Multiple sequence alignment - TraesCS6B01G189600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G189600 chr6B 100.000 6525 0 0 1733 8257 219581096 219574572 0.000000e+00 12050.0
1 TraesCS6B01G189600 chr6B 100.000 1078 0 0 1 1078 219582828 219581751 0.000000e+00 1991.0
2 TraesCS6B01G189600 chr6B 89.573 633 36 5 1 626 559947726 559948335 0.000000e+00 776.0
3 TraesCS6B01G189600 chr6B 93.557 388 13 9 8 392 49967420 49967798 1.200000e-157 568.0
4 TraesCS6B01G189600 chr6B 77.961 363 61 17 80 430 135482843 135483198 8.400000e-50 209.0
5 TraesCS6B01G189600 chr6B 97.143 35 1 0 652 686 559948331 559948365 8.950000e-05 60.2
6 TraesCS6B01G189600 chr6A 93.774 6007 254 58 1736 7712 156743219 156749135 0.000000e+00 8911.0
7 TraesCS6B01G189600 chr6A 88.976 381 18 10 709 1078 156742803 156743170 4.550000e-122 449.0
8 TraesCS6B01G189600 chr6A 90.558 233 22 0 7909 8141 156749289 156749521 8.050000e-80 309.0
9 TraesCS6B01G189600 chr6D 94.712 2969 109 23 4498 7436 124663419 124660469 0.000000e+00 4569.0
10 TraesCS6B01G189600 chr6D 93.363 2667 120 29 1736 4391 124666884 124664264 0.000000e+00 3892.0
11 TraesCS6B01G189600 chr6D 90.984 366 11 9 725 1078 124667288 124666933 2.700000e-129 473.0
12 TraesCS6B01G189600 chr6D 95.000 140 7 0 4358 4497 124664267 124664128 3.880000e-53 220.0
13 TraesCS6B01G189600 chr6D 90.000 90 9 0 7975 8064 124659912 124659823 5.240000e-22 117.0
14 TraesCS6B01G189600 chr2B 91.362 683 36 5 27 709 54333384 54332725 0.000000e+00 913.0
15 TraesCS6B01G189600 chr2B 83.495 618 63 24 24 632 642448896 642449483 2.620000e-149 540.0
16 TraesCS6B01G189600 chr2B 88.636 176 19 1 4529 4704 76912132 76912306 6.490000e-51 213.0
17 TraesCS6B01G189600 chr2B 93.333 120 8 0 591 710 642449486 642449605 2.370000e-40 178.0
18 TraesCS6B01G189600 chr3B 93.346 541 30 4 1 540 56746273 56746808 0.000000e+00 795.0
19 TraesCS6B01G189600 chr3B 92.884 534 33 4 8 540 56737070 56737599 0.000000e+00 771.0
20 TraesCS6B01G189600 chr3B 91.617 167 13 1 538 704 56747026 56747191 6.450000e-56 230.0
21 TraesCS6B01G189600 chr3B 85.714 77 11 0 630 706 56741938 56741862 1.910000e-11 82.4
22 TraesCS6B01G189600 chr7B 86.139 707 67 11 8 710 593067718 593068397 0.000000e+00 734.0
23 TraesCS6B01G189600 chr1B 90.230 174 16 1 4532 4704 436689156 436688983 8.340000e-55 226.0
24 TraesCS6B01G189600 chr2D 90.964 166 15 0 4532 4697 336511299 336511134 3.000000e-54 224.0
25 TraesCS6B01G189600 chr4D 91.358 162 14 0 4536 4697 75266909 75266748 1.080000e-53 222.0
26 TraesCS6B01G189600 chr4D 90.303 165 16 0 4536 4700 36603208 36603044 5.020000e-52 217.0
27 TraesCS6B01G189600 chr4B 91.018 167 12 3 4536 4701 103804479 103804643 1.080000e-53 222.0
28 TraesCS6B01G189600 chr5D 90.303 165 16 0 4533 4697 59947679 59947843 5.020000e-52 217.0
29 TraesCS6B01G189600 chr3A 85.149 202 29 1 7942 8143 430783438 430783238 1.090000e-48 206.0
30 TraesCS6B01G189600 chr2A 89.286 112 9 2 2864 2974 92724344 92724235 4.020000e-28 137.0
31 TraesCS6B01G189600 chr1D 85.593 118 16 1 8016 8133 384882862 384882978 1.130000e-23 122.0
32 TraesCS6B01G189600 chr5A 73.709 213 50 6 7932 8143 546787142 546787349 2.470000e-10 78.7
33 TraesCS6B01G189600 chr1A 91.837 49 4 0 7961 8009 516696091 516696139 1.490000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G189600 chr6B 219574572 219582828 8256 True 7020.5 12050 100.000000 1 8257 2 chr6B.!!$R1 8256
1 TraesCS6B01G189600 chr6B 559947726 559948365 639 False 418.1 776 93.358000 1 686 2 chr6B.!!$F3 685
2 TraesCS6B01G189600 chr6A 156742803 156749521 6718 False 3223.0 8911 91.102667 709 8141 3 chr6A.!!$F1 7432
3 TraesCS6B01G189600 chr6D 124659823 124667288 7465 True 1854.2 4569 92.811800 725 8064 5 chr6D.!!$R1 7339
4 TraesCS6B01G189600 chr2B 54332725 54333384 659 True 913.0 913 91.362000 27 709 1 chr2B.!!$R1 682
5 TraesCS6B01G189600 chr2B 642448896 642449605 709 False 359.0 540 88.414000 24 710 2 chr2B.!!$F2 686
6 TraesCS6B01G189600 chr3B 56737070 56737599 529 False 771.0 771 92.884000 8 540 1 chr3B.!!$F1 532
7 TraesCS6B01G189600 chr3B 56746273 56747191 918 False 512.5 795 92.481500 1 704 2 chr3B.!!$F2 703
8 TraesCS6B01G189600 chr7B 593067718 593068397 679 False 734.0 734 86.139000 8 710 1 chr7B.!!$F1 702

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
910 1227 0.606673 AAGAAAGAAGGCAGCCCGAC 60.607 55.000 8.22 0.00 35.76 4.79 F
938 1255 0.748729 CGTAGACTCGCCTCCTTCCT 60.749 60.000 0.00 0.00 0.00 3.36 F
2515 2845 0.452987 CAGAACCGGCATGATGTTGG 59.547 55.000 0.00 3.97 0.00 3.77 F
2739 3069 1.877443 GCGCAACTCCTTCAGGTAAAA 59.123 47.619 0.30 0.00 36.34 1.52 F
2794 3124 2.556559 GGCCAGGTTACAATTCCCAGAA 60.557 50.000 0.00 0.00 0.00 3.02 F
2796 3126 2.755103 CCAGGTTACAATTCCCAGAAGC 59.245 50.000 0.00 0.00 0.00 3.86 F
4376 4713 2.417651 CGAAATCCACAGCAATGCCAAT 60.418 45.455 0.00 0.00 0.00 3.16 F
4598 5675 0.959553 ATGGACTACATACGGAGCGG 59.040 55.000 0.00 0.00 38.26 5.52 F
4701 5780 1.275573 AGAAACGGAGGGAGTAGTTGC 59.724 52.381 0.00 0.00 0.00 4.17 F
5916 7000 2.324330 TGCGCCATGACTTTGGACG 61.324 57.895 4.18 0.00 39.25 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1794 2112 0.802494 GCTTTCTCGCCGGAATTTCA 59.198 50.000 5.05 0.0 0.00 2.69 R
2703 3033 0.804364 GCGCCATGAGTTGTGAATCA 59.196 50.000 0.00 0.0 0.00 2.57 R
3720 4056 0.689055 ATGACTGCTTCTCCACAGCA 59.311 50.000 0.00 0.0 45.21 4.41 R
4356 4693 2.747396 TTGGCATTGCTGTGGATTTC 57.253 45.000 8.82 0.0 0.00 2.17 R
4366 4703 2.965572 TAAGGCTTGATTGGCATTGC 57.034 45.000 10.69 0.0 35.36 3.56 R
4404 4770 5.854010 TTCAGTCACATGTCTATCCCTAC 57.146 43.478 0.00 0.0 0.00 3.18 R
