCGGGTTCCTTCC 60.036 60.0 0.00 0.00 0.00 3.46 F
1673 1810 0.391228 TGTAGCTTTGCCGTGACTCA 59.609 50.0 0.00 0.00 0.00 3.41 F
2178 2331 0.456221 TCGAGCTCCCAGAAATCGAC 59.544 55.0 8.47 0.00 37.48 4.20 F
2933 3360 0.179078 CAGAGGCTCTGCTGGACATC 60.179 60.0 29.86 0.00 37.72 3.06 F
3705 4818 0.601841 CGTCAGGGCGGTGTTACTTT 60.602 55.0 0.00 0.00 0.00 2.66 F
3731 4844 2.094258 CACACGTGTGGCACTTATCATC 59.906 50.0 35.65 0.26 42.10 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1869 2007 0.030638 GACAAACAGCCACGCATTGT 59.969 50.000 0.00 0.0 35.82 2.71 R
2512 2807 0.178876 TCCCCATCTCCTGGTCAACA 60.179 55.000 0.00 0.0 44.30 3.33 R
2533 2831 1.142870 GCCCACACATAGCCCATCTAA 59.857 52.381 0.00 0.0 0.00 2.10 R
3501 4614 1.610624 CGTGTGGCACTTATCAGGGTT 60.611 52.381 19.83 0.0 31.34 4.11 R
4742 7328 1.112950 GGGTAGACAGCCCTAGTCAC 58.887 60.000 0.00 0.0 42.81 3.67 R
4758 7345 1.384643 GCCCATCTAGTCAGGGGGT 60.385 63.158 15.43 0.0 43.04 4.95 R
5310 7905 1.900245 TACAGACACAGCGTAGACCA 58.100 50.000 0.00 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.650369 GCGAGAAGCGGTTGGAAA 58.350 55.556 3.70 0.00 41.29 3.13
20 21 1.497722 GCGAGAAGCGGTTGGAAAG 59.502 57.895 3.70 0.00 41.29 2.62
21 22 1.912371 GCGAGAAGCGGTTGGAAAGG 61.912 60.000 3.70 0.00 41.29 3.11
22 23 1.876664 GAGAAGCGGTTGGAAAGGC 59.123 57.895 3.70 0.00 0.00 4.35
23 24 1.912371 GAGAAGCGGTTGGAAAGGCG 61.912 60.000 3.70 0.00 32.25 5.52
24 25 2.203294 AAGCGGTTGGAAAGGCGT 60.203 55.556 0.00 0.00 32.25 5.68
25 26 2.183858 GAAGCGGTTGGAAAGGCGTC 62.184 60.000 3.70 0.00 32.25 5.19
26 27 2.951475 AAGCGGTTGGAAAGGCGTCA 62.951 55.000 0.00 0.00 32.25 4.35
27 28 2.966309 GCGGTTGGAAAGGCGTCAG 61.966 63.158 0.00 0.00 0.00 3.51
28 29 2.954611 GGTTGGAAAGGCGTCAGC 59.045 61.111 0.00 0.00 44.18 4.26
29 30 2.556287 GTTGGAAAGGCGTCAGCG 59.444 61.111 0.00 0.00 46.35 5.18
30 31 2.668212 TTGGAAAGGCGTCAGCGG 60.668 61.111 0.00 0.00 46.35 5.52
31 32 3.171828 TTGGAAAGGCGTCAGCGGA 62.172 57.895 0.00 0.00 46.35 5.54
32 33 2.358247 GGAAAGGCGTCAGCGGAA 60.358 61.111 0.00 0.00 46.35 4.30
33 34 2.391389 GGAAAGGCGTCAGCGGAAG 61.391 63.158 0.00 0.00 46.35 3.46
34 35 2.358737 AAAGGCGTCAGCGGAAGG 60.359 61.111 1.75 0.00 46.35 3.46
45 46 3.124921 CGGAAGGCGTTGGCGAAT 61.125 61.111 0.00 0.00 41.24 3.34
46 47 2.485122 GGAAGGCGTTGGCGAATG 59.515 61.111 0.00 0.00 41.24 2.67
47 48 2.202479 GAAGGCGTTGGCGAATGC 60.202 61.111 16.49 16.49 42.54 3.56
48 49 4.101790 AAGGCGTTGGCGAATGCG 62.102 61.111 17.88 3.51 43.98 4.73
58 59 2.809174 CGAATGCGCAGTCCGACA 60.809 61.111 29.77 0.00 40.02 4.35
59 60 2.167219 CGAATGCGCAGTCCGACAT 61.167 57.895 29.77 0.38 40.02 3.06
60 61 1.638467 GAATGCGCAGTCCGACATC 59.362 57.895 26.45 0.00 40.02 3.06
61 62 2.082437 GAATGCGCAGTCCGACATCG 62.082 60.000 26.45 4.82 40.02 3.84
62 63 2.835701 AATGCGCAGTCCGACATCGT 62.836 55.000 18.32 0.00 40.02 3.73
63 64 2.809601 GCGCAGTCCGACATCGTT 60.810 61.111 0.30 0.00 40.02 3.85
64 65 3.071459 GCGCAGTCCGACATCGTTG 62.071 63.158 0.30 0.00 40.02 4.10
65 66 2.778679 GCAGTCCGACATCGTTGC 59.221 61.111 0.40 4.07 37.74 4.17
66 67 2.027073 GCAGTCCGACATCGTTGCA 61.027 57.895 14.05 0.00 38.36 4.08
67 68 1.959899 GCAGTCCGACATCGTTGCAG 61.960 60.000 14.05 0.00 38.36 4.41
68 69 1.738099 AGTCCGACATCGTTGCAGC 60.738 57.895 0.40 0.00 37.74 5.25
69 70 2.027073 GTCCGACATCGTTGCAGCA 61.027 57.895 0.24 0.00 37.74 4.41
70 71 1.737735 TCCGACATCGTTGCAGCAG 60.738 57.895 0.24 0.00 37.74 4.24
71 72 2.743752 CCGACATCGTTGCAGCAGG 61.744 63.158 0.24 0.00 37.74 4.85
72 73 2.029288 CGACATCGTTGCAGCAGGT 61.029 57.895 0.24 0.00 34.11 4.00
73 74 1.499056 GACATCGTTGCAGCAGGTG 59.501 57.895 0.24 2.89 0.00 4.00
74 75 1.915614 GACATCGTTGCAGCAGGTGG 61.916 60.000 0.24 0.00 0.00 4.61
75 76 2.360350 ATCGTTGCAGCAGGTGGG 60.360 61.111 0.24 0.00 0.00 4.61
78 79 3.677648 GTTGCAGCAGGTGGGCAG 61.678 66.667 0.86 0.00 38.97 4.85
79 80 4.208403 TTGCAGCAGGTGGGCAGT 62.208 61.111 0.86 0.00 38.97 4.40
80 81 4.648626 TGCAGCAGGTGGGCAGTC 62.649 66.667 0.86 0.00 35.83 3.51
82 83 4.320456 CAGCAGGTGGGCAGTCGT 62.320 66.667 0.00 0.00 35.83 4.34
83 84 3.560251 AGCAGGTGGGCAGTCGTT 61.560 61.111 0.00 0.00 35.83 3.85
84 85 3.050275 GCAGGTGGGCAGTCGTTC 61.050 66.667 0.00 0.00 0.00 3.95
85 86 2.743718 CAGGTGGGCAGTCGTTCT 59.256 61.111 0.00 0.00 0.00 3.01
86 87 1.071471 CAGGTGGGCAGTCGTTCTT 59.929 57.895 0.00 0.00 0.00 2.52
87 88 0.951040 CAGGTGGGCAGTCGTTCTTC 60.951 60.000 0.00 0.00 0.00 2.87
88 89 1.070786 GGTGGGCAGTCGTTCTTCA 59.929 57.895 0.00 0.00 0.00 3.02
89 90 1.228657 GGTGGGCAGTCGTTCTTCAC 61.229 60.000 0.00 0.00 0.00 3.18
98 99 1.082561 CGTTCTTCACGTCGGACGA 60.083 57.895 34.40 12.64 46.05 4.20
99 100 0.453950 CGTTCTTCACGTCGGACGAT 60.454 55.000 34.40 17.13 46.05 3.73
100 101 0.982673 GTTCTTCACGTCGGACGATG 59.017 55.000 34.40 25.94 46.05 3.84
101 102 0.876399 TTCTTCACGTCGGACGATGA 59.124 50.000 34.40 27.47 46.05 2.92
102 103 1.092348 TCTTCACGTCGGACGATGAT 58.908 50.000 34.40 11.49 46.05 2.45
103 104 1.063616 TCTTCACGTCGGACGATGATC 59.936 52.381 34.40 0.00 46.05 2.92
104 105 0.247934 TTCACGTCGGACGATGATCG 60.248 55.000 34.40 14.01 46.05 3.69
105 106 1.654440 CACGTCGGACGATGATCGG 60.654 63.158 34.40 11.88 46.05 4.18
106 107 2.110967 ACGTCGGACGATGATCGGT 61.111 57.895 34.40 8.82 46.05 4.69
107 108 1.654440 CGTCGGACGATGATCGGTG 60.654 63.158 25.29 8.22 46.05 4.94
108 109 1.299165 GTCGGACGATGATCGGTGG 60.299 63.158 19.82 7.31 45.59 4.61
109 110 2.658593 CGGACGATGATCGGTGGC 60.659 66.667 19.82 5.36 45.59 5.01
110 111 2.815308 GGACGATGATCGGTGGCT 59.185 61.111 19.82 0.00 45.59 4.75
111 112 1.592669 GGACGATGATCGGTGGCTG 60.593 63.158 19.82 0.00 45.59 4.85
112 113 1.592669 GACGATGATCGGTGGCTGG 60.593 63.158 19.82 0.00 45.59 4.85
113 114 2.016393 GACGATGATCGGTGGCTGGA 62.016 60.000 19.82 0.00 45.59 3.86
114 115 1.592669 CGATGATCGGTGGCTGGAC 60.593 63.158 7.00 0.00 36.00 4.02
115 116 1.522092 GATGATCGGTGGCTGGACA 59.478 57.895 0.00 0.00 0.00 4.02
116 117 0.107456 GATGATCGGTGGCTGGACAT 59.893 55.000 0.00 0.00 0.00 3.06
117 118 0.107456 ATGATCGGTGGCTGGACATC 59.893 55.000 0.00 0.00 0.00 3.06
118 119 0.977627 TGATCGGTGGCTGGACATCT 60.978 55.000 0.00 0.00 0.00 2.90
119 120 0.531532 GATCGGTGGCTGGACATCTG 60.532 60.000 0.00 0.00 0.00 2.90
120 121 1.976132 ATCGGTGGCTGGACATCTGG 61.976 60.000 0.00 0.00 0.00 3.86
121 122 2.439156 GGTGGCTGGACATCTGGC 60.439 66.667 0.00 0.00 39.69 4.85
122 123 2.673523 GTGGCTGGACATCTGGCT 59.326 61.111 0.00 0.00 39.90 4.75
123 124 1.626356 GGTGGCTGGACATCTGGCTA 61.626 60.000 0.00 0.00 39.90 3.93
124 125 0.179062 GTGGCTGGACATCTGGCTAG 60.179 60.000 0.00 0.00 39.90 3.42
125 126 0.325577 TGGCTGGACATCTGGCTAGA 60.326 55.000 0.82 0.82 39.90 2.43
126 127 0.105778 GGCTGGACATCTGGCTAGAC 59.894 60.000 0.13 0.00 32.79 2.59
127 128 0.826715 GCTGGACATCTGGCTAGACA 59.173 55.000 0.13 0.00 32.79 3.41
128 129 1.472376 GCTGGACATCTGGCTAGACAC 60.472 57.143 0.13 0.00 32.79 3.67
129 130 1.137872 CTGGACATCTGGCTAGACACC 59.862 57.143 0.13 6.98 32.79 4.16
130 131 1.273267 TGGACATCTGGCTAGACACCT 60.273 52.381 0.13 0.00 35.34 4.00
