Multiple sequence alignment - TraesCS6B01G190600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G190600 chr6B 100.000 4463 0 0 1 4463 223445193 223440731 0.000000e+00 8242.0
1 TraesCS6B01G190600 chr6B 96.250 80 2 1 4384 4463 446792836 446792914 3.620000e-26 130.0
2 TraesCS6B01G190600 chr6A 91.130 1894 88 25 2014 3848 155254134 155256006 0.000000e+00 2494.0
3 TraesCS6B01G190600 chr6A 88.728 1801 88 38 264 2015 155252273 155254007 0.000000e+00 2095.0
4 TraesCS6B01G190600 chr6A 90.041 241 22 2 1 239 155251430 155251670 1.210000e-80 311.0
5 TraesCS6B01G190600 chr6A 94.318 88 4 1 4376 4463 337210719 337210805 2.800000e-27 134.0
6 TraesCS6B01G190600 chr6A 95.122 82 3 1 4382 4463 539691756 539691676 1.300000e-25 128.0
7 TraesCS6B01G190600 chr6D 88.389 2067 115 47 1 2015 125241767 125239774 0.000000e+00 2372.0
8 TraesCS6B01G190600 chr6D 90.864 1620 90 18 2014 3588 125239647 125238041 0.000000e+00 2119.0
9 TraesCS6B01G190600 chr6D 86.966 468 32 19 3939 4383 125235081 125234620 2.400000e-137 499.0
10 TraesCS6B01G190600 chr6D 88.949 371 10 8 3586 3943 125236322 125235970 3.190000e-116 429.0
11 TraesCS6B01G190600 chr6D 79.918 244 43 5 4139 4380 467169520 467169281 1.650000e-39 174.0
12 TraesCS6B01G190600 chr5B 87.047 193 23 2 4188 4380 527147166 527147356 2.700000e-52 217.0
13 TraesCS6B01G190600 chr5B 95.122 82 3 1 4382 4463 19529733 19529653 1.300000e-25 128.0
14 TraesCS6B01G190600 chr1B 84.615 195 28 2 4188 4381 213916629 213916822 4.560000e-45 193.0
15 TraesCS6B01G190600 chr1B 92.500 40 2 1 3680 3718 114464371 114464332 6.240000e-04 56.5
16 TraesCS6B01G190600 chr3B 81.048 248 40 7 4139 4381 312157626 312157871 1.640000e-44 191.0
17 TraesCS6B01G190600 chr3B 80.162 247 40 8 4139 4380 558520082 558520324 4.590000e-40 176.0
18 TraesCS6B01G190600 chr3B 100.000 28 0 0 3679 3706 483569257 483569230 8.000000e-03 52.8
19 TraesCS6B01G190600 chr3B 100.000 28 0 0 3679 3706 483970161 483970134 8.000000e-03 52.8
20 TraesCS6B01G190600 chr7A 81.959 194 35 0 4188 4381 34931846 34932039 9.930000e-37 165.0
21 TraesCS6B01G190600 chr3A 82.353 187 33 0 4195 4381 713767653 713767467 3.570000e-36 163.0
22 TraesCS6B01G190600 chr7D 78.543 247 40 11 4139 4380 178995139 178995377 2.780000e-32 150.0
23 TraesCS6B01G190600 chr5A 94.186 86 4 1 4379 4463 395321455 395321540 3.620000e-26 130.0
24 TraesCS6B01G190600 chr4B 92.391 92 5 2 4372 4463 504279373 504279462 3.620000e-26 130.0
25 TraesCS6B01G190600 chr4B 94.048 84 5 0 4380 4463 454931367 454931450 1.300000e-25 128.0
26 TraesCS6B01G190600 chr3D 95.181 83 3 1 4382 4463 313776098 313776016 3.620000e-26 130.0
27 TraesCS6B01G190600 chr1D 92.135 89 6 1 4375 4463 449839223 449839310 1.690000e-24 124.0
28 TraesCS6B01G190600 chr4D 94.737 38 2 0 3679 3716 3529904 3529941 4.820000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G190600 chr6B 223440731 223445193 4462 True 8242.000000 8242 100.000000 1 4463 1 chr6B.!!$R1 4462
1 TraesCS6B01G190600 chr6A 155251430 155256006 4576 False 1633.333333 2494 89.966333 1 3848 3 chr6A.!!$F2 3847
2 TraesCS6B01G190600 chr6D 125234620 125241767 7147 True 1354.750000 2372 88.792000 1 4383 4 chr6D.!!$R2 4382

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
101 104 0.394192 CTCAACCTCAGGCTGACACA 59.606 55.0 14.43 0.0 0.00 3.72 F
896 1505 0.975887 CTTTTGGGTGGGTGGATTGG 59.024 55.0 0.00 0.0 0.00 3.16 F
1655 2286 0.874607 GGCGTGAGTCACAACGTTCT 60.875 55.0 22.66 0.0 33.40 3.01 F
2195 2971 1.182667 GTTTTACATGGCCCAGGTCC 58.817 55.0 3.33 0.0 29.18 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1379 1992 0.102120 ATAGTGCTCACTGCTCGCTC 59.898 55.0 12.43 0.0 42.52 5.03 R
2572 3373 0.902984 TCCGTAAGCTTGGCTCCAGA 60.903 55.0 9.86 0.0 38.25 3.86 R
3036 3841 0.175989 CTTCAGAGGCCCGTACTTCC 59.824 60.0 0.00 0.0 0.00 3.46 R
4175 7642 0.037697 CGGGTTGTCGAGGATTCACA 60.038 55.0 0.00 0.0 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 39 2.178474 ATTTTGTGCATCGTCATCGC 57.822 45.000 0.00 0.00 36.96 4.58
39 41 1.288419 TTTGTGCATCGTCATCGCGT 61.288 50.000 5.77 0.00 36.96 6.01
95 98 2.227036 CCACCCTCAACCTCAGGCT 61.227 63.158 0.00 0.00 0.00 4.58
101 104 0.394192 CTCAACCTCAGGCTGACACA 59.606 55.000 14.43 0.00 0.00 3.72
132 135 2.914289 GGCCACCTCTGCATAGCT 59.086 61.111 0.00 0.00 0.00 3.32
183 186 3.388913 AGGAGAAGAAGGGGATTCGATT 58.611 45.455 0.00 0.00 43.16 3.34
204 207 5.596836 TTTGTTTGAGCAAATGAGTCCTT 57.403 34.783 0.00 0.00 33.91 3.36
235 238 4.210331 AGCCATGAGGTAAATGATGAACC 58.790 43.478 0.00 0.00 37.19 3.62
287 868 6.475207 AGTTTAAAAGAGCATATACAACGCG 58.525 36.000 3.53 3.53 0.00 6.01
305 886 1.069022 GCGAGTCATGTGCATGTGTTT 60.069 47.619 11.38 0.00 39.72 2.83
309 890 5.731278 CGAGTCATGTGCATGTGTTTATAG 58.269 41.667 11.38 0.00 39.72 1.31
314 895 4.293662 TGTGCATGTGTTTATAGGGACA 57.706 40.909 0.00 0.00 28.72 4.02
325 906 7.101054 GTGTTTATAGGGACAAGTGTATGTGA 58.899 38.462 0.00 0.00 32.57 3.58
327 910 2.770164 AGGGACAAGTGTATGTGAGC 57.230 50.000 0.00 0.00 32.57 4.26
328 911 2.260822 AGGGACAAGTGTATGTGAGCT 58.739 47.619 0.00 0.00 32.57 4.09
329 912 3.441101 AGGGACAAGTGTATGTGAGCTA 58.559 45.455 0.00 0.00 32.57 3.32
330 913 3.838317 AGGGACAAGTGTATGTGAGCTAA 59.162 43.478 0.00 0.00 32.57 3.09
331 914 3.933332 GGGACAAGTGTATGTGAGCTAAC 59.067 47.826 0.00 0.00 32.57 2.34
332 915 4.322801 GGGACAAGTGTATGTGAGCTAACT 60.323 45.833 2.06 0.00 32.57 2.24
333 916 4.627467 GGACAAGTGTATGTGAGCTAACTG 59.373 45.833 2.06 0.00 32.57 3.16