5505 6589 0.876777 CGTACCCACAACGTTCAGCA 60.877 55.000 0.00 0.0 35.66 4.41 R
6409 7504 0.758734 CTGACACTTCACCACCTCCA 59.241 55.000 0.00 0.0 0.00 3.86 R
6616 7716 8.150827 TGAAGATACCATATTAGAGGGATTGG 57.849 38.462 0.00 0.0 31.54 3.16 R
7882 9140 0.032130 GATGCTCACCGCTTCCGATA 59.968 55.000 0.00 0.0 40.11 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
431 463 8.616942 TGAACTTTTTCATATTCACGACTTTCA 58.383 29.630 0.00 0.00 36.79 2.69
432 464 9.612620 GAACTTTTTCATATTCACGACTTTCAT 57.387 29.630 0.00 0.00 0.00 2.57
490 522 1.069906 GCCGCACTTGTTCTTGTACTG 60.070 52.381 0.00 0.00 0.00 2.74
496 528 3.627577 CACTTGTTCTTGTACTGTTGGCT 59.372 43.478 0.00 0.00 0.00 4.75
502 534 4.521130 TCTTGTACTGTTGGCTCTACTG 57.479 45.455 0.00 0.00 0.00 2.74
558 810 0.767375 AAGGTCGGCCTATGATGCAT 59.233 50.000 10.18 0.00 46.33 3.96
559 811 0.767375 AGGTCGGCCTATGATGCATT 59.233 50.000 6.89 0.00 44.90 3.56
576 828 2.893637 CATTCACCCGAGTTCGAATCT 58.106 47.619 0.00 0.00 43.02 2.40
776 1082 5.456921 TTTCAAGGCAGATATCCTTTCCT 57.543 39.130 0.00 0.00 41.73 3.36
777 1083 4.428294 TCAAGGCAGATATCCTTTCCTG 57.572 45.455 0.00 0.00 41.73 3.86
816 1122 1.215647 CAGCTCCAGGTACGTGGAC 59.784 63.158 28.97 23.97 41.99 4.02
846 1152 4.817517 CCTGGAACGTATTGTCAGTAAGT 58.182 43.478 0.00 0.00 0.00 2.24
848 1154 4.478699 TGGAACGTATTGTCAGTAAGTCG 58.521 43.478 0.00 0.00 0.00 4.18
894 1211 2.972713 ACTCTTTACCACCTCTGCAAGA 59.027 45.455 0.00 0.00 43.69 3.02
910 1227 0.606673 AAGAAAGAAGGCAGCCCGAC 60.607 55.000 8.22 0.00 35.76 4.79
916 1233 2.731691 GAAGGCAGCCCGACTTGACA 62.732 60.000 8.22 0.00 45.82 3.58
936 1253 1.726533 CCCGTAGACTCGCCTCCTTC 61.727 65.000 0.00 0.00 0.00 3.46
937 1254 1.726533 CCGTAGACTCGCCTCCTTCC 61.727 65.000 0.00 0.00 0.00 3.46
938 1255 0.748729 CGTAGACTCGCCTCCTTCCT 60.749 60.000 0.00 0.00 0.00 3.36
939 1256 1.476477 GTAGACTCGCCTCCTTCCTT 58.524 55.000 0.00 0.00 0.00 3.36
940 1257 1.406180 GTAGACTCGCCTCCTTCCTTC 59.594 57.143 0.00 0.00 0.00 3.46
1900 2220 1.000163 TCGATCGGATCTTTAGCTGCC 60.000 52.381 16.41 0.00 0.00 4.85
1986 2306 2.501261 CTGTGATTGCGATCCATGGAT 58.499 47.619 27.66 27.66 37.59 3.41
2076 2396 2.251818 CTTCTTGAGGTGGAGGTGAGA 58.748 52.381 0.00 0.00 0.00 3.27
2112 2433 2.039613 CCTGCTTCAGGTTTCTCTTCCT 59.960 50.000 4.74 0.00 45.82 3.36
2125 2446 2.174639 TCTCTTCCTGGTTTTGCCTTGA 59.825 45.455 0.00 0.00 38.35 3.02
2147 2468 3.381272 ACTGGTTTGACCTCACATTGTTG 59.619 43.478 0.00 0.00 39.58 3.33
2149 2470 2.693074 GGTTTGACCTCACATTGTTGGT 59.307 45.455 10.09 10.09 34.73 3.67
2274 2596 4.521146 GAGTCCATGATGGTGATCTTGTT 58.479 43.478 11.87 0.00 39.03 2.83
2316 2638 5.838531 ATAGGTTCGGTTGTTGTTTTTCA 57.161 34.783 0.00 0.00 0.00 2.69
2336 2658 3.259374 TCAGACATCTCTGGTTGTTCTCC 59.741 47.826 0.00 0.00 43.87 3.71
2355 2677 1.342374 CCAGGGAATTTCTTGAGGGGG 60.342 57.143 0.00 0.00 0.00 5.40
2359 2688 3.864770 AGGGAATTTCTTGAGGGGGTTAT 59.135 43.478 0.00 0.00 0.00 1.89
2366 2695 7.964730 ATTTCTTGAGGGGGTTATATTCCTA 57.035 36.000 0.00 0.00 0.00 2.94
2373 2702 5.544682 AGGGGGTTATATTCCTACTGTTCA 58.455 41.667 0.00 0.00 0.00 3.18
2390 2719 7.918536 ACTGTTCATTATGCCTGATATGATC 57.081 36.000 0.00 0.00 0.00 2.92
2396 2725 8.613922 TCATTATGCCTGATATGATCCTTCTA 57.386 34.615 0.00 0.00 0.00 2.10
2400 2729 5.649265 TGCCTGATATGATCCTTCTAGTCT 58.351 41.667 0.00 0.00 0.00 3.24
2403 2732 6.873076 GCCTGATATGATCCTTCTAGTCTTTG 59.127 42.308 0.00 0.00 0.00 2.77
2432 2761 5.974751 TGACGTCTTGTTTTCTTTTATTGGC 59.025 36.000 17.92 0.00 0.00 4.52
2441 2770 3.306917 TCTTTTATTGGCACGTCGAGA 57.693 42.857 0.00 0.00 0.00 4.04
2468 2798 6.423042 GTTTCTTCTTTGTAGCTGTCAGTTC 58.577 40.000 0.00 0.00 0.00 3.01
2477 2807 8.445275 TTTGTAGCTGTCAGTTCTAATTTTGA 57.555 30.769 0.00 0.00 0.00 2.69
2504 2834 3.501828 TCACAATCACAAATCAGAACCGG 59.498 43.478 0.00 0.00 0.00 5.28
2515 2845 0.452987 CAGAACCGGCATGATGTTGG 59.547 55.000 0.00 3.97 0.00 3.77
2576 2906 2.810439 AAATTTTAGCGCCACTGCAA 57.190 40.000 2.29 0.00 37.32 4.08
2592 2922 4.855388 CACTGCAATGACAATGCTTTCTAC 59.145 41.667 16.16 0.00 44.14 2.59
2593 2923 4.763793 ACTGCAATGACAATGCTTTCTACT 59.236 37.500 16.16 0.00 44.14 2.57
2594 2924 5.939883 ACTGCAATGACAATGCTTTCTACTA 59.060 36.000 16.16 0.00 44.14 1.82
2703 3033 4.320935 GCTTTCCAACAACATATTCGTGGT 60.321 41.667 0.00 0.00 0.00 4.16
2715 3045 5.351465 ACATATTCGTGGTGATTCACAACTC 59.649 40.000 19.58 3.74 36.25 3.01
2739 3069 1.877443 GCGCAACTCCTTCAGGTAAAA 59.123 47.619 0.30 0.00 36.34 1.52
2755 3085 4.893524 AGGTAAAACTTTGCTGGTAGCTTT 59.106 37.500 0.00 0.00 42.97 3.51
2756 3086 4.982295 GGTAAAACTTTGCTGGTAGCTTTG 59.018 41.667 0.00 0.00 42.97 2.77
2794 3124 2.556559 GGCCAGGTTACAATTCCCAGAA 60.557 50.000 0.00 0.00 0.00 3.02
2796 3126 2.755103 CCAGGTTACAATTCCCAGAAGC 59.245 50.000 0.00 0.00 0.00 3.86
2811 3141 4.219288 CCCAGAAGCTAGTTGCAGAAAATT 59.781 41.667 0.00 0.00 45.94 1.82
2815 3145 6.698766 CAGAAGCTAGTTGCAGAAAATTTGTT 59.301 34.615 0.00 0.00 45.94 2.83
2816 3146 7.862372 CAGAAGCTAGTTGCAGAAAATTTGTTA 59.138 33.333 0.00 0.00 45.94 2.41
2820 3150 9.546428 AGCTAGTTGCAGAAAATTTGTTAATTT 57.454 25.926 0.00 0.00 43.41 1.82
2821 3151 9.797473 GCTAGTTGCAGAAAATTTGTTAATTTC 57.203 29.630 0.00 0.00 40.79 2.17
2866 3196 3.855689 AATTTGCAGAATGACCCTTCG 57.144 42.857 0.00 0.00 39.69 3.79
2985 3315 5.904941 AGAAGAGCTTGTGAGTATCTCATG 58.095 41.667 2.80 0.00 42.73 3.07
3032 3366 8.644374 TGGGTGCATTTAAGTCTAAATTAAGT 57.356 30.769 0.00 0.00 35.88 2.24
3167 3501 4.027702 GCAAGTTGCACTTTTCAGTAAACG 60.028 41.667 22.90 0.00 44.26 3.60
3290 3624 5.597813 AAAGTTGAGAACATACGCTTCTG 57.402 39.130 0.00 0.00 0.00 3.02
3441 3777 5.581874 CCATGTTCTTTTTCTTGCTGTGTTT 59.418 36.000 0.00 0.00 0.00 2.83