131 132 1.410882 GGACATCTGGCTAGACACCTC 59.589 57.143 0.13 0.00 35.34 3.85
132 133 1.066303 GACATCTGGCTAGACACCTCG 59.934 57.143 0.13 0.00 35.34 4.63
133 134 0.387202 CATCTGGCTAGACACCTCGG 59.613 60.000 0.13 0.00 35.34 4.63
134 135 0.259065 ATCTGGCTAGACACCTCGGA 59.741 55.000 0.13 0.00 35.34 4.55
135 136 0.680280 TCTGGCTAGACACCTCGGAC 60.680 60.000 0.00 0.00 0.00 4.79
136 137 1.994507 CTGGCTAGACACCTCGGACG 61.995 65.000 0.00 0.00 0.00 4.79
137 138 1.748122 GGCTAGACACCTCGGACGA 60.748 63.158 0.00 0.00 0.00 4.20
138 139 1.428620 GCTAGACACCTCGGACGAC 59.571 63.158 0.00 0.00 0.00 4.34
139 140 1.303799 GCTAGACACCTCGGACGACA 61.304 60.000 0.00 0.00 0.00 4.35
140 141 0.447011 CTAGACACCTCGGACGACAC 59.553 60.000 0.00 0.00 0.00 3.67
141 142 0.957395 TAGACACCTCGGACGACACC 60.957 60.000 0.00 0.00 0.00 4.16
150 151 3.823330 GACGACACCGCCGAGGAT 61.823 66.667 3.89 0.00 45.00 3.24
151 152 4.129737 ACGACACCGCCGAGGATG 62.130 66.667 3.89 1.99 45.00 3.51
152 153 3.822192 CGACACCGCCGAGGATGA 61.822 66.667 3.89 0.00 45.00 2.92
153 154 2.815308 GACACCGCCGAGGATGAT 59.185 61.111 3.89 0.00 45.00 2.45
154 155 1.792118 CGACACCGCCGAGGATGATA 61.792 60.000 3.89 0.00 45.00 2.15
155 156 0.039074 GACACCGCCGAGGATGATAG 60.039 60.000 3.89 0.00 45.00 2.08
156 157 1.373497 CACCGCCGAGGATGATAGC 60.373 63.158 3.89 0.00 45.00 2.97
157 158 2.126307 CCGCCGAGGATGATAGCG 60.126 66.667 0.00 0.00 45.00 4.26
160 161 3.041874 GCCGAGGATGATAGCGATG 57.958 57.895 0.00 0.00 0.00 3.84
161 162 0.459237 GCCGAGGATGATAGCGATGG 60.459 60.000 0.00 0.00 0.00 3.51
162 163 0.891373 CCGAGGATGATAGCGATGGT 59.109 55.000 0.00 0.00 0.00 3.55
163 164 1.403382 CCGAGGATGATAGCGATGGTG 60.403 57.143 0.00 0.00 0.00 4.17
164 165 1.541588 CGAGGATGATAGCGATGGTGA 59.458 52.381 0.00 0.00 0.00 4.02
165 166 2.165234 CGAGGATGATAGCGATGGTGAT 59.835 50.000 0.00 0.00 0.00 3.06
166 167 3.519579 GAGGATGATAGCGATGGTGATG 58.480 50.000 0.00 0.00 0.00 3.07
167 168 3.168292 AGGATGATAGCGATGGTGATGA 58.832 45.455 0.00 0.00 0.00 2.92
168 169 3.773667 AGGATGATAGCGATGGTGATGAT 59.226 43.478 0.00 0.00 0.00 2.45
169 170 3.869832 GGATGATAGCGATGGTGATGATG 59.130 47.826 0.00 0.00 0.00 3.07
170 171 4.382362 GGATGATAGCGATGGTGATGATGA 60.382 45.833 0.00 0.00 0.00 2.92
171 172 4.813750 TGATAGCGATGGTGATGATGAT 57.186 40.909 0.00 0.00 0.00 2.45
172 173 5.920193 TGATAGCGATGGTGATGATGATA 57.080 39.130 0.00 0.00 0.00 2.15
173 174 5.899299 TGATAGCGATGGTGATGATGATAG 58.101 41.667 0.00 0.00 0.00 2.08
174 175 2.969990 AGCGATGGTGATGATGATAGC 58.030 47.619 0.00 0.00 0.00 2.97
175 176 1.657594 GCGATGGTGATGATGATAGCG 59.342 52.381 0.00 0.00 0.00 4.26
176 177 2.672195 GCGATGGTGATGATGATAGCGA 60.672 50.000 0.00 0.00 0.00 4.93
177 178 2.919859 CGATGGTGATGATGATAGCGAC 59.080 50.000 0.00 0.00 0.00 5.19
178 179 3.366781 CGATGGTGATGATGATAGCGACT 60.367 47.826 0.00 0.00 0.00 4.18
179 180 4.564041 GATGGTGATGATGATAGCGACTT 58.436 43.478 0.00 0.00 0.00 3.01
180 181 5.619981 CGATGGTGATGATGATAGCGACTTA 60.620 44.000 0.00 0.00 0.00 2.24
181 182 5.126396 TGGTGATGATGATAGCGACTTAG 57.874 43.478 0.00 0.00 0.00 2.18
182 183 4.827284 TGGTGATGATGATAGCGACTTAGA 59.173 41.667 0.00 0.00 0.00 2.10
183 184 5.048434 TGGTGATGATGATAGCGACTTAGAG 60.048 44.000 0.00 0.00 0.00 2.43
184 185 5.048364 GGTGATGATGATAGCGACTTAGAGT 60.048 44.000 0.00 0.00 0.00 3.24
185 186 6.149640 GGTGATGATGATAGCGACTTAGAGTA 59.850 42.308 0.00 0.00 0.00 2.59
186 187 7.240674 GTGATGATGATAGCGACTTAGAGTAG 58.759 42.308 0.00 0.00 0.00 2.57
187 188 6.937465 TGATGATGATAGCGACTTAGAGTAGT 59.063 38.462 0.00 0.00 0.00 2.73
188 189 7.445707 TGATGATGATAGCGACTTAGAGTAGTT 59.554 37.037 0.00 0.00 0.00 2.24
189 190 7.569639 TGATGATAGCGACTTAGAGTAGTTT 57.430 36.000 0.00 0.00 0.00 2.66
190 191 7.640852 TGATGATAGCGACTTAGAGTAGTTTC 58.359 38.462 0.00 0.00 0.00 2.78
191 192 7.499563 TGATGATAGCGACTTAGAGTAGTTTCT 59.500 37.037 0.00 0.00 0.00 2.52
192 193 8.905660 ATGATAGCGACTTAGAGTAGTTTCTA 57.094 34.615 0.00 0.00 0.00 2.10
193 194 8.905660 TGATAGCGACTTAGAGTAGTTTCTAT 57.094 34.615 0.00 0.00 31.54 1.98
194 195 8.991026 TGATAGCGACTTAGAGTAGTTTCTATC 58.009 37.037 0.00 0.00 38.51 2.08
195 196 9.211485 GATAGCGACTTAGAGTAGTTTCTATCT 57.789 37.037 0.00 0.00 37.14 1.98
197 198 8.597662 AGCGACTTAGAGTAGTTTCTATCTAG 57.402 38.462 0.00 0.00 30.20 2.43
198 199 8.206189 AGCGACTTAGAGTAGTTTCTATCTAGT 58.794 37.037 0.00 0.00 30.20 2.57
199 200 8.829612 GCGACTTAGAGTAGTTTCTATCTAGTT 58.170 37.037 0.00 0.00 30.20 2.24
203 204 9.724839 CTTAGAGTAGTTTCTATCTAGTTGTGC 57.275 37.037 0.00 0.00 30.20 4.57
204 205 7.102847 AGAGTAGTTTCTATCTAGTTGTGCC 57.897 40.000 0.00 0.00 0.00 5.01
205 206 5.892568 AGTAGTTTCTATCTAGTTGTGCCG 58.107 41.667 0.00 0.00 0.00 5.69
206 207 4.803098 AGTTTCTATCTAGTTGTGCCGT 57.197 40.909 0.00 0.00 0.00 5.68
207 208 5.909621 AGTTTCTATCTAGTTGTGCCGTA 57.090 39.130 0.00 0.00 0.00 4.02
208 209 5.892568 AGTTTCTATCTAGTTGTGCCGTAG 58.107 41.667 0.00 0.00 0.00 3.51
209 210 5.418209 AGTTTCTATCTAGTTGTGCCGTAGT 59.582 40.000 0.00 0.00 0.00 2.73
210 211 5.909621 TTCTATCTAGTTGTGCCGTAGTT 57.090 39.130 0.00 0.00 0.00 2.24
211 212 5.909621 TCTATCTAGTTGTGCCGTAGTTT 57.090 39.130 0.00 0.00 0.00 2.66
212 213 7.395190 TTCTATCTAGTTGTGCCGTAGTTTA 57.605 36.000 0.00 0.00 0.00 2.01
213 214 7.578310 TCTATCTAGTTGTGCCGTAGTTTAT 57.422 36.000 0.00 0.00 0.00 1.40
214 215 7.646314 TCTATCTAGTTGTGCCGTAGTTTATC 58.354 38.462 0.00 0.00 0.00 1.75
215 216 5.909621 TCTAGTTGTGCCGTAGTTTATCT 57.090 39.130 0.00 0.00 0.00 1.98
216 217 7.578310 ATCTAGTTGTGCCGTAGTTTATCTA 57.422 36.000 0.00 0.00 0.00 1.98
217 218 7.578310 TCTAGTTGTGCCGTAGTTTATCTAT 57.422 36.000 0.00 0.00 0.00 1.98
218 219 7.423199 TCTAGTTGTGCCGTAGTTTATCTATG 58.577 38.462 0.00 0.00 35.91 2.23
219 220 4.809426 AGTTGTGCCGTAGTTTATCTATGC 59.191 41.667 0.00 0.00 35.08 3.14
220 221 4.665833 TGTGCCGTAGTTTATCTATGCT 57.334 40.909 0.00 0.00 35.08 3.79
221 222 5.018539 TGTGCCGTAGTTTATCTATGCTT 57.981 39.130 0.00 0.00 35.08 3.91
222 223 5.424757 TGTGCCGTAGTTTATCTATGCTTT 58.575 37.500 0.00 0.00 35.08 3.51
223 224 5.522460 TGTGCCGTAGTTTATCTATGCTTTC 59.478 40.000 0.00 0.00 35.08 2.62
224 225 4.743151 TGCCGTAGTTTATCTATGCTTTCG 59.257 41.667 0.00 0.00 35.08 3.46
225 226 4.980434 GCCGTAGTTTATCTATGCTTTCGA 59.020 41.667 0.00 0.00 35.08 3.71
226 227 5.461078 GCCGTAGTTTATCTATGCTTTCGAA 59.539 40.000 0.00 0.00 35.08 3.71
227 228 6.561717 GCCGTAGTTTATCTATGCTTTCGAAC 60.562 42.308 0.00 0.00 35.08 3.95
228 229 6.696148 CCGTAGTTTATCTATGCTTTCGAACT 59.304 38.462 0.00 0.00 35.08 3.01
229 230 7.859377 CCGTAGTTTATCTATGCTTTCGAACTA 59.141 37.037 0.00 0.00 35.08 2.24
230 231 9.395707 CGTAGTTTATCTATGCTTTCGAACTAT 57.604 33.333 0.00 0.00 32.84 2.12
239 240 9.727859 TCTATGCTTTCGAACTATCTATCTAGT 57.272 33.333 0.00 0.00 33.34 2.57
242 243 6.918569 TGCTTTCGAACTATCTATCTAGTTGC 59.081 38.462 0.00 0.28 41.00 4.17
243 244 6.918569 GCTTTCGAACTATCTATCTAGTTGCA 59.081 38.462 0.00 0.00 41.00 4.08
244 245 7.096394 GCTTTCGAACTATCTATCTAGTTGCAC 60.096 40.741 0.00 0.00 41.00 4.57