334 917 5.215252 ACAAGTGTATGTGAGCTAACTGT 57.785 39.130 2.06 0.00 30.82 3.55
335 918 6.340962 ACAAGTGTATGTGAGCTAACTGTA 57.659 37.500 2.06 0.00 30.82 2.74
470 1066 1.014564 GTGGACCGCAGCTGTTCTAC 61.015 60.000 16.64 13.21 0.00 2.59
493 1101 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
494 1102 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
495 1103 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
496 1104 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
497 1105 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
498 1106 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
499 1107 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
500 1108 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
501 1109 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
502 1110 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
503 1111 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
504 1112 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
505 1113 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
506 1114 5.523588 AGAGAGAGAGAGAGAGAGAGAGAA 58.476 45.833 0.00 0.00 0.00 2.87
507 1115 5.960811 AGAGAGAGAGAGAGAGAGAGAGAAA 59.039 44.000 0.00 0.00 0.00 2.52
508 1116 6.098124 AGAGAGAGAGAGAGAGAGAGAGAAAG 59.902 46.154 0.00 0.00 0.00 2.62
509 1117 5.960811 AGAGAGAGAGAGAGAGAGAGAAAGA 59.039 44.000 0.00 0.00 0.00 2.52
510 1118 6.098124 AGAGAGAGAGAGAGAGAGAGAAAGAG 59.902 46.154 0.00 0.00 0.00 2.85
511 1119 5.960811 AGAGAGAGAGAGAGAGAGAAAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
512 1120 6.098124 AGAGAGAGAGAGAGAGAGAAAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
513 1121 5.960811 AGAGAGAGAGAGAGAGAAAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
514 1122 6.098124 AGAGAGAGAGAGAGAGAAAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
515 1123 5.960811 AGAGAGAGAGAGAGAAAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
516 1124 6.098124 AGAGAGAGAGAGAGAAAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
651 1259 7.730084 TGATTCCATATGATCCGATCCTAATC 58.270 38.462 3.65 3.72 0.00 1.75
677 1285 6.560003 AGGGAAAAACAAGACCATTTCTTT 57.440 33.333 0.00 0.00 42.37 2.52
716 1325 2.413837 ACTACAACATGGCTTGACGAC 58.586 47.619 7.45 0.00 0.00 4.34
766 1375 8.191110 TGGATTCCATAGTAGGGTAGGATTAAT 58.809 37.037 0.00 0.00 0.00 1.40
782 1391 4.991687 GGATTAATCTCCTGGAATGTCGAC 59.008 45.833 14.95 9.11 32.18 4.20
794 1403 3.675225 GGAATGTCGACGGATATCATGTG 59.325 47.826 11.62 0.00 0.00 3.21
795 1404 4.299155 GAATGTCGACGGATATCATGTGT 58.701 43.478 11.62 0.00 0.00 3.72
796 1405 3.349488 TGTCGACGGATATCATGTGTC 57.651 47.619 11.62 5.92 0.00 3.67
842 1451 7.228706 AGGTTAAGCCCATATTGAAATAGTTCG 59.771 37.037 0.00 0.00 35.57 3.95
896 1505 0.975887 CTTTTGGGTGGGTGGATTGG 59.024 55.000 0.00 0.00 0.00 3.16
1149 1762 6.485313 TGCTCCTTCTTCTTTTTCGTCATTTA 59.515 34.615 0.00 0.00 0.00 1.40
1163 1776 3.726782 CGTCATTTAGCCGCTTTGTTACC 60.727 47.826 0.00 0.00 0.00 2.85
1379 1992 5.639506 ACACGAGATTGAGAATTACTTGTGG 59.360 40.000 0.98 0.00 43.26 4.17
1380 1993 5.869344 CACGAGATTGAGAATTACTTGTGGA 59.131 40.000 0.00 0.00 38.53 4.02
1381 1994 6.035435 CACGAGATTGAGAATTACTTGTGGAG 59.965 42.308 0.00 0.00 38.53 3.86
1382 1995 5.006165 CGAGATTGAGAATTACTTGTGGAGC 59.994 44.000 0.00 0.00 0.00 4.70
1442 2055 9.548208 GAGATTTAAAAGAATGTTAGCAGTCAC 57.452 33.333 9.69 0.00 41.66 3.67
1473 2086 6.467677 ACTTGGGATATACACAGATATGTGC 58.532 40.000 20.07 3.57 43.13 4.57
1509 2140 6.187125 AGATCAAATCAAATCACTTGTCCG 57.813 37.500 0.00 0.00 36.34 4.79
1510 2141 4.764679 TCAAATCAAATCACTTGTCCGG 57.235 40.909 0.00 0.00 36.34 5.14
1516 2147 3.262151 TCAAATCACTTGTCCGGTCCATA 59.738 43.478 0.00 0.00 36.34 2.74
1568 2199 2.584835 TGCAGGTAAGATGGCAAAGT 57.415 45.000 0.00 0.00 32.54 2.66
1579 2210 3.571401 AGATGGCAAAGTTGAAGGAGTTG 59.429 43.478 0.00 0.00 0.00 3.16
1583 2214 3.447742 GCAAAGTTGAAGGAGTTGTTGG 58.552 45.455 0.00 0.00 0.00 3.77
1585 2216 4.672409 CAAAGTTGAAGGAGTTGTTGGAC 58.328 43.478 0.00 0.00 0.00 4.02
1587 2218 3.545703 AGTTGAAGGAGTTGTTGGACAG 58.454 45.455 0.00 0.00 0.00 3.51
1633 2264 1.675310 CAGCGCACCTGATCCCAAA 60.675 57.895 11.47 0.00 44.64 3.28
1646 2277 4.395519 CCAAATGGGCGTGAGTCA 57.604 55.556 0.00 0.00 37.54 3.41
1647 2278 1.875963 CCAAATGGGCGTGAGTCAC 59.124 57.895 13.56 13.56 37.54 3.67
1648 2279 0.888736 CCAAATGGGCGTGAGTCACA 60.889 55.000 22.66 3.82 37.54 3.58
1649 2280 0.950836 CAAATGGGCGTGAGTCACAA 59.049 50.000 22.66 5.82 37.54 3.33
1650 2281 0.951558 AAATGGGCGTGAGTCACAAC 59.048 50.000 22.66 13.58 37.54 3.32
1651 2282 1.227999 AATGGGCGTGAGTCACAACG 61.228 55.000 22.66 10.43 37.54 4.10
1652 2283 2.279918 GGGCGTGAGTCACAACGT 60.280 61.111 22.66 0.00 37.54 3.99
1653 2284 1.885850 GGGCGTGAGTCACAACGTT 60.886 57.895 22.66 0.00 37.54 3.99
1654 2285 1.563173 GGCGTGAGTCACAACGTTC 59.437 57.895 22.66 4.47 33.40 3.95
1655 2286 0.874607 GGCGTGAGTCACAACGTTCT 60.875 55.000 22.66 0.00 33.40 3.01
1656 2287 1.601162 GGCGTGAGTCACAACGTTCTA 60.601 52.381 22.66 0.00 33.40 2.10
1657 2288 2.121786 GCGTGAGTCACAACGTTCTAA 58.878 47.619 22.66 0.00 33.40 2.10
1658 2289 2.097541 GCGTGAGTCACAACGTTCTAAC 60.098 50.000 22.66 0.00 33.40 2.34
1659 2290 2.470257 CGTGAGTCACAACGTTCTAACC 59.530 50.000 22.66 0.00 33.40 2.85
1660 2291 3.450578 GTGAGTCACAACGTTCTAACCA 58.549 45.455 18.54 0.00 34.08 3.67
1661 2292 4.056050 GTGAGTCACAACGTTCTAACCAT 58.944 43.478 18.54 0.00 34.08 3.55