3444 3780 7.575332 TGTTCTTTTTCTTGCTGTGTTTTAC 57.425 32.000 0.00 0.00 0.00 2.01
3609 3945 4.957296 ACGATAACACCTCTTGACTGTTT 58.043 39.130 0.00 0.00 30.76 2.83
3610 3946 6.092955 ACGATAACACCTCTTGACTGTTTA 57.907 37.500 0.00 0.00 30.76 2.01
3698 4034 6.841781 AGGGATGGCTTATTTAGGTTAGAA 57.158 37.500 0.00 0.00 0.00 2.10
3701 4037 7.004691 GGGATGGCTTATTTAGGTTAGAATGT 58.995 38.462 0.00 0.00 0.00 2.71
3702 4038 7.040409 GGGATGGCTTATTTAGGTTAGAATGTG 60.040 40.741 0.00 0.00 0.00 3.21
3748 4084 4.287067 TGGAGAAGCAGTCATAAGAAGGTT 59.713 41.667 0.00 0.00 0.00 3.50
3749 4085 5.483937 TGGAGAAGCAGTCATAAGAAGGTTA 59.516 40.000 0.00 0.00 0.00 2.85
3983 4320 6.757897 TTCATTGCTTGATCGAAGGTTTAT 57.242 33.333 0.00 0.00 33.34 1.40
3989 4326 8.902540 TTGCTTGATCGAAGGTTTATATACAT 57.097 30.769 0.00 0.00 31.56 2.29
3990 4327 8.310406 TGCTTGATCGAAGGTTTATATACATG 57.690 34.615 0.00 0.00 31.56 3.21
4017 4354 6.385759 TGGACCTTTATTATACTCAGGAGCAA 59.614 38.462 0.00 0.00 0.00 3.91
4093 4430 7.496346 ACTCTACATTCCTATTTCAGTTGGA 57.504 36.000 0.00 0.00 0.00 3.53
4105 4442 7.334671 CCTATTTCAGTTGGACTCTTCCTTAAC 59.665 40.741 0.00 0.00 43.31 2.01
4113 4450 9.102453 AGTTGGACTCTTCCTTAACTTAACTAT 57.898 33.333 0.00 0.00 43.31 2.12
4210 4547 9.900112 AACCTTCCTATCTCTAACATAACCTAT 57.100 33.333 0.00 0.00 0.00 2.57
4366 4703 3.275617 TGGGGTTATCGAAATCCACAG 57.724 47.619 10.49 0.00 0.00 3.66
4376 4713 2.417651 CGAAATCCACAGCAATGCCAAT 60.418 45.455 0.00 0.00 0.00 3.16
4404 4770 7.865707 AGCCTTAAGAATGCTTATCATAAACG 58.134 34.615 3.36 0.00 36.54 3.60
4409 4775 7.730364 AAGAATGCTTATCATAAACGTAGGG 57.270 36.000 0.00 0.00 34.33 3.53
4447 4813 8.420222 ACTGAATATAATGAAGAGTCAGAGTGG 58.580 37.037 5.67 0.00 37.14 4.00
4597 5674 4.166523 CAATATGGACTACATACGGAGCG 58.833 47.826 0.00 0.00 44.41 5.03
4598 5675 0.959553 ATGGACTACATACGGAGCGG 59.040 55.000 0.00 0.00 38.26 5.52
4614 5691 3.982058 GGAGCGGAATAAGTGAATCTACG 59.018 47.826 0.00 0.00 0.00 3.51
4632 5709 8.951954 AATCTACGCTCTAAAATACGTCTATG 57.048 34.615 0.00 0.00 39.78 2.23
4634 5711 7.350467 TCTACGCTCTAAAATACGTCTATGTG 58.650 38.462 0.00 0.00 39.78 3.21
4640 5717 6.811954 TCTAAAATACGTCTATGTGCATCCA 58.188 36.000 0.00 0.00 0.00 3.41
4701 5780 1.275573 AGAAACGGAGGGAGTAGTTGC 59.724 52.381 0.00 0.00 0.00 4.17
4788 5869 5.347907 GTGTTTTATACTCCTGTTCACCTCG 59.652 44.000 0.00 0.00 0.00 4.63
4816 5897 6.690194 TCTTAGTTAGATACCTGACGTTCC 57.310 41.667 0.00 0.00 34.45 3.62
4837 5918 7.453838 GTTCCGAGTACTTGTAATTTGTCATC 58.546 38.462 9.32 0.00 0.00 2.92
4938 6019 8.247562 ACTCTTTAGTAAGTCAGTATGCTTCTG 58.752 37.037 0.00 0.00 34.96 3.02
4949 6030 5.123820 TCAGTATGCTTCTGTTTTACATGCC 59.876 40.000 0.00 0.00 34.76 4.40
5015 6096 7.345691 TGTTGTATGTGGATATGGAAGTCAAT 58.654 34.615 0.00 0.00 0.00 2.57
5269 6353 8.238481 ACACAATCTTATTTTAACATTTGCCG 57.762 30.769 0.00 0.00 0.00 5.69
5290 6374 4.937620 CCGATTGTATCATCTACCCCAATG 59.062 45.833 0.00 0.00 0.00 2.82
5352 6436 3.844657 CGTTTGTGTACTAGCAGTCTACG 59.155 47.826 0.00 0.00 0.00 3.51
5374 6458 9.779237 CTACGAACTAAAAGATATGCAATAACG 57.221 33.333 0.00 0.00 29.06 3.18
5381 6465 9.214957 CTAAAAGATATGCAATAACGGGATACA 57.785 33.333 0.00 0.00 30.82 2.29
5390 6474 8.458573 TGCAATAACGGGATACAGATTTATTT 57.541 30.769 0.00 0.00 39.74 1.40
5416 6500 2.686915 GCTTGATTGCATCCTGCTACTT 59.313 45.455 0.34 0.00 45.31 2.24
5428 6512 6.093495 GCATCCTGCTACTTGTTTTGTATACA 59.907 38.462 0.08 0.08 40.96 2.29
5434 6518 6.311935 TGCTACTTGTTTTGTATACACGATCC 59.688 38.462 4.68 0.00 0.00 3.36
5505 6589 7.120285 CAGTCAACCATCATATCAAAAGACTGT 59.880 37.037 0.00 0.00 42.38 3.55
5594 6678 6.928520 TCTCATATGATCATTCTGCGTGTAT 58.071 36.000 14.65 0.00 0.00 2.29
5658 6742 5.353123 GGAATTTTACTGTACAGGCGAATGA 59.647 40.000 26.12 9.68 0.00 2.57
5693 6777 3.547613 GGAGACATTCGCTGAAATGCATC 60.548 47.826 0.00 0.00 39.72 3.91
5723 6807 6.260714 GCCATGTACAACTGATCACATAATCA 59.739 38.462 0.00 0.00 34.55 2.57
5739 6823 6.639686 CACATAATCAAGTATCATTTGCAGGC 59.360 38.462 0.00 0.00 0.00 4.85
5856 6940 8.466798 AGGTTTGATATTGTAAATTGCTGTACC 58.533 33.333 0.00 0.00 0.00 3.34
5916 7000 2.324330 TGCGCCATGACTTTGGACG 61.324 57.895 4.18 0.00 39.25 4.79
5917 7001 2.325082 GCGCCATGACTTTGGACGT 61.325 57.895 0.00 0.00 39.25 4.34
5990 7075 9.729281 ACTATTTAGCCTAGAGAGACATAGTAC 57.271 37.037 0.00 0.00 0.00 2.73
6071 7159 9.897744 ACAATATGTTGTCTATGTTTCACAAAG 57.102 29.630 1.42 0.00 45.14 2.77
6107 7195 8.773404 TTAAGTTGAATCAGAGCCTTTAGTAC 57.227 34.615 0.00 0.00 0.00 2.73
6127 7215 6.303839 AGTACTTTCTTCAAACCTAATGCCA 58.696 36.000 0.00 0.00 0.00 4.92
6128 7216 6.948309 AGTACTTTCTTCAAACCTAATGCCAT 59.052 34.615 0.00 0.00 0.00 4.40
6180 7268 8.255394 TCATGTAGTGACAGTAATTCACAATG 57.745 34.615 5.36 6.06 45.00 2.82
6311 7406 6.317140 ACATCAGGTAATTGCATGACTAAGTG 59.683 38.462 13.07 9.61 31.81 3.16
6348 7443 3.990469 CGCATCTAACTCACATCCCATAC 59.010 47.826 0.00 0.00 0.00 2.39
6611 7711 5.527582 ACTTCTACAATTTTGCAAGTCTCGT 59.472 36.000 0.00 0.00 0.00 4.18
6616 7716 6.331170 ACAATTTTGCAAGTCTCGTTTTTC 57.669 33.333 0.00 0.00 0.00 2.29
6781 7881 8.778059 TGGTTTTCCTGTAATCATATTAGAGGT 58.222 33.333 17.59 0.00 41.38 3.85
6847 7947 0.165944 GAATCGTCAAAGGCACGTGG 59.834 55.000 18.88 0.00 38.45 4.94
6908 8010 1.865865 AGTTTACTGGTGCTCGTGTG 58.134 50.000 0.00 0.00 0.00 3.82
6909 8011 1.138266 AGTTTACTGGTGCTCGTGTGT 59.862 47.619 0.00 0.00 0.00 3.72
6939 8041 6.589523 CCTTGACTTAGAGAACTGTGATCTTG 59.410 42.308 0.00 0.00 0.00 3.02
6973 8075 5.931441 AGCCTATCGAATTGCTGATTAAC 57.069 39.130 5.29 0.00 31.70 2.01
7031 8133 3.810743 GCTGTAATTCCTCCACAGGTGTT 60.811 47.826 7.28 0.00 41.28 3.32
