Multiple sequence alignment - TraesCS6B01G192700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G192700 chr6B 100.000 4615 0 0 1 4615 227074143 227069529 0.000000e+00 8523
1 TraesCS6B01G192700 chr6B 96.296 216 8 0 476 691 227090042 227089827 5.680000e-94 355
2 TraesCS6B01G192700 chr6D 93.797 3434 143 34 871 4270 128106103 128102706 0.000000e+00 5097
3 TraesCS6B01G192700 chr6A 93.796 3433 127 39 871 4270 150222174 150225553 0.000000e+00 5081
4 TraesCS6B01G192700 chr7A 96.291 701 22 4 1 699 499342798 499342100 0.000000e+00 1147
5 TraesCS6B01G192700 chr7A 92.627 217 15 1 476 691 483949247 483949463 1.250000e-80 311
6 TraesCS6B01G192700 chr2B 96.392 693 22 1 1 693 165055617 165056306 0.000000e+00 1138
7 TraesCS6B01G192700 chr2B 95.094 693 30 2 1 692 735815792 735815103 0.000000e+00 1088
8 TraesCS6B01G192700 chr2B 95.833 648 24 2 1 646 110459391 110460037 0.000000e+00 1044
9 TraesCS6B01G192700 chr2B 93.213 221 14 1 472 691 110455439 110455659 1.600000e-84 324
10 TraesCS6B01G192700 chr7B 95.520 692 30 1 1 691 84222564 84221873 0.000000e+00 1105
11 TraesCS6B01G192700 chr2A 86.667 405 41 12 1 400 512204444 512204048 1.970000e-118 436
12 TraesCS6B01G192700 chr5B 86.667 405 39 15 11 407 682250310 682250707 7.090000e-118 435
13 TraesCS6B01G192700 chr5B 86.199 413 42 15 2 407 338930635 338931039 2.550000e-117 433
14 TraesCS6B01G192700 chr5A 86.420 405 40 15 11 407 563779605 563780002 3.300000e-116 429
15 TraesCS6B01G192700 chr1B 92.202 218 16 1 472 688 9482255 9482038 1.610000e-79 307
16 TraesCS6B01G192700 chr4A 81.746 126 18 5 4137 4258 700424198 700424322 2.940000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G192700 chr6B 227069529 227074143 4614 True 8523 8523 100.000 1 4615 1 chr6B.!!$R1 4614
1 TraesCS6B01G192700 chr6D 128102706 128106103 3397 True 5097 5097 93.797 871 4270 1 chr6D.!!$R1 3399
2 TraesCS6B01G192700 chr6A 150222174 150225553 3379 False 5081 5081 93.796 871 4270 1 chr6A.!!$F1 3399
3 TraesCS6B01G192700 chr7A 499342100 499342798 698 True 1147 1147 96.291 1 699 1 chr7A.!!$R1 698
4 TraesCS6B01G192700 chr2B 165055617 165056306 689 False 1138 1138 96.392 1 693 1 chr2B.!!$F1 692
5 TraesCS6B01G192700 chr2B 735815103 735815792 689 True 1088 1088 95.094 1 692 1 chr2B.!!$R1 691
6 TraesCS6B01G192700 chr2B 110455439 110460037 4598 False 684 1044 94.523 1 691 2 chr2B.!!$F2 690
7 TraesCS6B01G192700 chr7B 84221873 84222564 691 True 1105 1105 95.520 1 691 1 chr7B.!!$R1 690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
835 4796 0.250234 TGATCGCTTTCTGGTGGGAG 59.750 55.0 0.00 0.00 0.00 4.30 F
840 4801 0.322906 GCTTTCTGGTGGGAGGGAAG 60.323 60.0 0.00 0.00 0.00 3.46 F
841 4802 0.329596 CTTTCTGGTGGGAGGGAAGG 59.670 60.0 0.00 0.00 0.00 3.46 F
1148 5111 0.470268 AGACCCTAGGGCTTCGGATC 60.470 60.0 28.88 15.63 39.32 3.36 F
2084 6056 0.826062 GGCAATGACCTCAAATGGGG 59.174 55.0 0.00 0.00 0.00 4.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2038 6010 0.677731 GCATGTACCCTTGCAGCTCA 60.678 55.000 7.45 0.00 40.48 4.26 R
2396 6368 1.687660 TGCAGCTGCTGGAATTTTTCA 59.312 42.857 36.61 13.97 42.66 2.69 R
2405 6377 2.033757 ACCTTCTGCAGCTGCTGG 59.966 61.111 35.85 30.79 42.66 4.85 R
3095 7070 3.323691 TCAAGCACTTTACTAGCACCTCA 59.676 43.478 0.00 0.00 0.00 3.86 R
3640 7615 0.108615 CTGACGACCAAGGTAGCCTG 60.109 60.000 0.00 0.00 32.13 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
468 4429 7.730364 ATCAAAAGAAGAGACGTTGTACAAT 57.270 32.000 12.26 0.00 0.00 2.71
494 4455 3.997021 GAGTGTTGAGAACCGACATCAAT 59.003 43.478 0.00 0.00 41.01 2.57
620 4581 1.335872 CCTTCACAATGCGTCCCAAAC 60.336 52.381 0.00 0.00 0.00 2.93
677 4638 9.770097 AAAGTATCAGATCATTCGTACAATCAT 57.230 29.630 0.00 0.00 0.00 2.45
703 4664 9.974750 TTTTTATCTTTACAAAAACAAAAGCGG 57.025 25.926 0.00 0.00 30.72 5.52
704 4665 7.701809 TTATCTTTACAAAAACAAAAGCGGG 57.298 32.000 0.00 0.00 31.68 6.13
705 4666 5.326200 TCTTTACAAAAACAAAAGCGGGA 57.674 34.783 0.00 0.00 31.68 5.14
706 4667 5.908341 TCTTTACAAAAACAAAAGCGGGAT 58.092 33.333 0.00 0.00 31.68 3.85
707 4668 7.040473 TCTTTACAAAAACAAAAGCGGGATA 57.960 32.000 0.00 0.00 31.68 2.59
708 4669 7.142680 TCTTTACAAAAACAAAAGCGGGATAG 58.857 34.615 0.00 0.00 31.68 2.08
709 4670 4.929819 ACAAAAACAAAAGCGGGATAGT 57.070 36.364 0.00 0.00 0.00 2.12
710 4671 5.270893 ACAAAAACAAAAGCGGGATAGTT 57.729 34.783 0.00 0.00 0.00 2.24
711 4672 5.047188 ACAAAAACAAAAGCGGGATAGTTG 58.953 37.500 0.00 0.00 0.00 3.16
712 4673 3.934457 AAACAAAAGCGGGATAGTTGG 57.066 42.857 0.00 0.00 0.00 3.77
713 4674 1.173913 ACAAAAGCGGGATAGTTGGC 58.826 50.000 0.00 0.00 0.00 4.52
714 4675 1.173043 CAAAAGCGGGATAGTTGGCA 58.827 50.000 0.00 0.00 0.00 4.92
715 4676 1.133025 CAAAAGCGGGATAGTTGGCAG 59.867 52.381 0.00 0.00 0.00 4.85
716 4677 0.328258 AAAGCGGGATAGTTGGCAGT 59.672 50.000 0.00 0.00 0.00 4.40
717 4678 0.328258 AAGCGGGATAGTTGGCAGTT 59.672 50.000 0.00 0.00 0.00 3.16
718 4679 0.392998 AGCGGGATAGTTGGCAGTTG 60.393 55.000 0.00 0.00 0.00 3.16
719 4680 1.376609 GCGGGATAGTTGGCAGTTGG 61.377 60.000 0.00 0.00 0.00 3.77
720 4681 1.376609 CGGGATAGTTGGCAGTTGGC 61.377 60.000 0.00 0.00 43.74 4.52
727 4688 2.124109 TGGCAGTTGGCACGGAAA 60.124 55.556 4.06 0.00 46.12 3.13
728 4689 1.754621 TGGCAGTTGGCACGGAAAA 60.755 52.632 4.06 0.00 46.12 2.29
729 4690 1.733402 TGGCAGTTGGCACGGAAAAG 61.733 55.000 4.06 0.00 46.12 2.27
730 4691 1.661509 GCAGTTGGCACGGAAAAGC 60.662 57.895 0.00 0.00 43.97 3.51
731 4692 2.032981 CAGTTGGCACGGAAAAGCT 58.967 52.632 0.00 0.00 0.00 3.74
732 4693 1.234821 CAGTTGGCACGGAAAAGCTA 58.765 50.000 0.00 0.00 0.00 3.32
733 4694 1.812571 CAGTTGGCACGGAAAAGCTAT 59.187 47.619 0.00 0.00 0.00 2.97
734 4695 2.084546 AGTTGGCACGGAAAAGCTATC 58.915 47.619 0.00 0.00 0.00 2.08
735 4696 2.084546 GTTGGCACGGAAAAGCTATCT 58.915 47.619 0.00 0.00 0.00 1.98
736 4697 3.055385 AGTTGGCACGGAAAAGCTATCTA 60.055 43.478 0.00 0.00 0.00 1.98
737 4698 3.838244 TGGCACGGAAAAGCTATCTAT 57.162 42.857 0.00 0.00 0.00 1.98
738 4699 4.150897 TGGCACGGAAAAGCTATCTATT 57.849 40.909 0.00 0.00 0.00 1.73
739 4700 4.523083 TGGCACGGAAAAGCTATCTATTT 58.477 39.130 0.00 0.00 0.00 1.40
740 4701 4.947388 TGGCACGGAAAAGCTATCTATTTT 59.053 37.500 0.00 0.00 0.00 1.82
741 4702 5.163663 TGGCACGGAAAAGCTATCTATTTTG 60.164 40.000 0.00 0.00 0.00 2.44
742 4703 5.065988 GGCACGGAAAAGCTATCTATTTTGA 59.934 40.000 0.00 0.00 0.00 2.69
743 4704 5.965918 GCACGGAAAAGCTATCTATTTTGAC 59.034 40.000 0.00 0.00 0.00 3.18
744 4705 6.403200 GCACGGAAAAGCTATCTATTTTGACA 60.403 38.462 0.00 0.00 0.00 3.58
745 4706 6.961554 CACGGAAAAGCTATCTATTTTGACAC 59.038 38.462 0.00 0.00 0.00 3.67
746 4707 6.093633 ACGGAAAAGCTATCTATTTTGACACC 59.906 38.462 0.00 0.00 0.00 4.16
747 4708 6.458342 CGGAAAAGCTATCTATTTTGACACCC 60.458 42.308 0.00 0.00 0.00 4.61
748 4709 6.377146 GGAAAAGCTATCTATTTTGACACCCA 59.623 38.462 0.00 0.00 0.00 4.51
749 4710 6.759497 AAAGCTATCTATTTTGACACCCAC 57.241 37.500 0.00 0.00 0.00 4.61
750 4711 5.435686 AGCTATCTATTTTGACACCCACA 57.564 39.130 0.00 0.00 0.00 4.17
751 4712 5.815581 AGCTATCTATTTTGACACCCACAA 58.184 37.500 0.00 0.00 0.00 3.33
752 4713 6.245408 AGCTATCTATTTTGACACCCACAAA 58.755 36.000 0.00 0.00 35.81 2.83
753 4714 6.719370 AGCTATCTATTTTGACACCCACAAAA 59.281 34.615 0.00 0.00 46.29 2.44
754 4715 7.232534 AGCTATCTATTTTGACACCCACAAAAA 59.767 33.333 0.00 0.00 45.70 1.94
771 4732 2.102070 AAAACATATCCGACGTGGCA 57.898 45.000 0.00 0.00 37.80 4.92
772 4733 2.325583 AAACATATCCGACGTGGCAT 57.674 45.000 0.00 0.00 37.80 4.40
773 4734 3.462483 AAACATATCCGACGTGGCATA 57.538 42.857 0.00 0.00 37.80 3.14
774 4735 3.678056 AACATATCCGACGTGGCATAT 57.322 42.857 0.00 0.00 37.80 1.78
775 4736 3.678056 ACATATCCGACGTGGCATATT 57.322 42.857 0.00 0.00 37.80 1.28
776 4737 3.585862 ACATATCCGACGTGGCATATTC 58.414 45.455 0.00 0.00 37.80 1.75
777 4738 3.006430 ACATATCCGACGTGGCATATTCA 59.994 43.478 0.00 0.00 37.80 2.57
778 4739 2.839486 ATCCGACGTGGCATATTCAT 57.161 45.000 0.00 0.00 37.80 2.57
779 4740 2.148916 TCCGACGTGGCATATTCATC 57.851 50.000 0.00 0.00 37.80 2.92
780 4741 1.686587 TCCGACGTGGCATATTCATCT 59.313 47.619 0.00 0.00 37.80 2.90
