Multiple sequence alignment - TraesCS6B01G186200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G186200 chr6B 100.000 5756 0 0 1 5756 212412518 212418273 0.000000e+00 10630.0
1 TraesCS6B01G186200 chr6B 93.156 263 16 2 1580 1841 134106923 134106662 9.050000e-103 385.0
2 TraesCS6B01G186200 chr6B 83.004 253 37 4 2981 3228 64326100 64326351 2.090000e-54 224.0
3 TraesCS6B01G186200 chr6B 84.810 79 12 0 5229 5307 473358 473280 4.780000e-11 80.5
4 TraesCS6B01G186200 chr6B 91.304 46 4 0 5259 5304 234109474 234109429 4.810000e-06 63.9
5 TraesCS6B01G186200 chr6D 95.013 1865 51 9 1819 3648 120673927 120672070 0.000000e+00 2891.0
6 TraesCS6B01G186200 chr6D 94.201 776 20 11 3830 4585 120672078 120671308 0.000000e+00 1160.0
7 TraesCS6B01G186200 chr6D 94.745 609 29 3 4620 5227 120671310 120670704 0.000000e+00 944.0
8 TraesCS6B01G186200 chr6D 89.566 738 44 14 865 1586 120674631 120673911 0.000000e+00 905.0
9 TraesCS6B01G186200 chr6D 87.958 382 23 4 5375 5756 120670547 120670189 4.120000e-116 429.0
10 TraesCS6B01G186200 chr6D 96.226 53 2 0 752 804 120676546 120676494 2.860000e-13 87.9
11 TraesCS6B01G186200 chr6A 94.762 1852 58 11 1836 3648 158946712 158944861 0.000000e+00 2846.0
12 TraesCS6B01G186200 chr6A 90.724 1423 55 32 3830 5227 158944869 158943499 0.000000e+00 1825.0
13 TraesCS6B01G186200 chr6A 90.411 657 33 7 944 1573 158947377 158946724 0.000000e+00 837.0
14 TraesCS6B01G186200 chr6A 87.050 417 41 8 5341 5756 158943408 158943004 5.260000e-125 459.0
15 TraesCS6B01G186200 chr6A 94.094 254 14 1 1582 1835 29206445 29206697 9.050000e-103 385.0
16 TraesCS6B01G186200 chr6A 81.174 494 63 16 2760 3228 35181565 35182053 2.530000e-98 370.0
17 TraesCS6B01G186200 chr6A 86.709 316 33 6 4087 4395 286424089 286424402 5.520000e-90 342.0
18 TraesCS6B01G186200 chr6A 85.259 251 31 3 3401 3648 286423439 286423686 2.660000e-63 254.0
19 TraesCS6B01G186200 chr6A 85.214 257 21 6 3830 4072 286423678 286423931 1.240000e-61 248.0
20 TraesCS6B01G186200 chr6A 88.667 150 14 2 3437 3586 35146113 35146259 4.580000e-41 180.0
21 TraesCS6B01G186200 chr6A 83.663 202 14 2 752 953 159729222 159729404 7.670000e-39 172.0
22 TraesCS6B01G186200 chr6A 95.000 80 2 1 2370 2449 286423356 286423433 2.180000e-24 124.0
23 TraesCS6B01G186200 chr6A 84.783 92 11 2 3322 3410 35146017 35146108 7.940000e-14 89.8
24 TraesCS6B01G186200 chr6A 100.000 38 0 0 5303 5340 158943462 158943425 2.880000e-08 71.3
25 TraesCS6B01G186200 chr1D 88.816 760 75 6 3 756 235161634 235160879 0.000000e+00 924.0
26 TraesCS6B01G186200 chr3D 87.403 643 79 2 3 644 485235175 485235816 0.000000e+00 737.0