245 246 6.315091 TCGAACTATCTATCTAGTTGCACC 57.685 41.667 1.47 0.00 41.00 5.01
246 247 5.049612 TCGAACTATCTATCTAGTTGCACCG 60.050 44.000 1.47 0.34 41.00 4.94
247 248 5.049612 CGAACTATCTATCTAGTTGCACCGA 60.050 44.000 1.47 0.00 41.00 4.69
248 249 6.348622 CGAACTATCTATCTAGTTGCACCGAT 60.349 42.308 1.47 0.00 41.00 4.18
249 250 6.260870 ACTATCTATCTAGTTGCACCGATG 57.739 41.667 0.00 0.00 0.00 3.84
250 251 5.770663 ACTATCTATCTAGTTGCACCGATGT 59.229 40.000 0.00 0.00 0.00 3.06
251 252 6.940867 ACTATCTATCTAGTTGCACCGATGTA 59.059 38.462 0.00 0.00 0.00 2.29
252 253 6.650427 ATCTATCTAGTTGCACCGATGTAA 57.350 37.500 0.00 0.00 0.00 2.41
253 254 6.459670 TCTATCTAGTTGCACCGATGTAAA 57.540 37.500 0.00 0.00 31.71 2.01
254 255 6.869695 TCTATCTAGTTGCACCGATGTAAAA 58.130 36.000 0.00 0.00 31.71 1.52
255 256 7.497595 TCTATCTAGTTGCACCGATGTAAAAT 58.502 34.615 0.00 0.00 31.71 1.82
256 257 8.635328 TCTATCTAGTTGCACCGATGTAAAATA 58.365 33.333 0.00 0.00 31.71 1.40
257 258 6.897259 TCTAGTTGCACCGATGTAAAATAC 57.103 37.500 0.00 0.00 31.71 1.89
258 259 4.957759 AGTTGCACCGATGTAAAATACC 57.042 40.909 0.00 0.00 31.71 2.73
259 260 4.585879 AGTTGCACCGATGTAAAATACCT 58.414 39.130 0.00 0.00 31.71 3.08
260 261 5.007682 AGTTGCACCGATGTAAAATACCTT 58.992 37.500 0.00 0.00 31.71 3.50
261 262 5.475564 AGTTGCACCGATGTAAAATACCTTT 59.524 36.000 0.00 0.00 31.71 3.11
262 263 5.303747 TGCACCGATGTAAAATACCTTTG 57.696 39.130 0.00 0.00 0.00 2.77
263 264 4.762765 TGCACCGATGTAAAATACCTTTGT 59.237 37.500 0.00 0.00 0.00 2.83
264 265 5.938710 TGCACCGATGTAAAATACCTTTGTA 59.061 36.000 0.00 0.00 0.00 2.41
265 266 6.600032 TGCACCGATGTAAAATACCTTTGTAT 59.400 34.615 0.00 0.00 39.39 2.29
266 267 7.130269 GCACCGATGTAAAATACCTTTGTATC 58.870 38.462 0.00 0.00 36.65 2.24
267 268 7.342194 CACCGATGTAAAATACCTTTGTATCG 58.658 38.462 0.00 0.00 40.32 2.92
268 269 7.010738 CACCGATGTAAAATACCTTTGTATCGT 59.989 37.037 0.00 0.00 39.72 3.73
269 270 7.550196 ACCGATGTAAAATACCTTTGTATCGTT 59.450 33.333 0.00 0.00 39.72 3.85
270 271 8.392612 CCGATGTAAAATACCTTTGTATCGTTT 58.607 33.333 0.00 0.00 39.72 3.60
271 272 9.763465 CGATGTAAAATACCTTTGTATCGTTTT 57.237 29.630 0.00 0.00 38.28 2.43
343 344 2.760303 AAAAATATTTTGTGCGCGCG 57.240 40.000 28.44 28.44 0.00 6.86
344 345 0.365186 AAAATATTTTGTGCGCGCGC 59.635 45.000 45.02 45.02 42.35 6.86
345 346 1.728717 AAATATTTTGTGCGCGCGCG 61.729 50.000 45.73 45.73 45.51 6.86
358 359 3.307262 GCGCGCGCTGCATTTTAG 61.307 61.111 44.38 15.91 46.97 1.85
359 360 3.307262 CGCGCGCTGCATTTTAGC 61.307 61.111 30.48 6.56 46.97 3.09
365 366 2.793946 CTGCATTTTAGCGCGGCT 59.206 55.556 8.83 8.38 43.41 5.52
366 367 1.584483 CTGCATTTTAGCGCGGCTG 60.584 57.895 8.83 0.53 40.10 4.85
367 368 2.951227 GCATTTTAGCGCGGCTGC 60.951 61.111 8.83 7.70 40.10 5.25
369 370 1.584483 CATTTTAGCGCGGCTGCTG 60.584 57.895 22.96 10.42 46.70 4.41
370 371 2.764314 ATTTTAGCGCGGCTGCTGG 61.764 57.895 22.96 1.40 46.70 4.85
371 372 3.892740 TTTTAGCGCGGCTGCTGGA 62.893 57.895 22.96 12.50 46.70 3.86
372 373 4.819761 TTAGCGCGGCTGCTGGAG 62.820 66.667 22.96 0.14 46.70 3.86
399 400 3.913573 CGCGCGCGCTAACAGATT 61.914 61.111 45.97 0.00 39.32 2.40
400 401 2.399611 GCGCGCGCTAACAGATTT 59.600 55.556 44.38 0.00 38.26 2.17
401 402 1.226018 GCGCGCGCTAACAGATTTT 60.226 52.632 44.38 0.00 38.26 1.82
402 403 0.793104 GCGCGCGCTAACAGATTTTT 60.793 50.000 44.38 0.00 38.26 1.94
416 417 3.948380 TTTTTACACGCGGCGCTA 58.052 50.000 30.54 13.06 0.00 4.26
417 418 2.458162 TTTTTACACGCGGCGCTAT 58.542 47.368 30.54 15.36 0.00 2.97
418 419 1.638133 TTTTTACACGCGGCGCTATA 58.362 45.000 30.54 15.83 0.00 1.31
419 420 1.202203 TTTTACACGCGGCGCTATAG 58.798 50.000 30.54 16.68 0.00 1.31
420 421 1.210545 TTTACACGCGGCGCTATAGC 61.211 55.000 30.54 15.09 37.78 2.97
430 431 2.931386 GCTATAGCGCGGCTGTTG 59.069 61.111 9.40 6.33 40.10 3.33
431 432 2.598632 GCTATAGCGCGGCTGTTGG 61.599 63.158 9.40 1.78 40.10 3.77
432 433 1.067416 CTATAGCGCGGCTGTTGGA 59.933 57.895 8.83 0.00 40.10 3.53
433 434 0.941463 CTATAGCGCGGCTGTTGGAG 60.941 60.000 8.83 0.00 40.10 3.86
434 435 1.388837 TATAGCGCGGCTGTTGGAGA 61.389 55.000 8.83 0.00 40.10 3.71
435 436 2.032860 ATAGCGCGGCTGTTGGAGAT 62.033 55.000 8.83 0.00 40.10 2.75
436 437 2.906182 TAGCGCGGCTGTTGGAGATG 62.906 60.000 8.83 0.00 40.10 2.90
437 438 3.869272 CGCGGCTGTTGGAGATGC 61.869 66.667 0.00 0.00 0.00 3.91
438 439 2.437359 GCGGCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 0.00 3.79
439 440 2.467826 GCGGCTGTTGGAGATGCTC 61.468 63.158 0.00 0.00 0.00 4.26
459 460 7.843490 TGCTCTTATGTATGAACTTTGGTAC 57.157 36.000 0.00 0.00 0.00 3.34
474 475 9.716507 GAACTTTGGTACGTACTAAATATACGA 57.283 33.333 29.77 12.29 46.60 3.43
487 488 7.528307 ACTAAATATACGAGCTCGGTATGAAG 58.472 38.462 36.93 29.02 44.95 3.02
507 508 0.540923 GGATCTGCTCTGACCAAGCT 59.459 55.000 0.00 0.00 40.50 3.74
528 529 4.092821 GCTTCCCGCAAAATTCAAAATACC 59.907 41.667 0.00 0.00 38.92 2.73
534 535 6.400197 CCCGCAAAATTCAAAATACCGTAAAC 60.400 38.462 0.00 0.00 0.00 2.01
543 544 8.986039 TTCAAAATACCGTAAACGAGTTTTAC 57.014 30.769 6.53 0.00 44.33 2.01
568 569 0.947244 GACCGATTGCATGATCCACC 59.053 55.000 0.00 0.00 0.00 4.61
643 646 0.738762 CCGGCGCCTATCATCATCTG 60.739 60.000 26.68 3.45 0.00 2.90
646 649 1.357258 GCGCCTATCATCATCTGCCG 61.357 60.000 0.00 0.00 0.00 5.69
730 737 3.864686 CATTCAACCCGCGCTCCG 61.865 66.667 5.56 0.00 0.00 4.63
741 748 4.458164 CGCTCCGCAAAATCAACC 57.542 55.556 0.00 0.00 0.00 3.77
846 869 4.129148 AAATCCCCCGCCTCTGCC 62.129 66.667 0.00 0.00 0.00 4.85
862 885 0.045623 TGCCTCTTATTCCCTCCCCA 59.954 55.000 0.00 0.00 0.00 4.96
901 924 0.044092 ATTTTCCATTCCCCCACCCC 59.956 55.000 0.00 0.00 0.00 4.95
903 926 3.857746 TTCCATTCCCCCACCCCCA 62.858 63.158 0.00 0.00 0.00 4.96
905 928 4.074408 CATTCCCCCACCCCCACC 62.074 72.222 0.00 0.00 0.00 4.61
961 985 0.941463 CGCAGCGCTATCTAGGGTTG 60.941 60.000 10.99 11.95 45.62 3.77
1175 1201 0.036294 CTCCTGTTCGGGTTCCTTCC 60.036 60.000 0.00 0.00 0.00 3.46
1223 1249 3.120649 CGGTCCGATTCTGAGTTGTTTTC 60.121 47.826 4.91 0.00 0.00 2.29
1339 1365 1.676014 GCACGAGCAAGGTAAGACCAT 60.676 52.381 0.00 0.00 40.06 3.55
1374 1507 1.080093 CTGCTCTTACAACCCGCGA 60.080 57.895 8.23 0.00 0.00 5.87
1377 1510 1.205179 TGCTCTTACAACCCGCGATTA 59.795 47.619 8.23 0.00 0.00 1.75
1444 1577 3.160478 AAAGAGCCCCGGCCCTTTT 62.160 57.895 9.24 2.29 44.71 2.27
1558 1692 2.884894 ATAACGGATTCAGACGGACC 57.115 50.000 0.00 0.00 0.00 4.46
1563 1697 2.094338 ACGGATTCAGACGGACCTAAAC 60.094 50.000 0.00 0.00 0.00 2.01
1580 1717 5.932883 ACCTAAACTACTAGAAGCAAACTGC 59.067 40.000 0.00 0.00 45.46 4.40
1626 1763 4.381718 GGGACATCACTAGAAGTACACCAC 60.382 50.000 0.00 0.00 27.72 4.16
1639 1776 2.779755 ACACCACCGAGCAAATGATA 57.220 45.000 0.00 0.00 0.00 2.15
1664 1801 4.228912 ACTTGTGTTCATGTAGCTTTGC 57.771 40.909 0.00 0.00 31.62 3.68
1667 1804 1.535462 GTGTTCATGTAGCTTTGCCGT 59.465 47.619 0.00 0.00 0.00 5.68
1668 1805 1.535028 TGTTCATGTAGCTTTGCCGTG 59.465 47.619 0.00 0.00 0.00 4.94
1669 1806 1.804151 GTTCATGTAGCTTTGCCGTGA 59.196 47.619 0.00 0.00 0.00 4.35