781 4742 2.061773 CCGACGTGGCATATTCATCTC 58.938 52.381 0.00 0.00 0.00 2.75
782 4743 2.061773 CGACGTGGCATATTCATCTCC 58.938 52.381 0.00 0.00 0.00 3.71
783 4744 2.417719 GACGTGGCATATTCATCTCCC 58.582 52.381 0.00 0.00 0.00 4.30
784 4745 2.037772 GACGTGGCATATTCATCTCCCT 59.962 50.000 0.00 0.00 0.00 4.20
785 4746 2.224378 ACGTGGCATATTCATCTCCCTG 60.224 50.000 0.00 0.00 0.00 4.45
786 4747 2.157738 GTGGCATATTCATCTCCCTGC 58.842 52.381 0.00 0.00 0.00 4.85
787 4748 2.060275 TGGCATATTCATCTCCCTGCT 58.940 47.619 0.00 0.00 0.00 4.24
788 4749 2.039480 TGGCATATTCATCTCCCTGCTC 59.961 50.000 0.00 0.00 0.00 4.26
789 4750 2.039480 GGCATATTCATCTCCCTGCTCA 59.961 50.000 0.00 0.00 0.00 4.26
790 4751 3.072944 GCATATTCATCTCCCTGCTCAC 58.927 50.000 0.00 0.00 0.00 3.51
791 4752 3.672808 CATATTCATCTCCCTGCTCACC 58.327 50.000 0.00 0.00 0.00 4.02
792 4753 0.842635 ATTCATCTCCCTGCTCACCC 59.157 55.000 0.00 0.00 0.00 4.61
793 4754 1.274703 TTCATCTCCCTGCTCACCCC 61.275 60.000 0.00 0.00 0.00 4.95
794 4755 2.367512 ATCTCCCTGCTCACCCCC 60.368 66.667 0.00 0.00 0.00 5.40
816 4777 4.431131 CCGCACCCCAGGCATCTT 62.431 66.667 0.00 0.00 0.00 2.40
817 4778 3.136123 CGCACCCCAGGCATCTTG 61.136 66.667 0.00 0.00 0.00 3.02
818 4779 2.356278 GCACCCCAGGCATCTTGA 59.644 61.111 0.00 0.00 0.00 3.02
819 4780 1.076485 GCACCCCAGGCATCTTGAT 60.076 57.895 0.00 0.00 0.00 2.57
820 4781 1.105759 GCACCCCAGGCATCTTGATC 61.106 60.000 0.00 0.00 0.00 2.92
821 4782 0.816825 CACCCCAGGCATCTTGATCG 60.817 60.000 0.00 0.00 0.00 3.69
822 4783 1.895707 CCCCAGGCATCTTGATCGC 60.896 63.158 0.00 0.00 0.00 4.58
823 4784 1.147824 CCCAGGCATCTTGATCGCT 59.852 57.895 0.00 0.00 0.00 4.93
824 4785 0.465097 CCCAGGCATCTTGATCGCTT 60.465 55.000 0.00 0.00 0.00 4.68
825 4786 1.386533 CCAGGCATCTTGATCGCTTT 58.613 50.000 0.00 0.00 0.00 3.51
826 4787 1.332997 CCAGGCATCTTGATCGCTTTC 59.667 52.381 0.00 0.00 0.00 2.62
827 4788 2.286872 CAGGCATCTTGATCGCTTTCT 58.713 47.619 0.00 0.00 0.00 2.52
828 4789 2.031807 CAGGCATCTTGATCGCTTTCTG 59.968 50.000 0.00 0.00 0.00 3.02
829 4790 1.332997 GGCATCTTGATCGCTTTCTGG 59.667 52.381 0.00 0.00 0.00 3.86
830 4791 2.012673 GCATCTTGATCGCTTTCTGGT 58.987 47.619 0.00 0.00 0.00 4.00
831 4792 2.223203 GCATCTTGATCGCTTTCTGGTG 60.223 50.000 0.00 0.00 0.00 4.17
832 4793 2.099141 TCTTGATCGCTTTCTGGTGG 57.901 50.000 0.00 0.00 0.00 4.61
833 4794 1.089920 CTTGATCGCTTTCTGGTGGG 58.910 55.000 0.00 0.00 0.00 4.61
834 4795 0.690192 TTGATCGCTTTCTGGTGGGA 59.310 50.000 0.00 0.00 0.00 4.37
835 4796 0.250234 TGATCGCTTTCTGGTGGGAG 59.750 55.000 0.00 0.00 0.00 4.30
836 4797 0.462759 GATCGCTTTCTGGTGGGAGG 60.463 60.000 0.00 0.00 0.00 4.30
837 4798 1.915078 ATCGCTTTCTGGTGGGAGGG 61.915 60.000 0.00 0.00 0.00 4.30
838 4799 2.592993 CGCTTTCTGGTGGGAGGGA 61.593 63.158 0.00 0.00 0.00 4.20
839 4800 1.767692 GCTTTCTGGTGGGAGGGAA 59.232 57.895 0.00 0.00 0.00 3.97
840 4801 0.322906 GCTTTCTGGTGGGAGGGAAG 60.323 60.000 0.00 0.00 0.00 3.46
841 4802 0.329596 CTTTCTGGTGGGAGGGAAGG 59.670 60.000 0.00 0.00 0.00 3.46
842 4803 1.140134 TTTCTGGTGGGAGGGAAGGG 61.140 60.000 0.00 0.00 0.00 3.95
843 4804 2.056099 TTCTGGTGGGAGGGAAGGGA 62.056 60.000 0.00 0.00 0.00 4.20
844 4805 2.204090 TGGTGGGAGGGAAGGGAC 60.204 66.667 0.00 0.00 0.00 4.46
845 4806 3.400054 GGTGGGAGGGAAGGGACG 61.400 72.222 0.00 0.00 0.00 4.79
846 4807 3.400054 GTGGGAGGGAAGGGACGG 61.400 72.222 0.00 0.00 0.00 4.79
847 4808 3.936566 TGGGAGGGAAGGGACGGT 61.937 66.667 0.00 0.00 0.00 4.83
848 4809 2.609921 GGGAGGGAAGGGACGGTT 60.610 66.667 0.00 0.00 0.00 4.44
849 4810 1.306397 GGGAGGGAAGGGACGGTTA 60.306 63.158 0.00 0.00 0.00 2.85
850 4811 1.620739 GGGAGGGAAGGGACGGTTAC 61.621 65.000 0.00 0.00 0.00 2.50
851 4812 1.620739 GGAGGGAAGGGACGGTTACC 61.621 65.000 0.00 0.00 0.00 2.85
934 4895 4.138722 CGCTCGCGCCTCTATAAG 57.861 61.111 0.00 0.00 0.00 1.73
935 4896 1.574925 CGCTCGCGCCTCTATAAGA 59.425 57.895 0.00 0.00 0.00 2.10
949 4912 6.346199 GCCTCTATAAGAAAGAAAGAATCGCG 60.346 42.308 0.00 0.00 0.00 5.87
950 4913 6.697892 CCTCTATAAGAAAGAAAGAATCGCGT 59.302 38.462 5.77 0.00 0.00 6.01
1066 5029 1.872679 GACGTCGAGATGAACGGCC 60.873 63.158 0.00 0.00 31.44 6.13
1068 5031 1.445410 CGTCGAGATGAACGGCCAA 60.445 57.895 2.24 0.00 31.44 4.52
1148 5111 0.470268 AGACCCTAGGGCTTCGGATC 60.470 60.000 28.88 15.63 39.32 3.36
1174 5138 2.408704 CGATAGCGTTTGATCGAATCCC 59.591 50.000 0.00 0.00 46.19 3.85
1191 5155 2.030401 CCGCACGGATGTTTCGGAA 61.030 57.895 2.01 0.00 41.60 4.30
1240 5208 3.696898 TGTACGTTTGTTTGATGTTGCC 58.303 40.909 0.00 0.00 0.00 4.52
1246 5214 2.596046 TTTGATGTTGCCGCCCGT 60.596 55.556 0.00 0.00 0.00 5.28
1325 5293 1.596260 CATGCTAATCGCTCAGGTGTG 59.404 52.381 0.00 0.00 40.11 3.82
1369 5339 2.359107 CATGCGCACACAGGAGGT 60.359 61.111 14.90 0.00 0.00 3.85
1397 5367 4.541705 CCCGAGATATGGAGTCCTATGAT 58.458 47.826 11.33 0.00 0.00 2.45
1398 5368 4.582656 CCCGAGATATGGAGTCCTATGATC 59.417 50.000 11.33 7.74 0.00 2.92
1399 5369 5.445069 CCGAGATATGGAGTCCTATGATCT 58.555 45.833 11.33 12.13 0.00 2.75
1400 5370 6.409810 CCCGAGATATGGAGTCCTATGATCTA 60.410 46.154 11.33 0.00 0.00 1.98
1401 5371 6.710295 CCGAGATATGGAGTCCTATGATCTAG 59.290 46.154 11.33 11.93 0.00 2.43
1402 5372 7.279615 CGAGATATGGAGTCCTATGATCTAGT 58.720 42.308 11.33 0.00 0.00 2.57
1403 5373 8.425703 CGAGATATGGAGTCCTATGATCTAGTA 58.574 40.741 11.33 0.00 0.00 1.82
1416 5386 7.883833 CCTATGATCTAGTACTAGTTACCTGCA 59.116 40.741 25.58 13.53 34.84 4.41
1421 5391 7.798596 TCTAGTACTAGTTACCTGCATGTAC 57.201 40.000 25.58 0.00 34.84 2.90
1546 5516 4.559153 CCCATTTCGGATCCAAAATATGC 58.441 43.478 10.36 0.00 36.56 3.14
1775 5745 5.588240 TGTCCTGTAAGTCATATGTTAGCG 58.412 41.667 1.90 0.00 0.00 4.26
1784 5754 9.640963 GTAAGTCATATGTTAGCGAATAGGAAT 57.359 33.333 1.90 0.00 0.00 3.01
1848 5818 9.838339 CTTCCATGAGGTATATAAAGTTTCTGT 57.162 33.333 0.00 0.00 35.89 3.41
1855 5825 9.937175 GAGGTATATAAAGTTTCTGTTTCATGC 57.063 33.333 0.00 0.00 0.00 4.06
1907 5877 3.064207 CAAGAACTAAAGCTGCACCGTA 58.936 45.455 1.02 0.00 0.00 4.02
1948 5918 8.539770 TCTTCTCAAACATCATCACTAGTTTC 57.460 34.615 0.00 0.00 32.34 2.78
1951 5921 8.315391 TCTCAAACATCATCACTAGTTTCTTG 57.685 34.615 0.00 0.00 32.34 3.02
1952 5922 8.150296 TCTCAAACATCATCACTAGTTTCTTGA 58.850 33.333 0.00 0.00 32.34 3.02
1954 5924 9.288576 TCAAACATCATCACTAGTTTCTTGATT 57.711 29.630 0.00 0.00 32.34 2.57
1955 5925 9.338291 CAAACATCATCACTAGTTTCTTGATTG 57.662 33.333 0.00 0.00 32.34 2.67
1963 5935 6.016024 TCACTAGTTTCTTGATTGCTGCAAAT 60.016 34.615 20.06 8.02 0.00 2.32
2081 6053 2.761767 TCCATGGCAATGACCTCAAATG 59.238 45.455 6.96 0.00 35.67 2.32
2084 6056 0.826062 GGCAATGACCTCAAATGGGG 59.174 55.000 0.00 0.00 0.00 4.96
2149 6121 3.354948 TGCTGATATGCTCCACTTTGT 57.645 42.857 0.00 0.00 0.00 2.83
2167 6139 7.225538 CCACTTTGTTGATCTCATAGTATGACC 59.774 40.741 8.84 2.76 35.06 4.02
2168 6140 7.984050 CACTTTGTTGATCTCATAGTATGACCT 59.016 37.037 8.84 0.00 35.06 3.85
2323 6295 5.032846 TGGAGATGAGGTAGGATTTCAACT 58.967 41.667 0.00 0.00 0.00 3.16
2339 6311 4.963276 TCAACTCTGAACCTTTGTTGTG 57.037 40.909 0.00 0.00 39.03 3.33
2340 6312 3.128589 TCAACTCTGAACCTTTGTTGTGC 59.871 43.478 0.00 0.00 39.03 4.57
2349 6321 7.230510 TCTGAACCTTTGTTGTGCAGTAAATAT 59.769 33.333 0.00 0.00 33.97 1.28
2396 6368 2.363306 TGTGTTGTCAGGAAGCCAAT 57.637 45.000 0.00 0.00 0.00 3.16
2405 6377 5.540911 TGTCAGGAAGCCAATGAAAAATTC 58.459 37.500 0.00 0.00 0.00 2.17
2663 6635 2.486982 CTCCATGCCAGTGAGAAACTTG 59.513 50.000 0.00 0.00 36.83 3.16
2669 6641 1.670811 CCAGTGAGAAACTTGCGTTGT 59.329 47.619 0.00 0.00 36.83 3.32
2730 6702 8.593679 TGTCTAAATTATTCTCAGGTCACAGAA 58.406 33.333 0.00 0.00 33.18 3.02
2882 6854 5.972107 AAGCTTGATAAACTGCAACTGAT 57.028 34.783 0.00 0.00 0.00 2.90
3095 7070 9.178758 GTCCCATTTTCTTCTACAATCTACAAT 57.821 33.333 0.00 0.00 0.00 2.71
3150 7125 0.035458 ACTCAACCGGCTCCTCAAAG 59.965 55.000 0.00 0.00 0.00 2.77
3161 7136 3.604582 GCTCCTCAAAGCTTCTGTATGT 58.395 45.455 0.00 0.00 39.27 2.29
3239 7214 6.544197 TGTATGCGAAATGGGCTAAAAAGATA 59.456 34.615 0.00 0.00 0.00 1.98
3242 7217 5.009610 TGCGAAATGGGCTAAAAAGATATCC 59.990 40.000 0.00 0.00 0.00 2.59