1662 2293 4.510340 GTGAGTCACAACGTTCTAACCATT 59.490 41.667 18.54 0.00 34.08 3.16
1663 2294 5.007332 GTGAGTCACAACGTTCTAACCATTT 59.993 40.000 18.54 0.00 34.08 2.32
1664 2295 5.007234 TGAGTCACAACGTTCTAACCATTTG 59.993 40.000 0.00 0.00 0.00 2.32
1681 2312 7.016361 ACCATTTGACGATTTAAGCTATCAC 57.984 36.000 0.00 0.00 0.00 3.06
1740 2371 8.129840 CCTGATTCTCATCATTTTCTGACATTC 58.870 37.037 0.00 0.00 38.81 2.67
1831 2462 9.762381 TTTCTTTATTCACTAATATTGGGGTGT 57.238 29.630 0.54 0.00 0.00 4.16
1832 2463 8.746052 TCTTTATTCACTAATATTGGGGTGTG 57.254 34.615 0.54 2.03 0.00 3.82
1842 2487 1.809133 TTGGGGTGTGTCCTTACAGA 58.191 50.000 0.00 0.00 35.91 3.41
1921 2566 6.045072 TCGGTACACATATCTCAAAGGTTT 57.955 37.500 0.00 0.00 0.00 3.27
1935 2580 4.277423 TCAAAGGTTTAACTAGCTGCAACC 59.723 41.667 1.02 5.80 37.72 3.77
1939 2584 3.305131 GGTTTAACTAGCTGCAACCCAAC 60.305 47.826 1.02 0.00 32.20 3.77
1953 2598 6.862209 TGCAACCCAACAATAATCTTATGTC 58.138 36.000 0.00 0.00 0.00 3.06
1968 2613 8.738645 AATCTTATGTCTGTATTTTCCCACTC 57.261 34.615 0.00 0.00 0.00 3.51
1969 2614 6.650120 TCTTATGTCTGTATTTTCCCACTCC 58.350 40.000 0.00 0.00 0.00 3.85
1972 2617 5.319043 TGTCTGTATTTTCCCACTCCTTT 57.681 39.130 0.00 0.00 0.00 3.11
1973 2618 5.701224 TGTCTGTATTTTCCCACTCCTTTT 58.299 37.500 0.00 0.00 0.00 2.27
1974 2619 5.534654 TGTCTGTATTTTCCCACTCCTTTTG 59.465 40.000 0.00 0.00 0.00 2.44
1975 2620 5.535030 GTCTGTATTTTCCCACTCCTTTTGT 59.465 40.000 0.00 0.00 0.00 2.83
1976 2621 6.040504 GTCTGTATTTTCCCACTCCTTTTGTT 59.959 38.462 0.00 0.00 0.00 2.83
1977 2622 6.609616 TCTGTATTTTCCCACTCCTTTTGTTT 59.390 34.615 0.00 0.00 0.00 2.83
1978 2623 7.125053 TCTGTATTTTCCCACTCCTTTTGTTTT 59.875 33.333 0.00 0.00 0.00 2.43
1981 2626 9.256477 GTATTTTCCCACTCCTTTTGTTTTAAG 57.744 33.333 0.00 0.00 0.00 1.85
1986 2631 7.722363 TCCCACTCCTTTTGTTTTAAGAAATC 58.278 34.615 0.00 0.00 0.00 2.17
1988 2633 7.653311 CCCACTCCTTTTGTTTTAAGAAATCAG 59.347 37.037 0.00 0.00 0.00 2.90
1989 2634 8.197439 CCACTCCTTTTGTTTTAAGAAATCAGT 58.803 33.333 0.00 0.00 0.00 3.41
2055 2828 7.172190 GCAAGTAGCACACATGATGTAAGATAT 59.828 37.037 0.00 0.00 40.64 1.63
2056 2829 9.696917 CAAGTAGCACACATGATGTAAGATATA 57.303 33.333 0.00 0.00 40.64 0.86
2064 2837 7.095270 CACATGATGTAAGATATAGCTGCAGA 58.905 38.462 20.43 0.00 0.00 4.26
2068 2841 9.814899 ATGATGTAAGATATAGCTGCAGAATAC 57.185 33.333 20.43 8.06 0.00 1.89
2069 2842 9.029368 TGATGTAAGATATAGCTGCAGAATACT 57.971 33.333 20.43 7.41 0.00 2.12
2078 2851 4.248859 AGCTGCAGAATACTACACACTTG 58.751 43.478 20.43 0.00 0.00 3.16
2087 2860 6.372659 AGAATACTACACACTTGCCTTCATTG 59.627 38.462 0.00 0.00 0.00 2.82
2089 2862 1.696063 ACACACTTGCCTTCATTGCT 58.304 45.000 0.00 0.00 0.00 3.91
2106 2879 6.563422 TCATTGCTATATCAGTTTTGTTGCC 58.437 36.000 0.00 0.00 0.00 4.52
2118 2891 6.876257 TCAGTTTTGTTGCCATTTAACTGTTT 59.124 30.769 0.00 0.00 41.76 2.83
2123 2896 5.734720 TGTTGCCATTTAACTGTTTGGAAA 58.265 33.333 12.70 6.51 0.00 3.13
2124 2897 6.352516 TGTTGCCATTTAACTGTTTGGAAAT 58.647 32.000 12.70 4.36 29.59 2.17
2125 2898 6.259608 TGTTGCCATTTAACTGTTTGGAAATG 59.740 34.615 12.70 14.24 38.46 2.32
2126 2899 6.166984 TGCCATTTAACTGTTTGGAAATGA 57.833 33.333 20.66 6.66 40.25 2.57
2127 2900 6.222389 TGCCATTTAACTGTTTGGAAATGAG 58.778 36.000 20.66 14.49 40.25 2.90
2128 2901 5.120674 GCCATTTAACTGTTTGGAAATGAGC 59.879 40.000 20.66 18.14 40.25 4.26
2129 2902 6.458210 CCATTTAACTGTTTGGAAATGAGCT 58.542 36.000 20.66 0.00 40.25 4.09
2131 2904 3.375782 AACTGTTTGGAAATGAGCTGC 57.624 42.857 0.00 0.00 0.00 5.25
2133 2906 2.961062 ACTGTTTGGAAATGAGCTGCTT 59.039 40.909 2.53 0.00 0.00 3.91
2134 2907 4.144297 ACTGTTTGGAAATGAGCTGCTTA 58.856 39.130 2.53 0.00 0.00 3.09
2135 2908 4.584325 ACTGTTTGGAAATGAGCTGCTTAA 59.416 37.500 2.53 0.00 0.00 1.85
2140 2913 8.965819 TGTTTGGAAATGAGCTGCTTAATATAA 58.034 29.630 2.53 0.00 0.00 0.98
2174 2947 8.803397 AGTTCCAAAGAAGTTGTAAGTTAACT 57.197 30.769 1.12 1.12 39.92 2.24
2176 2949 9.285770 GTTCCAAAGAAGTTGTAAGTTAACTTG 57.714 33.333 27.40 9.36 45.52 3.16
2195 2971 1.182667 GTTTTACATGGCCCAGGTCC 58.817 55.000 3.33 0.00 29.18 4.46
2233 3009 6.276847 AGATAAGTGGACTGACGATGAAATC 58.723 40.000 0.00 0.00 40.89 2.17
2293 3069 3.209410 CGCAATCTATGAGGCCTTTCTT 58.791 45.455 6.77 0.00 0.00 2.52
2329 3105 2.350895 CCACACCCAGATTCCGCA 59.649 61.111 0.00 0.00 0.00 5.69
2347 3123 1.474077 GCACAGGAAGATCGGCAAAAT 59.526 47.619 0.00 0.00 0.00 1.82
2418 3217 4.811557 AGTTTGATCGCCTAGCATAACTTC 59.188 41.667 0.00 0.00 27.64 3.01
2431 3230 3.987220 GCATAACTTCGCAAATGGTTGTT 59.013 39.130 0.00 0.00 37.06 2.83
2448 3247 5.119694 GGTTGTTTACCTTGCAAAAATCCA 58.880 37.500 0.00 0.00 44.10 3.41
2449 3248 5.762711 GGTTGTTTACCTTGCAAAAATCCAT 59.237 36.000 0.00 0.00 44.10 3.41
2452 3253 8.831550 GTTGTTTACCTTGCAAAAATCCATAAA 58.168 29.630 0.00 0.00 0.00 1.40
2471 3272 6.016360 CCATAAAGGCATTTACAATCCGATCA 60.016 38.462 5.58 0.00 33.78 2.92
2474 3275 5.695851 AGGCATTTACAATCCGATCAATC 57.304 39.130 0.00 0.00 0.00 2.67
2480 3281 7.648908 GCATTTACAATCCGATCAATCAAATGA 59.351 33.333 15.29 0.00 34.39 2.57
2489 3290 7.420002 TCCGATCAATCAAATGATTCATTCAC 58.580 34.615 12.15 0.00 42.41 3.18
2490 3291 7.067251 TCCGATCAATCAAATGATTCATTCACA 59.933 33.333 12.15 0.65 42.41 3.58
2513 3314 8.255206 CACAAACTCCATATTACTACCACTGTA 58.745 37.037 0.00 0.00 0.00 2.74
2515 3316 9.832445 CAAACTCCATATTACTACCACTGTAAT 57.168 33.333 0.00 0.00 41.63 1.89
2516 3317 9.832445 AAACTCCATATTACTACCACTGTAATG 57.168 33.333 8.76 0.00 39.85 1.90