27 TraesCS6B01G186200 chr3D 90.296 371 30 5 1822 2191 420473006 420472641 1.120000e-131 481.0
28 TraesCS6B01G186200 chr3D 90.191 367 31 4 1826 2191 513861180 513861542 1.880000e-129 473.0
29 TraesCS6B01G186200 chr3D 87.549 257 15 4 3830 4072 420472325 420472072 1.220000e-71 281.0
30 TraesCS6B01G186200 chr3D 86.454 251 25 6 3401 3648 420472561 420472317 3.420000e-67 267.0
31 TraesCS6B01G186200 chr3D 85.657 251 27 7 3401 3648 513861622 513861866 7.400000e-64 255.0
32 TraesCS6B01G186200 chr3D 94.898 98 5 0 3830 3927 513861858 513861955 2.780000e-33 154.0
33 TraesCS6B01G186200 chr3D 87.302 126 13 2 3944 4069 513874358 513874480 2.160000e-29 141.0
34 TraesCS6B01G186200 chr3D 90.698 86 6 1 2370 2455 420472644 420472561 4.710000e-21 113.0
35 TraesCS6B01G186200 chr3D 92.500 80 4 1 2370 2449 513861539 513861616 4.710000e-21 113.0
36 TraesCS6B01G186200 chr5B 79.973 734 136 9 3 733 6495607 6496332 1.100000e-146 531.0
37 TraesCS6B01G186200 chr5B 93.870 261 13 3 1582 1841 320410913 320411171 1.940000e-104 390.0
38 TraesCS6B01G186200 chr5B 92.776 263 18 1 1580 1841 532841471 532841733 4.210000e-101 379.0
39 TraesCS6B01G186200 chr2D 79.864 735 138 9 9 739 226338585 226337857 3.950000e-146 529.0
40 TraesCS6B01G186200 chr2D 93.103 261 16 2 1582 1841 6675308 6675049 1.170000e-101 381.0
41 TraesCS6B01G186200 chrUn 83.023 483 46 19 2759 3231 103113370 103113826 6.940000e-109 405.0
42 TraesCS6B01G186200 chrUn 79.845 387 50 14 2763 3126 103129715 103130096 2.060000e-64 257.0
43 TraesCS6B01G186200 chrUn 78.816 321 54 9 3989 4303 103132836 103133148 2.720000e-48 204.0
44 TraesCS6B01G186200 chrUn 83.582 201 16 8 3387 3582 103113871 103114059 7.670000e-39 172.0
45 TraesCS6B01G186200 chrUn 94.444 36 2 0 5270 5305 91456134 91456099 8.060000e-04 56.5
46 TraesCS6B01G186200 chrUn 100.000 29 0 0 3325 3353 103113829 103113857 3.000000e-03 54.7
47 TraesCS6B01G186200 chr5A 93.487 261 16 1 1582 1841 60095739 60095999 2.520000e-103 387.0
48 TraesCS6B01G186200 chr5A 93.156 263 17 1 1580 1841 549293894 549293632 9.050000e-103 385.0
49 TraesCS6B01G186200 chr4B 92.830 265 16 3 1578 1841 612711496 612711758 1.170000e-101 381.0
50 TraesCS6B01G186200 chr4B 94.286 35 2 0 5270 5304 639084976 639084942 3.000000e-03 54.7
51 TraesCS6B01G186200 chr2A 92.453 265 18 2 1578 1841 777285753 777285490 1.510000e-100 377.0
52 TraesCS6B01G186200 chr7B 84.661 339 34 9 4070 4395 616810757 616811090 7.190000e-84 322.0
53 TraesCS6B01G186200 chr7B 87.352 253 19 7 3830 4072 616810374 616810623 1.580000e-70 278.0
54 TraesCS6B01G186200 chr7B 84.436 257 28 5 3401 3648 616810129 616810382 5.760000e-60 243.0