3291 7266 5.888901 TGGAGAGGAGAGTGAAGTAAGTTA 58.111 41.667 0.00 0.00 0.00 2.24
3309 7284 9.657728 AGTAAGTTACCCTACTAGCATTTATCT 57.342 33.333 9.46 0.00 0.00 1.98
3310 7285 9.694137 GTAAGTTACCCTACTAGCATTTATCTG 57.306 37.037 1.22 0.00 0.00 2.90
3313 7288 7.563924 AGTTACCCTACTAGCATTTATCTGTCA 59.436 37.037 0.00 0.00 0.00 3.58
3314 7289 6.808321 ACCCTACTAGCATTTATCTGTCAA 57.192 37.500 0.00 0.00 0.00 3.18
3316 7291 7.220030 ACCCTACTAGCATTTATCTGTCAATG 58.780 38.462 0.00 0.00 34.09 2.82
3376 7351 3.889538 AGTCGCTATCACCTGCTTATGTA 59.110 43.478 0.00 0.00 0.00 2.29
3569 7544 1.878656 CGGAGGAGGAGTTTGAGCGT 61.879 60.000 0.00 0.00 0.00 5.07
3596 7571 0.963355 AGAGGCTCGAGAAGAAGCGT 60.963 55.000 18.75 1.08 0.00 5.07
3597 7572 0.800300 GAGGCTCGAGAAGAAGCGTG 60.800 60.000 18.75 0.00 0.00 5.34
3636 7611 5.533154 TGATATGAATCTTGACATGCATGCA 59.467 36.000 26.53 25.04 32.93 3.96
3637 7612 3.775661 TGAATCTTGACATGCATGCAG 57.224 42.857 26.69 18.71 0.00 4.41
3638 7613 2.425668 TGAATCTTGACATGCATGCAGG 59.574 45.455 29.33 29.33 0.00 4.85
3639 7614 2.139323 ATCTTGACATGCATGCAGGT 57.861 45.000 35.66 35.66 43.97 4.00
3643 7618 4.331622 ACATGCATGCAGGTCAGG 57.668 55.556 30.80 14.87 36.06 3.86
3648 7623 4.547859 CATGCAGGTCAGGCTACC 57.452 61.111 0.00 5.35 40.06 3.18
3655 7630 1.218316 GGTCAGGCTACCTTGGTCG 59.782 63.158 0.00 0.00 36.53 4.79
3656 7631 1.542187 GGTCAGGCTACCTTGGTCGT 61.542 60.000 0.00 0.00 36.53 4.34
3704 7687 1.229209 GTGGAGTGGAGTGGAGGGA 60.229 63.158 0.00 0.00 0.00 4.20
3785 7768 1.067283 TGCAAGTGTGGTGTGGTTTTG 60.067 47.619 0.00 0.00 0.00 2.44
4048 8047 9.953565 AATCCAATTCAATTGATCAAACTCATT 57.046 25.926 13.09 6.38 42.83 2.57
4114 8113 9.710900 TGATTAATCAAGCTGGTACTATGTATG 57.289 33.333 15.82 0.00 33.08 2.39
4122 8121 7.941431 AGCTGGTACTATGTATGTAGTATCC 57.059 40.000 0.00 4.71 37.44 2.59
4124 8123 7.612244 AGCTGGTACTATGTATGTAGTATCCAG 59.388 40.741 22.01 22.01 45.22 3.86
4167 8166 9.511144 CGATGTTGATGTAGTGTTAATGTAGTA 57.489 33.333 0.00 0.00 0.00 1.82
4185 8184 9.832445 AATGTAGTAGGTAATGGACTGTTTATG 57.168 33.333 0.00 0.00 0.00 1.90
4198 8197 8.607441 TGGACTGTTTATGATTCTATGTATGC 57.393 34.615 0.00 0.00 0.00 3.14
4213 8212 8.583810 TCTATGTATGCTGTTAATTCGGTAAC 57.416 34.615 0.00 0.00 35.02 2.50
4275 8274 8.968242 GTTTGAAATTATTCTTTATCATCCCGC 58.032 33.333 0.00 0.00 36.48 6.13
4276 8275 7.815840 TGAAATTATTCTTTATCATCCCGCA 57.184 32.000 0.00 0.00 36.48 5.69
4277 8276 8.231692 TGAAATTATTCTTTATCATCCCGCAA 57.768 30.769 0.00 0.00 36.48 4.85
4278 8277 8.352201 TGAAATTATTCTTTATCATCCCGCAAG 58.648 33.333 0.00 0.00 36.48 4.01
4279 8278 8.463930 AAATTATTCTTTATCATCCCGCAAGA 57.536 30.769 0.00 0.00 43.02 3.02
4280 8279 8.463930 AATTATTCTTTATCATCCCGCAAGAA 57.536 30.769 0.00 0.00 37.75 2.52
4281 8280 7.873719 TTATTCTTTATCATCCCGCAAGAAA 57.126 32.000 0.00 0.00 37.11 2.52
4282 8281 6.773976 ATTCTTTATCATCCCGCAAGAAAA 57.226 33.333 0.00 0.00 37.11 2.29
4283 8282 6.582677 TTCTTTATCATCCCGCAAGAAAAA 57.417 33.333 0.00 0.00 43.02 1.94
4343 8342 9.632638 TTTTTGGGGATCATTTTGTTTATGAAA 57.367 25.926 0.00 0.00 35.77 2.69
4344 8343 8.614469 TTTGGGGATCATTTTGTTTATGAAAC 57.386 30.769 0.00 0.00 41.73 2.78
4353 8352 3.840890 TGTTTATGAAACACCGATGGC 57.159 42.857 0.69 0.00 45.79 4.40
4354 8353 2.160615 TGTTTATGAAACACCGATGGCG 59.839 45.455 0.69 0.00 45.79 5.69
4355 8354 0.730265 TTATGAAACACCGATGGCGC 59.270 50.000 0.00 0.00 35.83 6.53
4356 8355 0.391793 TATGAAACACCGATGGCGCA 60.392 50.000 10.83 0.00 35.83 6.09
4357 8356 1.647545 ATGAAACACCGATGGCGCAG 61.648 55.000 10.83 0.00 35.83 5.18
4374 8373 4.817987 CGCAGCTTTTCATTTCAATGAG 57.182 40.909 2.57 0.00 45.35 2.90
4375 8374 4.478699 CGCAGCTTTTCATTTCAATGAGA 58.521 39.130 2.57 0.00 45.35 3.27
4376 8375 4.557690 CGCAGCTTTTCATTTCAATGAGAG 59.442 41.667 2.57 6.51 45.35 3.20
4377 8376 4.863131 GCAGCTTTTCATTTCAATGAGAGG 59.137 41.667 12.95 7.21 45.35 3.69
4378 8377 5.336213 GCAGCTTTTCATTTCAATGAGAGGA 60.336 40.000 6.42 0.00 45.35 3.71
4379 8378 6.323266 CAGCTTTTCATTTCAATGAGAGGAG 58.677 40.000 6.42 3.93 45.35 3.69
4380 8379 6.008960 AGCTTTTCATTTCAATGAGAGGAGT 58.991 36.000 6.42 0.00 45.35 3.85
4381 8380 6.492772 AGCTTTTCATTTCAATGAGAGGAGTT 59.507 34.615 6.42 0.00 45.35 3.01
4382 8381 6.805760 GCTTTTCATTTCAATGAGAGGAGTTC 59.194 38.462 6.42 0.00 45.35 3.01
4383 8382 7.309073 GCTTTTCATTTCAATGAGAGGAGTTCT 60.309 37.037 6.42 0.00 45.35 3.01
4384 8383 9.224267 CTTTTCATTTCAATGAGAGGAGTTCTA 57.776 33.333 2.57 0.00 45.35 2.10
4385 8384 8.553459 TTTCATTTCAATGAGAGGAGTTCTAC 57.447 34.615 2.57 0.00 45.35 2.59
4386 8385 7.244886 TCATTTCAATGAGAGGAGTTCTACA 57.755 36.000 0.00 0.00 40.32 2.74
4387 8386 7.855375 TCATTTCAATGAGAGGAGTTCTACAT 58.145 34.615 0.00 0.00 40.32 2.29
4388 8387 8.981659 TCATTTCAATGAGAGGAGTTCTACATA 58.018 33.333 0.00 0.00 40.32 2.29
4389 8388 9.605275 CATTTCAATGAGAGGAGTTCTACATAA 57.395 33.333 0.00 0.00 38.70 1.90
4392 8391 9.436957 TTCAATGAGAGGAGTTCTACATAAAAC 57.563 33.333 0.00 0.00 35.87 2.43
4393 8392 8.816894 TCAATGAGAGGAGTTCTACATAAAACT 58.183 33.333 0.00 0.00 38.40 2.66
4396 8395 8.880991 TGAGAGGAGTTCTACATAAAACTACT 57.119 34.615 0.00 0.00 46.90 2.57
4399 8398 7.421087 AGGAGTTCTACATAAAACTACTCCC 57.579 40.000 13.20 0.00 41.82 4.30
4400 8399 7.190501 AGGAGTTCTACATAAAACTACTCCCT 58.809 38.462 13.20 0.00 41.82 4.20
4401 8400 7.679025 AGGAGTTCTACATAAAACTACTCCCTT 59.321 37.037 13.20 0.00 41.82 3.95
4402 8401 8.319881 GGAGTTCTACATAAAACTACTCCCTTT 58.680 37.037 0.00 0.00 42.65 3.11
4403 8402 9.152595 GAGTTCTACATAAAACTACTCCCTTTG 57.847 37.037 0.00 0.00 35.90 2.77
4404 8403 8.657712 AGTTCTACATAAAACTACTCCCTTTGT 58.342 33.333 0.00 0.00 34.05 2.83
4405 8404 9.281371 GTTCTACATAAAACTACTCCCTTTGTT 57.719 33.333 0.00 0.00 0.00 2.83
4406 8405 9.856162 TTCTACATAAAACTACTCCCTTTGTTT 57.144 29.630 0.00 0.00 34.59 2.83
4407 8406 9.498176 TCTACATAAAACTACTCCCTTTGTTTC 57.502 33.333 0.00 0.00 32.35 2.78
4408 8407 9.280174 CTACATAAAACTACTCCCTTTGTTTCA 57.720 33.333 0.00 0.00 32.35 2.69
4409 8408 8.706322 ACATAAAACTACTCCCTTTGTTTCAT 57.294 30.769 0.00 0.00 32.35 2.57
4410 8409 9.143155 ACATAAAACTACTCCCTTTGTTTCATT 57.857 29.630 0.00 0.00 32.35 2.57
4414 8413 8.706322 AAACTACTCCCTTTGTTTCATTATGT 57.294 30.769 0.00 0.00 0.00 2.29
4415 8414 9.802039 AAACTACTCCCTTTGTTTCATTATGTA 57.198 29.630 0.00 0.00 0.00 2.29
4416 8415 9.802039 AACTACTCCCTTTGTTTCATTATGTAA 57.198 29.630 0.00 0.00 0.00 2.41
4417 8416 9.449719 ACTACTCCCTTTGTTTCATTATGTAAG 57.550 33.333 0.00 0.00 0.00 2.34
4418 8417 9.667107 CTACTCCCTTTGTTTCATTATGTAAGA 57.333 33.333 0.00 0.00 0.00 2.10
4419 8418 8.336801 ACTCCCTTTGTTTCATTATGTAAGAC 57.663 34.615 0.00 0.00 0.00 3.01
4420 8419 7.942341 ACTCCCTTTGTTTCATTATGTAAGACA 59.058 33.333 0.00 0.00 0.00 3.41
4421 8420 8.335532 TCCCTTTGTTTCATTATGTAAGACAG 57.664 34.615 0.00 0.00 0.00 3.51
4422 8421 8.160765 TCCCTTTGTTTCATTATGTAAGACAGA 58.839 33.333 0.00 0.00 0.00 3.41
4423 8422 8.237267 CCCTTTGTTTCATTATGTAAGACAGAC 58.763 37.037 0.00 0.00 0.00 3.51
4424 8423 7.957484 CCTTTGTTTCATTATGTAAGACAGACG 59.043 37.037 0.00 0.00 0.00 4.18
4425 8424 7.956420 TTGTTTCATTATGTAAGACAGACGT 57.044 32.000 0.00 0.00 0.00 4.34
4426 8425 7.576750 TGTTTCATTATGTAAGACAGACGTC 57.423 36.000 7.70 7.70 42.95 4.34
4438 8437 3.512680 GACAGACGTCTTACATTCTGGG 58.487 50.000 17.26 2.81 39.91 4.45
4439 8438 3.162666 ACAGACGTCTTACATTCTGGGA 58.837 45.455 17.26 0.00 39.91 4.37
4440 8439 3.056749 ACAGACGTCTTACATTCTGGGAC 60.057 47.826 17.26 0.00 39.91 4.46
4441 8440 3.056821 CAGACGTCTTACATTCTGGGACA 60.057 47.826 17.26 0.00 33.25 4.02
4454 8453 1.383963 TGGGACAGAGGGAGTAGAGT 58.616 55.000 0.00 0.00 0.00 3.24
4455 8454 2.570098 TGGGACAGAGGGAGTAGAGTA 58.430 52.381 0.00 0.00 0.00 2.59
4456 8455 3.132056 TGGGACAGAGGGAGTAGAGTAT 58.868 50.000 0.00 0.00 0.00 2.12
4457 8456 4.313362 TGGGACAGAGGGAGTAGAGTATA 58.687 47.826 0.00 0.00 0.00 1.47
4458 8457 4.351407 TGGGACAGAGGGAGTAGAGTATAG 59.649 50.000 0.00 0.00 0.00 1.31
4459 8458 4.598373 GGGACAGAGGGAGTAGAGTATAGA 59.402 50.000 0.00 0.00 0.00 1.98
4460 8459 5.073417 GGGACAGAGGGAGTAGAGTATAGAA 59.927 48.000 0.00 0.00 0.00 2.10