2517 3318 7.442656 ACTCCATATTACTACCACTGTAATGC 58.557 38.462 8.76 0.00 39.85 3.56
2572 3373 9.093458 AGGTCCAAATATGAACTTCAAGAATTT 57.907 29.630 0.00 0.96 0.00 1.82
2612 3413 4.702612 GGATCGTCTCTAATCATCCTAGCA 59.297 45.833 0.00 0.00 31.78 3.49
2680 3481 3.688159 GCAAGGCTGCCCCAACAG 61.688 66.667 16.57 0.09 43.26 3.16
2705 3508 9.463443 AGTGCAAATTAAGTTTAACACAATCTC 57.537 29.630 12.82 0.00 37.99 2.75
2826 3629 5.180868 GGCACCAAATTAGCTATCAGAGATG 59.819 44.000 0.00 0.00 0.00 2.90
2843 3646 1.961180 ATGTGTCTAGCAGCGACCCC 61.961 60.000 0.00 0.00 0.00 4.95
2968 3773 2.973224 GCATTGTTGTGTACAGAAAGCG 59.027 45.455 7.06 0.00 38.19 4.68
3036 3841 1.543802 ACTCAAGCTCTCTGTTCCTCG 59.456 52.381 0.00 0.00 0.00 4.63
3105 3911 4.932146 AGCACTAAGAAACAAACGCAAAT 58.068 34.783 0.00 0.00 0.00 2.32
3107 3913 4.148174 GCACTAAGAAACAAACGCAAATCC 59.852 41.667 0.00 0.00 0.00 3.01
3113 3919 4.764823 AGAAACAAACGCAAATCCCAGATA 59.235 37.500 0.00 0.00 0.00 1.98
3294 4100 0.103937 GAGATCCAGAACTGCTCGGG 59.896 60.000 0.00 0.00 40.57 5.14
3327 4133 4.760047 CGGTGGCTCAAGTCCGGG 62.760 72.222 0.00 0.00 39.41 5.73
3493 4299 6.304126 CGGATATACGATGGCAAATTTGTAC 58.696 40.000 19.03 12.85 35.47 2.90
3598 6139 3.452755 TGAACTCAAGTTTCGCAGAGA 57.547 42.857 0.00 0.00 38.56 3.10
3780 6332 6.042093 ACCATACAATCTAGGTGATGTAGTGG 59.958 42.308 11.15 11.15 35.21 4.00
3781 6333 6.459066 CATACAATCTAGGTGATGTAGTGGG 58.541 44.000 1.84 0.00 35.21 4.61
3833 6386 4.688879 AGAGATCTCGTCGATAGTGATGAC 59.311 45.833 16.97 6.85 30.84 3.06
3858 6413 4.593634 ACAGTAGTTATATCCAAGGCCTCC 59.406 45.833 5.23 0.00 0.00 4.30
3873 6428 0.254747 CCTCCGGATGGGTAAAAGCA 59.745 55.000 3.57 0.00 37.00 3.91
3881 6436 4.685924 GGATGGGTAAAAGCAATGTCATG 58.314 43.478 0.00 0.00 0.00 3.07
3943 6498 6.631971 ACGGAGTTTACCTATCTACTAAGC 57.368 41.667 0.00 0.00 37.78 3.09
3945 6500 5.468072 CGGAGTTTACCTATCTACTAAGCGA 59.532 44.000 0.00 0.00 0.00 4.93
3946 6501 6.347563 CGGAGTTTACCTATCTACTAAGCGAG 60.348 46.154 0.00 0.00 0.00 5.03
3947 6502 6.072563 GGAGTTTACCTATCTACTAAGCGAGG 60.073 46.154 0.00 0.00 32.98 4.63
3964 7413 2.924290 CGAGGCTACAAGTTTCTGCTAC 59.076 50.000 0.00 0.00 0.00 3.58
3967 7416 2.000447 GCTACAAGTTTCTGCTACCGG 59.000 52.381 0.00 0.00 0.00 5.28
4006 7455 6.688073 TTTTGTTGAAATATGCCCCCTTTA 57.312 33.333 0.00 0.00 0.00 1.85
4017 7466 2.039348 TGCCCCCTTTATATAAGCCGTC 59.961 50.000 0.00 0.00 0.00 4.79
4094 7546 9.319143 GTTATAGAGAACTAATCACATGCAACT 57.681 33.333 0.00 0.00 32.04 3.16
4115 7567 9.042008 GCAACTATAAAATCCTCGAAATAGTGA 57.958 33.333 0.00 0.00 32.12 3.41
4123 7575 6.927294 ATCCTCGAAATAGTGAATTGTTCC 57.073 37.500 0.00 0.00 0.00 3.62
4124 7576 6.049955 TCCTCGAAATAGTGAATTGTTCCT 57.950 37.500 0.00 0.00 0.00 3.36
4125 7577 6.472887 TCCTCGAAATAGTGAATTGTTCCTT 58.527 36.000 0.00 0.00 0.00 3.36
4126 7578 7.617225 TCCTCGAAATAGTGAATTGTTCCTTA 58.383 34.615 0.00 0.00 0.00 2.69
4127 7579 7.548075 TCCTCGAAATAGTGAATTGTTCCTTAC 59.452 37.037 0.00 0.00 0.00 2.34
4129 7596 6.869913 TCGAAATAGTGAATTGTTCCTTACGT 59.130 34.615 0.00 0.00 0.00 3.57
4143 7610 2.286833 CCTTACGTGCATGGAATTACCG 59.713 50.000 11.36 0.00 42.61 4.02
4148 7615 3.253677 ACGTGCATGGAATTACCGAAAAA 59.746 39.130 11.36 0.00 42.61 1.94
4149 7616 3.851403 CGTGCATGGAATTACCGAAAAAG 59.149 43.478 0.00 0.00 42.61 2.27
4151 7618 3.186909 GCATGGAATTACCGAAAAAGGC 58.813 45.455 0.00 0.00 42.61 4.35
4156 7623 5.293560 TGGAATTACCGAAAAAGGCTTTTG 58.706 37.500 24.73 15.11 42.61 2.44
4157 7624 4.151689 GGAATTACCGAAAAAGGCTTTTGC 59.848 41.667 24.73 21.78 46.64 3.68
4168 7635 2.978018 GCTTTTGCCCCGGTTCGAG 61.978 63.158 0.00 0.00 40.15 4.04
4169 7636 1.302192 CTTTTGCCCCGGTTCGAGA 60.302 57.895 0.00 0.00 0.00 4.04
4170 7637 0.887387 CTTTTGCCCCGGTTCGAGAA 60.887 55.000 0.00 0.00 0.00 2.87
4173 7640 0.250989 TTGCCCCGGTTCGAGAAATT 60.251 50.000 0.00 0.00 0.00 1.82
4175 7642 1.210967 TGCCCCGGTTCGAGAAATTAT 59.789 47.619 0.00 0.00 0.00 1.28
4178 7645 2.612212 CCCCGGTTCGAGAAATTATGTG 59.388 50.000 0.00 0.00 0.00 3.21
4186 7655 6.292381 GGTTCGAGAAATTATGTGAATCCTCG 60.292 42.308 0.00 0.00 42.25 4.63
4207 7676 1.868498 ACAACCCGATACAAACACACG 59.132 47.619 0.00 0.00 0.00 4.49
4208 7677 2.136728 CAACCCGATACAAACACACGA 58.863 47.619 0.00 0.00 0.00 4.35
4220 7689 0.248012 ACACACGACACTCCAACACA 59.752 50.000 0.00 0.00 0.00 3.72
4221 7690 0.650512 CACACGACACTCCAACACAC 59.349 55.000 0.00 0.00 0.00 3.82
4222 7691 0.804544 ACACGACACTCCAACACACG 60.805 55.000 0.00 0.00 0.00 4.49
4223 7692 1.881252 ACGACACTCCAACACACGC 60.881 57.895 0.00 0.00 0.00 5.34
4293 7762 3.447586 CCCTAGCACTACAAGAGCTACAA 59.552 47.826 2.49 0.00 40.34 2.41
4363 7832 2.032681 AACCGTGAGCTCCAAGGC 59.967 61.111 12.15 0.00 46.59 4.35
4389 7858 2.440409 CTTCAGGAAGGTGATGTTGGG 58.560 52.381 1.01 0.00 34.87 4.12
4390 7859 0.698238 TCAGGAAGGTGATGTTGGGG 59.302 55.000 0.00 0.00 0.00 4.96
4391 7860 0.698238 CAGGAAGGTGATGTTGGGGA 59.302 55.000 0.00 0.00 0.00 4.81
4392 7861 1.075374 CAGGAAGGTGATGTTGGGGAA 59.925 52.381 0.00 0.00 0.00 3.97
4393 7862 1.075536 AGGAAGGTGATGTTGGGGAAC 59.924 52.381 0.00 0.00 0.00 3.62
4394 7863 1.165270 GAAGGTGATGTTGGGGAACG 58.835 55.000 0.00 0.00 0.00 3.95
4395 7864 0.476771 AAGGTGATGTTGGGGAACGT 59.523 50.000 0.00 0.00 0.00 3.99
4396 7865 1.354101 AGGTGATGTTGGGGAACGTA 58.646 50.000 0.00 0.00 0.00 3.57
4397 7866 1.278127 AGGTGATGTTGGGGAACGTAG 59.722 52.381 0.00 0.00 0.00 3.51
4398 7867 1.084289 GTGATGTTGGGGAACGTAGC 58.916 55.000 0.00 0.00 0.00 3.58