7657 8763 1.153168 CCAACCAGGCCCGTGATAG 60.153 63.158 0.00 0.00 0.00 2.08
7668 8774 1.404986 CCCGTGATAGGCAGTTTTCGA 60.405 52.381 0.00 0.00 0.00 3.71
7751 8879 1.456892 TCACGTGGGTGTCTGAGGT 60.457 57.895 17.00 0.00 44.68 3.85
7758 8886 2.038557 GTGGGTGTCTGAGGTTGTACAT 59.961 50.000 0.00 0.00 0.00 2.29
7772 8963 1.561076 TGTACATGAGGAGCCATGCTT 59.439 47.619 0.00 0.00 45.79 3.91
7784 8975 0.725784 CCATGCTTGAAACGTCGTGC 60.726 55.000 0.00 0.00 0.00 5.34
7797 8988 1.797025 GTCGTGCTGCTTCCTAAAGT 58.203 50.000 0.00 0.00 34.79 2.66
7807 8998 3.124921 CCTAAAGTGCCGCCACCG 61.125 66.667 0.00 0.00 43.09 4.94
7821 9012 2.282958 ACCGTCGCCCTTCTCTCA 60.283 61.111 0.00 0.00 0.00 3.27
7822 9013 2.182030 CCGTCGCCCTTCTCTCAC 59.818 66.667 0.00 0.00 0.00 3.51
7823 9014 2.182030 CGTCGCCCTTCTCTCACC 59.818 66.667 0.00 0.00 0.00 4.02
7858 9116 7.012232 GGAAAATGAAAATGAAGAAACCAAGCA 59.988 33.333 0.00 0.00 0.00 3.91
7863 9121 8.954950 TGAAAATGAAGAAACCAAGCAAAATA 57.045 26.923 0.00 0.00 0.00 1.40
7874 9132 5.625150 ACCAAGCAAAATACAGAAGTCTCT 58.375 37.500 0.00 0.00 0.00 3.10
7878 9136 7.064016 CCAAGCAAAATACAGAAGTCTCTACTC 59.936 40.741 0.00 0.00 33.75 2.59
7882 9140 7.978975 GCAAAATACAGAAGTCTCTACTCTCAT 59.021 37.037 0.00 0.00 33.75 2.90
7894 9152 1.693627 ACTCTCATATCGGAAGCGGT 58.306 50.000 0.00 0.00 0.00 5.68
7923 9181 1.390463 GAGCGAAGATTTGGACGTCAC 59.610 52.381 18.91 7.49 0.00 3.67
7924 9182 1.144969 GCGAAGATTTGGACGTCACA 58.855 50.000 18.91 10.22 0.00 3.58
7929 9190 1.140052 AGATTTGGACGTCACACACCA 59.860 47.619 18.91 2.06 0.00 4.17
7955 9216 1.072173 CACCAACCTCATCACCTCACA 59.928 52.381 0.00 0.00 0.00 3.58
7956 9217 1.988107 ACCAACCTCATCACCTCACAT 59.012 47.619 0.00 0.00 0.00 3.21
7958 9219 2.290514 CCAACCTCATCACCTCACATGT 60.291 50.000 0.00 0.00 0.00 3.21
7960 9221 4.186926 CAACCTCATCACCTCACATGTAG 58.813 47.826 0.00 0.00 0.00 2.74
7967 9228 1.935873 CACCTCACATGTAGGCATTCG 59.064 52.381 16.66 0.00 37.67 3.34
7993 9254 1.686110 CGGTAAGCCCTCTGTCCCT 60.686 63.158 0.00 0.00 0.00 4.20
7995 9256 0.910088 GGTAAGCCCTCTGTCCCTGT 60.910 60.000 0.00 0.00 0.00 4.00
8049 9310 2.283298 CACATCACACACTAGGCATCC 58.717 52.381 0.00 0.00 0.00 3.51
8064 9325 1.001406 GCATCCAATCTACCTCTCGGG 59.999 57.143 0.00 0.00 41.89 5.14
8069 9330 0.962489 AATCTACCTCTCGGGCATCG 59.038 55.000 0.00 0.00 39.10 3.84
8080 9341 1.729881 GGGCATCGATTTGGCACTC 59.270 57.895 13.76 0.00 43.56 3.51
8096 9357 2.404215 CACTCGATTTAGGCATACCCG 58.596 52.381 0.00 0.00 39.21 5.28
8141 9402 6.747280 CGAATGGGATTGAGTACAATTTTCAC 59.253 38.462 0.00 0.00 45.30 3.18
8142 9403 7.362056 CGAATGGGATTGAGTACAATTTTCACT 60.362 37.037 0.00 0.00 45.30 3.41
8143 9404 6.573664 TGGGATTGAGTACAATTTTCACTG 57.426 37.500 0.00 0.00 45.30 3.66
8144 9405 6.068010 TGGGATTGAGTACAATTTTCACTGT 58.932 36.000 0.00 0.00 45.30 3.55
8145 9406 6.206634 TGGGATTGAGTACAATTTTCACTGTC 59.793 38.462 0.00 0.00 45.30 3.51
8146 9407 6.206634 GGGATTGAGTACAATTTTCACTGTCA 59.793 38.462 0.00 0.00 45.30 3.58
8147 9408 7.301054 GGATTGAGTACAATTTTCACTGTCAG 58.699 38.462 0.00 0.00 45.30 3.51
8148 9409 7.173218 GGATTGAGTACAATTTTCACTGTCAGA 59.827 37.037 6.91 0.00 45.30 3.27
8149 9410 8.627208 ATTGAGTACAATTTTCACTGTCAGAT 57.373 30.769 6.91 0.00 43.17 2.90
8150 9411 7.658179 TGAGTACAATTTTCACTGTCAGATC 57.342 36.000 6.91 0.00 0.00 2.75
8151 9412 6.650807 TGAGTACAATTTTCACTGTCAGATCC 59.349 38.462 6.91 0.00 0.00 3.36
8152 9413 6.533730 AGTACAATTTTCACTGTCAGATCCA 58.466 36.000 6.91 0.00 0.00 3.41
8153 9414 7.170965 AGTACAATTTTCACTGTCAGATCCAT 58.829 34.615 6.91 0.00 0.00 3.41
8154 9415 6.506500 ACAATTTTCACTGTCAGATCCATC 57.493 37.500 6.91 0.00 0.00 3.51
8155 9416 5.416952 ACAATTTTCACTGTCAGATCCATCC 59.583 40.000 6.91 0.00 0.00 3.51
8156 9417 3.634397 TTTCACTGTCAGATCCATCCC 57.366 47.619 6.91 0.00 0.00 3.85
8157 9418 2.252535 TCACTGTCAGATCCATCCCA 57.747 50.000 6.91 0.00 0.00 4.37
8158 9419 2.550175 TCACTGTCAGATCCATCCCAA 58.450 47.619 6.91 0.00 0.00 4.12
8159 9420 2.237143 TCACTGTCAGATCCATCCCAAC 59.763 50.000 6.91 0.00 0.00 3.77
8160 9421 2.026915 CACTGTCAGATCCATCCCAACA 60.027 50.000 6.91 0.00 0.00 3.33
8161 9422 2.644299 ACTGTCAGATCCATCCCAACAA 59.356 45.455 6.91 0.00 0.00 2.83
8162 9423 3.276857 CTGTCAGATCCATCCCAACAAG 58.723 50.000 0.00 0.00 0.00 3.16
8163 9424 2.019984 GTCAGATCCATCCCAACAAGC 58.980 52.381 0.00 0.00 0.00 4.01
8164 9425 1.634973 TCAGATCCATCCCAACAAGCA 59.365 47.619 0.00 0.00 0.00 3.91
8165 9426 1.747355 CAGATCCATCCCAACAAGCAC 59.253 52.381 0.00 0.00 0.00 4.40
8166 9427 1.637553 AGATCCATCCCAACAAGCACT 59.362 47.619 0.00 0.00 0.00 4.40
8167 9428 2.846206 AGATCCATCCCAACAAGCACTA 59.154 45.455 0.00 0.00 0.00 2.74
8168 9429 2.489938 TCCATCCCAACAAGCACTAC 57.510 50.000 0.00 0.00 0.00 2.73
8169 9430 1.702401 TCCATCCCAACAAGCACTACA 59.298 47.619 0.00 0.00 0.00 2.74
8170 9431 2.086869 CCATCCCAACAAGCACTACAG 58.913 52.381 0.00 0.00 0.00 2.74
8171 9432 1.470098 CATCCCAACAAGCACTACAGC 59.530 52.381 0.00 0.00 0.00 4.40
8172 9433 0.250727 TCCCAACAAGCACTACAGCC 60.251 55.000 0.00 0.00 34.23 4.85
8173 9434 0.537143 CCCAACAAGCACTACAGCCA 60.537 55.000 0.00 0.00 34.23 4.75
8174 9435 0.593128 CCAACAAGCACTACAGCCAC 59.407 55.000 0.00 0.00 34.23 5.01
8175 9436 1.308047 CAACAAGCACTACAGCCACA 58.692 50.000 0.00 0.00 34.23 4.17
8176 9437 1.675483 CAACAAGCACTACAGCCACAA 59.325 47.619 0.00 0.00 34.23 3.33
8177 9438 1.308998 ACAAGCACTACAGCCACAAC 58.691 50.000 0.00 0.00 34.23 3.32
8178 9439 0.235665 CAAGCACTACAGCCACAACG 59.764 55.000 0.00 0.00 34.23 4.10
8179 9440 0.105964 AAGCACTACAGCCACAACGA 59.894 50.000 0.00 0.00 34.23 3.85
8180 9441 0.319900 AGCACTACAGCCACAACGAG 60.320 55.000 0.00 0.00 34.23 4.18