4461 8460 6.410621 GGGACAGAGGGAGTAGAGTATAGAAA 60.411 46.154 0.00 0.00 0.00 2.52
4462 8461 6.487668 GGACAGAGGGAGTAGAGTATAGAAAC 59.512 46.154 0.00 0.00 0.00 2.78
4463 8462 6.971340 ACAGAGGGAGTAGAGTATAGAAACA 58.029 40.000 0.00 0.00 0.00 2.83
4464 8463 7.411808 ACAGAGGGAGTAGAGTATAGAAACAA 58.588 38.462 0.00 0.00 0.00 2.83
4465 8464 7.339976 ACAGAGGGAGTAGAGTATAGAAACAAC 59.660 40.741 0.00 0.00 0.00 3.32
4466 8465 7.339721 CAGAGGGAGTAGAGTATAGAAACAACA 59.660 40.741 0.00 0.00 0.00 3.33
4467 8466 7.894364 AGAGGGAGTAGAGTATAGAAACAACAA 59.106 37.037 0.00 0.00 0.00 2.83
4468 8467 7.838884 AGGGAGTAGAGTATAGAAACAACAAC 58.161 38.462 0.00 0.00 0.00 3.32
4469 8468 7.453752 AGGGAGTAGAGTATAGAAACAACAACA 59.546 37.037 0.00 0.00 0.00 3.33
4470 8469 8.092687 GGGAGTAGAGTATAGAAACAACAACAA 58.907 37.037 0.00 0.00 0.00 2.83
4471 8470 8.923683 GGAGTAGAGTATAGAAACAACAACAAC 58.076 37.037 0.00 0.00 0.00 3.32
4472 8471 9.472361 GAGTAGAGTATAGAAACAACAACAACA 57.528 33.333 0.00 0.00 0.00 3.33
4473 8472 9.826574 AGTAGAGTATAGAAACAACAACAACAA 57.173 29.630 0.00 0.00 0.00 2.83
4481 8480 6.932051 AGAAACAACAACAACAATTATTGCG 58.068 32.000 4.68 0.00 32.47 4.85
4482 8481 4.707210 ACAACAACAACAATTATTGCGC 57.293 36.364 0.00 0.00 32.47 6.09
4483 8482 4.367450 ACAACAACAACAATTATTGCGCT 58.633 34.783 9.73 0.00 32.47 5.92
4484 8483 4.208873 ACAACAACAACAATTATTGCGCTG 59.791 37.500 9.73 0.00 32.47 5.18
4485 8484 2.730928 ACAACAACAATTATTGCGCTGC 59.269 40.909 9.73 0.00 32.47 5.25
4486 8485 2.721274 ACAACAATTATTGCGCTGCA 57.279 40.000 9.73 0.00 36.47 4.41
4495 8494 2.884146 TTGCGCTGCAAACAACATC 58.116 47.368 9.73 0.00 45.96 3.06
4496 8495 0.101939 TTGCGCTGCAAACAACATCA 59.898 45.000 9.73 0.00 45.96 3.07
4497 8496 0.318022 TGCGCTGCAAACAACATCAG 60.318 50.000 9.73 0.00 34.76 2.90
4498 8497 1.611592 GCGCTGCAAACAACATCAGC 61.612 55.000 0.00 3.24 46.01 4.26
4511 8510 2.685850 CATCAGCAGATGTGAGGTGA 57.314 50.000 10.76 0.00 45.28 4.02
4513 8512 2.975732 TCAGCAGATGTGAGGTGATC 57.024 50.000 0.00 0.00 37.34 2.92
4514 8513 2.181975 TCAGCAGATGTGAGGTGATCA 58.818 47.619 0.00 0.00 37.34 2.92
4515 8514 2.770232 TCAGCAGATGTGAGGTGATCAT 59.230 45.455 0.00 0.00 40.92 2.45
4516 8515 3.199289 TCAGCAGATGTGAGGTGATCATT 59.801 43.478 0.00 0.00 40.92 2.57
4517 8516 3.560481 CAGCAGATGTGAGGTGATCATTC 59.440 47.826 0.00 0.67 40.92 2.67
4518 8517 2.877168 GCAGATGTGAGGTGATCATTCC 59.123 50.000 0.00 0.00 40.92 3.01
4519 8518 3.129109 CAGATGTGAGGTGATCATTCCG 58.871 50.000 0.00 0.00 40.92 4.30
4520 8519 3.033909 AGATGTGAGGTGATCATTCCGA 58.966 45.455 0.00 0.00 40.92 4.55
4521 8520 2.672961 TGTGAGGTGATCATTCCGAC 57.327 50.000 0.00 0.00 40.92 4.79
4522 8521 2.179427 TGTGAGGTGATCATTCCGACT 58.821 47.619 0.00 0.00 40.92 4.18
4523 8522 2.166459 TGTGAGGTGATCATTCCGACTC 59.834 50.000 0.00 1.57 40.92 3.36
4524 8523 2.428890 GTGAGGTGATCATTCCGACTCT 59.571 50.000 0.00 0.00 40.92 3.24
4525 8524 3.632604 GTGAGGTGATCATTCCGACTCTA 59.367 47.826 0.00 0.00 40.92 2.43
4526 8525 3.885901 TGAGGTGATCATTCCGACTCTAG 59.114 47.826 0.00 0.00 31.12 2.43
4527 8526 3.886505 GAGGTGATCATTCCGACTCTAGT 59.113 47.826 0.00 0.00 0.00 2.57
4528 8527 3.634448 AGGTGATCATTCCGACTCTAGTG 59.366 47.826 0.00 0.00 0.00 2.74
4529 8528 3.243569 GGTGATCATTCCGACTCTAGTGG 60.244 52.174 0.00 0.00 0.00 4.00
4530 8529 3.381908 GTGATCATTCCGACTCTAGTGGT 59.618 47.826 0.00 0.00 0.00 4.16
4531 8530 3.632604 TGATCATTCCGACTCTAGTGGTC 59.367 47.826 0.00 8.01 0.00 4.02
4538 8537 0.736053 GACTCTAGTGGTCGCTCTGG 59.264 60.000 0.00 0.00 0.00 3.86
4539 8538 0.038455 ACTCTAGTGGTCGCTCTGGT 59.962 55.000 0.00 0.00 0.00 4.00
4540 8539 0.453793 CTCTAGTGGTCGCTCTGGTG 59.546 60.000 0.00 0.00 0.00 4.17
4541 8540 0.965866 TCTAGTGGTCGCTCTGGTGG 60.966 60.000 0.00 0.00 0.00 4.61
4542 8541 1.949847 CTAGTGGTCGCTCTGGTGGG 61.950 65.000 0.00 0.00 0.00 4.61
4543 8542 4.394712 GTGGTCGCTCTGGTGGGG 62.395 72.222 0.00 0.00 0.00 4.96
4544 8543 4.631740 TGGTCGCTCTGGTGGGGA 62.632 66.667 0.00 0.00 0.00 4.81
4545 8544 4.083862 GGTCGCTCTGGTGGGGAC 62.084 72.222 0.00 0.00 43.07 4.46
4546 8545 3.311110 GTCGCTCTGGTGGGGACA 61.311 66.667 0.00 0.00 43.21 4.02
4547 8546 2.284625 TCGCTCTGGTGGGGACAT 60.285 61.111 0.00 0.00 46.14 3.06
4548 8547 2.124983 CGCTCTGGTGGGGACATG 60.125 66.667 0.00 0.00 46.14 3.21
4549 8548 2.659063 CGCTCTGGTGGGGACATGA 61.659 63.158 0.00 0.00 46.14 3.07
4550 8549 1.918253 GCTCTGGTGGGGACATGAT 59.082 57.895 0.00 0.00 46.14 2.45
4551 8550 0.179034 GCTCTGGTGGGGACATGATC 60.179 60.000 0.00 0.00 46.14 2.92
4552 8551 1.504912 CTCTGGTGGGGACATGATCT 58.495 55.000 0.00 0.00 46.14 2.75
4553 8552 1.842562 CTCTGGTGGGGACATGATCTT 59.157 52.381 0.00 0.00 46.14 2.40
4554 8553 1.561076 TCTGGTGGGGACATGATCTTG 59.439 52.381 0.00 7.04 46.14 3.02
4555 8554 0.034186 TGGTGGGGACATGATCTTGC 60.034 55.000 8.45 2.23 46.14 4.01
4556 8555 1.097547 GGTGGGGACATGATCTTGCG 61.098 60.000 8.45 0.00 46.14 4.85
4557 8556 1.097547 GTGGGGACATGATCTTGCGG 61.098 60.000 8.45 0.00 46.14 5.69
4558 8557 2.189499 GGGGACATGATCTTGCGGC 61.189 63.158 8.45 0.00 0.00 6.53
4559 8558 2.537560 GGGACATGATCTTGCGGCG 61.538 63.158 0.51 0.51 0.00 6.46
4560 8559 1.521457 GGACATGATCTTGCGGCGA 60.521 57.895 12.98 0.00 0.00 5.54
4561 8560 1.638467 GACATGATCTTGCGGCGAC 59.362 57.895 12.98 2.02 0.00 5.19
4562 8561 0.807667 GACATGATCTTGCGGCGACT 60.808 55.000 12.98 0.00 0.00 4.18
4563 8562 0.807667 ACATGATCTTGCGGCGACTC 60.808 55.000 12.98 0.00 0.00 3.36
4564 8563 1.589993 ATGATCTTGCGGCGACTCG 60.590 57.895 12.98 0.00 0.00 4.18
4575 8574 3.691342 CGACTCGCCTGGGACCAA 61.691 66.667 0.00 0.00 0.00 3.67
4576 8575 2.747686 GACTCGCCTGGGACCAAA 59.252 61.111 0.00 0.00 0.00 3.28
4577 8576 1.299976 GACTCGCCTGGGACCAAAT 59.700 57.895 0.00 0.00 0.00 2.32
4578 8577 0.744771 GACTCGCCTGGGACCAAATC 60.745 60.000 0.00 0.00 0.00 2.17
4579 8578 1.299648 CTCGCCTGGGACCAAATCA 59.700 57.895 0.00 0.00 0.00 2.57
4580 8579 0.322456 CTCGCCTGGGACCAAATCAA 60.322 55.000 0.00 0.00 0.00 2.57
4581 8580 0.331278 TCGCCTGGGACCAAATCAAT 59.669 50.000 0.00 0.00 0.00 2.57
4582 8581 1.562008 TCGCCTGGGACCAAATCAATA 59.438 47.619 0.00 0.00 0.00 1.90
4583 8582 1.676006 CGCCTGGGACCAAATCAATAC 59.324 52.381 0.00 0.00 0.00 1.89
4584 8583 2.683742 CGCCTGGGACCAAATCAATACT 60.684 50.000 0.00 0.00 0.00 2.12
4585 8584 3.365472 GCCTGGGACCAAATCAATACTT 58.635 45.455 0.00 0.00 0.00 2.24
4586 8585 3.381590 GCCTGGGACCAAATCAATACTTC 59.618 47.826 0.00 0.00 0.00 3.01
4587 8586 4.599041 CCTGGGACCAAATCAATACTTCA 58.401 43.478 0.00 0.00 0.00 3.02
4588 8587 5.203528 CCTGGGACCAAATCAATACTTCAT 58.796 41.667 0.00 0.00 0.00 2.57
4589 8588 5.300286 CCTGGGACCAAATCAATACTTCATC 59.700 44.000 0.00 0.00 0.00 2.92
4590 8589 5.825532 TGGGACCAAATCAATACTTCATCA 58.174 37.500 0.00 0.00 0.00 3.07
4591 8590 6.434302 TGGGACCAAATCAATACTTCATCAT 58.566 36.000 0.00 0.00 0.00 2.45
4592 8591 6.321945 TGGGACCAAATCAATACTTCATCATG 59.678 38.462 0.00 0.00 0.00 3.07
4593 8592 6.211515 GGACCAAATCAATACTTCATCATGC 58.788 40.000 0.00 0.00 0.00 4.06
4594 8593 6.183360 GGACCAAATCAATACTTCATCATGCA 60.183 38.462 0.00 0.00 0.00 3.96
4595 8594 7.356089 ACCAAATCAATACTTCATCATGCAT 57.644 32.000 0.00 0.00 0.00 3.96
4596 8595 7.788026 ACCAAATCAATACTTCATCATGCATT 58.212 30.769 0.00 0.00 0.00 3.56
4597 8596 7.709182 ACCAAATCAATACTTCATCATGCATTG 59.291 33.333 0.00 0.00 0.00 2.82
4598 8597 7.923878 CCAAATCAATACTTCATCATGCATTGA 59.076 33.333 0.00 0.00 36.96 2.57
4599 8598 8.968242 CAAATCAATACTTCATCATGCATTGAG 58.032 33.333 0.00 0.00 37.89 3.02
4600 8599 7.818997 ATCAATACTTCATCATGCATTGAGT 57.181 32.000 0.00 3.00 37.89 3.41
4601 8600 7.634671 TCAATACTTCATCATGCATTGAGTT 57.365 32.000 0.00 0.00 37.89 3.01
4602 8601 7.477494 TCAATACTTCATCATGCATTGAGTTG 58.523 34.615 0.00 4.45 37.89 3.16
4603 8602 7.337436 TCAATACTTCATCATGCATTGAGTTGA 59.663 33.333 0.00 6.50 37.89 3.18
4604 8603 5.970317 ACTTCATCATGCATTGAGTTGAA 57.030 34.783 0.00 2.85 37.89 2.69
4605 8604 6.525578 ACTTCATCATGCATTGAGTTGAAT 57.474 33.333 0.00 0.00 37.89 2.57
4606 8605 6.561614 ACTTCATCATGCATTGAGTTGAATC 58.438 36.000 0.00 0.00 37.89 2.52
4607 8606 5.509716 TCATCATGCATTGAGTTGAATCC 57.490 39.130 0.00 0.00 37.89 3.01