1672 1809 1.394917 CATGTAGCTTTGCCGTGACTC 59.605 52.381 0.00 0.00 0.00 3.36
1673 1810 0.391228 TGTAGCTTTGCCGTGACTCA 59.609 50.000 0.00 0.00 0.00 3.41
1684 1821 1.854743 CCGTGACTCATAGAATGTGCG 59.145 52.381 0.00 0.00 0.00 5.34
1708 1845 6.072838 CGGCATGATCATAAGCTTACTTTCAT 60.073 38.462 8.70 13.36 37.33 2.57
1709 1846 7.082602 GGCATGATCATAAGCTTACTTTCATG 58.917 38.462 28.89 28.89 43.76 3.07
1778 1915 8.858003 AGTATTCTGTATTTCTGTGTCATACG 57.142 34.615 0.00 0.00 0.00 3.06
1782 1919 6.792326 TCTGTATTTCTGTGTCATACGGTAG 58.208 40.000 0.00 0.00 36.98 3.18
1793 1930 3.318275 GTCATACGGTAGAATGGAGCTGA 59.682 47.826 0.00 0.00 0.00 4.26
1799 1937 3.243569 CGGTAGAATGGAGCTGACTTAGG 60.244 52.174 0.00 0.00 0.00 2.69
1869 2007 5.359292 TGGAACACATTTTGATCTTGTCACA 59.641 36.000 0.00 0.00 36.32 3.58
1876 2014 3.541071 TTGATCTTGTCACACAATGCG 57.459 42.857 0.00 0.00 37.48 4.73
2038 2179 1.675219 GTGTTCGGTAGCCCTCCAA 59.325 57.895 0.00 0.00 0.00 3.53
2119 2262 1.202627 GGAGTGAGAAGCTGGCTATGG 60.203 57.143 0.00 0.00 0.00 2.74
2134 2281 3.881089 GGCTATGGGCGTAGTGTAAAATT 59.119 43.478 0.00 0.00 42.94 1.82
2178 2331 0.456221 TCGAGCTCCCAGAAATCGAC 59.544 55.000 8.47 0.00 37.48 4.20
2241 2394 1.079681 GTGAACATCGGGCGTACCA 60.080 57.895 0.00 0.00 40.22 3.25
2410 2569 2.203771 CCTATTCTCCTCCGCCGCT 61.204 63.158 0.00 0.00 0.00 5.52
2512 2807 1.523758 GTGGGCGTCTGATGTTCTTT 58.476 50.000 0.00 0.00 0.00 2.52
2707 3014 2.943978 GCAGCCGTGGTGGACTACT 61.944 63.158 5.46 0.00 42.00 2.57
2717 3024 0.317479 GTGGACTACTGAACACGCCT 59.683 55.000 0.00 0.00 0.00 5.52
2725 3032 1.202758 ACTGAACACGCCTTGAATCCA 60.203 47.619 0.00 0.00 0.00 3.41
2788 3098 3.816523 TGGAACAAGCCCTTACGTAAAAG 59.183 43.478 9.68 4.78 31.92 2.27
2878 3305 4.523943 CCAATTTGAGATGTCCTTCCACAA 59.476 41.667 0.00 0.00 0.00 3.33
2933 3360 0.179078 CAGAGGCTCTGCTGGACATC 60.179 60.000 29.86 0.00 37.72 3.06
2938 3365 1.085091 GCTCTGCTGGACATCACAAG 58.915 55.000 0.00 0.00 0.00 3.16
3311 3747 3.572255 GGCCAACTGAAAATACTTGTCCA 59.428 43.478 0.00 0.00 0.00 4.02
3467 4580 6.767524 TGAACAATCTTTGGTTACTGTTGT 57.232 33.333 0.00 0.00 34.12 3.32
3583 4696 5.169295 GCAAGTTTAGTTACTCGAGGATGT 58.831 41.667 18.41 0.47 0.00 3.06
3636 4749 3.068024 TGTTTGGATGGCAAGTTTCAGTC 59.932 43.478 0.00 0.00 0.00 3.51
3705 4818 0.601841 CGTCAGGGCGGTGTTACTTT 60.602 55.000 0.00 0.00 0.00 2.66
3731 4844 2.094258 CACACGTGTGGCACTTATCATC 59.906 50.000 35.65 0.26 42.10 2.92
3817 4932 4.551702 TGTTTGCTATCTTCTGTAGCCA 57.448 40.909 3.02 0.00 43.00 4.75
3939 5054 2.489329 TCTTCTTAATGTGCAGCTTGCC 59.511 45.455 5.82 0.00 44.23 4.52
4110 6696 6.013725 TGTCTTTCCTAGTTAAAGATGGCAGA 60.014 38.462 16.32 0.00 43.01 4.26
4216 6802 4.041049 CACAGAGATGCTCGTGTATCTTC 58.959 47.826 17.28 11.36 43.89 2.87
4344 6930 6.183361 ACAGAGATTGGAAGGTACTGTTTCTT 60.183 38.462 0.00 0.00 40.86 2.52
4388 6974 7.522073 CGGTATTTCAATATTTGACCTGGATGG 60.522 40.741 0.00 0.00 39.87 3.51
4505 7091 9.823647 CTATTTGATTTGAGTACCACTATGACT 57.176 33.333 0.00 0.00 0.00 3.41
4627 7213 4.502950 GCAGCAGGAGATAAGAACTAGCAT 60.503 45.833 0.00 0.00 0.00 3.79
4646 7232 5.319453 AGCATATGGTTGGTTGATCATAGG 58.681 41.667 0.40 0.00 0.00 2.57
4758 7345 4.669700 TGTTTAGTGACTAGGGCTGTCTA 58.330 43.478 0.00 0.00 35.63 2.59
4802 7389 7.489113 CCATTTATGCAGTTTATTGTCTTGGAC 59.511 37.037 0.00 0.00 0.00 4.02
4901 7488 3.672808 ACTCTGTTTGCATCTTCCTCTG 58.327 45.455 0.00 0.00 0.00 3.35
4915 7502 4.723789 TCTTCCTCTGAAATGGCTCCTATT 59.276 41.667 0.00 0.00 0.00 1.73
4926 7513 4.695217 TGGCTCCTATTTTTGCTAAACG 57.305 40.909 0.00 0.00 0.00 3.60
4945 7532 4.181309 ACGAGTGACTCATTTTCTCTCC 57.819 45.455 13.67 0.00 32.35 3.71
4947 7534 3.194542 CGAGTGACTCATTTTCTCTCCCT 59.805 47.826 13.67 0.00 32.35 4.20
4987 7574 6.183360 GGCAAGATAAAAGCACACAGTATCAT 60.183 38.462 0.00 0.00 0.00 2.45
5018 7605 9.064706 CATCAGATGCTGTAGGAGATTTTAATT 57.935 33.333 0.00 0.00 32.61 1.40
5104 7699 3.190849 CTGATGCCGCACAGGACG 61.191 66.667 12.51 0.00 45.00 4.79
5138 7733 3.802613 GCTGAAGAGCGAGAACAGA 57.197 52.632 0.00 0.00 34.87 3.41
5146 7741 1.219124 GCGAGAACAGATGGAGCCA 59.781 57.895 0.00 0.00 0.00 4.75
5302 7897 0.804544 CATGCCTGCTTGAAATGCCG 60.805 55.000 0.00 0.00 35.91 5.69
5310 7905 2.128853 CTTGAAATGCCGTGTGCCGT 62.129 55.000 0.00 0.00 40.16 5.68
5464 8060 6.294397 GGGCAATAGAAATGAAGCTCAATAGG 60.294 42.308 0.00 0.00 0.00 2.57
5476 8072 4.954875 AGCTCAATAGGAATGCTACTGTC 58.045 43.478 0.00 0.00 31.71 3.51
5516 8113 6.826231 TCGGCTTAAATAATGTTCTTGGATCA 59.174 34.615 0.00 0.00 0.00 2.92
5531 8128 9.167311 GTTCTTGGATCAGACTTGTATAATGTT 57.833 33.333 0.00 0.00 0.00 2.71
5572 8169 7.811713 GCTTGTGCTGATAGAGAAAAAGAAAAT 59.188 33.333 0.00 0.00 36.03 1.82
5628 8225 5.583854 CAGCATTTGTGAGTAGTCTGCTTAT 59.416 40.000 8.18 0.00 36.41 1.73
5633 8230 5.483685 TGTGAGTAGTCTGCTTATGGTTT 57.516 39.130 0.00 0.00 0.00 3.27
5634 8231 5.237815 TGTGAGTAGTCTGCTTATGGTTTG 58.762 41.667 0.00 0.00 0.00 2.93
5635 8232 5.011635 TGTGAGTAGTCTGCTTATGGTTTGA 59.988 40.000 0.00 0.00 0.00 2.69
5645 8242 8.072567 GTCTGCTTATGGTTTGATGATTGTATC 58.927 37.037 0.00 0.00 0.00 2.24
5655 8252 5.635417 TGATGATTGTATCGGTTTTTGCA 57.365 34.783 0.00 0.00 0.00 4.08
5664 8261 5.866633 TGTATCGGTTTTTGCATGATTTTCC 59.133 36.000 0.00 0.00 0.00 3.13
5665 8262 3.658709 TCGGTTTTTGCATGATTTTCCC 58.341 40.909 0.00 0.00 0.00 3.97
5716 8313 9.816354 TTAATTATTAATTGAGGAGGCAAAAGC 57.184 29.630 11.16 0.00 32.38 3.51
5728 8325 0.664466 GCAAAAGCTGCCTCCGTTTC 60.664 55.000 0.00 0.00 46.13 2.78
5729 8326 0.667993 CAAAAGCTGCCTCCGTTTCA 59.332 50.000 0.00 0.00 0.00 2.69
5852 8450 2.265467 AAACCATCGGGCTACGGCAT 62.265 55.000 1.81 0.00 44.45 4.40
5857 8455 2.172483 ATCGGGCTACGGCATGGATC 62.172 60.000 0.00 0.00 44.45 3.36
5867 8465 1.942657 CGGCATGGATCGACAAGAAAT 59.057 47.619 0.00 0.00 0.00 2.17
5919 8543 5.338365 CAGAGCTTCTGTTTATGCATTTCC 58.662 41.667 3.54 0.00 39.58 3.13
5953 8580 6.522946 AGTAGTATGCAGACGATACTCACTA 58.477 40.000 5.71 0.00 37.69 2.74
6141 8768 4.060667 CCGGGTCCCATGGGCTTT 62.061 66.667 27.41 0.00 34.68 3.51
6240 8867 2.651361 CGAGTCTTGACGGTGGCT 59.349 61.111 0.00 0.00 0.00 4.75
6266 8893 4.208686 GTCGCCGCCTAGGTCCAG 62.209 72.222 11.31 0.32 43.70 3.86
6269 8896 3.787001 GCCGCCTAGGTCCAGCTT 61.787 66.667 11.31 0.00 43.70 3.74
6270 8897 2.187946 CCGCCTAGGTCCAGCTTG 59.812 66.667 11.31 0.00 34.51 4.01
6271 8898 2.512515 CGCCTAGGTCCAGCTTGC 60.513 66.667 11.31 0.00 0.00 4.01
6272 8899 2.993853 GCCTAGGTCCAGCTTGCT 59.006 61.111 11.31 0.00 0.00 3.91
6273 8900 1.153269 GCCTAGGTCCAGCTTGCTC 60.153 63.158 11.31 0.00 0.00 4.26
6274 8901 1.903877 GCCTAGGTCCAGCTTGCTCA 61.904 60.000 11.31 0.00 0.00 4.26
6275 8902 0.835941 CCTAGGTCCAGCTTGCTCAT 59.164 55.000 0.00 0.00 0.00 2.90
6276 8903 1.202627 CCTAGGTCCAGCTTGCTCATC 60.203 57.143 0.00 0.00 0.00 2.92
6277 8904 1.761784 CTAGGTCCAGCTTGCTCATCT 59.238 52.381 0.00 0.00 0.00 2.90
6278 8905 0.990374 AGGTCCAGCTTGCTCATCTT 59.010 50.000 0.00 0.00 0.00 2.40
6279 8906 1.065564 AGGTCCAGCTTGCTCATCTTC 60.066 52.381 0.00 0.00 0.00 2.87