8181 9442 1.901650 GCACTACAGCCACAACGAGC 61.902 60.000 0.00 0.00 0.00 5.03
8182 9443 1.004918 ACTACAGCCACAACGAGCC 60.005 57.895 0.00 0.00 0.00 4.70
8183 9444 1.293498 CTACAGCCACAACGAGCCT 59.707 57.895 0.00 0.00 0.00 4.58
8184 9445 1.005037 TACAGCCACAACGAGCCTG 60.005 57.895 0.00 0.00 0.00 4.85
8185 9446 3.730761 CAGCCACAACGAGCCTGC 61.731 66.667 0.00 0.00 0.00 4.85
8186 9447 4.254709 AGCCACAACGAGCCTGCA 62.255 61.111 0.00 0.00 0.00 4.41
8187 9448 3.730761 GCCACAACGAGCCTGCAG 61.731 66.667 6.78 6.78 0.00 4.41
8188 9449 3.052082 CCACAACGAGCCTGCAGG 61.052 66.667 29.34 29.34 38.53 4.85
8219 9480 1.648504 GCGGTAGCCTTTGTAATCGT 58.351 50.000 0.00 0.00 37.42 3.73
8220 9481 1.591619 GCGGTAGCCTTTGTAATCGTC 59.408 52.381 0.00 0.00 37.42 4.20
8221 9482 1.850441 CGGTAGCCTTTGTAATCGTCG 59.150 52.381 0.00 0.00 0.00 5.12
8222 9483 2.478370 CGGTAGCCTTTGTAATCGTCGA 60.478 50.000 0.00 0.00 0.00 4.20
8223 9484 2.856557 GGTAGCCTTTGTAATCGTCGAC 59.143 50.000 5.18 5.18 0.00 4.20
8224 9485 2.005971 AGCCTTTGTAATCGTCGACC 57.994 50.000 10.58 0.00 0.00 4.79
8225 9486 1.549170 AGCCTTTGTAATCGTCGACCT 59.451 47.619 10.58 0.00 0.00 3.85
8226 9487 1.925185 GCCTTTGTAATCGTCGACCTC 59.075 52.381 10.58 0.00 0.00 3.85
8227 9488 2.537401 CCTTTGTAATCGTCGACCTCC 58.463 52.381 10.58 0.00 0.00 4.30
8228 9489 2.094390 CCTTTGTAATCGTCGACCTCCA 60.094 50.000 10.58 0.00 0.00 3.86
8229 9490 3.581755 CTTTGTAATCGTCGACCTCCAA 58.418 45.455 10.58 3.53 0.00 3.53
8230 9491 3.880047 TTGTAATCGTCGACCTCCAAT 57.120 42.857 10.58 0.00 0.00 3.16
8231 9492 3.431922 TGTAATCGTCGACCTCCAATC 57.568 47.619 10.58 0.00 0.00 2.67
8232 9493 2.756207 TGTAATCGTCGACCTCCAATCA 59.244 45.455 10.58 0.00 0.00 2.57
8233 9494 2.295253 AATCGTCGACCTCCAATCAC 57.705 50.000 10.58 0.00 0.00 3.06
8234 9495 1.182667 ATCGTCGACCTCCAATCACA 58.817 50.000 10.58 0.00 0.00 3.58
8235 9496 0.526211 TCGTCGACCTCCAATCACAG 59.474 55.000 10.58 0.00 0.00 3.66
8236 9497 0.243907 CGTCGACCTCCAATCACAGT 59.756 55.000 10.58 0.00 0.00 3.55
8237 9498 1.714794 GTCGACCTCCAATCACAGTG 58.285 55.000 3.51 0.00 0.00 3.66
8238 9499 1.000955 GTCGACCTCCAATCACAGTGT 59.999 52.381 3.51 0.00 0.00 3.55
8239 9500 2.230508 GTCGACCTCCAATCACAGTGTA 59.769 50.000 3.51 0.00 0.00 2.90
8240 9501 2.230508 TCGACCTCCAATCACAGTGTAC 59.769 50.000 0.00 0.00 0.00 2.90
8241 9502 2.607187 GACCTCCAATCACAGTGTACG 58.393 52.381 0.00 0.00 0.00 3.67
8242 9503 1.275291 ACCTCCAATCACAGTGTACGG 59.725 52.381 0.00 0.00 0.00 4.02
8243 9504 1.275291 CCTCCAATCACAGTGTACGGT 59.725 52.381 0.00 0.00 0.00 4.83
8244 9505 2.607187 CTCCAATCACAGTGTACGGTC 58.393 52.381 0.00 0.00 0.00 4.79
8245 9506 1.068125 TCCAATCACAGTGTACGGTCG 60.068 52.381 0.00 0.00 0.00 4.79
8246 9507 0.713883 CAATCACAGTGTACGGTCGC 59.286 55.000 0.00 0.00 0.00 5.19
8247 9508 0.601558 AATCACAGTGTACGGTCGCT 59.398 50.000 0.00 0.00 0.00 4.93
8248 9509 0.601558 ATCACAGTGTACGGTCGCTT 59.398 50.000 0.00 0.00 0.00 4.68
8249 9510 0.318360 TCACAGTGTACGGTCGCTTG 60.318 55.000 0.00 0.00 0.00 4.01
8250 9511 1.006571 ACAGTGTACGGTCGCTTGG 60.007 57.895 0.00 0.00 0.00 3.61
8251 9512 2.048503 AGTGTACGGTCGCTTGGC 60.049 61.111 0.00 0.00 0.00 4.52
8252 9513 2.048503 GTGTACGGTCGCTTGGCT 60.049 61.111 0.00 0.00 0.00 4.75
8253 9514 1.666872 GTGTACGGTCGCTTGGCTT 60.667 57.895 0.00 0.00 0.00 4.35
8254 9515 0.388907 GTGTACGGTCGCTTGGCTTA 60.389 55.000 0.00 0.00 0.00 3.09
8255 9516 0.108992 TGTACGGTCGCTTGGCTTAG 60.109 55.000 0.00 0.00 0.00 2.18
8256 9517 0.804933 GTACGGTCGCTTGGCTTAGG 60.805 60.000 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 51 7.918033 CCAGGAAGAAGAAGAAAAGAAAAGAAC 59.082 37.037 0.00 0.00 0.00 3.01
455 487 0.110823 GCGGCCGCGTCTATTATTTG 60.111 55.000 37.24 0.00 0.00 2.32
490 522 4.252971 TGTGACTTACAGTAGAGCCAAC 57.747 45.455 0.00 0.00 33.42 3.77
496 528 7.450074 ACCATTCATTTGTGACTTACAGTAGA 58.550 34.615 0.00 0.00 41.10 2.59
502 534 5.630680 CAGCAACCATTCATTTGTGACTTAC 59.369 40.000 0.00 0.00 0.00 2.34
549 801 3.466836 GAACTCGGGTGAATGCATCATA 58.533 45.455 0.00 0.00 40.97 2.15
558 810 2.426024 CCTAGATTCGAACTCGGGTGAA 59.574 50.000 0.00 0.00 40.29 3.18
559 811 2.022195 CCTAGATTCGAACTCGGGTGA 58.978 52.381 0.00 0.00 40.29 4.02
576 828 2.875933 CGCAAAAAGGTGTGTTCTCCTA 59.124 45.455 0.00 0.00 36.66 2.94
776 1082 2.113774 CCCAACTCCAGCACAGCA 59.886 61.111 0.00 0.00 0.00 4.41
777 1083 3.368571 GCCCAACTCCAGCACAGC 61.369 66.667 0.00 0.00 0.00 4.40
778 1084 2.674380 GGCCCAACTCCAGCACAG 60.674 66.667 0.00 0.00 0.00 3.66
779 1085 3.177884 AGGCCCAACTCCAGCACA 61.178 61.111 0.00 0.00 0.00 4.57
780 1086 2.360475 GAGGCCCAACTCCAGCAC 60.360 66.667 0.00 0.00 0.00 4.40
816 1122 2.567564 ATACGTTCCAGGCCGTTCGG 62.568 60.000 9.01 6.90 38.43 4.30
874 1191 3.685139 TCTTGCAGAGGTGGTAAAGAG 57.315 47.619 0.00 0.00 0.00 2.85
894 1211 0.890996 CAAGTCGGGCTGCCTTCTTT 60.891 55.000 19.68 5.97 0.00 2.52
910 1227 0.456312 GCGAGTCTACGGGTGTCAAG 60.456 60.000 0.00 0.00 0.00 3.02
916 1233 2.439883 GGAGGCGAGTCTACGGGT 60.440 66.667 0.00 0.00 0.00 5.28
936 1253 0.547712 TGGACAGAGGGAAGGGAAGG 60.548 60.000 0.00 0.00 0.00 3.46
937 1254 0.615850 GTGGACAGAGGGAAGGGAAG 59.384 60.000 0.00 0.00 0.00 3.46
938 1255 0.104672 TGTGGACAGAGGGAAGGGAA 60.105 55.000 0.00 0.00 0.00 3.97
939 1256 0.545309 CTGTGGACAGAGGGAAGGGA 60.545 60.000 0.04 0.00 46.59 4.20
940 1257 1.986413 CTGTGGACAGAGGGAAGGG 59.014 63.158 0.04 0.00 46.59 3.95
966 1283 1.120530 TTGGAATCGCCTAGTCCTCC 58.879 55.000 2.34 0.00 43.07 4.30
967 1284 1.202545 GGTTGGAATCGCCTAGTCCTC 60.203 57.143 2.34 0.00 43.07 3.71
1748 2065 3.129871 CGAATTTTGGCCAAAGAAGCAA 58.870 40.909 28.79 15.18 0.00 3.91
1787 2105 3.187058 CCGGAATTTCACGGCCTG 58.813 61.111 0.00 0.00 43.96 4.85