55 TraesCS6B01G186200 chr7B 92.857 84 6 0 2108 2191 616809966 616810049 7.830000e-24 122.0
56 TraesCS6B01G186200 chr7B 93.750 80 3 1 2370 2449 616810046 616810123 1.010000e-22 119.0
57 TraesCS6B01G186200 chr7B 90.196 51 3 2 5258 5307 49017627 49017676 1.340000e-06 65.8
58 TraesCS6B01G186200 chr4A 80.992 121 23 0 417 537 519177470 519177350 4.750000e-16 97.1
59 TraesCS6B01G186200 chr3B 85.526 76 11 0 5229 5304 114578692 114578617 4.780000e-11 80.5
60 TraesCS6B01G186200 chr2B 84.416 77 11 1 5229 5304 385161199 385161275 2.220000e-09 75.0
61 TraesCS6B01G186200 chr5D 94.595 37 2 0 5269 5305 465697442 465697406 2.240000e-04 58.4
62 TraesCS6B01G186200 chr7A 86.275 51 5 2 5258 5307 98536827 98536876 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G186200 chr6B 212412518 212418273 5755 False 10630.000000 10630 100.000000 1 5756 1 chr6B.!!$F2 5755
1 TraesCS6B01G186200 chr6D 120670189 120676546 6357 True 1069.483333 2891 92.951500 752 5756 6 chr6D.!!$R1 5004
2 TraesCS6B01G186200 chr6A 158943004 158947377 4373 True 1207.660000 2846 92.589400 944 5756 5 chr6A.!!$R1 4812
3 TraesCS6B01G186200 chr6A 286423356 286424402 1046 False 242.000000 342 88.045500 2370 4395 4 chr6A.!!$F5 2025
4 TraesCS6B01G186200 chr1D 235160879 235161634 755 True 924.000000 924 88.816000 3 756 1 chr1D.!!$R1 753
5 TraesCS6B01G186200 chr3D 485235175 485235816 641 False 737.000000 737 87.403000 3 644 1 chr3D.!!$F1 641
6 TraesCS6B01G186200 chr3D 420472072 420473006 934 True 285.500000 481 88.749250 1822 4072 4 chr3D.!!$R1 2250
7 TraesCS6B01G186200 chr3D 513861180 513861955 775 False 248.750000 473 90.811500 1826 3927 4 chr3D.!!$F3 2101
8 TraesCS6B01G186200 chr5B 6495607 6496332 725 False 531.000000 531 79.973000 3 733 1 chr5B.!!$F1 730
9 TraesCS6B01G186200 chr2D 226337857 226338585 728 True 529.000000 529 79.864000 9 739 1 chr2D.!!$R2 730
10 TraesCS6B01G186200 chrUn 103129715 103133148 3433 False 230.500000 257 79.330500 2763 4303 2 chrUn.!!$F2 1540
11 TraesCS6B01G186200 chrUn 103113370 103114059 689 False 210.566667 405 88.868333 2759 3582 3 chrUn.!!$F1 823
12 TraesCS6B01G186200 chr7B 616809966 616811090 1124 False 216.800000 322 88.611200 2108 4395 5 chr7B.!!$F2 2287

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
853 2687 0.035458 TCCACACACACACACACACA 59.965 50.000 0.00 0.00 0.00 3.72 F
854 2688 0.167908 CCACACACACACACACACAC 59.832 55.000 0.00 0.00 0.00 3.82 F
1376 3243 0.385598 TATAGCGACGACTGCGATGC 60.386 55.000 0.00 0.00 41.64 3.91 F
2901 4833 0.318360 TGTGCTGGAACACTCGTACG 60.318 55.000 9.53 9.53 41.30 3.67 F