6280 8907 1.065564 GGTCCAGCTTGCTCATCTTCT 60.066 52.381 0.00 0.00 0.00 2.85
6281 8908 2.617532 GGTCCAGCTTGCTCATCTTCTT 60.618 50.000 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.497722 CTTTCCAACCGCTTCTCGC 59.502 57.895 0.00 0.00 36.73 5.03
3 4 1.912371 GCCTTTCCAACCGCTTCTCG 61.912 60.000 0.00 0.00 38.08 4.04
4 5 1.876664 GCCTTTCCAACCGCTTCTC 59.123 57.895 0.00 0.00 0.00 2.87
5 6 1.966451 CGCCTTTCCAACCGCTTCT 60.966 57.895 0.00 0.00 0.00 2.85
6 7 2.183858 GACGCCTTTCCAACCGCTTC 62.184 60.000 0.00 0.00 0.00 3.86
7 8 2.203294 ACGCCTTTCCAACCGCTT 60.203 55.556 0.00 0.00 0.00 4.68
8 9 2.668550 GACGCCTTTCCAACCGCT 60.669 61.111 0.00 0.00 0.00 5.52
9 10 2.966309 CTGACGCCTTTCCAACCGC 61.966 63.158 0.00 0.00 0.00 5.68
10 11 2.966309 GCTGACGCCTTTCCAACCG 61.966 63.158 0.00 0.00 0.00 4.44
11 12 2.954611 GCTGACGCCTTTCCAACC 59.045 61.111 0.00 0.00 0.00 3.77
12 13 2.556287 CGCTGACGCCTTTCCAAC 59.444 61.111 0.00 0.00 0.00 3.77
13 14 2.668185 TTCCGCTGACGCCTTTCCAA 62.668 55.000 0.00 0.00 38.22 3.53
14 15 3.171828 TTCCGCTGACGCCTTTCCA 62.172 57.895 0.00 0.00 38.22 3.53
15 16 2.358247 TTCCGCTGACGCCTTTCC 60.358 61.111 0.00 0.00 38.22 3.13
16 17 2.391389 CCTTCCGCTGACGCCTTTC 61.391 63.158 0.00 0.00 38.22 2.62
17 18 2.358737 CCTTCCGCTGACGCCTTT 60.359 61.111 0.00 0.00 38.22 3.11
22 23 3.777925 CAACGCCTTCCGCTGACG 61.778 66.667 0.00 0.00 41.76 4.35
23 24 3.423154 CCAACGCCTTCCGCTGAC 61.423 66.667 0.00 0.00 41.76 3.51
28 29 3.124921 ATTCGCCAACGCCTTCCG 61.125 61.111 0.00 0.00 44.21 4.30
29 30 2.485122 CATTCGCCAACGCCTTCC 59.515 61.111 0.00 0.00 39.84 3.46
30 31 2.202479 GCATTCGCCAACGCCTTC 60.202 61.111 0.00 0.00 39.84 3.46
31 32 4.101790 CGCATTCGCCAACGCCTT 62.102 61.111 0.00 0.00 39.84 4.35
41 42 2.082437 GATGTCGGACTGCGCATTCG 62.082 60.000 19.86 18.41 39.07 3.34
42 43 1.638467 GATGTCGGACTGCGCATTC 59.362 57.895 18.62 18.62 0.00 2.67
43 44 2.167219 CGATGTCGGACTGCGCATT 61.167 57.895 12.24 4.70 35.37 3.56
44 45 2.583319 CGATGTCGGACTGCGCAT 60.583 61.111 12.24 0.17 35.37 4.73
45 46 3.567478 AACGATGTCGGACTGCGCA 62.567 57.895 10.98 10.98 44.95 6.09
46 47 2.809601 AACGATGTCGGACTGCGC 60.810 61.111 18.22 0.00 44.95 6.09
47 48 3.071459 GCAACGATGTCGGACTGCG 62.071 63.158 17.20 17.20 44.95 5.18
48 49 1.959899 CTGCAACGATGTCGGACTGC 61.960 60.000 9.88 10.61 44.95 4.40
49 50 1.959899 GCTGCAACGATGTCGGACTG 61.960 60.000 9.88 0.00 44.95 3.51
50 51 1.738099 GCTGCAACGATGTCGGACT 60.738 57.895 9.88 0.00 44.95 3.85
51 52 1.959899 CTGCTGCAACGATGTCGGAC 61.960 60.000 3.02 0.00 44.95 4.79
52 53 1.737735 CTGCTGCAACGATGTCGGA 60.738 57.895 3.02 0.00 44.95 4.55
53 54 2.743752 CCTGCTGCAACGATGTCGG 61.744 63.158 3.02 0.00 44.95 4.79
54 55 2.029288 ACCTGCTGCAACGATGTCG 61.029 57.895 3.02 0.11 46.33 4.35
55 56 1.499056 CACCTGCTGCAACGATGTC 59.501 57.895 3.02 0.00 0.00 3.06
56 57 1.968017 CCACCTGCTGCAACGATGT 60.968 57.895 3.02 0.00 0.00 3.06
57 58 2.693762 CCCACCTGCTGCAACGATG 61.694 63.158 3.02 0.00 0.00 3.84
58 59 2.360350 CCCACCTGCTGCAACGAT 60.360 61.111 3.02 0.00 0.00 3.73
61 62 3.677648 CTGCCCACCTGCTGCAAC 61.678 66.667 3.02 0.00 34.06 4.17
62 63 4.208403 ACTGCCCACCTGCTGCAA 62.208 61.111 3.02 0.00 34.06 4.08
63 64 4.648626 GACTGCCCACCTGCTGCA 62.649 66.667 0.88 0.88 33.92 4.41
65 66 3.832237 AACGACTGCCCACCTGCTG 62.832 63.158 0.00 0.00 36.39 4.41
66 67 3.537206 GAACGACTGCCCACCTGCT 62.537 63.158 0.00 0.00 0.00 4.24
67 68 3.050275 GAACGACTGCCCACCTGC 61.050 66.667 0.00 0.00 0.00 4.85
68 69 0.951040 GAAGAACGACTGCCCACCTG 60.951 60.000 0.00 0.00 0.00 4.00
69 70 1.371558 GAAGAACGACTGCCCACCT 59.628 57.895 0.00 0.00 0.00 4.00
70 71 1.070786 TGAAGAACGACTGCCCACC 59.929 57.895 0.00 0.00 0.00 4.61
71 72 2.235546 GTGAAGAACGACTGCCCAC 58.764 57.895 0.00 0.00 0.00 4.61
72 73 4.771127 GTGAAGAACGACTGCCCA 57.229 55.556 0.00 0.00 0.00 5.36
81 82 0.982673 CATCGTCCGACGTGAAGAAC 59.017 55.000 19.89 0.00 43.14 3.01
82 83 0.876399 TCATCGTCCGACGTGAAGAA 59.124 50.000 19.89 0.47 43.14 2.52
83 84 1.063616 GATCATCGTCCGACGTGAAGA 59.936 52.381 19.89 13.45 43.14 2.87
84 85 1.467875 GATCATCGTCCGACGTGAAG 58.532 55.000 19.89 9.04 43.14 3.02
85 86 0.247934 CGATCATCGTCCGACGTGAA 60.248 55.000 19.89 7.46 43.14 3.18
86 87 1.350665 CGATCATCGTCCGACGTGA 59.649 57.895 19.89 20.35 43.14 4.35
87 88 1.654440 CCGATCATCGTCCGACGTG 60.654 63.158 19.89 16.40 43.14 4.49
88 89 2.110967 ACCGATCATCGTCCGACGT 61.111 57.895 19.89 5.60 43.14 4.34
89 90 1.654440 CACCGATCATCGTCCGACG 60.654 63.158 14.94 14.94 44.19 5.12
90 91 1.299165 CCACCGATCATCGTCCGAC 60.299 63.158 6.25 0.00 38.40 4.79
91 92 3.116463 CCACCGATCATCGTCCGA 58.884 61.111 6.25 0.00 38.40 4.55
92 93 2.658593 GCCACCGATCATCGTCCG 60.659 66.667 6.25 0.00 38.40 4.79
93 94 1.592669 CAGCCACCGATCATCGTCC 60.593 63.158 6.25 0.00 38.40 4.79
94 95 1.592669 CCAGCCACCGATCATCGTC 60.593 63.158 6.25 0.00 38.40 4.20
95 96 2.058001 TCCAGCCACCGATCATCGT 61.058 57.895 6.25 0.00 38.40 3.73
96 97 1.592669 GTCCAGCCACCGATCATCG 60.593 63.158 0.00 0.00 40.07 3.84
97 98 0.107456 ATGTCCAGCCACCGATCATC 59.893 55.000 0.00 0.00 0.00 2.92
98 99 0.107456 GATGTCCAGCCACCGATCAT 59.893 55.000 0.00 0.00 0.00 2.45
99 100 0.977627 AGATGTCCAGCCACCGATCA 60.978 55.000 0.00 0.00 0.00 2.92
100 101 0.531532 CAGATGTCCAGCCACCGATC 60.532 60.000 0.00 0.00 0.00 3.69
101 102 1.524002 CAGATGTCCAGCCACCGAT 59.476 57.895 0.00 0.00 0.00 4.18
102 103 2.659063 CCAGATGTCCAGCCACCGA 61.659 63.158 0.00 0.00 0.00 4.69
103 104 2.124983 CCAGATGTCCAGCCACCG 60.125 66.667 0.00 0.00 0.00 4.94
104 105 1.626356 TAGCCAGATGTCCAGCCACC 61.626 60.000 0.00 0.00 0.00 4.61
105 106 0.179062 CTAGCCAGATGTCCAGCCAC 60.179 60.000 0.00 0.00 0.00 5.01
106 107 0.325577 TCTAGCCAGATGTCCAGCCA 60.326 55.000 0.00 0.00 0.00 4.75
107 108 0.105778 GTCTAGCCAGATGTCCAGCC 59.894 60.000 0.00 0.00 32.09 4.85
108 109 0.826715 TGTCTAGCCAGATGTCCAGC 59.173 55.000 0.00 0.00 32.09 4.85
109 110 1.137872 GGTGTCTAGCCAGATGTCCAG 59.862 57.143 0.00 0.00 32.09 3.86
110 111 1.195115 GGTGTCTAGCCAGATGTCCA 58.805 55.000 0.00 0.00 32.09 4.02
111 112 1.410882 GAGGTGTCTAGCCAGATGTCC 59.589 57.143 0.00 0.00 32.09 4.02
112 113 1.066303 CGAGGTGTCTAGCCAGATGTC 59.934 57.143 0.00 0.00 32.09 3.06
113 114 1.107114 CGAGGTGTCTAGCCAGATGT 58.893 55.000 0.00 0.00 32.09 3.06
114 115 0.387202 CCGAGGTGTCTAGCCAGATG 59.613 60.000 0.00 0.00 32.09 2.90
115 116 0.259065 TCCGAGGTGTCTAGCCAGAT 59.741 55.000 0.00 0.00 32.09 2.90
116 117 0.680280 GTCCGAGGTGTCTAGCCAGA 60.680 60.000 0.00 0.00 0.00 3.86
117 118 1.810532 GTCCGAGGTGTCTAGCCAG 59.189 63.158 0.00 0.00 0.00 4.85
118 119 2.044555 CGTCCGAGGTGTCTAGCCA 61.045 63.158 0.00 0.00 0.00 4.75
119 120 1.748122 TCGTCCGAGGTGTCTAGCC 60.748 63.158 0.00 0.00 0.00 3.93
120 121 1.303799 TGTCGTCCGAGGTGTCTAGC 61.304 60.000 0.00 0.00 0.00 3.42
121 122 0.447011 GTGTCGTCCGAGGTGTCTAG 59.553 60.000 0.00 0.00 0.00 2.43
122 123 0.957395 GGTGTCGTCCGAGGTGTCTA 60.957 60.000 0.00 0.00 0.00 2.59
123 124 2.266627 GGTGTCGTCCGAGGTGTCT 61.267 63.158 0.00 0.00 0.00 3.41