1794 2112 0.802494 GCTTTCTCGCCGGAATTTCA 59.198 50.000 5.05 0.00 0.00 2.69
1796 2114 1.644786 CCGCTTTCTCGCCGGAATTT 61.645 55.000 5.05 0.00 44.55 1.82
1827 2147 3.140814 GGGGAGTGAATTGCGGGC 61.141 66.667 0.00 0.00 0.00 6.13
1900 2220 2.610694 CCAAGACACCGCAGCTGTG 61.611 63.158 20.56 20.56 39.63 3.66
1912 2232 3.125316 CACGATTCTAGCCAAACCAAGAC 59.875 47.826 0.00 0.00 0.00 3.01
1986 2306 1.514678 AAAGCCGCACAGATTTCGCA 61.515 50.000 0.00 0.00 0.00 5.10
2092 2413 3.415457 AGGAAGAGAAACCTGAAGCAG 57.585 47.619 0.00 0.00 34.99 4.24
2112 2433 1.859302 AACCAGTCAAGGCAAAACCA 58.141 45.000 0.00 0.00 43.14 3.67
2125 2446 3.297134 ACAATGTGAGGTCAAACCAGT 57.703 42.857 0.00 0.00 41.95 4.00
2147 2468 1.358759 CGCACAGACACCCAAAACC 59.641 57.895 0.00 0.00 0.00 3.27
2149 2470 1.380403 CCACGCACAGACACCCAAAA 61.380 55.000 0.00 0.00 0.00 2.44
2193 2515 2.353406 GCCATTGAAATGAAGCAGCTGT 60.353 45.455 16.64 0.00 38.70 4.40
2274 2596 6.045459 ACCTATTATTGGAGGCAACCATCATA 59.955 38.462 0.00 0.00 39.82 2.15
2316 2638 3.242867 TGGAGAACAACCAGAGATGTCT 58.757 45.455 0.00 0.00 33.22 3.41
2336 2658 1.359130 ACCCCCTCAAGAAATTCCCTG 59.641 52.381 0.00 0.00 0.00 4.45
2355 2677 9.726438 AGGCATAATGAACAGTAGGAATATAAC 57.274 33.333 0.00 0.00 0.00 1.89
2359 2688 7.373617 TCAGGCATAATGAACAGTAGGAATA 57.626 36.000 0.00 0.00 0.00 1.75
2366 2695 6.883217 GGATCATATCAGGCATAATGAACAGT 59.117 38.462 0.00 0.00 0.00 3.55
2373 2702 8.621126 ACTAGAAGGATCATATCAGGCATAAT 57.379 34.615 0.00 0.00 0.00 1.28
2390 2719 3.369147 CGTCACATGCAAAGACTAGAAGG 59.631 47.826 12.68 0.00 0.00 3.46
2396 2725 2.533266 AGACGTCACATGCAAAGACT 57.467 45.000 19.50 0.00 0.00 3.24
2400 2729 3.773860 AAACAAGACGTCACATGCAAA 57.226 38.095 19.50 0.00 0.00 3.68
2403 2732 3.609103 AGAAAACAAGACGTCACATGC 57.391 42.857 19.50 0.62 0.00 4.06
2432 2761 2.947852 AGAAGAAACCATCTCGACGTG 58.052 47.619 0.00 0.00 37.42 4.49
2441 2770 5.376625 TGACAGCTACAAAGAAGAAACCAT 58.623 37.500 0.00 0.00 0.00 3.55
2477 2807 8.777413 CGGTTCTGATTTGTGATTGTGATATAT 58.223 33.333 0.00 0.00 0.00 0.86
2502 2832 2.028420 TCTCTTCCAACATCATGCCG 57.972 50.000 0.00 0.00 0.00 5.69
2504 2834 2.686405 TGCATCTCTTCCAACATCATGC 59.314 45.455 0.00 0.00 36.51 4.06
2552 2882 4.097741 TGCAGTGGCGCTAAAATTTATGAT 59.902 37.500 7.64 0.00 45.35 2.45
2555 2885 4.448537 TTGCAGTGGCGCTAAAATTTAT 57.551 36.364 7.64 0.00 45.35 1.40
2557 2887 2.810439 TTGCAGTGGCGCTAAAATTT 57.190 40.000 7.64 0.00 45.35 1.82
2566 2896 1.074319 GCATTGTCATTGCAGTGGCG 61.074 55.000 9.39 0.00 45.35 5.69
2703 3033 0.804364 GCGCCATGAGTTGTGAATCA 59.196 50.000 0.00 0.00 0.00 2.57
2715 3045 1.651240 CCTGAAGGAGTTGCGCCATG 61.651 60.000 4.18 0.00 37.39 3.66
2739 3069 3.287222 TCAACAAAGCTACCAGCAAAGT 58.713 40.909 0.38 0.00 45.56 2.66
2794 3124 9.546428 AAATTAACAAATTTTCTGCAACTAGCT 57.454 25.926 0.00 0.00 45.94 3.32
2811 3141 6.590292 TCGGTGCAAACAAAAGAAATTAACAA 59.410 30.769 0.00 0.00 0.00 2.83
2815 3145 8.519526 AGATATCGGTGCAAACAAAAGAAATTA 58.480 29.630 0.00 0.00 0.00 1.40
2816 3146 7.378181 AGATATCGGTGCAAACAAAAGAAATT 58.622 30.769 0.00 0.00 0.00 1.82
2820 3150 5.957842 AAGATATCGGTGCAAACAAAAGA 57.042 34.783 0.00 0.00 0.00 2.52
2821 3151 7.406799 AAAAAGATATCGGTGCAAACAAAAG 57.593 32.000 0.00 0.00 0.00 2.27
2831 3161 8.909708 TTCTGCAAATTAAAAAGATATCGGTG 57.090 30.769 0.00 0.00 0.00 4.94
2866 3196 2.019984 CCAAGGATGGCTTGAGCTAAC 58.980 52.381 2.66 0.00 40.58 2.34
3032 3366 9.877178 GAGACTTAAGAAAATCTGAGTGGATTA 57.123 33.333 10.09 0.00 35.19 1.75
3084 3418 1.410153 CAGAAAGGTGCAAGTTGCCTT 59.590 47.619 24.59 17.73 44.23 4.35
3085 3419 1.035139 CAGAAAGGTGCAAGTTGCCT 58.965 50.000 24.59 12.73 44.23 4.75
3086 3420 0.598419 GCAGAAAGGTGCAAGTTGCC 60.598 55.000 24.59 15.34 44.23 4.52
3098 3432 0.825010 AGGTGCAACTGGGCAGAAAG 60.825 55.000 1.66 0.00 45.96 2.62
3167 3501 5.460646 TCGATTCAGAAAAGTGCAATTTCC 58.539 37.500 13.16 0.00 37.47 3.13
3224 3558 8.478775 AAAATAACTATCAGGGGGAAAATAGC 57.521 34.615 0.00 0.00 0.00 2.97
3267 3601 5.560953 GCAGAAGCGTATGTTCTCAACTTTT 60.561 40.000 0.00 0.00 31.64 2.27
3268 3602 4.083802 GCAGAAGCGTATGTTCTCAACTTT 60.084 41.667 0.00 0.00 31.64 2.66
3290 3624 3.691049 TGCTATGGAATTAACGCAAGC 57.309 42.857 0.00 0.00 45.62 4.01
3505 3841 8.573885 CATCAAATGGATCAGCATACAATAAGT 58.426 33.333 0.00 0.00 32.57 2.24
3588 3924 7.435488 CCTATAAACAGTCAAGAGGTGTTATCG 59.565 40.741 0.00 0.00 33.25 2.92
3599 3935 8.986847 CATATGAGAAGCCTATAAACAGTCAAG 58.013 37.037 0.00 0.00 0.00 3.02
3609 3945 6.127703 GCCTCGTAACATATGAGAAGCCTATA 60.128 42.308 10.38 0.00 43.02 1.31
3610 3946 5.336849 GCCTCGTAACATATGAGAAGCCTAT 60.337 44.000 10.38 0.00 43.02 2.57
3720 4056 0.689055 ATGACTGCTTCTCCACAGCA 59.311 50.000 0.00 0.00 45.21 4.41
3784 4120 7.954835 TGAATGAAAGATGAGGACAACAATTT 58.045 30.769 0.00 0.00 0.00 1.82
3989 4326 7.635089 GCTCCTGAGTATAATAAAGGTCCAACA 60.635 40.741 0.00 0.00 0.00 3.33
3990 4327 6.706716 GCTCCTGAGTATAATAAAGGTCCAAC 59.293 42.308 0.00 0.00 0.00 3.77
4121 4458 8.778059 TGGATACAGTTGGGTCTATTAGAATTT 58.222 33.333 0.00 0.00 46.17 1.82
4122 4459 8.331931 TGGATACAGTTGGGTCTATTAGAATT 57.668 34.615 0.00 0.00 46.17 2.17
4123 4460 7.931015 TGGATACAGTTGGGTCTATTAGAAT 57.069 36.000 0.00 0.00 46.17 2.40
4218 4555 9.809096 CAGCAAGAGATAAACATATCCGTATAT 57.191 33.333 0.00 0.00 0.00 0.86
4223 4560 6.219473 AGACAGCAAGAGATAAACATATCCG 58.781 40.000 0.00 0.00 0.00 4.18
4234 4571 3.051081 GTCCACAAGACAGCAAGAGAT 57.949 47.619 0.00 0.00 45.55 2.75
4356 4693 2.747396 TTGGCATTGCTGTGGATTTC 57.253 45.000 8.82 0.00 0.00 2.17
4366 4703 2.965572 TAAGGCTTGATTGGCATTGC 57.034 45.000 10.69 0.00 35.36 3.56