4399 7868 0.687920 TGATGTTGGGGAACGTAGCA 59.312 50.000 0.00 0.00 0.00 3.49
4400 7869 1.280710 TGATGTTGGGGAACGTAGCAT 59.719 47.619 0.00 0.00 0.00 3.79
4401 7870 1.670811 GATGTTGGGGAACGTAGCATG 59.329 52.381 0.00 0.00 0.00 4.06
4402 7871 0.958382 TGTTGGGGAACGTAGCATGC 60.958 55.000 10.51 10.51 0.00 4.06
4403 7872 0.958382 GTTGGGGAACGTAGCATGCA 60.958 55.000 21.98 2.77 0.00 3.96
4404 7873 0.250945 TTGGGGAACGTAGCATGCAA 60.251 50.000 21.98 0.00 0.00 4.08
4405 7874 0.034574 TGGGGAACGTAGCATGCAAT 60.035 50.000 21.98 1.90 0.00 3.56
4406 7875 1.102978 GGGGAACGTAGCATGCAATT 58.897 50.000 21.98 7.96 0.00 2.32
4407 7876 1.476488 GGGGAACGTAGCATGCAATTT 59.524 47.619 21.98 7.02 0.00 1.82
4408 7877 2.479560 GGGGAACGTAGCATGCAATTTC 60.480 50.000 21.98 15.31 0.00 2.17
4409 7878 2.163412 GGGAACGTAGCATGCAATTTCA 59.837 45.455 21.98 0.00 0.00 2.69
4410 7879 3.366883 GGGAACGTAGCATGCAATTTCAA 60.367 43.478 21.98 0.00 0.00 2.69
4411 7880 4.233789 GGAACGTAGCATGCAATTTCAAA 58.766 39.130 21.98 0.00 0.00 2.69
4412 7881 4.683781 GGAACGTAGCATGCAATTTCAAAA 59.316 37.500 21.98 0.00 0.00 2.44
4413 7882 5.176590 GGAACGTAGCATGCAATTTCAAAAA 59.823 36.000 21.98 0.00 0.00 1.94
4436 7905 6.699575 AAAAATCCTACGCTTATGCAAGAT 57.300 33.333 0.00 0.00 39.64 2.40
4437 7906 5.931441 AAATCCTACGCTTATGCAAGATC 57.069 39.130 0.00 0.00 39.64 2.75
4438 7907 4.881019 ATCCTACGCTTATGCAAGATCT 57.119 40.909 0.00 0.00 39.64 2.75
4439 7908 5.984695 ATCCTACGCTTATGCAAGATCTA 57.015 39.130 0.00 0.00 39.64 1.98
4440 7909 5.984695 TCCTACGCTTATGCAAGATCTAT 57.015 39.130 0.00 0.00 39.64 1.98
4441 7910 5.955488 TCCTACGCTTATGCAAGATCTATC 58.045 41.667 0.00 0.00 39.64 2.08
4442 7911 5.712446 TCCTACGCTTATGCAAGATCTATCT 59.288 40.000 0.00 0.00 39.64 1.98
4456 7925 6.224665 AGATCTATCTTGGAGATGCATAGC 57.775 41.667 0.00 0.00 35.37 2.97
4457 7926 5.720520 AGATCTATCTTGGAGATGCATAGCA 59.279 40.000 0.00 0.00 37.01 3.49
4458 7927 5.813513 TCTATCTTGGAGATGCATAGCAA 57.186 39.130 0.00 0.00 43.62 3.91
4459 7928 5.545588 TCTATCTTGGAGATGCATAGCAAC 58.454 41.667 0.00 0.00 43.62 4.17
4460 7929 2.554142 TCTTGGAGATGCATAGCAACG 58.446 47.619 0.00 0.00 43.62 4.10
4461 7930 2.168313 TCTTGGAGATGCATAGCAACGA 59.832 45.455 0.00 0.00 43.62 3.85
4462 7931 2.229675 TGGAGATGCATAGCAACGAG 57.770 50.000 0.00 0.00 43.62 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.672030 GCACAAAATTGCTGGGCCC 60.672 57.895 17.59 17.59 37.23 5.80
28 30 2.705220 CGTAGGACGCGATGACGA 59.295 61.111 15.93 0.00 41.65 4.20
57 60 1.382557 TGGATCTGGGCGCTTAGGA 60.383 57.895 7.64 1.06 0.00 2.94
124 127 2.579518 CGCGACGACAGCTATGCA 60.580 61.111 0.00 0.00 0.00 3.96
132 135 3.598715 ACAAGGACCGCGACGACA 61.599 61.111 8.23 0.00 0.00 4.35
183 186 4.202141 CCAAGGACTCATTTGCTCAAACAA 60.202 41.667 0.00 0.00 32.51 2.83
204 207 6.894654 TCATTTACCTCATGGCTAAAAATCCA 59.105 34.615 0.00 0.00 36.63 3.41
247 250 7.822822 TCTTTTAAACTAGTGCCTTATCACTCC 59.177 37.037 0.00 0.00 45.32 3.85
250 253 7.119262 TGCTCTTTTAAACTAGTGCCTTATCAC 59.881 37.037 0.00 0.00 37.24 3.06
287 868 5.008019 CCCTATAAACACATGCACATGACTC 59.992 44.000 17.19 0.00 41.20 3.36
305 886 5.208890 AGCTCACATACACTTGTCCCTATA 58.791 41.667 0.00 0.00 0.00 1.31
309 890 2.770164 AGCTCACATACACTTGTCCC 57.230 50.000 0.00 0.00 0.00 4.46
314 895 8.294954 AGTATACAGTTAGCTCACATACACTT 57.705 34.615 5.50 0.00 0.00 3.16
401 996 3.833442 CGCACTACGCAGATTATCCATA 58.167 45.455 0.00 0.00 42.60 2.74
418 1013 3.549070 CGGTAACTTCACCTAATACGCAC 59.451 47.826 0.00 0.00 36.35 5.34
470 1066 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
493 1101 5.960811 TCTCTCTCTCTTTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
494 1102 6.227298 TCTCTCTCTCTTTCTCTCTCTCTC 57.773 45.833 0.00 0.00 0.00 3.20
495 1103 6.614906 AGATCTCTCTCTCTTTCTCTCTCTCT 59.385 42.308 0.00 0.00 0.00 3.10
496 1104 6.705381 CAGATCTCTCTCTCTTTCTCTCTCTC 59.295 46.154 0.00 0.00 0.00 3.20
497 1105 6.385176 TCAGATCTCTCTCTCTTTCTCTCTCT 59.615 42.308 0.00 0.00 0.00 3.10
498 1106 6.586344 TCAGATCTCTCTCTCTTTCTCTCTC 58.414 44.000 0.00 0.00 0.00 3.20
499 1107 6.409005 CCTCAGATCTCTCTCTCTTTCTCTCT 60.409 46.154 0.00 0.00 0.00 3.10
500 1108 5.762218 CCTCAGATCTCTCTCTCTTTCTCTC 59.238 48.000 0.00 0.00 0.00 3.20
501 1109 5.429762 TCCTCAGATCTCTCTCTCTTTCTCT 59.570 44.000 0.00 0.00 0.00 3.10
502 1110 5.684704 TCCTCAGATCTCTCTCTCTTTCTC 58.315 45.833 0.00 0.00 0.00 2.87
503 1111 5.192522 ACTCCTCAGATCTCTCTCTCTTTCT 59.807 44.000 0.00 0.00 0.00 2.52
504 1112 5.440610 ACTCCTCAGATCTCTCTCTCTTTC 58.559 45.833 0.00 0.00 0.00 2.62
505 1113 5.044919 TGACTCCTCAGATCTCTCTCTCTTT 60.045 44.000 0.00 0.00 0.00 2.52
506 1114 4.474651 TGACTCCTCAGATCTCTCTCTCTT 59.525 45.833 0.00 0.00 0.00 2.85
507 1115 4.040047 TGACTCCTCAGATCTCTCTCTCT 58.960 47.826 0.00 0.00 0.00 3.10
508 1116 4.384056 CTGACTCCTCAGATCTCTCTCTC 58.616 52.174 0.00 0.00 46.32 3.20
509 1117 3.137176 CCTGACTCCTCAGATCTCTCTCT 59.863 52.174 0.00 0.00 46.32 3.10
510 1118 3.117888 ACCTGACTCCTCAGATCTCTCTC 60.118 52.174 0.00 0.00 46.32 3.20
511 1119 2.852449 ACCTGACTCCTCAGATCTCTCT 59.148 50.000 0.00 0.00 46.32 3.10
512 1120 3.297134 ACCTGACTCCTCAGATCTCTC 57.703 52.381 0.00 0.00 46.32 3.20
513 1121 3.364549 CAACCTGACTCCTCAGATCTCT 58.635 50.000 0.00 0.00 46.32 3.10
514 1122 2.430332 CCAACCTGACTCCTCAGATCTC 59.570 54.545 0.00 0.00 46.32 2.75
515 1123 2.225496 ACCAACCTGACTCCTCAGATCT 60.225 50.000 0.00 0.00 46.32 2.75
516 1124 2.183679 ACCAACCTGACTCCTCAGATC 58.816 52.381 0.00 0.00 46.32 2.75