124 125 2.257676 GGTGTCGTCCGAGGTGTC 59.742 66.667 0.00 0.00 0.00 3.67
133 134 3.823330 ATCCTCGGCGGTGTCGTC 61.823 66.667 7.21 0.00 38.89 4.20
134 135 4.129737 CATCCTCGGCGGTGTCGT 62.130 66.667 7.21 0.00 38.89 4.34
135 136 1.792118 TATCATCCTCGGCGGTGTCG 61.792 60.000 7.21 0.00 39.81 4.35
136 137 0.039074 CTATCATCCTCGGCGGTGTC 60.039 60.000 7.21 0.00 0.00 3.67
137 138 2.041976 CTATCATCCTCGGCGGTGT 58.958 57.895 7.21 0.00 0.00 4.16
138 139 1.373497 GCTATCATCCTCGGCGGTG 60.373 63.158 7.21 0.00 0.00 4.94
139 140 2.920645 CGCTATCATCCTCGGCGGT 61.921 63.158 7.21 0.00 41.77 5.68
140 141 1.938657 ATCGCTATCATCCTCGGCGG 61.939 60.000 7.21 0.00 44.88 6.13
141 142 0.799917 CATCGCTATCATCCTCGGCG 60.800 60.000 0.00 0.00 45.93 6.46
142 143 0.459237 CCATCGCTATCATCCTCGGC 60.459 60.000 0.00 0.00 0.00 5.54
143 144 0.891373 ACCATCGCTATCATCCTCGG 59.109 55.000 0.00 0.00 0.00 4.63
144 145 1.541588 TCACCATCGCTATCATCCTCG 59.458 52.381 0.00 0.00 0.00 4.63
145 146 3.194329 TCATCACCATCGCTATCATCCTC 59.806 47.826 0.00 0.00 0.00 3.71
146 147 3.168292 TCATCACCATCGCTATCATCCT 58.832 45.455 0.00 0.00 0.00 3.24
147 148 3.599730 TCATCACCATCGCTATCATCC 57.400 47.619 0.00 0.00 0.00 3.51
148 149 4.752146 TCATCATCACCATCGCTATCATC 58.248 43.478 0.00 0.00 0.00 2.92
149 150 4.813750 TCATCATCACCATCGCTATCAT 57.186 40.909 0.00 0.00 0.00 2.45
150 151 4.813750 ATCATCATCACCATCGCTATCA 57.186 40.909 0.00 0.00 0.00 2.15
151 152 4.744137 GCTATCATCATCACCATCGCTATC 59.256 45.833 0.00 0.00 0.00 2.08
152 153 4.691175 GCTATCATCATCACCATCGCTAT 58.309 43.478 0.00 0.00 0.00 2.97
153 154 3.428045 CGCTATCATCATCACCATCGCTA 60.428 47.826 0.00 0.00 0.00 4.26
154 155 2.673326 CGCTATCATCATCACCATCGCT 60.673 50.000 0.00 0.00 0.00 4.93
155 156 1.657594 CGCTATCATCATCACCATCGC 59.342 52.381 0.00 0.00 0.00 4.58
156 157 2.919859 GTCGCTATCATCATCACCATCG 59.080 50.000 0.00 0.00 0.00 3.84
157 158 4.185467 AGTCGCTATCATCATCACCATC 57.815 45.455 0.00 0.00 0.00 3.51
158 159 4.613925 AAGTCGCTATCATCATCACCAT 57.386 40.909 0.00 0.00 0.00 3.55
159 160 4.827284 TCTAAGTCGCTATCATCATCACCA 59.173 41.667 0.00 0.00 0.00 4.17
160 161 5.048364 ACTCTAAGTCGCTATCATCATCACC 60.048 44.000 0.00 0.00 0.00 4.02
161 162 6.007936 ACTCTAAGTCGCTATCATCATCAC 57.992 41.667 0.00 0.00 0.00 3.06
162 163 6.937465 ACTACTCTAAGTCGCTATCATCATCA 59.063 38.462 0.00 0.00 0.00 3.07
163 164 7.372451 ACTACTCTAAGTCGCTATCATCATC 57.628 40.000 0.00 0.00 0.00 2.92
164 165 7.753309 AACTACTCTAAGTCGCTATCATCAT 57.247 36.000 0.00 0.00 0.00 2.45
165 166 7.499563 AGAAACTACTCTAAGTCGCTATCATCA 59.500 37.037 0.00 0.00 0.00 3.07
166 167 7.867752 AGAAACTACTCTAAGTCGCTATCATC 58.132 38.462 0.00 0.00 0.00 2.92
167 168 7.811117 AGAAACTACTCTAAGTCGCTATCAT 57.189 36.000 0.00 0.00 0.00 2.45
168 169 8.905660 ATAGAAACTACTCTAAGTCGCTATCA 57.094 34.615 0.00 0.00 31.76 2.15
169 170 9.211485 AGATAGAAACTACTCTAAGTCGCTATC 57.789 37.037 0.00 0.00 39.64 2.08
171 172 9.695526 CTAGATAGAAACTACTCTAAGTCGCTA 57.304 37.037 0.00 0.00 31.76 4.26
172 173 8.206189 ACTAGATAGAAACTACTCTAAGTCGCT 58.794 37.037 0.00 0.00 31.76 4.93
173 174 8.369218 ACTAGATAGAAACTACTCTAAGTCGC 57.631 38.462 0.00 0.00 31.76 5.19
177 178 9.724839 GCACAACTAGATAGAAACTACTCTAAG 57.275 37.037 0.00 0.00 31.76 2.18
178 179 8.684520 GGCACAACTAGATAGAAACTACTCTAA 58.315 37.037 0.00 0.00 31.76 2.10
179 180 7.012138 CGGCACAACTAGATAGAAACTACTCTA 59.988 40.741 0.00 0.00 32.53 2.43
180 181 6.183360 CGGCACAACTAGATAGAAACTACTCT 60.183 42.308 0.00 0.00 0.00 3.24
181 182 5.972382 CGGCACAACTAGATAGAAACTACTC 59.028 44.000 0.00 0.00 0.00 2.59
182 183 5.418209 ACGGCACAACTAGATAGAAACTACT 59.582 40.000 0.00 0.00 0.00 2.57
183 184 5.648572 ACGGCACAACTAGATAGAAACTAC 58.351 41.667 0.00 0.00 0.00 2.73
184 185 5.909621 ACGGCACAACTAGATAGAAACTA 57.090 39.130 0.00 0.00 0.00 2.24
185 186 4.803098 ACGGCACAACTAGATAGAAACT 57.197 40.909 0.00 0.00 0.00 2.66
186 187 5.648572 ACTACGGCACAACTAGATAGAAAC 58.351 41.667 0.00 0.00 0.00 2.78
187 188 5.909621 ACTACGGCACAACTAGATAGAAA 57.090 39.130 0.00 0.00 0.00 2.52
188 189 5.909621 AACTACGGCACAACTAGATAGAA 57.090 39.130 0.00 0.00 0.00 2.10
189 190 5.909621 AAACTACGGCACAACTAGATAGA 57.090 39.130 0.00 0.00 0.00 1.98
190 191 7.649973 AGATAAACTACGGCACAACTAGATAG 58.350 38.462 0.00 0.00 0.00 2.08
191 192 7.578310 AGATAAACTACGGCACAACTAGATA 57.422 36.000 0.00 0.00 0.00 1.98
192 193 6.466885 AGATAAACTACGGCACAACTAGAT 57.533 37.500 0.00 0.00 0.00 1.98
193 194 5.909621 AGATAAACTACGGCACAACTAGA 57.090 39.130 0.00 0.00 0.00 2.43
194 195 6.144080 GCATAGATAAACTACGGCACAACTAG 59.856 42.308 0.00 0.00 35.87 2.57
195 196 5.981315 GCATAGATAAACTACGGCACAACTA 59.019 40.000 0.00 0.00 35.87 2.24
196 197 4.809426 GCATAGATAAACTACGGCACAACT 59.191 41.667 0.00 0.00 35.87 3.16
197 198 4.809426 AGCATAGATAAACTACGGCACAAC 59.191 41.667 0.00 0.00 37.27 3.32
198 199 5.018539 AGCATAGATAAACTACGGCACAA 57.981 39.130 0.00 0.00 37.27 3.33
199 200 4.665833 AGCATAGATAAACTACGGCACA 57.334 40.909 0.00 0.00 37.27 4.57
200 201 5.332355 CGAAAGCATAGATAAACTACGGCAC 60.332 44.000 0.00 0.00 37.27 5.01
201 202 4.743151 CGAAAGCATAGATAAACTACGGCA 59.257 41.667 0.00 0.00 37.27 5.69
202 203 4.980434 TCGAAAGCATAGATAAACTACGGC 59.020 41.667 0.00 0.00 35.98 5.68
203 204 6.696148 AGTTCGAAAGCATAGATAAACTACGG 59.304 38.462 0.00 0.00 33.62 4.02
204 205 7.681125 AGTTCGAAAGCATAGATAAACTACG 57.319 36.000 0.00 0.00 33.62 3.51
213 214 9.727859 ACTAGATAGATAGTTCGAAAGCATAGA 57.272 33.333 0.00 0.00 31.89 1.98
216 217 7.596995 GCAACTAGATAGATAGTTCGAAAGCAT 59.403 37.037 0.00 0.00 42.68 3.79
217 218 6.918569 GCAACTAGATAGATAGTTCGAAAGCA 59.081 38.462 0.00 0.00 42.68 3.91
218 219 6.918569 TGCAACTAGATAGATAGTTCGAAAGC 59.081 38.462 0.00 0.00 42.68 3.51
219 220 7.380065 GGTGCAACTAGATAGATAGTTCGAAAG 59.620 40.741 0.00 0.00 42.68 2.62
220 221 7.201145 GGTGCAACTAGATAGATAGTTCGAAA 58.799 38.462 0.00 0.00 42.68 3.46
221 222 6.512903 CGGTGCAACTAGATAGATAGTTCGAA 60.513 42.308 0.00 0.00 42.68 3.71
222 223 5.049612 CGGTGCAACTAGATAGATAGTTCGA 60.050 44.000 0.00 0.00 42.68 3.71
223 224 5.049612 TCGGTGCAACTAGATAGATAGTTCG 60.050 44.000 0.00 0.00 42.68 3.95
224 225 6.315091 TCGGTGCAACTAGATAGATAGTTC 57.685 41.667 0.00 0.00 42.68 3.01
225 226 6.265649 ACATCGGTGCAACTAGATAGATAGTT 59.734 38.462 0.00 0.00 44.84 2.24
226 227 5.770663 ACATCGGTGCAACTAGATAGATAGT 59.229 40.000 0.00 0.00 37.61 2.12
227 228 6.260870 ACATCGGTGCAACTAGATAGATAG 57.739 41.667 0.00 0.00 33.80 2.08
228 229 7.754851 TTACATCGGTGCAACTAGATAGATA 57.245 36.000 0.00 0.00 33.80 1.98
229 230 6.650427 TTACATCGGTGCAACTAGATAGAT 57.350 37.500 0.00 0.00 33.80 1.98
230 231 6.459670 TTTACATCGGTGCAACTAGATAGA 57.540 37.500 0.00 0.00 33.80 1.98
231 232 7.715265 ATTTTACATCGGTGCAACTAGATAG 57.285 36.000 0.00 0.00 33.80 2.08
232 233 7.654520 GGTATTTTACATCGGTGCAACTAGATA 59.345 37.037 0.00 0.00 33.80 1.98
233 234 6.482308 GGTATTTTACATCGGTGCAACTAGAT 59.518 38.462 0.00 0.00 36.74 1.98
234 235 5.813672 GGTATTTTACATCGGTGCAACTAGA 59.186 40.000 0.00 0.00 36.74 2.43
235 236 5.815740 AGGTATTTTACATCGGTGCAACTAG 59.184 40.000 0.00 0.00 36.74 2.57