3713 5814 1.343789 TGTGCAACATGGGGATTTGTG 59.656 47.619 0.00 0.00 45.67 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2706 4617 1.406887 GGCTTGCCTCGGAATAGAACA 60.407 52.381 4.11 0.0 0.0 3.18 R
2901 4833 5.028549 TCCTACCAGAAGATGCAGAAATC 57.971 43.478 0.00 0.0 0.0 2.17 R
3411 5461 2.675603 GCGGTGTTTGGTTTCCTTGTTT 60.676 45.455 0.00 0.0 0.0 2.83 R
3719 5820 0.916845 GCCCCTTCCTCCCTCTTTCT 60.917 60.000 0.00 0.0 0.0 2.52 R
5259 9563 0.384974 CGCGCCGCTTTCAAGTAAAA 60.385 50.000 7.78 0.0 0.0 1.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.795110 GCTCTCCTCGCAGCCAGAT 61.795 63.158 0.00 0.00 0.00 2.90
33 34 1.674764 CTCTCCTCGCAGCCAGATGT 61.675 60.000 0.00 0.00 0.00 3.06
44 45 3.243636 GCAGCCAGATGTTATTCATTGGG 60.244 47.826 0.00 0.00 36.83 4.12
109 110 2.580322 TGGCTTGTTTGAGGGATCCATA 59.420 45.455 15.23 0.00 0.00 2.74
150 151 2.840038 TCATGTGGAAGTCTGGTGCTAT 59.160 45.455 0.00 0.00 0.00 2.97
174 175 3.138304 TGTCGGTGAAATTCTTCCTGTG 58.862 45.455 0.00 0.00 0.00 3.66
202 203 0.521735 CTTTAAACCGCTGCTGGTCC 59.478 55.000 14.68 0.00 42.89 4.46
304 305 0.550914 TCCTTGTGGGCTGTGTCTTT 59.449 50.000 0.00 0.00 34.39 2.52
348 349 1.402984 GCTCTCCTTGTGTCGAACGAT 60.403 52.381 0.00 0.00 0.00 3.73
406 407 4.200283 CTGTCCGCCGCTCTCCTC 62.200 72.222 0.00 0.00 0.00 3.71
452 453 1.602237 CTCACTACCATGGCCGGTT 59.398 57.895 13.04 0.00 40.67 4.44
453 454 0.462047 CTCACTACCATGGCCGGTTC 60.462 60.000 13.04 0.00 40.67 3.62
480 481 2.045708 GGACAATGTGGCGCCATCA 61.046 57.895 35.23 29.91 0.00 3.07
588 589 1.467920 GGAGCCAAAGGACTGAATGG 58.532 55.000 0.00 0.00 36.00 3.16
641 642 2.483538 GGCTGAGCATCCTCTTTCTCTC 60.484 54.545 6.82 0.00 38.93 3.20
643 644 3.033184 CTGAGCATCCTCTTTCTCTCCT 58.967 50.000 0.00 0.00 38.93 3.69
663 664 1.446099 GCTCACTTGATCGCCACGA 60.446 57.895 0.00 0.00 41.13 4.35
673 674 3.645975 CGCCACGAACACGCCTTT 61.646 61.111 0.00 0.00 0.00 3.11
675 676 2.251642 GCCACGAACACGCCTTTCT 61.252 57.895 0.00 0.00 0.00 2.52
698 699 2.957489 CGTGAACGTGGCGTGACA 60.957 61.111 0.00 0.00 39.99 3.58
708 709 1.459592 GTGGCGTGACACTGTATGTTC 59.540 52.381 3.68 0.00 43.56 3.18
710 711 2.559231 TGGCGTGACACTGTATGTTCTA 59.441 45.455 3.68 0.00 43.56 2.10
713 714 4.421058 GCGTGACACTGTATGTTCTATCA 58.579 43.478 3.68 0.00 43.56 2.15
716 717 5.739630 CGTGACACTGTATGTTCTATCACTC 59.260 44.000 3.68 0.00 43.56 3.51
734 735 9.702494 CTATCACTCTATCAATGCAAAGATACA 57.298 33.333 7.22 0.00 0.00 2.29
748 752 7.847096 TGCAAAGATACACTCTTAGTATTCCA 58.153 34.615 0.00 0.00 43.60 3.53
749 753 8.318412 TGCAAAGATACACTCTTAGTATTCCAA 58.682 33.333 0.00 0.00 43.60 3.53
844 2678 6.874134 AGAACAAGTATATTCTCCACACACAC 59.126 38.462 0.00 0.00 28.79 3.82