4608 8607 4.951094 TCATCATGCATTGAGTTGAATCCA 59.049 37.500 0.00 0.00 37.89 3.41
4609 8608 5.596772 TCATCATGCATTGAGTTGAATCCAT 59.403 36.000 0.00 0.00 37.89 3.41
4610 8609 5.925506 TCATGCATTGAGTTGAATCCATT 57.074 34.783 0.00 0.00 0.00 3.16
4611 8610 7.285858 TCATCATGCATTGAGTTGAATCCATTA 59.714 33.333 0.00 0.00 37.89 1.90
4612 8611 7.591421 TCATGCATTGAGTTGAATCCATTAT 57.409 32.000 0.00 0.00 0.00 1.28
4613 8612 8.014070 TCATGCATTGAGTTGAATCCATTATT 57.986 30.769 0.00 0.00 0.00 1.40
4614 8613 7.923878 TCATGCATTGAGTTGAATCCATTATTG 59.076 33.333 0.00 0.00 0.00 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
468 4429 0.761323 TCGGTTCTCAACACTCCCCA 60.761 55.000 0.00 0.00 0.00 4.96
494 4455 1.006832 GATTCGCTAAAGCCGCTTCA 58.993 50.000 5.98 0.00 37.91 3.02
523 4484 6.030228 ACACTAATAACCGCTAACTACGTTC 58.970 40.000 0.00 0.00 0.00 3.95
677 4638 9.974750 CCGCTTTTGTTTTTGTAAAGATAAAAA 57.025 25.926 0.00 0.00 34.42 1.94
695 4656 1.133025 CTGCCAACTATCCCGCTTTTG 59.867 52.381 0.00 0.00 0.00 2.44
697 4658 0.328258 ACTGCCAACTATCCCGCTTT 59.672 50.000 0.00 0.00 0.00 3.51
698 4659 0.328258 AACTGCCAACTATCCCGCTT 59.672 50.000 0.00 0.00 0.00 4.68
700 4661 1.376609 CCAACTGCCAACTATCCCGC 61.377 60.000 0.00 0.00 0.00 6.13
701 4662 1.376609 GCCAACTGCCAACTATCCCG 61.377 60.000 0.00 0.00 0.00 5.14
702 4663 0.323360 TGCCAACTGCCAACTATCCC 60.323 55.000 0.00 0.00 40.16 3.85
703 4664 0.811281 GTGCCAACTGCCAACTATCC 59.189 55.000 0.00 0.00 40.16 2.59
704 4665 0.447801 CGTGCCAACTGCCAACTATC 59.552 55.000 0.00 0.00 40.16 2.08
705 4666 0.960364 CCGTGCCAACTGCCAACTAT 60.960 55.000 0.00 0.00 40.16 2.12
706 4667 1.599518 CCGTGCCAACTGCCAACTA 60.600 57.895 0.00 0.00 40.16 2.24
707 4668 2.902423 TTCCGTGCCAACTGCCAACT 62.902 55.000 0.00 0.00 40.16 3.16
708 4669 2.010582 TTTCCGTGCCAACTGCCAAC 62.011 55.000 0.00 0.00 40.16 3.77
709 4670 1.323271 TTTTCCGTGCCAACTGCCAA 61.323 50.000 0.00 0.00 40.16 4.52
710 4671 1.733402 CTTTTCCGTGCCAACTGCCA 61.733 55.000 0.00 0.00 40.16 4.92
711 4672 1.007387 CTTTTCCGTGCCAACTGCC 60.007 57.895 0.00 0.00 40.16 4.85
712 4673 1.661509 GCTTTTCCGTGCCAACTGC 60.662 57.895 0.00 0.00 41.77 4.40
713 4674 1.234821 TAGCTTTTCCGTGCCAACTG 58.765 50.000 0.00 0.00 0.00 3.16
714 4675 2.084546 GATAGCTTTTCCGTGCCAACT 58.915 47.619 0.00 0.00 0.00 3.16
715 4676 2.084546 AGATAGCTTTTCCGTGCCAAC 58.915 47.619 0.00 0.00 0.00 3.77
716 4677 2.489938 AGATAGCTTTTCCGTGCCAA 57.510 45.000 0.00 0.00 0.00 4.52
717 4678 3.838244 ATAGATAGCTTTTCCGTGCCA 57.162 42.857 0.00 0.00 0.00 4.92
718 4679 5.065988 TCAAAATAGATAGCTTTTCCGTGCC 59.934 40.000 0.00 0.00 0.00 5.01
719 4680 5.965918 GTCAAAATAGATAGCTTTTCCGTGC 59.034 40.000 0.00 0.00 0.00 5.34
720 4681 6.961554 GTGTCAAAATAGATAGCTTTTCCGTG 59.038 38.462 0.00 0.00 0.00 4.94
721 4682 6.093633 GGTGTCAAAATAGATAGCTTTTCCGT 59.906 38.462 0.00 0.00 0.00 4.69
722 4683 6.458342 GGGTGTCAAAATAGATAGCTTTTCCG 60.458 42.308 0.00 0.00 0.00 4.30
723 4684 6.377146 TGGGTGTCAAAATAGATAGCTTTTCC 59.623 38.462 0.00 0.00 0.00 3.13
724 4685 7.094377 TGTGGGTGTCAAAATAGATAGCTTTTC 60.094 37.037 0.00 0.00 0.00 2.29
725 4686 6.719370 TGTGGGTGTCAAAATAGATAGCTTTT 59.281 34.615 0.00 0.00 0.00 2.27
726 4687 6.245408 TGTGGGTGTCAAAATAGATAGCTTT 58.755 36.000 0.00 0.00 0.00 3.51
727 4688 5.815581 TGTGGGTGTCAAAATAGATAGCTT 58.184 37.500 0.00 0.00 0.00 3.74
728 4689 5.435686 TGTGGGTGTCAAAATAGATAGCT 57.564 39.130 0.00 0.00 0.00 3.32
729 4690 6.509418 TTTGTGGGTGTCAAAATAGATAGC 57.491 37.500 0.00 0.00 32.86 2.97
751 4712 2.428491 TGCCACGTCGGATATGTTTTT 58.572 42.857 8.04 0.00 36.56 1.94
752 4713 2.102070 TGCCACGTCGGATATGTTTT 57.898 45.000 8.04 0.00 36.56 2.43
753 4714 2.325583 ATGCCACGTCGGATATGTTT 57.674 45.000 8.04 0.00 36.56 2.83
754 4715 3.678056 ATATGCCACGTCGGATATGTT 57.322 42.857 6.39 0.00 36.56 2.71
755 4716 3.006430 TGAATATGCCACGTCGGATATGT 59.994 43.478 7.87 0.00 36.56 2.29
756 4717 3.584834 TGAATATGCCACGTCGGATATG 58.415 45.455 7.87 0.00 36.56 1.78
757 4718 3.953712 TGAATATGCCACGTCGGATAT 57.046 42.857 1.42 1.42 36.56 1.63
758 4719 3.509967 AGATGAATATGCCACGTCGGATA 59.490 43.478 8.04 2.58 36.56 2.59
759 4720 2.300152 AGATGAATATGCCACGTCGGAT 59.700 45.455 8.04 0.12 36.56 4.18
760 4721 1.686587 AGATGAATATGCCACGTCGGA 59.313 47.619 8.04 0.00 36.56 4.55
761 4722 2.061773 GAGATGAATATGCCACGTCGG 58.938 52.381 0.00 0.00 38.11 4.79
762 4723 2.061773 GGAGATGAATATGCCACGTCG 58.938 52.381 0.00 0.00 0.00 5.12
763 4724 2.037772 AGGGAGATGAATATGCCACGTC 59.962 50.000 0.00 0.00 31.30 4.34
764 4725 2.050144 AGGGAGATGAATATGCCACGT 58.950 47.619 0.00 0.00 31.30 4.49
765 4726 2.420642 CAGGGAGATGAATATGCCACG 58.579 52.381 0.00 0.00 31.30 4.94
766 4727 2.157738 GCAGGGAGATGAATATGCCAC 58.842 52.381 0.00 0.00 31.30 5.01
767 4728 2.039480 GAGCAGGGAGATGAATATGCCA 59.961 50.000 0.00 0.00 31.30 4.92
768 4729 2.039480 TGAGCAGGGAGATGAATATGCC 59.961 50.000 0.00 0.00 34.24 4.40
769 4730 3.072944 GTGAGCAGGGAGATGAATATGC 58.927 50.000 0.00 0.00 0.00 3.14
770 4731 3.558746 GGGTGAGCAGGGAGATGAATATG 60.559 52.174 0.00 0.00 0.00 1.78
771 4732 2.641815 GGGTGAGCAGGGAGATGAATAT 59.358 50.000 0.00 0.00 0.00 1.28
772 4733 2.050144 GGGTGAGCAGGGAGATGAATA 58.950 52.381 0.00 0.00 0.00 1.75
773 4734 0.842635 GGGTGAGCAGGGAGATGAAT 59.157 55.000 0.00 0.00 0.00 2.57
774 4735 1.274703 GGGGTGAGCAGGGAGATGAA 61.275 60.000 0.00 0.00 0.00 2.57
775 4736 1.690633 GGGGTGAGCAGGGAGATGA 60.691 63.158 0.00 0.00 0.00 2.92
776 4737 2.750657 GGGGGTGAGCAGGGAGATG 61.751 68.421 0.00 0.00 0.00 2.90
777 4738 2.367512 GGGGGTGAGCAGGGAGAT 60.368 66.667 0.00 0.00 0.00 2.75
799 4760 4.431131 AAGATGCCTGGGGTGCGG 62.431 66.667 0.00 0.00 0.00 5.69
800 4761 2.898920 ATCAAGATGCCTGGGGTGCG 62.899 60.000 0.00 0.00 0.00 5.34
801 4762 1.076485 ATCAAGATGCCTGGGGTGC 60.076 57.895 0.00 0.00 0.00 5.01
802 4763 0.816825 CGATCAAGATGCCTGGGGTG 60.817 60.000 0.00 0.00 0.00 4.61
803 4764 1.528824 CGATCAAGATGCCTGGGGT 59.471 57.895 0.00 0.00 0.00 4.95
804 4765 1.895707 GCGATCAAGATGCCTGGGG 60.896 63.158 0.00 0.00 0.00 4.96
805 4766 0.465097 AAGCGATCAAGATGCCTGGG 60.465 55.000 0.00 0.00 0.00 4.45
806 4767 1.332997 GAAAGCGATCAAGATGCCTGG 59.667 52.381 0.00 0.00 0.00 4.45
807 4768 2.031807 CAGAAAGCGATCAAGATGCCTG 59.968 50.000 0.00 0.00 0.00 4.85
808 4769 2.286872 CAGAAAGCGATCAAGATGCCT 58.713 47.619 0.00 0.00 0.00 4.75
809 4770 1.332997 CCAGAAAGCGATCAAGATGCC 59.667 52.381 0.00 0.00 0.00 4.40
810 4771 2.012673 ACCAGAAAGCGATCAAGATGC 58.987 47.619 0.00 0.00 0.00 3.91
811 4772 2.353889 CCACCAGAAAGCGATCAAGATG 59.646 50.000 0.00 0.00 0.00 2.90
812 4773 2.636830 CCACCAGAAAGCGATCAAGAT 58.363 47.619 0.00 0.00 0.00 2.40
813 4774 1.339055 CCCACCAGAAAGCGATCAAGA 60.339 52.381 0.00 0.00 0.00 3.02
814 4775 1.089920 CCCACCAGAAAGCGATCAAG 58.910 55.000 0.00 0.00 0.00 3.02
815 4776 0.690192 TCCCACCAGAAAGCGATCAA 59.310 50.000 0.00 0.00 0.00 2.57
816 4777 0.250234 CTCCCACCAGAAAGCGATCA 59.750 55.000 0.00 0.00 0.00 2.92
817 4778 0.462759 CCTCCCACCAGAAAGCGATC 60.463 60.000 0.00 0.00 0.00 3.69
818 4779 1.604378 CCTCCCACCAGAAAGCGAT 59.396 57.895 0.00 0.00 0.00 4.58
819 4780 2.592993 CCCTCCCACCAGAAAGCGA 61.593 63.158 0.00 0.00 0.00 4.93
820 4781 2.045926 CCCTCCCACCAGAAAGCG 60.046 66.667 0.00 0.00 0.00 4.68
821 4782 0.322906 CTTCCCTCCCACCAGAAAGC 60.323 60.000 0.00 0.00 0.00 3.51
822 4783 0.329596 CCTTCCCTCCCACCAGAAAG 59.670 60.000 0.00 0.00 0.00 2.62
823 4784 1.140134 CCCTTCCCTCCCACCAGAAA 61.140 60.000 0.00 0.00 0.00 2.52
824 4785 1.541368 CCCTTCCCTCCCACCAGAA 60.541 63.158 0.00 0.00 0.00 3.02
825 4786 2.124996 CCCTTCCCTCCCACCAGA 59.875 66.667 0.00 0.00 0.00 3.86
826 4787 2.124996 TCCCTTCCCTCCCACCAG 59.875 66.667 0.00 0.00 0.00 4.00
827 4788 2.204090 GTCCCTTCCCTCCCACCA 60.204 66.667 0.00 0.00 0.00 4.17
828 4789 3.400054 CGTCCCTTCCCTCCCACC 61.400 72.222 0.00 0.00 0.00 4.61
829 4790 3.400054 CCGTCCCTTCCCTCCCAC 61.400 72.222 0.00 0.00 0.00 4.61
830 4791 2.109494 TAACCGTCCCTTCCCTCCCA 62.109 60.000 0.00 0.00 0.00 4.37
831 4792 1.306397 TAACCGTCCCTTCCCTCCC 60.306 63.158 0.00 0.00 0.00 4.30
832 4793 1.620739 GGTAACCGTCCCTTCCCTCC 61.621 65.000 0.00 0.00 0.00 4.30