651 1259 1.975660 TGGTCTTGTTTTTCCCTCGG 58.024 50.000 0.00 0.00 0.00 4.63
677 1285 3.981211 AGTACTACGGCAGAAACGAAAA 58.019 40.909 0.00 0.00 34.93 2.29
716 1325 3.244181 GGAGGACCAAGACGAATTGTCG 61.244 54.545 0.00 0.00 43.40 4.35
766 1375 0.323087 TCCGTCGACATTCCAGGAGA 60.323 55.000 17.16 0.00 0.00 3.71
782 1391 6.980051 ATTGATGATGACACATGATATCCG 57.020 37.500 0.00 0.00 0.00 4.18
810 1419 5.445964 TCAATATGGGCTTAACCTCTTTCC 58.554 41.667 0.00 0.00 39.10 3.13
816 1425 7.228706 CGAACTATTTCAATATGGGCTTAACCT 59.771 37.037 0.00 0.00 39.10 3.50
821 1430 8.514330 TTAACGAACTATTTCAATATGGGCTT 57.486 30.769 0.00 0.00 0.00 4.35
842 1451 6.158598 TGCAATCAAGCAAGAAAGGATTAAC 58.841 36.000 0.00 0.00 42.46 2.01
896 1505 5.659440 TCAGTTAAGCAAATTGGGGAATC 57.341 39.130 0.00 0.00 0.00 2.52
1024 1634 1.067821 GTCTCTACCTGAAGCCATCCG 59.932 57.143 0.00 0.00 0.00 4.18
1107 1717 1.298563 CACACTGTGCCGTTTGCTG 60.299 57.895 7.90 0.00 42.00 4.41
1119 1729 4.553547 CGAAAAAGAAGAAGGAGCACACTG 60.554 45.833 0.00 0.00 0.00 3.66
1122 1732 3.541632 ACGAAAAAGAAGAAGGAGCACA 58.458 40.909 0.00 0.00 0.00 4.57
1126 1736 7.018235 GCTAAATGACGAAAAAGAAGAAGGAG 58.982 38.462 0.00 0.00 0.00 3.69
1127 1737 6.072673 GGCTAAATGACGAAAAAGAAGAAGGA 60.073 38.462 0.00 0.00 0.00 3.36
1128 1738 6.086871 GGCTAAATGACGAAAAAGAAGAAGG 58.913 40.000 0.00 0.00 0.00 3.46
1163 1776 9.219603 TGAATTCAAGAACTATTAACTGGAGTG 57.780 33.333 5.45 0.00 0.00 3.51
1301 1914 9.084533 TGCCCAACCATATTATTATTTTACTCC 57.915 33.333 0.00 0.00 0.00 3.85
1306 1919 8.713036 ACACATGCCCAACCATATTATTATTTT 58.287 29.630 0.00 0.00 0.00 1.82
1307 1920 8.149647 CACACATGCCCAACCATATTATTATTT 58.850 33.333 0.00 0.00 0.00 1.40
1308 1921 7.669427 CACACATGCCCAACCATATTATTATT 58.331 34.615 0.00 0.00 0.00 1.40
1309 1922 6.295236 GCACACATGCCCAACCATATTATTAT 60.295 38.462 0.00 0.00 46.97 1.28
1310 1923 5.010516 GCACACATGCCCAACCATATTATTA 59.989 40.000 0.00 0.00 46.97 0.98
1363 1976 4.245660 CTCGCTCCACAAGTAATTCTCAA 58.754 43.478 0.00 0.00 0.00 3.02
1379 1992 0.102120 ATAGTGCTCACTGCTCGCTC 59.898 55.000 12.43 0.00 42.52 5.03
1380 1993 0.534412 AATAGTGCTCACTGCTCGCT 59.466 50.000 12.43 0.00 42.52 4.93
1381 1994 0.649475 CAATAGTGCTCACTGCTCGC 59.351 55.000 12.43 0.00 42.52 5.03
1382 1995 2.001812 ACAATAGTGCTCACTGCTCG 57.998 50.000 12.43 1.86 42.52 5.03
1442 2055 0.782384 GTATATCCCAAGTTCGCGCG 59.218 55.000 26.76 26.76 0.00 6.86
1497 2128 4.199310 CAATATGGACCGGACAAGTGATT 58.801 43.478 9.46 3.57 0.00 2.57
1498 2129 3.808728 CAATATGGACCGGACAAGTGAT 58.191 45.455 9.46 0.00 0.00 3.06
1510 2141 2.351726 GAGTTCACGGTGCAATATGGAC 59.648 50.000 2.51 0.00 38.03 4.02
1516 2147 4.202101 TGAAATTTGAGTTCACGGTGCAAT 60.202 37.500 2.51 0.00 30.08 3.56
1568 2199 3.924114 TCTGTCCAACAACTCCTTCAA 57.076 42.857 0.00 0.00 0.00 2.69
1579 2210 3.003275 TGCGATTTTCACTTCTGTCCAAC 59.997 43.478 0.00 0.00 0.00 3.77
1583 2214 5.116074 CACAAATGCGATTTTCACTTCTGTC 59.884 40.000 0.00 0.00 0.00 3.51
1585 2216 4.143473 GCACAAATGCGATTTTCACTTCTG 60.143 41.667 0.00 0.00 43.33 3.02
1587 2218 4.297944 GCACAAATGCGATTTTCACTTC 57.702 40.909 0.00 0.00 43.33 3.01
1633 2264 1.667830 CGTTGTGACTCACGCCCAT 60.668 57.895 4.71 0.00 37.14 4.00
1646 2277 4.121317 TCGTCAAATGGTTAGAACGTTGT 58.879 39.130 5.00 3.64 0.00 3.32
1647 2278 4.718858 TCGTCAAATGGTTAGAACGTTG 57.281 40.909 5.00 0.00 0.00 4.10
1648 2279 5.934935 AATCGTCAAATGGTTAGAACGTT 57.065 34.783 0.00 0.00 0.00 3.99
1649 2280 5.934935 AAATCGTCAAATGGTTAGAACGT 57.065 34.783 0.00 0.00 0.00 3.99
1650 2281 6.464834 GCTTAAATCGTCAAATGGTTAGAACG 59.535 38.462 0.00 0.00 0.00 3.95
1651 2282 7.527457 AGCTTAAATCGTCAAATGGTTAGAAC 58.473 34.615 0.00 0.00 0.00 3.01
1652 2283 7.681939 AGCTTAAATCGTCAAATGGTTAGAA 57.318 32.000 0.00 0.00 0.00 2.10
1653 2284 8.958119 ATAGCTTAAATCGTCAAATGGTTAGA 57.042 30.769 0.00 0.00 0.00 2.10
1654 2285 8.826710 TGATAGCTTAAATCGTCAAATGGTTAG 58.173 33.333 0.00 0.00 0.00 2.34
1655 2286 8.609176 GTGATAGCTTAAATCGTCAAATGGTTA 58.391 33.333 0.00 0.00 0.00 2.85
1656 2287 7.336931 AGTGATAGCTTAAATCGTCAAATGGTT 59.663 33.333 0.00 0.00 0.00 3.67
1657 2288 6.823689 AGTGATAGCTTAAATCGTCAAATGGT 59.176 34.615 0.00 0.00 0.00 3.55
1658 2289 7.251704 AGTGATAGCTTAAATCGTCAAATGG 57.748 36.000 0.00 0.00 0.00 3.16
1661 2292 9.594478 TGAATAGTGATAGCTTAAATCGTCAAA 57.406 29.630 0.00 0.00 0.00 2.69
1662 2293 9.594478 TTGAATAGTGATAGCTTAAATCGTCAA 57.406 29.630 0.00 0.00 0.00 3.18
1663 2294 9.594478 TTTGAATAGTGATAGCTTAAATCGTCA 57.406 29.630 0.00 0.00 0.00 4.35
1664 2295 9.851043 GTTTGAATAGTGATAGCTTAAATCGTC 57.149 33.333 0.00 0.00 0.00 4.20
1699 2330 6.551227 TGAGAATCAGGCTGATAACTAGCTAA 59.449 38.462 29.02 10.81 42.56 3.09
1740 2371 6.062095 CAGAACCAAAAGGGGGTACATATAG 58.938 44.000 0.00 0.00 42.91 1.31
1745 2376 2.136863 TCAGAACCAAAAGGGGGTACA 58.863 47.619 0.00 0.00 42.91 2.90
1808 2439 8.519799 ACACACCCCAATATTAGTGAATAAAG 57.480 34.615 15.56 4.92 34.33 1.85
1819 2450 4.538490 TCTGTAAGGACACACCCCAATATT 59.462 41.667 0.00 0.00 40.05 1.28
1822 2453 2.344592 TCTGTAAGGACACACCCCAAT 58.655 47.619 0.00 0.00 40.05 3.16
1825 2456 1.906574 TGATCTGTAAGGACACACCCC 59.093 52.381 0.00 0.00 40.05 4.95
1826 2457 2.678190 GCTGATCTGTAAGGACACACCC 60.678 54.545 1.27 0.00 40.05 4.61
1828 2459 3.601443 AGCTGATCTGTAAGGACACAC 57.399 47.619 1.27 0.00 0.00 3.82
1831 2462 7.290014 TCCAATATTAGCTGATCTGTAAGGACA 59.710 37.037 0.00 0.00 0.00 4.02
1832 2463 7.671302 TCCAATATTAGCTGATCTGTAAGGAC 58.329 38.462 0.00 0.00 0.00 3.85