845 2679 6.109156 ACAAGTATATTCTCCACACACACA 57.891 37.500 0.00 0.00 0.00 3.72
846 2680 5.932303 ACAAGTATATTCTCCACACACACAC 59.068 40.000 0.00 0.00 0.00 3.82
847 2681 5.738619 AGTATATTCTCCACACACACACA 57.261 39.130 0.00 0.00 0.00 3.72
848 2682 5.479306 AGTATATTCTCCACACACACACAC 58.521 41.667 0.00 0.00 0.00 3.82
849 2683 2.708216 ATTCTCCACACACACACACA 57.292 45.000 0.00 0.00 0.00 3.72
850 2684 1.732941 TTCTCCACACACACACACAC 58.267 50.000 0.00 0.00 0.00 3.82
851 2685 0.610687 TCTCCACACACACACACACA 59.389 50.000 0.00 0.00 0.00 3.72
852 2686 0.726827 CTCCACACACACACACACAC 59.273 55.000 0.00 0.00 0.00 3.82
853 2687 0.035458 TCCACACACACACACACACA 59.965 50.000 0.00 0.00 0.00 3.72
854 2688 0.167908 CCACACACACACACACACAC 59.832 55.000 0.00 0.00 0.00 3.82
855 2689 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
856 2690 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
857 2691 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
858 2692 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
859 2693 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
860 2694 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
861 2695 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
862 2696 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
863 2697 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
864 2698 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
865 2699 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
866 2700 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
867 2701 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
868 2702 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
869 2703 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
870 2704 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
871 2705 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
872 2706 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
975 2809 1.423921 GGAGGAAAACAACAGGGAGGA 59.576 52.381 0.00 0.00 0.00 3.71
1093 2930 3.283684 CGATCCTCGCTCTCCGCT 61.284 66.667 0.00 0.00 36.73 5.52
1185 3022 3.857038 TACCCGAAGATGGCCGCC 61.857 66.667 1.04 1.04 0.00 6.13
1368 3235 6.075918 TCGTAGATTGAATTATAGCGACGAC 58.924 40.000 0.00 0.00 31.33 4.34
1372 3239 2.381589 TGAATTATAGCGACGACTGCG 58.618 47.619 0.00 0.00 44.79 5.18
1373 3240 2.032426 TGAATTATAGCGACGACTGCGA 59.968 45.455 0.00 0.00 41.64 5.10
1374 3241 2.991434 ATTATAGCGACGACTGCGAT 57.009 45.000 0.00 0.00 41.64 4.58
1375 3242 2.032414 TTATAGCGACGACTGCGATG 57.968 50.000 0.00 0.00 41.64 3.84
1376 3243 0.385598 TATAGCGACGACTGCGATGC 60.386 55.000 0.00 0.00 41.64 3.91