833 4794 1.903294 GGTAACCGTCCCTTCCCTC 59.097 63.158 0.00 0.00 0.00 4.30
834 4795 1.986210 CGGTAACCGTCCCTTCCCT 60.986 63.158 0.00 0.00 42.73 4.20
835 4796 2.580815 CGGTAACCGTCCCTTCCC 59.419 66.667 0.00 0.00 42.73 3.97
836 4797 0.970427 TACCGGTAACCGTCCCTTCC 60.970 60.000 13.14 0.00 46.80 3.46
837 4798 0.173481 GTACCGGTAACCGTCCCTTC 59.827 60.000 17.78 0.00 46.80 3.46
838 4799 1.595093 CGTACCGGTAACCGTCCCTT 61.595 60.000 17.78 0.00 46.80 3.95
839 4800 2.046285 CGTACCGGTAACCGTCCCT 61.046 63.158 17.78 0.00 46.80 4.20
840 4801 2.489751 CGTACCGGTAACCGTCCC 59.510 66.667 17.78 0.45 46.80 4.46
841 4802 2.489751 CCGTACCGGTAACCGTCC 59.510 66.667 17.78 1.26 46.80 4.79
842 4803 1.591504 TTCCCGTACCGGTAACCGTC 61.592 60.000 17.78 2.08 46.80 4.79
843 4804 1.182385 TTTCCCGTACCGGTAACCGT 61.182 55.000 17.78 0.00 46.80 4.83
844 4805 0.735978 GTTTCCCGTACCGGTAACCG 60.736 60.000 17.78 16.52 46.80 4.44
845 4806 0.735978 CGTTTCCCGTACCGGTAACC 60.736 60.000 17.78 3.75 46.80 2.85
846 4807 1.351430 GCGTTTCCCGTACCGGTAAC 61.351 60.000 17.78 10.80 46.80 2.50
847 4808 1.080161 GCGTTTCCCGTACCGGTAA 60.080 57.895 17.78 0.00 46.80 2.85
848 4809 2.571231 GCGTTTCCCGTACCGGTA 59.429 61.111 11.16 11.16 46.80 4.02
849 4810 4.377708 GGCGTTTCCCGTACCGGT 62.378 66.667 13.98 13.98 46.80 5.28
857 4818 3.729698 CCCGTTTCGGCGTTTCCC 61.730 66.667 6.85 0.00 46.86 3.97
858 4819 2.665854 TCCCGTTTCGGCGTTTCC 60.666 61.111 6.85 0.00 46.86 3.13
859 4820 1.894223 GACTCCCGTTTCGGCGTTTC 61.894 60.000 6.85 0.00 46.86 2.78
860 4821 1.957695 GACTCCCGTTTCGGCGTTT 60.958 57.895 6.85 0.00 46.86 3.60
861 4822 2.356673 GACTCCCGTTTCGGCGTT 60.357 61.111 6.85 0.00 46.86 4.84
862 4823 4.368543 GGACTCCCGTTTCGGCGT 62.369 66.667 6.85 2.30 46.86 5.68
923 4884 6.346199 GCGATTCTTTCTTTCTTATAGAGGCG 60.346 42.308 0.00 0.00 0.00 5.52
929 4890 6.255020 GGTGACGCGATTCTTTCTTTCTTATA 59.745 38.462 15.93 0.00 0.00 0.98
930 4891 5.063564 GGTGACGCGATTCTTTCTTTCTTAT 59.936 40.000 15.93 0.00 0.00 1.73
931 4892 4.387862 GGTGACGCGATTCTTTCTTTCTTA 59.612 41.667 15.93 0.00 0.00 2.10
932 4893 3.186613 GGTGACGCGATTCTTTCTTTCTT 59.813 43.478 15.93 0.00 0.00 2.52
933 4894 2.737252 GGTGACGCGATTCTTTCTTTCT 59.263 45.455 15.93 0.00 0.00 2.52
934 4895 2.478894 TGGTGACGCGATTCTTTCTTTC 59.521 45.455 15.93 0.00 0.00 2.62
935 4896 2.223377 GTGGTGACGCGATTCTTTCTTT 59.777 45.455 15.93 0.00 0.00 2.52
949 4912 2.048127 GCAGGAGACCGTGGTGAC 60.048 66.667 0.00 0.00 0.00 3.67
950 4913 2.203640 AGCAGGAGACCGTGGTGA 60.204 61.111 0.00 0.00 37.48 4.02
1090 5053 2.290122 TAGAGGCTCTTGCTCTGCGC 62.290 60.000 24.13 0.00 39.59 6.09
1093 5056 1.098869 TCGTAGAGGCTCTTGCTCTG 58.901 55.000 24.13 6.67 39.59 3.35
1119 5082 1.455959 CTAGGGTCTGGACGGAGGG 60.456 68.421 0.00 0.00 0.00 4.30
1148 5111 1.557443 GATCAAACGCTATCGCCGGG 61.557 60.000 2.18 0.00 39.84 5.73
1155 5118 2.404215 CGGGATTCGATCAAACGCTAT 58.596 47.619 0.00 0.00 42.43 2.97
1174 5138 0.026285 GATTCCGAAACATCCGTGCG 59.974 55.000 0.00 0.00 0.00 5.34
1191 5155 3.206150 GCCATTACTGTTCATCCACGAT 58.794 45.455 0.00 0.00 0.00 3.73
1246 5214 1.122632 TAACAACGGACAGCCCTGGA 61.123 55.000 0.00 0.00 34.19 3.86
1369 5339 2.897969 GACTCCATATCTCGGGGCTAAA 59.102 50.000 0.00 0.00 0.00 1.85
1403 5373 9.840236 CCAGGTTTGTACATGCAGGTAACTAGT 62.840 44.444 13.58 0.00 39.07 2.57
1416 5386 6.313519 AGATATGTGTCCAGGTTTGTACAT 57.686 37.500 0.00 0.00 33.74 2.29
1421 5391 4.399303 GGGAAAGATATGTGTCCAGGTTTG 59.601 45.833 11.11 0.00 31.30 2.93
1465 5435 5.479027 TCACTAGGCTACTGTTATGTGTGAA 59.521 40.000 5.35 0.00 0.00 3.18
1466 5436 5.014202 TCACTAGGCTACTGTTATGTGTGA 58.986 41.667 7.44 5.79 0.00 3.58
1473 5443 2.165030 GCGGTTCACTAGGCTACTGTTA 59.835 50.000 0.00 0.00 0.00 2.41
1546 5516 0.621609 TGTGATCCTTTAACCCCGGG 59.378 55.000 15.80 15.80 0.00 5.73
1796 5766 7.554118 GTGAGGTCTGAATTCTGATCCATAAAA 59.446 37.037 18.84 6.20 0.00 1.52
1832 5802 8.682710 TGGGCATGAAACAGAAACTTTATATAC 58.317 33.333 0.00 0.00 0.00 1.47
1848 5818 4.219115 TCTTGGTTTAACTGGGCATGAAA 58.781 39.130 0.00 0.00 0.00 2.69
1893 5863 1.153353 GCAAGTACGGTGCAGCTTTA 58.847 50.000 14.92 2.09 41.80 1.85
1907 5877 4.828939 TGAGAAGAAACCATGAATGCAAGT 59.171 37.500 0.00 0.00 0.00 3.16
1963 5935 2.363306 ATCCACCAACTGACTGCAAA 57.637 45.000 0.00 0.00 0.00 3.68
2018 5990 7.221452 CAGCTCATCTGCATGTTTATTTAAACC 59.779 37.037 9.96 0.00 39.25 3.27
2038 6010 0.677731 GCATGTACCCTTGCAGCTCA 60.678 55.000 7.45 0.00 40.48 4.26
2069 6041 4.292306 AGACTTAACCCCATTTGAGGTCAT 59.708 41.667 0.00 0.00 34.45 3.06
2070 6042 3.655777 AGACTTAACCCCATTTGAGGTCA 59.344 43.478 0.00 0.00 34.45 4.02
2081 6053 5.880887 CCTGTAGAAATTCAGACTTAACCCC 59.119 44.000 0.00 0.00 34.02 4.95
2084 6056 9.356433 GTACTCCTGTAGAAATTCAGACTTAAC 57.644 37.037 0.00 0.00 34.02 2.01
2203 6175 4.130118 CTCAACCCCTAATATCTGCACAC 58.870 47.826 0.00 0.00 0.00 3.82
2205 6177 4.636249 CTCTCAACCCCTAATATCTGCAC 58.364 47.826 0.00 0.00 0.00 4.57
2323 6295 2.722094 ACTGCACAACAAAGGTTCAGA 58.278 42.857 0.00 0.00 34.21 3.27
2396 6368 1.687660 TGCAGCTGCTGGAATTTTTCA 59.312 42.857 36.61 13.97 42.66 2.69
2405 6377 2.033757 ACCTTCTGCAGCTGCTGG 59.966 61.111 35.85 30.79 42.66 4.85
2663 6635 4.349663 TGTATAAGCAAATGGACAACGC 57.650 40.909 0.00 0.00 0.00 4.84
2669 6641 6.712179 TCATGCATTGTATAAGCAAATGGA 57.288 33.333 0.00 0.00 42.15 3.41
2730 6702 5.243283 AGCTTCAAATTCTTCAATGTCAGCT 59.757 36.000 0.00 0.00 0.00 4.24
3095 7070 3.323691 TCAAGCACTTTACTAGCACCTCA 59.676 43.478 0.00 0.00 0.00 3.86
3150 7125 7.355778 GGTAAGATAATTGCACATACAGAAGC 58.644 38.462 0.00 0.00 0.00 3.86
3161 7136 5.353394 AAGGAGACGGTAAGATAATTGCA 57.647 39.130 0.00 0.00 0.00 4.08
3239 7214 2.040178 GTGGGTGGTTCTATCTCGGAT 58.960 52.381 0.00 0.00 0.00 4.18
3242 7217 3.000727 GTTTGTGGGTGGTTCTATCTCG 58.999 50.000 0.00 0.00 0.00 4.04
3291 7266 6.808321 TTGACAGATAAATGCTAGTAGGGT 57.192 37.500 0.00 0.00 0.00 4.34
3309 7284 3.066621 GGAGTGAAGTGTTTGCATTGACA 59.933 43.478 0.00 0.00 0.00 3.58
3310 7285 3.066621 TGGAGTGAAGTGTTTGCATTGAC 59.933 43.478 0.00 0.00 0.00 3.18
3313 7288 3.290710 ACTGGAGTGAAGTGTTTGCATT 58.709 40.909 0.00 0.00 0.00 3.56
3314 7289 2.936202 ACTGGAGTGAAGTGTTTGCAT 58.064 42.857 0.00 0.00 0.00 3.96
3316 7291 3.128589 TCAAACTGGAGTGAAGTGTTTGC 59.871 43.478 10.77 0.00 43.86 3.68
3317 7292 4.963276 TCAAACTGGAGTGAAGTGTTTG 57.037 40.909 9.69 9.69 44.86 2.93
3376 7351 3.378427 GGAGACAAAACAGTGCAGACTTT 59.622 43.478 0.00 0.00 0.00 2.66
3584 7559 1.630244 CCTTGGCACGCTTCTTCTCG 61.630 60.000 0.00 0.00 0.00 4.04
3637 7612 1.218316 CGACCAAGGTAGCCTGACC 59.782 63.158 0.00 0.00 40.08 4.02
3638 7613 0.108756 GACGACCAAGGTAGCCTGAC 60.109 60.000 0.00 0.00 32.13 3.51
3639 7614 0.541063 TGACGACCAAGGTAGCCTGA 60.541 55.000 0.00 0.00 32.13 3.86
3640 7615 0.108615 CTGACGACCAAGGTAGCCTG 60.109 60.000 0.00 0.00 32.13 4.85
3641 7616 1.258445 CCTGACGACCAAGGTAGCCT 61.258 60.000 0.00 0.00 33.87 4.58
3643 7618 1.448013 GCCTGACGACCAAGGTAGC 60.448 63.158 0.00 0.00 0.00 3.58
3644 7619 1.218316 GGCCTGACGACCAAGGTAG 59.782 63.158 0.00 0.00 0.00 3.18
3645 7620 2.288025 GGGCCTGACGACCAAGGTA 61.288 63.158 0.84 0.00 0.00 3.08
3646 7621 3.637273 GGGCCTGACGACCAAGGT 61.637 66.667 0.84 0.00 0.00 3.50
3647 7622 2.804828 GAAGGGCCTGACGACCAAGG 62.805 65.000 6.92 0.00 0.00 3.61
3648 7623 1.376037 GAAGGGCCTGACGACCAAG 60.376 63.158 6.92 0.00 0.00 3.61
3649 7624 2.747686 GAAGGGCCTGACGACCAA 59.252 61.111 6.92 0.00 0.00 3.67
3651 7626 3.358076 CTCGAAGGGCCTGACGACC 62.358 68.421 24.95 4.61 0.00 4.79
3652 7627 1.874345 TTCTCGAAGGGCCTGACGAC 61.874 60.000 24.95 8.04 0.00 4.34
3654 7629 0.320421 TTTTCTCGAAGGGCCTGACG 60.320 55.000 21.85 21.85 0.00 4.35
3655 7630 1.892209 TTTTTCTCGAAGGGCCTGAC 58.108 50.000 6.92 3.52 0.00 3.51
3704 7687 3.318017 GACACTAGAGTTGCGACACAAT 58.682 45.455 6.90 0.00 41.27 2.71
3785 7768 3.003689 CACTTCCACAGTTGTTCACATCC 59.996 47.826 0.00 0.00 30.92 3.51
3976 7960 7.786046 TGAGGAAGAAAATAGTAGTACCACA 57.214 36.000 0.00 0.00 0.00 4.17
4082 8081 8.579850 AGTACCAGCTTGATTAATCAAAATCA 57.420 30.769 26.57 9.04 45.26 2.57
4113 8112 9.696572 ACTGTCTAAGATAAACTGGATACTACA 57.303 33.333 0.00 0.00 37.61 2.74