1921 2566 2.940994 TGTTGGGTTGCAGCTAGTTA 57.059 45.000 0.00 0.00 0.00 2.24
1953 2598 6.405278 AACAAAAGGAGTGGGAAAATACAG 57.595 37.500 0.00 0.00 0.00 2.74
1961 2606 7.343316 TGATTTCTTAAAACAAAAGGAGTGGGA 59.657 33.333 0.00 0.00 0.00 4.37
1962 2607 7.496747 TGATTTCTTAAAACAAAAGGAGTGGG 58.503 34.615 0.00 0.00 0.00 4.61
2040 2813 7.237209 TCTGCAGCTATATCTTACATCATGT 57.763 36.000 9.47 0.00 0.00 3.21
2055 2828 5.410924 CAAGTGTGTAGTATTCTGCAGCTA 58.589 41.667 9.47 1.37 37.00 3.32
2056 2829 4.248859 CAAGTGTGTAGTATTCTGCAGCT 58.751 43.478 9.47 2.48 37.00 4.24
2064 2837 5.106157 GCAATGAAGGCAAGTGTGTAGTATT 60.106 40.000 0.00 0.00 0.00 1.89
2068 2841 2.816087 AGCAATGAAGGCAAGTGTGTAG 59.184 45.455 0.00 0.00 0.00 2.74
2069 2842 2.862541 AGCAATGAAGGCAAGTGTGTA 58.137 42.857 0.00 0.00 0.00 2.90
2078 2851 6.799512 ACAAAACTGATATAGCAATGAAGGC 58.200 36.000 0.00 0.00 0.00 4.35
2106 2879 6.128742 GCAGCTCATTTCCAAACAGTTAAATG 60.129 38.462 11.53 11.53 39.54 2.32
2144 2917 8.570068 ACTTACAACTTCTTTGGAACTTGTTA 57.430 30.769 8.28 1.87 38.47 2.41
2147 2920 9.285770 GTTAACTTACAACTTCTTTGGAACTTG 57.714 33.333 0.00 0.00 39.84 3.16
2148 2921 9.239551 AGTTAACTTACAACTTCTTTGGAACTT 57.760 29.630 1.12 0.00 39.84 2.66
2163 2936 7.427214 GGCCATGTAAAACAAGTTAACTTACA 58.573 34.615 20.15 19.16 37.01 2.41
2174 2947 2.243810 GACCTGGGCCATGTAAAACAA 58.756 47.619 14.77 0.00 0.00 2.83
2176 2949 1.182667 GGACCTGGGCCATGTAAAAC 58.817 55.000 15.60 2.27 0.00 2.43
2181 2954 2.532715 ACAGGACCTGGGCCATGT 60.533 61.111 23.47 18.69 35.51 3.21
2182 2955 2.273449 GACAGGACCTGGGCCATG 59.727 66.667 23.47 18.01 35.51 3.66
2183 2956 2.204136 TGACAGGACCTGGGCCAT 60.204 61.111 23.47 8.49 35.51 4.40
2233 3009 2.233922 ACCAACTTCTACCATGGAGTCG 59.766 50.000 21.47 7.66 36.75 4.18
2293 3069 1.596934 CTTGCGGTAGCCTTCTGGA 59.403 57.895 0.00 0.00 44.33 3.86
2329 3105 4.871933 AAAATTTTGCCGATCTTCCTGT 57.128 36.364 1.75 0.00 0.00 4.00
2338 3114 9.868277 ATGAAATACTTGATAAAATTTTGCCGA 57.132 25.926 13.76 4.31 0.00 5.54
2431 3230 6.169800 GCCTTTATGGATTTTTGCAAGGTAA 58.830 36.000 0.00 0.00 38.35 2.85
2445 3244 5.441500 TCGGATTGTAAATGCCTTTATGGA 58.558 37.500 0.00 0.00 38.35 3.41
2446 3245 5.766150 TCGGATTGTAAATGCCTTTATGG 57.234 39.130 0.00 0.00 39.35 2.74
2448 3247 7.581213 TTGATCGGATTGTAAATGCCTTTAT 57.419 32.000 0.00 0.00 0.00 1.40
2449 3248 7.284261 TGATTGATCGGATTGTAAATGCCTTTA 59.716 33.333 0.00 0.00 0.00 1.85
2452 3253 5.132502 TGATTGATCGGATTGTAAATGCCT 58.867 37.500 0.00 0.00 0.00 4.75
2471 3272 8.369424 TGGAGTTTGTGAATGAATCATTTGATT 58.631 29.630 10.09 5.50 46.54 2.57
2474 3275 9.811995 ATATGGAGTTTGTGAATGAATCATTTG 57.188 29.630 10.09 0.00 40.97 2.32
2489 3290 9.832445 ATTACAGTGGTAGTAATATGGAGTTTG 57.168 33.333 0.00 0.00 39.63 2.93
2490 3291 9.832445 CATTACAGTGGTAGTAATATGGAGTTT 57.168 33.333 0.00 0.00 39.46 2.66
2517 3318 6.258727 ACATTGAGAACGTGGCTAATGAATAG 59.741 38.462 17.34 0.00 34.52 1.73
2532 3333 5.514274 TTTGGACCTGAAACATTGAGAAC 57.486 39.130 0.00 0.00 0.00 3.01
2533 3334 7.669304 TCATATTTGGACCTGAAACATTGAGAA 59.331 33.333 0.00 0.00 0.00 2.87
2572 3373 0.902984 TCCGTAAGCTTGGCTCCAGA 60.903 55.000 9.86 0.00 38.25 3.86
2612 3413 1.066929 GGATGCTTGTTTTCCGGCATT 60.067 47.619 0.00 0.00 44.06 3.56
2678 3479 9.248291 AGATTGTGTTAAACTTAATTTGCACTG 57.752 29.630 0.00 0.00 37.87 3.66
2680 3481 9.463443 AGAGATTGTGTTAAACTTAATTTGCAC 57.537 29.630 0.00 0.00 37.69 4.57
2826 3629 1.035932 TAGGGGTCGCTGCTAGACAC 61.036 60.000 9.37 5.82 41.07 3.67
2843 3646 2.496070 TCCGAGGGTCAAGACAACATAG 59.504 50.000 2.29 0.00 0.00 2.23
2900 3704 4.999950 ACTCTGCAAGAATGTCGAAATCTT 59.000 37.500 0.00 0.00 46.34 2.40
2968 3773 3.668447 TCCTTTGATCACTGAAGTCTGC 58.332 45.455 0.00 0.00 0.00 4.26
3036 3841 0.175989 CTTCAGAGGCCCGTACTTCC 59.824 60.000 0.00 0.00 0.00 3.46
3105 3911 6.968400 TTGGCCATAAGATTATATCTGGGA 57.032 37.500 6.09 0.00 40.13 4.37
3294 4100 1.006102 CCGGCCGATCTGTATGTCC 60.006 63.158 30.73 0.00 0.00 4.02
3327 4133 2.098831 GGCGGTTAGAGCGTTGTCC 61.099 63.158 1.44 0.00 41.74 4.02
3557 4377 8.767085 AGTTCAAATTATGTTTGTGATTGCTTG 58.233 29.630 5.62 0.00 0.00 4.01
3559 4379 8.143193 TGAGTTCAAATTATGTTTGTGATTGCT 58.857 29.630 5.62 0.00 0.00 3.91
3598 6139 3.123050 GCATTCACCGAAACTGCTTTTT 58.877 40.909 0.00 0.00 0.00 1.94
3780 6332 6.095377 CACCATTGCTTTCTCTACAATTTCC 58.905 40.000 0.00 0.00 31.82 3.13
3781 6333 6.681777 ACACCATTGCTTTCTCTACAATTTC 58.318 36.000 0.00 0.00 31.82 2.17
3833 6386 4.281182 AGGCCTTGGATATAACTACTGTCG 59.719 45.833 0.00 0.00 0.00 4.35
3838 6391 3.056035 CCGGAGGCCTTGGATATAACTAC 60.056 52.174 17.90 0.00 46.14 2.73
3839 6392 3.170717 CCGGAGGCCTTGGATATAACTA 58.829 50.000 17.90 0.00 46.14 2.24
3840 6393 1.978580 CCGGAGGCCTTGGATATAACT 59.021 52.381 17.90 0.00 46.14 2.24
3858 6413 2.752354 TGACATTGCTTTTACCCATCCG 59.248 45.455 0.00 0.00 0.00 4.18
3873 6428 3.439857 AACAGGTAGGCACATGACATT 57.560 42.857 0.00 0.00 38.76 2.71
3881 6436 7.625828 ACTATCAATAAAAACAGGTAGGCAC 57.374 36.000 0.00 0.00 0.00 5.01
3921 6476 5.468072 TCGCTTAGTAGATAGGTAAACTCCG 59.532 44.000 0.00 0.00 0.00 4.63
3943 6498 2.086054 AGCAGAAACTTGTAGCCTCG 57.914 50.000 0.00 0.00 0.00 4.63
3945 6500 2.353803 CGGTAGCAGAAACTTGTAGCCT 60.354 50.000 0.00 0.00 0.00 4.58
3946 6501 2.000447 CGGTAGCAGAAACTTGTAGCC 59.000 52.381 0.00 0.00 0.00 3.93
3947 6502 2.000447 CCGGTAGCAGAAACTTGTAGC 59.000 52.381 0.00 0.00 0.00 3.58
3964 7413 2.770164 AAAGAACAGAGATCACCCGG 57.230 50.000 0.00 0.00 0.00 5.73