1377 3244 3.643933 TATAGCGACGACTGCGATGCC 62.644 57.143 0.00 0.00 40.26 4.40
1454 3321 0.536233 TGCCGTGCTGGTTAATGTGT 60.536 50.000 0.00 0.00 41.21 3.72
1456 3323 1.807742 GCCGTGCTGGTTAATGTGTTA 59.192 47.619 0.00 0.00 41.21 2.41
1465 3332 5.470777 GCTGGTTAATGTGTTACCAACTACA 59.529 40.000 0.00 0.00 0.00 2.74
1484 3351 2.297880 ACAGGTTTAATTGGTTTCCGGC 59.702 45.455 0.00 0.00 0.00 6.13
1596 3464 4.654091 CCTTTAAGGGCATGTACAATGG 57.346 45.455 2.44 0.00 0.00 3.16
1597 3465 4.023291 CCTTTAAGGGCATGTACAATGGT 58.977 43.478 2.44 0.00 0.00 3.55
1598 3466 4.466015 CCTTTAAGGGCATGTACAATGGTT 59.534 41.667 2.44 0.00 0.00 3.67
1599 3467 5.398603 TTTAAGGGCATGTACAATGGTTG 57.601 39.130 0.00 0.00 0.00 3.77
1600 3468 2.897271 AGGGCATGTACAATGGTTGA 57.103 45.000 0.00 0.00 0.00 3.18
1601 3469 3.386932 AGGGCATGTACAATGGTTGAT 57.613 42.857 0.00 0.00 0.00 2.57
1602 3470 4.518278 AGGGCATGTACAATGGTTGATA 57.482 40.909 0.00 0.00 0.00 2.15
1603 3471 4.865905 AGGGCATGTACAATGGTTGATAA 58.134 39.130 0.00 0.00 0.00 1.75
1604 3472 4.889409 AGGGCATGTACAATGGTTGATAAG 59.111 41.667 0.00 0.00 0.00 1.73
1605 3473 4.887071 GGGCATGTACAATGGTTGATAAGA 59.113 41.667 0.00 0.00 0.00 2.10
1606 3474 5.536161 GGGCATGTACAATGGTTGATAAGAT 59.464 40.000 0.00 0.00 0.00 2.40
1607 3475 6.714810 GGGCATGTACAATGGTTGATAAGATA 59.285 38.462 0.00 0.00 0.00 1.98
1608 3476 7.094634 GGGCATGTACAATGGTTGATAAGATAG 60.095 40.741 0.00 0.00 0.00 2.08
1609 3477 7.445402 GGCATGTACAATGGTTGATAAGATAGT 59.555 37.037 0.00 0.00 0.00 2.12
1610 3478 8.499162 GCATGTACAATGGTTGATAAGATAGTC 58.501 37.037 0.00 0.00 0.00 2.59
1611 3479 9.770097 CATGTACAATGGTTGATAAGATAGTCT 57.230 33.333 0.00 0.00 0.00 3.24
1629 3497 9.979578 AGATAGTCTTATCTTAAGTCTTGCATG 57.020 33.333 1.63 0.00 42.67 4.06
1630 3498 9.757227 GATAGTCTTATCTTAAGTCTTGCATGT 57.243 33.333 1.63 0.00 34.16 3.21
1645 3513 9.836864 AGTCTTGCATGTAATTTAGATATGACA 57.163 29.630 0.00 0.00 0.00 3.58
1672 3540 9.471702 AAAAAGAATGTCTACAATGGATCATCT 57.528 29.630 0.00 0.00 0.00 2.90
1673 3541 8.674263 AAAGAATGTCTACAATGGATCATCTC 57.326 34.615 0.00 0.00 0.00 2.75
1674 3542 7.615039 AGAATGTCTACAATGGATCATCTCT 57.385 36.000 0.00 0.00 0.00 3.10
1675 3543 8.032045 AGAATGTCTACAATGGATCATCTCTT 57.968 34.615 0.00 0.00 0.00 2.85
1676 3544 9.152327 AGAATGTCTACAATGGATCATCTCTTA 57.848 33.333 0.00 0.00 0.00 2.10
1677 3545 9.421806 GAATGTCTACAATGGATCATCTCTTAG 57.578 37.037 0.00 0.00 0.00 2.18
1678 3546 6.753180 TGTCTACAATGGATCATCTCTTAGC 58.247 40.000 0.00 0.00 0.00 3.09
1679 3547 6.552725 TGTCTACAATGGATCATCTCTTAGCT 59.447 38.462 0.00 0.00 0.00 3.32
1680 3548 7.070447 TGTCTACAATGGATCATCTCTTAGCTT 59.930 37.037 0.00 0.00 0.00 3.74