236 237 5.736813 AGGTATTTTACATCGGTGCAACTA 58.263 37.500 0.00 0.00 36.74 2.24
237 238 4.585879 AGGTATTTTACATCGGTGCAACT 58.414 39.130 0.00 0.00 36.74 3.16
238 239 4.957759 AGGTATTTTACATCGGTGCAAC 57.042 40.909 0.00 0.00 0.00 4.17
239 240 5.241949 ACAAAGGTATTTTACATCGGTGCAA 59.758 36.000 0.00 0.00 0.00 4.08
240 241 4.762765 ACAAAGGTATTTTACATCGGTGCA 59.237 37.500 0.00 0.00 0.00 4.57
241 242 5.305139 ACAAAGGTATTTTACATCGGTGC 57.695 39.130 0.00 0.00 0.00 5.01
242 243 7.010738 ACGATACAAAGGTATTTTACATCGGTG 59.989 37.037 0.00 0.00 41.36 4.94
243 244 7.043565 ACGATACAAAGGTATTTTACATCGGT 58.956 34.615 14.21 0.00 41.36 4.69
244 245 7.473027 ACGATACAAAGGTATTTTACATCGG 57.527 36.000 14.21 0.00 41.36 4.18
245 246 9.763465 AAAACGATACAAAGGTATTTTACATCG 57.237 29.630 0.00 0.00 40.28 3.84
324 325 1.201758 GCGCGCGCACAAAATATTTTT 60.202 42.857 46.11 0.97 41.49 1.94
325 326 0.365186 GCGCGCGCACAAAATATTTT 59.635 45.000 46.11 7.64 41.49 1.82
326 327 1.987656 GCGCGCGCACAAAATATTT 59.012 47.368 46.11 0.00 41.49 1.40
327 328 3.674229 GCGCGCGCACAAAATATT 58.326 50.000 46.11 0.00 41.49 1.28
341 342 3.307262 CTAAAATGCAGCGCGCGC 61.307 61.111 45.10 45.10 46.97 6.86
342 343 3.307262 GCTAAAATGCAGCGCGCG 61.307 61.111 28.44 28.44 46.97 6.86
347 348 2.951227 GCCGCGCTAAAATGCAGC 60.951 61.111 5.56 0.00 35.61 5.25
348 349 1.584483 CAGCCGCGCTAAAATGCAG 60.584 57.895 5.56 0.00 36.40 4.41
349 350 2.484662 CAGCCGCGCTAAAATGCA 59.515 55.556 5.56 0.00 36.40 3.96
350 351 2.951227 GCAGCCGCGCTAAAATGC 60.951 61.111 5.56 4.97 36.40 3.56
351 352 1.584483 CAGCAGCCGCGCTAAAATG 60.584 57.895 5.56 0.00 45.49 2.32
352 353 2.764314 CCAGCAGCCGCGCTAAAAT 61.764 57.895 5.56 0.00 45.49 1.82
353 354 3.430862 CCAGCAGCCGCGCTAAAA 61.431 61.111 5.56 0.00 45.49 1.52
354 355 4.386951 TCCAGCAGCCGCGCTAAA 62.387 61.111 5.56 0.00 45.49 1.85
355 356 4.819761 CTCCAGCAGCCGCGCTAA 62.820 66.667 5.56 1.87 45.49 3.09
383 384 0.793104 AAAAATCTGTTAGCGCGCGC 60.793 50.000 45.10 45.10 42.33 6.86
384 385 3.290098 AAAAATCTGTTAGCGCGCG 57.710 47.368 28.44 28.44 0.00 6.86
399 400 1.589320 CTATAGCGCCGCGTGTAAAAA 59.411 47.619 15.34 0.00 0.00 1.94
400 401 1.202203 CTATAGCGCCGCGTGTAAAA 58.798 50.000 15.34 0.00 0.00 1.52
401 402 1.210545 GCTATAGCGCCGCGTGTAAA 61.211 55.000 15.34 0.00 0.00 2.01
402 403 1.659335 GCTATAGCGCCGCGTGTAA 60.659 57.895 15.34 0.00 0.00 2.41
403 404 2.050714 GCTATAGCGCCGCGTGTA 60.051 61.111 15.34 7.03 0.00 2.90
413 414 2.598632 CCAACAGCCGCGCTATAGC 61.599 63.158 15.09 15.09 36.40 2.97
414 415 0.941463 CTCCAACAGCCGCGCTATAG 60.941 60.000 5.56 0.00 36.40 1.31
415 416 1.067416 CTCCAACAGCCGCGCTATA 59.933 57.895 5.56 0.00 36.40 1.31
416 417 2.032860 ATCTCCAACAGCCGCGCTAT 62.033 55.000 5.56 0.00 36.40 2.97
417 418 2.721167 ATCTCCAACAGCCGCGCTA 61.721 57.895 5.56 0.00 36.40 4.26
418 419 4.087892 ATCTCCAACAGCCGCGCT 62.088 61.111 5.56 0.00 40.77 5.92
419 420 3.869272 CATCTCCAACAGCCGCGC 61.869 66.667 0.00 0.00 0.00 6.86
420 421 3.869272 GCATCTCCAACAGCCGCG 61.869 66.667 0.00 0.00 0.00 6.46
421 422 2.437359 AGCATCTCCAACAGCCGC 60.437 61.111 0.00 0.00 0.00 6.53
422 423 3.805267 GAGCATCTCCAACAGCCG 58.195 61.111 0.00 0.00 0.00 5.52
433 434 7.559590 ACCAAAGTTCATACATAAGAGCATC 57.440 36.000 0.00 0.00 0.00 3.91
434 435 7.224753 CGTACCAAAGTTCATACATAAGAGCAT 59.775 37.037 0.00 0.00 0.00 3.79
435 436 6.533723 CGTACCAAAGTTCATACATAAGAGCA 59.466 38.462 0.00 0.00 0.00 4.26
436 437 6.534079 ACGTACCAAAGTTCATACATAAGAGC 59.466 38.462 0.00 0.00 0.00 4.09
437 438 9.017669 GTACGTACCAAAGTTCATACATAAGAG 57.982 37.037 15.00 0.00 0.00 2.85
438 439 8.742777 AGTACGTACCAAAGTTCATACATAAGA 58.257 33.333 21.80 0.00 0.00 2.10
439 440 8.922058 AGTACGTACCAAAGTTCATACATAAG 57.078 34.615 21.80 0.00 0.00 1.73
459 460 5.274881 ACCGAGCTCGTATATTTAGTACG 57.725 43.478 32.41 15.70 44.56 3.67
474 475 1.967066 CAGATCCCTTCATACCGAGCT 59.033 52.381 0.00 0.00 0.00 4.09
487 488 0.463474 GCTTGGTCAGAGCAGATCCC 60.463 60.000 1.86 0.00 39.89 3.85
507 508 4.238514 CGGTATTTTGAATTTTGCGGGAA 58.761 39.130 0.00 0.00 0.00 3.97
546 547 1.299541 GGATCATGCAATCGGTCGTT 58.700 50.000 0.00 0.00 0.00 3.85
560 561 4.598022 TGTATGAGCATTTTGGTGGATCA 58.402 39.130 0.00 0.00 0.00 2.92
624 627 0.738762 CAGATGATGATAGGCGCCGG 60.739 60.000 23.20 0.00 0.00 6.13
643 646 3.748298 CGGAAGATCTTTTTCTTTCGGC 58.252 45.455 9.87 0.00 46.41 5.54
646 649 4.216472 AGGTGCGGAAGATCTTTTTCTTTC 59.784 41.667 9.87 0.00 36.10 2.62
730 737 2.126110 CCCGCCGGTTGATTTTGC 60.126 61.111 1.90 0.00 0.00 3.68
731 738 2.272447 ACCCCGCCGGTTGATTTTG 61.272 57.895 1.90 0.00 45.36 2.44
732 739 2.116556 ACCCCGCCGGTTGATTTT 59.883 55.556 1.90 0.00 45.36 1.82
777 800 1.721133 CGGTGCGCACGAAGTTTTC 60.721 57.895 32.35 15.86 41.61 2.29
846 869 2.909662 GGAGATGGGGAGGGAATAAGAG 59.090 54.545 0.00 0.00 0.00 2.85
862 885 4.718940 ATTTCGCCGAAAATTTGGAGAT 57.281 36.364 17.02 0.00 39.78 2.75
901 924 4.426313 GAAGGGAAGGGCGGGTGG 62.426 72.222 0.00 0.00 0.00 4.61
905 928 3.339093 AAGGGAAGGGAAGGGCGG 61.339 66.667 0.00 0.00 0.00 6.13
906 929 2.272471 GAAGGGAAGGGAAGGGCG 59.728 66.667 0.00 0.00 0.00 6.13
907 930 2.684104 GGAAGGGAAGGGAAGGGC 59.316 66.667 0.00 0.00 0.00 5.19
908 931 2.317378 GGGGAAGGGAAGGGAAGGG 61.317 68.421 0.00 0.00 0.00 3.95
910 933 2.680370 CGGGGGAAGGGAAGGGAAG 61.680 68.421 0.00 0.00 0.00 3.46
911 934 2.612746 CGGGGGAAGGGAAGGGAA 60.613 66.667 0.00 0.00 0.00 3.97
912 935 3.937372 GACGGGGGAAGGGAAGGGA 62.937 68.421 0.00 0.00 0.00 4.20
913 936 3.408853 GACGGGGGAAGGGAAGGG 61.409 72.222 0.00 0.00 0.00 3.95
914 937 3.782443 CGACGGGGGAAGGGAAGG 61.782 72.222 0.00 0.00 0.00 3.46
915 938 4.468689 GCGACGGGGGAAGGGAAG 62.469 72.222 0.00 0.00 0.00 3.46
952 976 2.438021 CAAATCGATCCCCAACCCTAGA 59.562 50.000 0.00 0.00 0.00 2.43
961 985 1.423794 TAGGCCCCAAATCGATCCCC 61.424 60.000 0.00 0.00 0.00 4.81
1175 1201 3.505184 CCCCGAAATGGAACCGCG 61.505 66.667 0.00 0.00 42.00 6.46
1205 1231 3.247648 ACACGAAAACAACTCAGAATCGG 59.752 43.478 0.00 0.00 33.45 4.18
1223 1249 3.010692 CACAAACACGCGCACACG 61.011 61.111 5.73 0.00 44.07 4.49
1355 1488 2.100631 CGCGGGTTGTAAGAGCAGG 61.101 63.158 0.00 0.00 0.00 4.85
1356 1489 0.460284 ATCGCGGGTTGTAAGAGCAG 60.460 55.000 6.13 0.00 0.00 4.24
1364 1497 3.086282 AGGAAAAATAATCGCGGGTTGT 58.914 40.909 6.13 0.00 0.00 3.32
1366 1499 3.617284 AGAGGAAAAATAATCGCGGGTT 58.383 40.909 6.13 4.41 0.00 4.11
1374 1507 7.059156 CACCCATCTGAGAGAGGAAAAATAAT 58.941 38.462 7.48 0.00 0.00 1.28
1377 1510 4.537688 TCACCCATCTGAGAGAGGAAAAAT 59.462 41.667 7.48 0.00 0.00 1.82
1444 1577 1.005569 ACAGACTGATAGACCCGGTCA 59.994 52.381 19.95 6.28 41.22 4.02
1600 1737 5.198965 GTGTACTTCTAGTGATGTCCCCTA 58.801 45.833 0.00 0.00 33.46 3.53
1626 1763 5.163723 ACACAAGTTCATATCATTTGCTCGG 60.164 40.000 0.00 0.00 0.00 4.63
1664 1801 1.854743 CGCACATTCTATGAGTCACGG 59.145 52.381 0.00 0.00 0.00 4.94
1667 1804 1.206849 TGCCGCACATTCTATGAGTCA 59.793 47.619 0.00 0.00 0.00 3.41
1668 1805 1.939974 TGCCGCACATTCTATGAGTC 58.060 50.000 0.00 0.00 0.00 3.36