4404 4770 5.854010 TTCAGTCACATGTCTATCCCTAC 57.146 43.478 0.00 0.00 0.00 3.18
4478 4844 8.204160 AGCAGAAGTTACATACTTACATGCATA 58.796 33.333 0.00 0.00 47.00 3.14
4597 5674 8.644318 TTTTAGAGCGTAGATTCACTTATTCC 57.356 34.615 0.00 0.00 0.00 3.01
4614 5691 6.128795 GGATGCACATAGACGTATTTTAGAGC 60.129 42.308 0.00 0.00 0.00 4.09
4632 5709 7.154656 TCAATACAGACTACATATGGATGCAC 58.845 38.462 7.80 0.00 36.43 4.57
4634 5711 8.607441 TTTCAATACAGACTACATATGGATGC 57.393 34.615 7.80 0.00 36.43 3.91
4788 5869 5.921408 CGTCAGGTATCTAACTAAGATTGCC 59.079 44.000 0.00 0.00 42.62 4.52
4816 5897 6.811665 TCTGGATGACAAATTACAAGTACTCG 59.188 38.462 0.00 0.00 0.00 4.18
4837 5918 5.353123 CCAATTTTCATCAATGCCTTTCTGG 59.647 40.000 0.00 0.00 39.35 3.86
5134 6218 8.484214 AAGTCCATACAAGCTCTCTGATAATA 57.516 34.615 0.00 0.00 0.00 0.98
5136 6220 6.798427 AAGTCCATACAAGCTCTCTGATAA 57.202 37.500 0.00 0.00 0.00 1.75
5259 6343 6.017109 GGTAGATGATACAATCGGCAAATGTT 60.017 38.462 0.00 0.00 0.00 2.71
5352 6436 8.149973 TCCCGTTATTGCATATCTTTTAGTTC 57.850 34.615 0.00 0.00 0.00 3.01
5374 6458 9.507329 TCAAGCATCTAAATAAATCTGTATCCC 57.493 33.333 0.00 0.00 0.00 3.85
5405 6489 6.312918 CGTGTATACAAAACAAGTAGCAGGAT 59.687 38.462 7.25 0.00 0.00 3.24
5416 6500 5.813672 GCTAAGGGATCGTGTATACAAAACA 59.186 40.000 7.25 0.00 0.00 2.83
5428 6512 4.906618 TGAAAGAAAAGCTAAGGGATCGT 58.093 39.130 0.00 0.00 0.00 3.73
5434 6518 6.183360 GCCTGTAGATGAAAGAAAAGCTAAGG 60.183 42.308 0.00 0.00 0.00 2.69
5505 6589 0.876777 CGTACCCACAACGTTCAGCA 60.877 55.000 0.00 0.00 35.66 4.41
5658 6742 5.065731 GCGAATGTCTCCAGAGAATGATTTT 59.934 40.000 0.00 0.00 39.48 1.82
5693 6777 2.127271 TCAGTTGTACATGGCATGGG 57.873 50.000 29.49 7.85 33.60 4.00
5723 6807 5.102953 TGAGTAGCCTGCAAATGATACTT 57.897 39.130 9.11 0.00 0.00 2.24
5739 6823 2.224018 GCTGATCAAGGAGCCTGAGTAG 60.224 54.545 0.00 0.00 0.00 2.57
5856 6940 4.568152 AGGACTGGAAATTTTGACGTTG 57.432 40.909 0.00 0.00 0.00 4.10
5916 7000 5.801350 TGACTCAAATAGCATTACAGCAC 57.199 39.130 0.00 0.00 36.85 4.40
5917 7001 6.598850 TCAATGACTCAAATAGCATTACAGCA 59.401 34.615 0.00 0.00 33.18 4.41
6107 7195 9.736023 GTTATATGGCATTAGGTTTGAAGAAAG 57.264 33.333 4.78 0.00 0.00 2.62
6158 7246 5.994668 TGCATTGTGAATTACTGTCACTACA 59.005 36.000 6.17 0.00 44.70 2.74
6180 7268 4.644103 ATCTGTCCAAACATAGCAATGC 57.356 40.909 0.00 0.00 36.50 3.56
6311 7406 6.480320 AGTTAGATGCGATGACTTATTCCAAC 59.520 38.462 0.00 0.00 0.00 3.77
6348 7443 4.208355 CGTTGGATAACAAAACGTGTCAG 58.792 43.478 0.00 0.00 40.60 3.51
6409 7504 0.758734 CTGACACTTCACCACCTCCA 59.241 55.000 0.00 0.00 0.00 3.86
6550 7646 9.890629 GAATATATAGGGATGTTCAGTATTGCA 57.109 33.333 0.00 0.00 29.85 4.08
6611 7711 9.807921 GATACCATATTAGAGGGATTGGAAAAA 57.192 33.333 0.00 0.00 31.54 1.94
6616 7716 8.150827 TGAAGATACCATATTAGAGGGATTGG 57.849 38.462 0.00 0.00 31.54 3.16
6847 7947 0.615331 TGGCACATCAGGAGTCTTCC 59.385 55.000 0.00 0.00 44.39 3.46
6939 8041 7.798982 GCAATTCGATAGGCTAAAAGTTATCAC 59.201 37.037 0.00 0.00 0.00 3.06
6973 8075 2.554032 AGGAAATCAAAGTTGGTCGCAG 59.446 45.455 0.00 0.00 0.00 5.18
7308 8411 2.700371 TCTCCTTGATCAGTGTGTGTGT 59.300 45.455 0.00 0.00 0.00 3.72
7309 8412 3.391506 TCTCCTTGATCAGTGTGTGTG 57.608 47.619 0.00 0.00 0.00 3.82
7359 8462 3.380142 CCTGTATTTGCCACACACAAAC 58.620 45.455 0.00 0.00 39.65 2.93
7465 8571 4.362932 TTTCGATTGTGTTTGCACTCAA 57.637 36.364 0.00 0.00 45.44 3.02
7541 8647 7.656542 TGCTTTGCAATAGATTGATTTTGTTCA 59.343 29.630 0.00 0.00 40.14 3.18
7657 8763 0.379316 ACAAACGGTCGAAAACTGCC 59.621 50.000 0.00 0.00 37.83 4.85
7666 8772 1.298788 GGGTGCAAACAAACGGTCG 60.299 57.895 0.00 0.00 0.00 4.79
7668 8774 1.671901 CCAGGGTGCAAACAAACGGT 61.672 55.000 0.00 0.00 0.00 4.83
7751 8879 1.561076 AGCATGGCTCCTCATGTACAA 59.439 47.619 0.00 0.00 44.54 2.41
7758 8886 1.538047 GTTTCAAGCATGGCTCCTCA 58.462 50.000 0.00 0.00 38.25 3.86
7772 8963 1.495584 GGAAGCAGCACGACGTTTCA 61.496 55.000 0.00 0.00 0.00 2.69
7784 8975 1.648467 GGCGGCACTTTAGGAAGCAG 61.648 60.000 3.07 0.00 36.29 4.24
7807 8998 2.182030 CGGTGAGAGAAGGGCGAC 59.818 66.667 0.00 0.00 0.00 5.19
7810 9001 2.185608 GAGCGGTGAGAGAAGGGC 59.814 66.667 0.00 0.00 0.00 5.19
7814 9005 1.587043 CCGAGTGAGCGGTGAGAGAA 61.587 60.000 0.00 0.00 46.07 2.87
7823 9014 3.536158 TTTTCATTTTCCGAGTGAGCG 57.464 42.857 0.00 0.00 0.00 5.03
7863 9121 5.995282 CCGATATGAGAGTAGAGACTTCTGT 59.005 44.000 0.00 0.00 35.45 3.41
7874 9132 2.552743 CACCGCTTCCGATATGAGAGTA 59.447 50.000 0.00 0.00 36.29 2.59
7878 9136 1.932604 GCTCACCGCTTCCGATATGAG 60.933 57.143 0.00 0.00 39.55 2.90
7882 9140 0.032130 GATGCTCACCGCTTCCGATA 59.968 55.000 0.00 0.00 40.11 2.92
7884 9142 2.184322 GATGCTCACCGCTTCCGA 59.816 61.111 0.00 0.00 40.11 4.55
7894 9152 0.461548 AATCTTCGCTCCGATGCTCA 59.538 50.000 0.00 0.00 35.23 4.26
7923 9181 1.086696 GGTTGGTGATCGATGGTGTG 58.913 55.000 0.54 0.00 0.00 3.82
7924 9182 0.984230 AGGTTGGTGATCGATGGTGT 59.016 50.000 0.54 0.00 0.00 4.16
7929 9190 2.158900 GGTGATGAGGTTGGTGATCGAT 60.159 50.000 0.00 0.00 0.00 3.59
7955 9216 1.949525 GCCATTGACGAATGCCTACAT 59.050 47.619 0.00 0.00 38.14 2.29
7956 9217 1.378531 GCCATTGACGAATGCCTACA 58.621 50.000 0.00 0.00 38.14 2.74
7958 9219 0.813610 CCGCCATTGACGAATGCCTA 60.814 55.000 0.00 0.00 38.14 3.93
7960 9221 1.092921 TACCGCCATTGACGAATGCC 61.093 55.000 0.00 0.00 38.14 4.40
7993 9254 4.278170 GGCCATGATAAATCGATTCCAACA 59.722 41.667 11.83 7.97 0.00 3.33
7995 9256 3.501828 CGGCCATGATAAATCGATTCCAA 59.498 43.478 11.83 0.57 0.00 3.53
8002 9263 2.725759 CGAATGCGGCCATGATAAATCG 60.726 50.000 2.24 0.00 0.00 3.34
8064 9325 2.383170 TCGAGTGCCAAATCGATGC 58.617 52.632 0.00 0.00 42.61 3.91