4122 8121 8.376203 CAACATCGAACTGTCTAAGATAAACTG 58.624 37.037 0.00 0.00 0.00 3.16
4124 8123 8.462143 TCAACATCGAACTGTCTAAGATAAAC 57.538 34.615 0.00 0.00 0.00 2.01
4136 8135 5.845985 AACACTACATCAACATCGAACTG 57.154 39.130 0.00 0.00 0.00 3.16
4167 8166 9.784531 CATAGAATCATAAACAGTCCATTACCT 57.215 33.333 0.00 0.00 0.00 3.08
4185 8184 8.311650 ACCGAATTAACAGCATACATAGAATC 57.688 34.615 0.00 0.00 0.00 2.52
4188 8187 7.380333 CGTTACCGAATTAACAGCATACATAGA 59.620 37.037 0.00 0.00 35.63 1.98
4207 8206 9.653067 TCATTGCATAATTAAATAACGTTACCG 57.347 29.630 10.81 0.00 40.83 4.02
4258 8257 7.873719 TTTTCTTGCGGGATGATAAAGAATA 57.126 32.000 0.00 0.00 36.89 1.75
4317 8316 9.632638 TTTCATAAACAAAATGATCCCCAAAAA 57.367 25.926 0.00 0.00 33.52 1.94
4318 8317 9.061435 GTTTCATAAACAAAATGATCCCCAAAA 57.939 29.630 0.00 0.00 41.04 2.44
4319 8318 8.614469 GTTTCATAAACAAAATGATCCCCAAA 57.386 30.769 0.00 0.00 41.04 3.28
4332 8331 6.898074 GCGCCATCGGTGTTTCATAAACAA 62.898 45.833 6.78 0.00 43.44 2.83
4333 8332 5.502254 GCGCCATCGGTGTTTCATAAACA 62.502 47.826 0.00 1.21 41.51 2.83
4334 8333 2.780993 CGCCATCGGTGTTTCATAAAC 58.219 47.619 0.00 0.00 41.73 2.01
4335 8334 1.131504 GCGCCATCGGTGTTTCATAAA 59.868 47.619 0.00 0.00 35.34 1.40
4336 8335 0.730265 GCGCCATCGGTGTTTCATAA 59.270 50.000 0.00 0.00 35.34 1.90
4337 8336 0.391793 TGCGCCATCGGTGTTTCATA 60.392 50.000 4.18 0.00 35.34 2.15
4338 8337 1.647545 CTGCGCCATCGGTGTTTCAT 61.648 55.000 4.18 0.00 35.34 2.57
4339 8338 2.281139 TGCGCCATCGGTGTTTCA 60.281 55.556 4.18 0.00 35.34 2.69
4340 8339 2.480555 CTGCGCCATCGGTGTTTC 59.519 61.111 4.18 0.00 35.34 2.78
4341 8340 3.737172 GCTGCGCCATCGGTGTTT 61.737 61.111 4.18 0.00 35.34 2.83
4342 8341 4.704833 AGCTGCGCCATCGGTGTT 62.705 61.111 4.18 0.00 35.34 3.32
4343 8342 4.704833 AAGCTGCGCCATCGGTGT 62.705 61.111 4.18 0.00 35.34 4.16
4344 8343 2.855728 GAAAAGCTGCGCCATCGGTG 62.856 60.000 4.18 0.00 36.10 4.94
4345 8344 2.672996 AAAAGCTGCGCCATCGGT 60.673 55.556 4.18 0.00 35.95 4.69
4346 8345 1.996786 ATGAAAAGCTGCGCCATCGG 61.997 55.000 4.18 0.00 35.95 4.18
4347 8346 0.179156 AATGAAAAGCTGCGCCATCG 60.179 50.000 4.18 0.00 39.07 3.84
4348 8347 1.922545 GAAATGAAAAGCTGCGCCATC 59.077 47.619 4.18 0.00 0.00 3.51
4349 8348 1.273048 TGAAATGAAAAGCTGCGCCAT 59.727 42.857 4.18 0.00 0.00 4.40
4350 8349 0.672889 TGAAATGAAAAGCTGCGCCA 59.327 45.000 4.18 0.00 0.00 5.69
4351 8350 1.782044 TTGAAATGAAAAGCTGCGCC 58.218 45.000 4.18 0.00 0.00 6.53
4352 8351 2.988493 TCATTGAAATGAAAAGCTGCGC 59.012 40.909 0.00 0.00 42.11 6.09
4353 8352 4.478699 TCTCATTGAAATGAAAAGCTGCG 58.521 39.130 7.13 0.00 44.20 5.18
4354 8353 4.863131 CCTCTCATTGAAATGAAAAGCTGC 59.137 41.667 7.13 0.00 44.20 5.25
4355 8354 6.072064 ACTCCTCTCATTGAAATGAAAAGCTG 60.072 38.462 7.13 5.94 44.20 4.24
4356 8355 6.008960 ACTCCTCTCATTGAAATGAAAAGCT 58.991 36.000 7.13 0.00 44.20 3.74
4357 8356 6.264841 ACTCCTCTCATTGAAATGAAAAGC 57.735 37.500 7.13 0.00 44.20 3.51
4358 8357 8.108551 AGAACTCCTCTCATTGAAATGAAAAG 57.891 34.615 7.13 7.40 44.20 2.27
4359 8358 9.003658 GTAGAACTCCTCTCATTGAAATGAAAA 57.996 33.333 7.13 0.00 44.20 2.29
4360 8359 8.156820 TGTAGAACTCCTCTCATTGAAATGAAA 58.843 33.333 7.13 0.00 44.20 2.69
4361 8360 7.679783 TGTAGAACTCCTCTCATTGAAATGAA 58.320 34.615 7.13 0.00 44.20 2.57
4362 8361 7.244886 TGTAGAACTCCTCTCATTGAAATGA 57.755 36.000 5.65 5.65 42.78 2.57
4363 8362 9.605275 TTATGTAGAACTCCTCTCATTGAAATG 57.395 33.333 0.00 0.00 35.41 2.32
4366 8365 9.436957 GTTTTATGTAGAACTCCTCTCATTGAA 57.563 33.333 0.00 0.00 35.41 2.69
4367 8366 8.816894 AGTTTTATGTAGAACTCCTCTCATTGA 58.183 33.333 0.00 0.00 35.41 2.57
4370 8369 9.482175 AGTAGTTTTATGTAGAACTCCTCTCAT 57.518 33.333 0.00 0.00 37.32 2.90
4371 8370 8.880991 AGTAGTTTTATGTAGAACTCCTCTCA 57.119 34.615 0.00 0.00 37.32 3.27
4372 8371 8.407832 GGAGTAGTTTTATGTAGAACTCCTCTC 58.592 40.741 10.59 11.56 45.20 3.20
4373 8372 7.342541 GGGAGTAGTTTTATGTAGAACTCCTCT 59.657 40.741 15.90 0.00 46.91 3.69
4374 8373 7.342541 AGGGAGTAGTTTTATGTAGAACTCCTC 59.657 40.741 15.90 7.21 46.91 3.71
4375 8374 7.190501 AGGGAGTAGTTTTATGTAGAACTCCT 58.809 38.462 15.90 0.00 46.91 3.69
4376 8375 7.421087 AGGGAGTAGTTTTATGTAGAACTCC 57.579 40.000 9.59 9.59 46.99 3.85
4377 8376 9.152595 CAAAGGGAGTAGTTTTATGTAGAACTC 57.847 37.037 0.00 0.00 37.32 3.01
4378 8377 8.657712 ACAAAGGGAGTAGTTTTATGTAGAACT 58.342 33.333 2.18 2.18 39.32 3.01
4379 8378 8.843885 ACAAAGGGAGTAGTTTTATGTAGAAC 57.156 34.615 0.00 0.00 0.00 3.01
4380 8379 9.856162 AAACAAAGGGAGTAGTTTTATGTAGAA 57.144 29.630 0.00 0.00 30.64 2.10
4381 8380 9.498176 GAAACAAAGGGAGTAGTTTTATGTAGA 57.502 33.333 0.00 0.00 34.62 2.59
4382 8381 9.280174 TGAAACAAAGGGAGTAGTTTTATGTAG 57.720 33.333 0.00 0.00 34.62 2.74
4383 8382 9.802039 ATGAAACAAAGGGAGTAGTTTTATGTA 57.198 29.630 0.00 0.00 34.62 2.29
4384 8383 8.706322 ATGAAACAAAGGGAGTAGTTTTATGT 57.294 30.769 0.00 0.00 34.62 2.29
4388 8387 9.143155 ACATAATGAAACAAAGGGAGTAGTTTT 57.857 29.630 0.00 0.00 34.62 2.43
4389 8388 8.706322 ACATAATGAAACAAAGGGAGTAGTTT 57.294 30.769 0.00 0.00 36.94 2.66
4390 8389 9.802039 TTACATAATGAAACAAAGGGAGTAGTT 57.198 29.630 0.00 0.00 0.00 2.24
4391 8390 9.449719 CTTACATAATGAAACAAAGGGAGTAGT 57.550 33.333 0.00 0.00 0.00 2.73
4392 8391 9.667107 TCTTACATAATGAAACAAAGGGAGTAG 57.333 33.333 0.00 0.00 0.00 2.57
4393 8392 9.444600 GTCTTACATAATGAAACAAAGGGAGTA 57.555 33.333 0.00 0.00 0.00 2.59
4394 8393 7.942341 TGTCTTACATAATGAAACAAAGGGAGT 59.058 33.333 0.00 0.00 0.00 3.85
4395 8394 8.335532 TGTCTTACATAATGAAACAAAGGGAG 57.664 34.615 0.00 0.00 0.00 4.30
4396 8395 8.160765 TCTGTCTTACATAATGAAACAAAGGGA 58.839 33.333 0.00 0.00 0.00 4.20
4397 8396 8.237267 GTCTGTCTTACATAATGAAACAAAGGG 58.763 37.037 0.00 0.00 0.00 3.95
4398 8397 7.957484 CGTCTGTCTTACATAATGAAACAAAGG 59.043 37.037 0.00 0.00 0.00 3.11
4399 8398 8.495949 ACGTCTGTCTTACATAATGAAACAAAG 58.504 33.333 0.00 0.00 0.00 2.77
4400 8399 8.373048 ACGTCTGTCTTACATAATGAAACAAA 57.627 30.769 0.00 0.00 0.00 2.83
4401 8400 7.956420 ACGTCTGTCTTACATAATGAAACAA 57.044 32.000 0.00 0.00 0.00 2.83
4402 8401 7.576750 GACGTCTGTCTTACATAATGAAACA 57.423 36.000 8.70 0.00 42.08 2.83
4417 8416 3.192844 TCCCAGAATGTAAGACGTCTGTC 59.807 47.826 20.85 15.30 45.86 3.51
4418 8417 3.056749 GTCCCAGAATGTAAGACGTCTGT 60.057 47.826 20.85 11.80 33.50 3.41
4419 8418 3.056821 TGTCCCAGAATGTAAGACGTCTG 60.057 47.826 20.85 4.41 34.50 3.51
4420 8419 3.162666 TGTCCCAGAATGTAAGACGTCT 58.837 45.455 13.58 13.58 33.15 4.18
4421 8420 3.192844 TCTGTCCCAGAATGTAAGACGTC 59.807 47.826 7.70 7.70 37.57 4.34
4422 8421 3.162666 TCTGTCCCAGAATGTAAGACGT 58.837 45.455 0.00 0.00 37.57 4.34
4423 8422 3.429547 CCTCTGTCCCAGAATGTAAGACG 60.430 52.174 0.00 0.00 40.18 4.18
4424 8423 3.118592 CCCTCTGTCCCAGAATGTAAGAC 60.119 52.174 0.00 0.00 40.18 3.01
4425 8424 3.107601 CCCTCTGTCCCAGAATGTAAGA 58.892 50.000 0.00 0.00 40.18 2.10
4426 8425 3.107601 TCCCTCTGTCCCAGAATGTAAG 58.892 50.000 0.00 0.00 40.18 2.34
4427 8426 3.107601 CTCCCTCTGTCCCAGAATGTAA 58.892 50.000 0.00 0.00 40.18 2.41
4428 8427 2.044492 ACTCCCTCTGTCCCAGAATGTA 59.956 50.000 0.00 0.00 40.18 2.29
4429 8428 1.203364 ACTCCCTCTGTCCCAGAATGT 60.203 52.381 0.00 0.00 40.18 2.71
4430 8429 1.577736 ACTCCCTCTGTCCCAGAATG 58.422 55.000 0.00 0.00 40.18 2.67
4431 8430 2.587777 TCTACTCCCTCTGTCCCAGAAT 59.412 50.000 0.00 0.00 40.18 2.40
4432 8431 2.000803 TCTACTCCCTCTGTCCCAGAA 58.999 52.381 0.00 0.00 40.18 3.02
4433 8432 1.566703 CTCTACTCCCTCTGTCCCAGA 59.433 57.143 0.00 0.00 38.25 3.86
4434 8433 1.286553 ACTCTACTCCCTCTGTCCCAG 59.713 57.143 0.00 0.00 0.00 4.45
4435 8434 1.383963 ACTCTACTCCCTCTGTCCCA 58.616 55.000 0.00 0.00 0.00 4.37
4436 8435 3.887916 ATACTCTACTCCCTCTGTCCC 57.112 52.381 0.00 0.00 0.00 4.46
4437 8436 5.829062 TCTATACTCTACTCCCTCTGTCC 57.171 47.826 0.00 0.00 0.00 4.02
4438 8437 7.055378 TGTTTCTATACTCTACTCCCTCTGTC 58.945 42.308 0.00 0.00 0.00 3.51
4439 8438 6.971340 TGTTTCTATACTCTACTCCCTCTGT 58.029 40.000 0.00 0.00 0.00 3.41
4440 8439 7.339721 TGTTGTTTCTATACTCTACTCCCTCTG 59.660 40.741 0.00 0.00 0.00 3.35
4441 8440 7.411808 TGTTGTTTCTATACTCTACTCCCTCT 58.588 38.462 0.00 0.00 0.00 3.69