3998 7447 3.868754 GCTGACGGCTTATATAAAGGGGG 60.869 52.174 0.00 0.00 38.06 5.40
4001 7450 2.993899 CGGCTGACGGCTTATATAAAGG 59.006 50.000 6.16 0.00 41.46 3.11
4017 7466 1.134521 TGGCTATGAAACTACCGGCTG 60.135 52.381 0.00 0.00 0.00 4.85
4087 7539 9.561069 ACTATTTCGAGGATTTTATAGTTGCAT 57.439 29.630 0.00 0.00 0.00 3.96
4115 7567 3.417101 TCCATGCACGTAAGGAACAATT 58.583 40.909 0.00 0.00 46.39 2.32
4117 7569 2.552599 TCCATGCACGTAAGGAACAA 57.447 45.000 0.00 0.00 46.39 2.83
4119 7571 4.201881 GGTAATTCCATGCACGTAAGGAAC 60.202 45.833 10.98 2.42 42.42 3.62
4120 7572 3.942748 GGTAATTCCATGCACGTAAGGAA 59.057 43.478 11.11 11.11 43.63 3.36
4122 7574 2.286833 CGGTAATTCCATGCACGTAAGG 59.713 50.000 0.00 0.00 37.71 2.69
4123 7575 3.191669 TCGGTAATTCCATGCACGTAAG 58.808 45.455 0.00 0.00 39.03 2.34
4124 7576 3.248495 TCGGTAATTCCATGCACGTAA 57.752 42.857 0.00 0.00 35.57 3.18
4125 7577 2.963548 TCGGTAATTCCATGCACGTA 57.036 45.000 0.00 0.00 35.57 3.57
4126 7578 2.102070 TTCGGTAATTCCATGCACGT 57.898 45.000 0.00 0.00 35.57 4.49
4127 7579 3.479505 TTTTCGGTAATTCCATGCACG 57.520 42.857 0.00 0.00 35.57 5.34
4129 7596 3.367910 GCCTTTTTCGGTAATTCCATGCA 60.368 43.478 0.00 0.00 35.57 3.96
4143 7610 0.602638 CCGGGGCAAAAGCCTTTTTC 60.603 55.000 0.00 0.00 34.34 2.29
4148 7615 2.600470 GAACCGGGGCAAAAGCCT 60.600 61.111 6.32 0.00 0.00 4.58
4149 7616 4.050934 CGAACCGGGGCAAAAGCC 62.051 66.667 6.32 0.00 0.00 4.35
4151 7618 0.887387 TTCTCGAACCGGGGCAAAAG 60.887 55.000 6.32 0.00 0.00 2.27
4156 7623 1.602377 CATAATTTCTCGAACCGGGGC 59.398 52.381 6.32 0.00 0.00 5.80
4157 7624 2.612212 CACATAATTTCTCGAACCGGGG 59.388 50.000 6.32 0.00 0.00 5.73
4158 7625 3.527533 TCACATAATTTCTCGAACCGGG 58.472 45.455 6.32 0.00 0.00 5.73
4161 7628 6.292381 CGAGGATTCACATAATTTCTCGAACC 60.292 42.308 13.92 0.00 43.50 3.62
4165 7632 5.748630 TGTCGAGGATTCACATAATTTCTCG 59.251 40.000 0.00 0.00 42.58 4.04
4166 7633 7.402640 GTTGTCGAGGATTCACATAATTTCTC 58.597 38.462 0.00 0.00 0.00 2.87
4168 7635 6.458342 GGGTTGTCGAGGATTCACATAATTTC 60.458 42.308 0.00 0.00 0.00 2.17
4169 7636 5.357032 GGGTTGTCGAGGATTCACATAATTT 59.643 40.000 0.00 0.00 0.00 1.82
4170 7637 4.881850 GGGTTGTCGAGGATTCACATAATT 59.118 41.667 0.00 0.00 0.00 1.40
4173 7640 2.159156 CGGGTTGTCGAGGATTCACATA 60.159 50.000 0.00 0.00 0.00 2.29
4175 7642 0.037697 CGGGTTGTCGAGGATTCACA 60.038 55.000 0.00 0.00 0.00 3.58
4178 7645 2.100252 TGTATCGGGTTGTCGAGGATTC 59.900 50.000 0.00 0.00 42.69 2.52
4186 7655 2.096614 CGTGTGTTTGTATCGGGTTGTC 60.097 50.000 0.00 0.00 0.00 3.18
4207 7676 1.087202 TGTGCGTGTGTTGGAGTGTC 61.087 55.000 0.00 0.00 0.00 3.67
4208 7677 1.078778 TGTGCGTGTGTTGGAGTGT 60.079 52.632 0.00 0.00 0.00 3.55
4222 7691 3.357079 CTCGCCTTGGGTGTGTGC 61.357 66.667 0.00 0.00 34.40 4.57
4223 7692 0.249120 TATCTCGCCTTGGGTGTGTG 59.751 55.000 0.00 0.00 34.40 3.82
4272 7741 4.440802 CCTTGTAGCTCTTGTAGTGCTAGG 60.441 50.000 9.89 7.04 44.77 3.02
4293 7762 2.203182 TTCACGGTGGAGGACCCT 59.797 61.111 8.50 0.00 42.62 4.34
4321 7790 0.180642 TATGCGTCTCCGTCTCCTCT 59.819 55.000 0.00 0.00 36.15 3.69
4343 7812 2.357034 TTGGAGCTCACGGTTCGC 60.357 61.111 17.19 0.00 0.00 4.70
4383 7852 0.958382 GCATGCTACGTTCCCCAACA 60.958 55.000 11.37 0.00 32.14 3.33
4384 7853 0.958382 TGCATGCTACGTTCCCCAAC 60.958 55.000 20.33 0.00 0.00 3.77
4385 7854 0.250945 TTGCATGCTACGTTCCCCAA 60.251 50.000 20.33 0.00 0.00 4.12
4386 7855 0.034574 ATTGCATGCTACGTTCCCCA 60.035 50.000 20.33 0.00 0.00 4.96
4387 7856 1.102978 AATTGCATGCTACGTTCCCC 58.897 50.000 20.33 0.00 0.00 4.81
4388 7857 2.163412 TGAAATTGCATGCTACGTTCCC 59.837 45.455 20.33 1.47 0.00 3.97
4389 7858 3.485947 TGAAATTGCATGCTACGTTCC 57.514 42.857 20.33 2.94 0.00 3.62
4390 7859 5.820926 TTTTGAAATTGCATGCTACGTTC 57.179 34.783 20.33 17.52 0.00 3.95
4413 7882 6.543831 AGATCTTGCATAAGCGTAGGATTTTT 59.456 34.615 0.00 0.00 46.23 1.94
4414 7883 6.058183 AGATCTTGCATAAGCGTAGGATTTT 58.942 36.000 0.00 0.00 46.23 1.82
4415 7884 5.615289 AGATCTTGCATAAGCGTAGGATTT 58.385 37.500 0.00 0.00 46.23 2.17
4416 7885 5.220710 AGATCTTGCATAAGCGTAGGATT 57.779 39.130 0.00 0.00 46.23 3.01
4417 7886 4.881019 AGATCTTGCATAAGCGTAGGAT 57.119 40.909 0.00 0.00 46.23 3.24
4418 7887 5.712446 AGATAGATCTTGCATAAGCGTAGGA 59.288 40.000 0.00 0.00 46.23 2.94
4419 7888 5.960113 AGATAGATCTTGCATAAGCGTAGG 58.040 41.667 0.00 0.00 46.23 3.18
4431 7900 7.794240 TGCTATGCATCTCCAAGATAGATCTTG 60.794 40.741 20.72 20.72 46.64 3.02
4432 7901 6.212993 TGCTATGCATCTCCAAGATAGATCTT 59.787 38.462 0.19 0.00 39.70 2.40
4433 7902 5.720520 TGCTATGCATCTCCAAGATAGATCT 59.279 40.000 0.19 0.00 32.12 2.75
4434 7903 5.975282 TGCTATGCATCTCCAAGATAGATC 58.025 41.667 0.19 0.00 32.12 2.75
4435 7904 6.171921 GTTGCTATGCATCTCCAAGATAGAT 58.828 40.000 0.19 0.00 38.76 1.98
4436 7905 5.545588 GTTGCTATGCATCTCCAAGATAGA 58.454 41.667 0.19 0.00 38.76 1.98
4437 7906 4.388165 CGTTGCTATGCATCTCCAAGATAG 59.612 45.833 0.19 0.00 38.76 2.08
4438 7907 4.039124 TCGTTGCTATGCATCTCCAAGATA 59.961 41.667 0.19 0.00 38.76 1.98
4439 7908 3.136763 CGTTGCTATGCATCTCCAAGAT 58.863 45.455 0.19 0.00 38.76 2.40
4440 7909 2.168313 TCGTTGCTATGCATCTCCAAGA 59.832 45.455 0.19 2.93 38.76 3.02
4441 7910 2.543012 CTCGTTGCTATGCATCTCCAAG 59.457 50.000 0.19 0.00 38.76 3.61
4442 7911 2.554142 CTCGTTGCTATGCATCTCCAA 58.446 47.619 0.19 2.27 38.76 3.53
4443 7912 2.229675 CTCGTTGCTATGCATCTCCA 57.770 50.000 0.19 0.00 38.76 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.