1669 1806 2.158914 TCATGCCGCACATTCTATGAGT 60.159 45.455 0.00 0.00 36.64 3.41
1672 1809 2.809696 TGATCATGCCGCACATTCTATG 59.190 45.455 0.00 0.00 36.64 2.23
1673 1810 3.130280 TGATCATGCCGCACATTCTAT 57.870 42.857 0.00 0.00 36.64 1.98
1684 1821 6.624352 TGAAAGTAAGCTTATGATCATGCC 57.376 37.500 18.72 6.25 33.95 4.40
1708 1845 5.010314 ACAAGGTAGAACTACGAACATGACA 59.990 40.000 0.00 0.00 36.94 3.58
1709 1846 5.467705 ACAAGGTAGAACTACGAACATGAC 58.532 41.667 0.00 0.00 36.94 3.06
1768 1905 3.181479 GCTCCATTCTACCGTATGACACA 60.181 47.826 0.00 0.00 0.00 3.72
1778 1915 3.961408 TCCTAAGTCAGCTCCATTCTACC 59.039 47.826 0.00 0.00 0.00 3.18
1782 1919 5.537188 CATACTCCTAAGTCAGCTCCATTC 58.463 45.833 0.00 0.00 36.92 2.67
1799 1937 7.064371 CCTGCAGTCTATTTATGATGCATACTC 59.936 40.741 13.81 0.00 42.24 2.59
1869 2007 0.030638 GACAAACAGCCACGCATTGT 59.969 50.000 0.00 0.00 35.82 2.71
1876 2014 1.024271 TCTTGCAGACAAACAGCCAC 58.976 50.000 0.00 0.00 34.74 5.01
1928 2067 2.031516 CAGTGAGCTCAAGGCACGG 61.032 63.158 20.19 2.88 44.79 4.94
1930 2069 1.233285 CCACAGTGAGCTCAAGGCAC 61.233 60.000 20.19 6.14 44.79 5.01
2001 2140 1.275573 ACGCCCTCAGTCTAACCTTTC 59.724 52.381 0.00 0.00 0.00 2.62
2002 2141 1.002087 CACGCCCTCAGTCTAACCTTT 59.998 52.381 0.00 0.00 0.00 3.11
2014 2155 2.508663 GCTACCGAACACGCCCTC 60.509 66.667 0.00 0.00 0.00 4.30
2038 2179 3.309296 TGGAGTTGAGGAGTTGAGAAGT 58.691 45.455 0.00 0.00 0.00 3.01
2119 2262 1.202098 CCGCCAATTTTACACTACGCC 60.202 52.381 0.00 0.00 0.00 5.68
2134 2281 2.915659 AACTCCACGACTCCGCCA 60.916 61.111 0.00 0.00 39.95 5.69
2178 2331 3.577649 TTCAGTCAAACTCTAGCTCCG 57.422 47.619 0.00 0.00 0.00 4.63
2241 2394 0.811616 GTGCGGGATGAGCTCGAATT 60.812 55.000 9.64 0.00 45.56 2.17
2332 2489 1.631071 TATGGTCAATGGGCTCGGCA 61.631 55.000 0.00 0.00 0.00 5.69
2410 2569 1.153449 CTAGCGGATTGGAACGGCA 60.153 57.895 0.00 0.00 36.34 5.69
2465 2628 1.090625 ATCGAGGTCGTCAGGAGTCG 61.091 60.000 0.00 0.00 40.80 4.18
2499 2794 4.023707 CCTGGTCAACAAAGAACATCAGAC 60.024 45.833 0.00 0.00 34.15 3.51
2512 2807 0.178876 TCCCCATCTCCTGGTCAACA 60.179 55.000 0.00 0.00 44.30 3.33
2529 2827 3.495100 CCACACATAGCCCATCTAACTCC 60.495 52.174 0.00 0.00 0.00 3.85
2533 2831 1.142870 GCCCACACATAGCCCATCTAA 59.857 52.381 0.00 0.00 0.00 2.10
2707 3014 1.974265 TTGGATTCAAGGCGTGTTCA 58.026 45.000 0.00 0.00 0.00 3.18
2859 3286 3.507233 GCATTGTGGAAGGACATCTCAAA 59.493 43.478 0.00 0.00 0.00 2.69
2860 3287 3.084039 GCATTGTGGAAGGACATCTCAA 58.916 45.455 0.00 0.00 0.00 3.02
2878 3305 1.298993 CTGGGTCTCTGCACTGCAT 59.701 57.895 3.64 0.00 38.13 3.96
2933 3360 3.305110 GGATTTTACCAACGTGCTTGTG 58.695 45.455 0.00 0.00 0.00 3.33
2938 3365 1.958417 CACGGATTTTACCAACGTGC 58.042 50.000 0.00 0.00 46.38 5.34
3311 3747 6.006449 ACAAAAGCATGTGAATACCTCTTCT 58.994 36.000 0.00 0.00 30.82 2.85
3384 4497 4.248058 GGCAAAACAAATCATGGGAGAAG 58.752 43.478 0.00 0.00 0.00 2.85
3501 4614 1.610624 CGTGTGGCACTTATCAGGGTT 60.611 52.381 19.83 0.00 31.34 4.11
3557 4670 3.927142 CCTCGAGTAACTAAACTTGCCAG 59.073 47.826 12.31 0.00 31.83 4.85
3583 4696 5.221402 TGCCATGCTTCACAATTAAAGTTGA 60.221 36.000 0.00 0.00 33.37 3.18
3653 4766 7.883229 AACTAAAATTGCCATACCGAAAAAG 57.117 32.000 0.00 0.00 0.00 2.27
3731 4844 7.557719 ACAGAAGGTGATTGATAATTTACCCAG 59.442 37.037 0.00 0.00 32.17 4.45
3776 4891 7.255590 GCAAACATATGAATGGTACTGCCTAAT 60.256 37.037 10.38 0.00 37.43 1.73
3817 4932 4.373156 AGCAACCCAGAAACTCAATAGT 57.627 40.909 0.00 0.00 37.65 2.12
4110 6696 5.981088 TGTCATCAATGTTTATTGCCACT 57.019 34.783 0.00 0.00 42.71 4.00
4216 6802 2.480073 CGCAAGGCCAACAGAATTATGG 60.480 50.000 5.01 0.22 37.29 2.74
4344 6930 8.865420 AAATACCGTAAGAGAGCTCTATGATA 57.135 34.615 18.25 0.27 39.39 2.15
4627 7213 5.428457 ACTCACCTATGATCAACCAACCATA 59.572 40.000 0.00 0.00 33.22 2.74
4646 7232 2.758736 AAGAGAGGATGTGCACTCAC 57.241 50.000 19.41 7.73 43.40 3.51
4741 7327 1.342175 GGGTAGACAGCCCTAGTCACT 60.342 57.143 0.00 0.00 42.81 3.41
4742 7328 1.112950 GGGTAGACAGCCCTAGTCAC 58.887 60.000 0.00 0.00 42.81 3.67
4758 7345 1.384643 GCCCATCTAGTCAGGGGGT 60.385 63.158 15.43 0.00 43.04 4.95
4802 7389 2.653234 AAGGATGCTAAGCTGATGGG 57.347 50.000 0.00 0.00 0.00 4.00
4901 7488 6.253512 CGTTTAGCAAAAATAGGAGCCATTTC 59.746 38.462 0.00 0.00 0.00 2.17
4915 7502 6.371809 AAATGAGTCACTCGTTTAGCAAAA 57.628 33.333 21.37 0.00 44.66 2.44
4926 7513 4.817318 AGGGAGAGAAAATGAGTCACTC 57.183 45.455 0.00 0.00 33.46 3.51
4987 7574 6.983906 TCTCCTACAGCATCTGATGAATTA 57.016 37.500 21.30 7.02 35.09 1.40
5018 7605 9.838339 GGTAGGAAAGATCAGATTATTTGAGAA 57.162 33.333 0.00 0.00 0.00 2.87
5138 7733 2.361483 TTGCGCACATGGCTCCAT 60.361 55.556 11.12 0.00 41.67 3.41
5146 7741 2.637025 GGTGTTCGTTGCGCACAT 59.363 55.556 11.12 0.00 35.41 3.21
5310 7905 1.900245 TACAGACACAGCGTAGACCA 58.100 50.000 0.00 0.00 0.00 4.02
5464 8060 6.752351 TGATCTAAAGAACGACAGTAGCATTC 59.248 38.462 0.00 0.00 0.00 2.67
5476 8072 3.152261 AGCCGACTGATCTAAAGAACG 57.848 47.619 0.00 0.00 0.00 3.95
5516 8113 4.870426 CCGTGAGCAACATTATACAAGTCT 59.130 41.667 0.00 0.00 0.00 3.24
5531 8128 2.935849 CACAAGCATATTACCGTGAGCA 59.064 45.455 0.00 0.00 0.00 4.26
5628 8225 6.582677 AAAACCGATACAATCATCAAACCA 57.417 33.333 0.00 0.00 0.00 3.67
5633 8230 5.635417 TGCAAAAACCGATACAATCATCA 57.365 34.783 0.00 0.00 0.00 3.07
5634 8231 6.264832 TCATGCAAAAACCGATACAATCATC 58.735 36.000 0.00 0.00 0.00 2.92
5635 8232 6.206395 TCATGCAAAAACCGATACAATCAT 57.794 33.333 0.00 0.00 0.00 2.45
5645 8242 3.663025 AGGGAAAATCATGCAAAAACCG 58.337 40.909 0.00 0.00 0.00 4.44
5655 8252 6.671779 TGCCCAATTAGTTAAGGGAAAATCAT 59.328 34.615 0.00 0.00 44.30 2.45
5664 8261 8.314021 AGAAGAAAATTGCCCAATTAGTTAAGG 58.686 33.333 6.67 0.00 39.88 2.69
5665 8262 9.710900 AAGAAGAAAATTGCCCAATTAGTTAAG 57.289 29.630 6.67 0.00 39.88 1.85
5715 8312 3.957383 TTTTTGAAACGGAGGCAGC 57.043 47.368 0.00 0.00 0.00 5.25
5852 8450 5.424757 ACCGATAAATTTCTTGTCGATCCA 58.575 37.500 13.40 0.00 34.46 3.41
5857 8455 5.779806 ACAGACCGATAAATTTCTTGTCG 57.220 39.130 0.00 1.36 0.00 4.35
5919 8543 4.496183 GTCTGCATACTACTTTCGTTCTCG 59.504 45.833 0.00 0.00 38.55 4.04
5953 8580 1.271325 TGGTGTTTGTGATGATCGGCT 60.271 47.619 0.00 0.00 0.00 5.52
6249 8876 4.208686 CTGGACCTAGGCGGCGAC 62.209 72.222 12.98 8.50 35.61 5.19
6252 8879 3.787001 AAGCTGGACCTAGGCGGC 61.787 66.667 9.30 10.48 35.61 6.53
6253 8880 2.187946 CAAGCTGGACCTAGGCGG 59.812 66.667 9.30 0.00 39.35 6.13
6254 8881 2.512515 GCAAGCTGGACCTAGGCG 60.513 66.667 9.30 0.00 0.00 5.52
6255 8882 1.153269 GAGCAAGCTGGACCTAGGC 60.153 63.158 9.30 1.17 0.00 3.93
6256 8883 0.835941 ATGAGCAAGCTGGACCTAGG 59.164 55.000 7.41 7.41 0.00 3.02
6257 8884 1.761784 AGATGAGCAAGCTGGACCTAG 59.238 52.381 0.00 0.00 0.00 3.02
6258 8885 1.871418 AGATGAGCAAGCTGGACCTA 58.129 50.000 0.00 0.00 0.00 3.08
6259 8886 0.990374 AAGATGAGCAAGCTGGACCT 59.010 50.000 0.00 0.00 0.00 3.85
6260 8887 1.065564 AGAAGATGAGCAAGCTGGACC 60.066 52.381 0.00 0.00 0.00 4.46
6261 8888 2.399916 AGAAGATGAGCAAGCTGGAC 57.600 50.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.