4442 8441 7.642082 TGTTGTTTCTATACTCTACTCCCTC 57.358 40.000 0.00 0.00 0.00 4.30
4443 8442 7.453752 TGTTGTTGTTTCTATACTCTACTCCCT 59.546 37.037 0.00 0.00 0.00 4.20
4444 8443 7.609056 TGTTGTTGTTTCTATACTCTACTCCC 58.391 38.462 0.00 0.00 0.00 4.30
4445 8444 8.923683 GTTGTTGTTGTTTCTATACTCTACTCC 58.076 37.037 0.00 0.00 0.00 3.85
4446 8445 9.472361 TGTTGTTGTTGTTTCTATACTCTACTC 57.528 33.333 0.00 0.00 0.00 2.59
4447 8446 9.826574 TTGTTGTTGTTGTTTCTATACTCTACT 57.173 29.630 0.00 0.00 0.00 2.57
4455 8454 8.698854 CGCAATAATTGTTGTTGTTGTTTCTAT 58.301 29.630 15.30 0.00 34.08 1.98
4456 8455 7.306283 GCGCAATAATTGTTGTTGTTGTTTCTA 60.306 33.333 15.30 0.00 34.08 2.10
4457 8456 6.509358 GCGCAATAATTGTTGTTGTTGTTTCT 60.509 34.615 15.30 0.00 34.08 2.52
4458 8457 5.615181 GCGCAATAATTGTTGTTGTTGTTTC 59.385 36.000 15.30 0.00 34.08 2.78
4459 8458 5.293079 AGCGCAATAATTGTTGTTGTTGTTT 59.707 32.000 11.47 0.00 34.08 2.83
4460 8459 4.808364 AGCGCAATAATTGTTGTTGTTGTT 59.192 33.333 11.47 0.00 34.08 2.83
4461 8460 4.208873 CAGCGCAATAATTGTTGTTGTTGT 59.791 37.500 11.47 0.00 34.08 3.32
4462 8461 4.690096 CAGCGCAATAATTGTTGTTGTTG 58.310 39.130 11.47 12.23 34.66 3.33
4463 8462 3.184178 GCAGCGCAATAATTGTTGTTGTT 59.816 39.130 11.47 5.16 34.66 2.83
4464 8463 2.730928 GCAGCGCAATAATTGTTGTTGT 59.269 40.909 11.47 0.00 34.66 3.32
4465 8464 2.730404 TGCAGCGCAATAATTGTTGTTG 59.270 40.909 11.47 12.20 34.76 3.33
4466 8465 3.023946 TGCAGCGCAATAATTGTTGTT 57.976 38.095 11.47 0.95 34.76 2.83
4467 8466 2.721274 TGCAGCGCAATAATTGTTGT 57.279 40.000 11.47 0.00 34.76 3.32
4478 8477 0.318022 CTGATGTTGTTTGCAGCGCA 60.318 50.000 11.47 0.00 36.47 6.09
4479 8478 1.611592 GCTGATGTTGTTTGCAGCGC 61.612 55.000 0.00 0.00 43.43 5.92
4480 8479 2.427360 GCTGATGTTGTTTGCAGCG 58.573 52.632 0.00 0.00 43.43 5.18
4483 8482 3.291809 CATCTGCTGATGTTGTTTGCA 57.708 42.857 21.80 0.00 43.68 4.08
4493 8492 2.770232 TGATCACCTCACATCTGCTGAT 59.230 45.455 0.00 0.00 0.00 2.90
4494 8493 2.181975 TGATCACCTCACATCTGCTGA 58.818 47.619 0.00 0.00 0.00 4.26
4495 8494 2.685850 TGATCACCTCACATCTGCTG 57.314 50.000 0.00 0.00 0.00 4.41
4496 8495 3.433314 GGAATGATCACCTCACATCTGCT 60.433 47.826 0.00 0.00 36.48 4.24
4497 8496 2.877168 GGAATGATCACCTCACATCTGC 59.123 50.000 0.00 0.00 36.48 4.26
4498 8497 3.129109 CGGAATGATCACCTCACATCTG 58.871 50.000 0.00 0.00 36.48 2.90
4499 8498 3.033909 TCGGAATGATCACCTCACATCT 58.966 45.455 0.00 0.00 36.48 2.90
4500 8499 3.126831 GTCGGAATGATCACCTCACATC 58.873 50.000 0.00 0.00 36.48 3.06
4501 8500 2.768527 AGTCGGAATGATCACCTCACAT 59.231 45.455 0.00 0.00 36.48 3.21
4502 8501 2.166459 GAGTCGGAATGATCACCTCACA 59.834 50.000 0.00 0.00 36.48 3.58
4503 8502 2.428890 AGAGTCGGAATGATCACCTCAC 59.571 50.000 0.00 0.00 36.48 3.51
4504 8503 2.739943 AGAGTCGGAATGATCACCTCA 58.260 47.619 0.00 0.00 38.53 3.86
4505 8504 3.886505 ACTAGAGTCGGAATGATCACCTC 59.113 47.826 0.00 0.00 0.00 3.85
4506 8505 3.634448 CACTAGAGTCGGAATGATCACCT 59.366 47.826 0.00 0.00 0.00 4.00
4507 8506 3.243569 CCACTAGAGTCGGAATGATCACC 60.244 52.174 0.00 0.00 0.00 4.02
4508 8507 3.381908 ACCACTAGAGTCGGAATGATCAC 59.618 47.826 0.00 0.00 0.00 3.06
4509 8508 3.632333 ACCACTAGAGTCGGAATGATCA 58.368 45.455 0.00 0.00 0.00 2.92
4510 8509 4.231718 GACCACTAGAGTCGGAATGATC 57.768 50.000 0.00 0.00 0.00 2.92
4519 8518 0.736053 CCAGAGCGACCACTAGAGTC 59.264 60.000 0.00 1.99 0.00 3.36
4520 8519 0.038455 ACCAGAGCGACCACTAGAGT 59.962 55.000 0.00 0.00 0.00 3.24
4521 8520 0.453793 CACCAGAGCGACCACTAGAG 59.546 60.000 0.00 0.00 0.00 2.43
4522 8521 0.965866 CCACCAGAGCGACCACTAGA 60.966 60.000 0.00 0.00 0.00 2.43
4523 8522 1.513158 CCACCAGAGCGACCACTAG 59.487 63.158 0.00 0.00 0.00 2.57
4524 8523 1.982395 CCCACCAGAGCGACCACTA 60.982 63.158 0.00 0.00 0.00 2.74
4525 8524 3.314331 CCCACCAGAGCGACCACT 61.314 66.667 0.00 0.00 0.00 4.00
4526 8525 4.394712 CCCCACCAGAGCGACCAC 62.395 72.222 0.00 0.00 0.00 4.16
4527 8526 4.631740 TCCCCACCAGAGCGACCA 62.632 66.667 0.00 0.00 0.00 4.02
4528 8527 4.083862 GTCCCCACCAGAGCGACC 62.084 72.222 0.00 0.00 0.00 4.79
4529 8528 2.660064 ATGTCCCCACCAGAGCGAC 61.660 63.158 0.00 0.00 0.00 5.19
4530 8529 2.284625 ATGTCCCCACCAGAGCGA 60.285 61.111 0.00 0.00 0.00 4.93
4531 8530 1.976132 ATCATGTCCCCACCAGAGCG 61.976 60.000 0.00 0.00 0.00 5.03
4532 8531 0.179034 GATCATGTCCCCACCAGAGC 60.179 60.000 0.00 0.00 0.00 4.09
4533 8532 1.504912 AGATCATGTCCCCACCAGAG 58.495 55.000 0.00 0.00 0.00 3.35
4534 8533 1.561076 CAAGATCATGTCCCCACCAGA 59.439 52.381 0.00 0.00 0.00 3.86
4535 8534 2.020694 GCAAGATCATGTCCCCACCAG 61.021 57.143 0.00 0.00 0.00 4.00
4536 8535 0.034186 GCAAGATCATGTCCCCACCA 60.034 55.000 0.00 0.00 0.00 4.17
4537 8536 1.097547 CGCAAGATCATGTCCCCACC 61.098 60.000 0.00 0.00 43.02 4.61
4538 8537 1.097547 CCGCAAGATCATGTCCCCAC 61.098 60.000 0.00 0.00 43.02 4.61
4539 8538 1.224315 CCGCAAGATCATGTCCCCA 59.776 57.895 0.00 0.00 43.02 4.96
4540 8539 2.189499 GCCGCAAGATCATGTCCCC 61.189 63.158 0.00 0.00 43.02 4.81
4541 8540 2.537560 CGCCGCAAGATCATGTCCC 61.538 63.158 0.00 0.00 43.02 4.46
4542 8541 1.521457 TCGCCGCAAGATCATGTCC 60.521 57.895 0.00 0.00 43.02 4.02
4543 8542 0.807667 AGTCGCCGCAAGATCATGTC 60.808 55.000 0.00 0.00 43.02 3.06
4544 8543 0.807667 GAGTCGCCGCAAGATCATGT 60.808 55.000 0.00 0.00 43.02 3.21
4545 8544 1.815212 CGAGTCGCCGCAAGATCATG 61.815 60.000 0.00 0.00 43.02 3.07
4546 8545 1.589993 CGAGTCGCCGCAAGATCAT 60.590 57.895 0.00 0.00 43.02 2.45
4547 8546 2.202610 CGAGTCGCCGCAAGATCA 60.203 61.111 0.00 0.00 43.02 2.92
4558 8557 2.521958 ATTTGGTCCCAGGCGAGTCG 62.522 60.000 8.54 8.54 0.00 4.18
4559 8558 0.744771 GATTTGGTCCCAGGCGAGTC 60.745 60.000 0.00 0.00 0.00 3.36
4560 8559 1.299976 GATTTGGTCCCAGGCGAGT 59.700 57.895 0.00 0.00 0.00 4.18
4561 8560 0.322456 TTGATTTGGTCCCAGGCGAG 60.322 55.000 0.00 0.00 0.00 5.03
4562 8561 0.331278 ATTGATTTGGTCCCAGGCGA 59.669 50.000 0.00 0.00 0.00 5.54
4563 8562 1.676006 GTATTGATTTGGTCCCAGGCG 59.324 52.381 0.00 0.00 0.00 5.52
4564 8563 3.018423 AGTATTGATTTGGTCCCAGGC 57.982 47.619 0.00 0.00 0.00 4.85
4565 8564 4.599041 TGAAGTATTGATTTGGTCCCAGG 58.401 43.478 0.00 0.00 0.00 4.45
4566 8565 5.887598 TGATGAAGTATTGATTTGGTCCCAG 59.112 40.000 0.00 0.00 0.00 4.45
4567 8566 5.825532 TGATGAAGTATTGATTTGGTCCCA 58.174 37.500 0.00 0.00 0.00 4.37
4568 8567 6.736794 GCATGATGAAGTATTGATTTGGTCCC 60.737 42.308 0.00 0.00 0.00 4.46
4569 8568 6.183360 TGCATGATGAAGTATTGATTTGGTCC 60.183 38.462 0.00 0.00 0.00 4.46
4570 8569 6.798482 TGCATGATGAAGTATTGATTTGGTC 58.202 36.000 0.00 0.00 0.00 4.02
4571 8570 6.778834 TGCATGATGAAGTATTGATTTGGT 57.221 33.333 0.00 0.00 0.00 3.67
4572 8571 7.923878 TCAATGCATGATGAAGTATTGATTTGG 59.076 33.333 0.00 0.00 40.35 3.28
4573 8572 8.865590 TCAATGCATGATGAAGTATTGATTTG 57.134 30.769 0.00 0.00 40.35 2.32
4574 8573 8.692710 ACTCAATGCATGATGAAGTATTGATTT 58.307 29.630 0.00 0.00 42.87 2.17
4575 8574 8.234136 ACTCAATGCATGATGAAGTATTGATT 57.766 30.769 0.00 0.00 42.87 2.57
4576 8575 7.818997 ACTCAATGCATGATGAAGTATTGAT 57.181 32.000 0.00 0.00 42.87 2.57
4577 8576 7.337436 TCAACTCAATGCATGATGAAGTATTGA 59.663 33.333 0.00 6.48 42.06 2.57
4578 8577 7.477494 TCAACTCAATGCATGATGAAGTATTG 58.523 34.615 0.00 4.38 38.61 1.90
4579 8578 7.634671 TCAACTCAATGCATGATGAAGTATT 57.365 32.000 0.00 0.00 37.44 1.89
4580 8579 7.634671 TTCAACTCAATGCATGATGAAGTAT 57.365 32.000 0.00 0.00 33.96 2.12
4581 8580 7.201758 GGATTCAACTCAATGCATGATGAAGTA 60.202 37.037 0.00 0.00 39.29 2.24
4582 8581 5.970317 TTCAACTCAATGCATGATGAAGT 57.030 34.783 0.00 0.00 33.96 3.01
4583 8582 5.977725 GGATTCAACTCAATGCATGATGAAG 59.022 40.000 0.00 0.00 39.29 3.02
4584 8583 5.419471 TGGATTCAACTCAATGCATGATGAA 59.581 36.000 0.00 5.32 39.88 2.57
4585 8584 4.951094 TGGATTCAACTCAATGCATGATGA 59.049 37.500 0.00 0.00 37.44 2.92
4586 8585 5.257082 TGGATTCAACTCAATGCATGATG 57.743 39.130 0.00 0.00 37.44 3.07
4587 8586 6.479972 AATGGATTCAACTCAATGCATGAT 57.520 33.333 0.00 0.00 42.24 2.45
4588 8587 5.925506 AATGGATTCAACTCAATGCATGA 57.074 34.783 0.00 0.00 42.24 3.07
4589 8588 8.072238 CAATAATGGATTCAACTCAATGCATG 57.928 34.615 0.00 0.00 42.24 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.