8069 9330 2.682856 TGCCTAAATCGAGTGCCAAATC 59.317 45.455 0.00 0.00 0.00 2.17
8080 9341 4.181578 CCTAATCGGGTATGCCTAAATCG 58.818 47.826 0.00 0.00 34.45 3.34
8096 9357 6.598753 TTCGAATCGTTCAAATCCCTAATC 57.401 37.500 1.52 0.00 0.00 1.75
8110 9371 3.543680 ACTCAATCCCATTCGAATCGT 57.456 42.857 7.92 0.00 0.00 3.73
8141 9402 3.276857 CTTGTTGGGATGGATCTGACAG 58.723 50.000 0.00 0.00 0.00 3.51
8142 9403 2.618816 GCTTGTTGGGATGGATCTGACA 60.619 50.000 0.00 0.00 0.00 3.58
8143 9404 2.019984 GCTTGTTGGGATGGATCTGAC 58.980 52.381 0.00 0.00 0.00 3.51
8144 9405 1.634973 TGCTTGTTGGGATGGATCTGA 59.365 47.619 0.00 0.00 0.00 3.27
8145 9406 1.747355 GTGCTTGTTGGGATGGATCTG 59.253 52.381 0.00 0.00 0.00 2.90
8146 9407 1.637553 AGTGCTTGTTGGGATGGATCT 59.362 47.619 0.00 0.00 0.00 2.75
8147 9408 2.134789 AGTGCTTGTTGGGATGGATC 57.865 50.000 0.00 0.00 0.00 3.36
8148 9409 2.308570 TGTAGTGCTTGTTGGGATGGAT 59.691 45.455 0.00 0.00 0.00 3.41
8149 9410 1.702401 TGTAGTGCTTGTTGGGATGGA 59.298 47.619 0.00 0.00 0.00 3.41
8150 9411 2.086869 CTGTAGTGCTTGTTGGGATGG 58.913 52.381 0.00 0.00 0.00 3.51
8151 9412 1.470098 GCTGTAGTGCTTGTTGGGATG 59.530 52.381 0.00 0.00 0.00 3.51
8152 9413 1.614317 GGCTGTAGTGCTTGTTGGGAT 60.614 52.381 0.00 0.00 0.00 3.85
8153 9414 0.250727 GGCTGTAGTGCTTGTTGGGA 60.251 55.000 0.00 0.00 0.00 4.37
8154 9415 0.537143 TGGCTGTAGTGCTTGTTGGG 60.537 55.000 0.00 0.00 0.00 4.12
8155 9416 0.593128 GTGGCTGTAGTGCTTGTTGG 59.407 55.000 0.00 0.00 0.00 3.77
8156 9417 1.308047 TGTGGCTGTAGTGCTTGTTG 58.692 50.000 0.00 0.00 0.00 3.33
8157 9418 1.676006 GTTGTGGCTGTAGTGCTTGTT 59.324 47.619 0.00 0.00 0.00 2.83
8158 9419 1.308998 GTTGTGGCTGTAGTGCTTGT 58.691 50.000 0.00 0.00 0.00 3.16
8159 9420 0.235665 CGTTGTGGCTGTAGTGCTTG 59.764 55.000 0.00 0.00 0.00 4.01
8160 9421 0.105964 TCGTTGTGGCTGTAGTGCTT 59.894 50.000 0.00 0.00 0.00 3.91
8161 9422 0.319900 CTCGTTGTGGCTGTAGTGCT 60.320 55.000 0.00 0.00 0.00 4.40
8162 9423 1.901650 GCTCGTTGTGGCTGTAGTGC 61.902 60.000 0.00 0.00 0.00 4.40
8163 9424 1.291877 GGCTCGTTGTGGCTGTAGTG 61.292 60.000 0.00 0.00 0.00 2.74
8164 9425 1.004918 GGCTCGTTGTGGCTGTAGT 60.005 57.895 0.00 0.00 0.00 2.73
8165 9426 1.293498 AGGCTCGTTGTGGCTGTAG 59.707 57.895 0.00 0.00 38.92 2.74
8166 9427 3.466881 AGGCTCGTTGTGGCTGTA 58.533 55.556 0.00 0.00 38.92 2.74
8169 9430 4.254709 TGCAGGCTCGTTGTGGCT 62.255 61.111 0.00 0.00 41.11 4.75
8170 9431 3.730761 CTGCAGGCTCGTTGTGGC 61.731 66.667 5.57 0.00 0.00 5.01
8171 9432 3.052082 CCTGCAGGCTCGTTGTGG 61.052 66.667 22.33 0.00 0.00 4.17
8200 9461 1.591619 GACGATTACAAAGGCTACCGC 59.408 52.381 0.00 0.00 0.00 5.68
8201 9462 1.850441 CGACGATTACAAAGGCTACCG 59.150 52.381 0.00 0.00 0.00 4.02
8202 9463 2.856557 GTCGACGATTACAAAGGCTACC 59.143 50.000 0.00 0.00 0.00 3.18
8203 9464 2.856557 GGTCGACGATTACAAAGGCTAC 59.143 50.000 9.92 0.00 0.00 3.58
8204 9465 2.756760 AGGTCGACGATTACAAAGGCTA 59.243 45.455 9.92 0.00 0.00 3.93
8205 9466 1.549170 AGGTCGACGATTACAAAGGCT 59.451 47.619 9.92 0.00 0.00 4.58
8206 9467 1.925185 GAGGTCGACGATTACAAAGGC 59.075 52.381 9.92 0.00 0.00 4.35
8207 9468 2.094390 TGGAGGTCGACGATTACAAAGG 60.094 50.000 9.92 0.00 0.00 3.11
8208 9469 3.226346 TGGAGGTCGACGATTACAAAG 57.774 47.619 9.92 0.00 0.00 2.77
8209 9470 3.663995 TTGGAGGTCGACGATTACAAA 57.336 42.857 9.92 0.00 0.00 2.83
8210 9471 3.193903 TGATTGGAGGTCGACGATTACAA 59.806 43.478 9.92 11.03 0.00 2.41
8211 9472 2.756207 TGATTGGAGGTCGACGATTACA 59.244 45.455 9.92 1.66 0.00 2.41
8212 9473 3.114065 GTGATTGGAGGTCGACGATTAC 58.886 50.000 9.92 0.00 0.00 1.89
8213 9474 2.756207 TGTGATTGGAGGTCGACGATTA 59.244 45.455 9.92 0.00 0.00 1.75
8214 9475 1.548719 TGTGATTGGAGGTCGACGATT 59.451 47.619 9.92 0.00 0.00 3.34
8215 9476 1.135139 CTGTGATTGGAGGTCGACGAT 59.865 52.381 9.92 0.00 0.00 3.73
8216 9477 0.526211 CTGTGATTGGAGGTCGACGA 59.474 55.000 9.92 0.00 0.00 4.20
8217 9478 0.243907 ACTGTGATTGGAGGTCGACG 59.756 55.000 9.92 0.00 0.00 5.12
8218 9479 1.000955 ACACTGTGATTGGAGGTCGAC 59.999 52.381 15.86 7.13 0.00 4.20
8219 9480 1.338107 ACACTGTGATTGGAGGTCGA 58.662 50.000 15.86 0.00 0.00 4.20
8220 9481 2.607187 GTACACTGTGATTGGAGGTCG 58.393 52.381 15.86 0.00 0.00 4.79
8221 9482 2.607187 CGTACACTGTGATTGGAGGTC 58.393 52.381 15.86 0.00 0.00 3.85
8222 9483 1.275291 CCGTACACTGTGATTGGAGGT 59.725 52.381 15.86 0.00 0.00 3.85
8223 9484 1.275291 ACCGTACACTGTGATTGGAGG 59.725 52.381 15.86 10.58 0.00 4.30
8224 9485 2.607187 GACCGTACACTGTGATTGGAG 58.393 52.381 15.86 0.68 0.00 3.86
8225 9486 1.068125 CGACCGTACACTGTGATTGGA 60.068 52.381 15.86 0.00 0.00 3.53
8226 9487 1.346365 CGACCGTACACTGTGATTGG 58.654 55.000 15.86 13.98 0.00 3.16
8227 9488 0.713883 GCGACCGTACACTGTGATTG 59.286 55.000 15.86 3.03 0.00 2.67
8228 9489 0.601558 AGCGACCGTACACTGTGATT 59.398 50.000 15.86 0.00 0.00 2.57
8229 9490 0.601558 AAGCGACCGTACACTGTGAT 59.398 50.000 15.86 1.48 0.00 3.06
8230 9491 0.318360 CAAGCGACCGTACACTGTGA 60.318 55.000 15.86 0.00 0.00 3.58
8231 9492 1.282248 CCAAGCGACCGTACACTGTG 61.282 60.000 6.19 6.19 0.00 3.66
8232 9493 1.006571 CCAAGCGACCGTACACTGT 60.007 57.895 0.00 0.00 0.00 3.55
8233 9494 2.380410 GCCAAGCGACCGTACACTG 61.380 63.158 0.00 0.00 0.00 3.66
8234 9495 2.048503 GCCAAGCGACCGTACACT 60.049 61.111 0.00 0.00 0.00 3.55
8235 9496 0.388907 TAAGCCAAGCGACCGTACAC 60.389 55.000 0.00 0.00 0.00 2.90
8236 9497 0.108992 CTAAGCCAAGCGACCGTACA 60.109 55.000 0.00 0.00 0.00 2.90
8237 9498 0.804933 CCTAAGCCAAGCGACCGTAC 60.805 60.000 0.00 0.00 0.00 3.67
8238 9499 1.514087 CCTAAGCCAAGCGACCGTA 59.486 57.895 0.00 0.00 0.00 4.02
8239 9500 2.264794 CCTAAGCCAAGCGACCGT 59.735 61.111 0.00 0.00 0.00 4.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.