1681 3549 7.930865 GTCTACAATGGATCATCTCTTAGCTTT 59.069 37.037 0.00 0.00 0.00 3.51
1682 3550 9.147732 TCTACAATGGATCATCTCTTAGCTTTA 57.852 33.333 0.00 0.00 0.00 1.85
1683 3551 9.941325 CTACAATGGATCATCTCTTAGCTTTAT 57.059 33.333 0.00 0.00 0.00 1.40
1684 3552 8.845413 ACAATGGATCATCTCTTAGCTTTATC 57.155 34.615 0.00 0.00 0.00 1.75
1685 3553 8.658619 ACAATGGATCATCTCTTAGCTTTATCT 58.341 33.333 0.00 0.00 0.00 1.98
1686 3554 9.504708 CAATGGATCATCTCTTAGCTTTATCTT 57.495 33.333 0.00 0.00 0.00 2.40
1687 3555 9.723601 AATGGATCATCTCTTAGCTTTATCTTC 57.276 33.333 0.00 0.00 0.00 2.87
1688 3556 8.255111 TGGATCATCTCTTAGCTTTATCTTCA 57.745 34.615 0.00 0.00 0.00 3.02
1689 3557 8.708378 TGGATCATCTCTTAGCTTTATCTTCAA 58.292 33.333 0.00 0.00 0.00 2.69
1690 3558 9.723601 GGATCATCTCTTAGCTTTATCTTCAAT 57.276 33.333 0.00 0.00 0.00 2.57
1716 3584 7.865706 ACTAGCTATTCCTAAAAACATGGTG 57.134 36.000 0.00 0.00 0.00 4.17
1717 3585 7.630082 ACTAGCTATTCCTAAAAACATGGTGA 58.370 34.615 0.00 0.00 0.00 4.02
1718 3586 7.770897 ACTAGCTATTCCTAAAAACATGGTGAG 59.229 37.037 0.00 0.00 0.00 3.51
1719 3587 6.721318 AGCTATTCCTAAAAACATGGTGAGA 58.279 36.000 0.00 0.00 0.00 3.27
1720 3588 6.599638 AGCTATTCCTAAAAACATGGTGAGAC 59.400 38.462 0.00 0.00 0.00 3.36
1721 3589 6.374333 GCTATTCCTAAAAACATGGTGAGACA 59.626 38.462 0.00 0.00 0.00 3.41
1722 3590 7.067494 GCTATTCCTAAAAACATGGTGAGACAT 59.933 37.037 0.00 0.00 0.00 3.06
1723 3591 9.613428 CTATTCCTAAAAACATGGTGAGACATA 57.387 33.333 0.00 0.00 0.00 2.29
1725 3593 8.877864 TTCCTAAAAACATGGTGAGACATATT 57.122 30.769 0.00 0.00 0.00 1.28
1726 3594 8.279970 TCCTAAAAACATGGTGAGACATATTG 57.720 34.615 0.00 0.00 0.00 1.90
1727 3595 7.888021 TCCTAAAAACATGGTGAGACATATTGT 59.112 33.333 0.00 0.00 0.00 2.71
1728 3596 7.970061 CCTAAAAACATGGTGAGACATATTGTG 59.030 37.037 0.00 0.00 0.00 3.33
1729 3597 4.970662 AACATGGTGAGACATATTGTGC 57.029 40.909 0.00 0.00 0.00 4.57
1730 3598 4.226427 ACATGGTGAGACATATTGTGCT 57.774 40.909 0.00 0.00 0.00 4.40
1731 3599 5.357742 ACATGGTGAGACATATTGTGCTA 57.642 39.130 0.00 0.00 0.00 3.49
1732 3600 5.744171 ACATGGTGAGACATATTGTGCTAA 58.256 37.500 0.00 0.00 0.00 3.09
1733 3601 5.819379 ACATGGTGAGACATATTGTGCTAAG 59.181 40.000 0.00 0.00 0.00 2.18
1734 3602 5.675684 TGGTGAGACATATTGTGCTAAGA 57.324 39.130 0.00 0.00 0.00 2.10
1735 3603 5.664457 TGGTGAGACATATTGTGCTAAGAG 58.336 41.667 0.00 0.00 0.00 2.85
1736 3604 5.422012 TGGTGAGACATATTGTGCTAAGAGA 59.578 40.000 0.00 0.00 0.00 3.10
1737 3605 6.098838 TGGTGAGACATATTGTGCTAAGAGAT 59.901 38.462 0.00 0.00 0.00 2.75
1738 3606 6.644592 GGTGAGACATATTGTGCTAAGAGATC 59.355 42.308 0.00 0.00 0.00 2.75
1739 3607 7.205992 GTGAGACATATTGTGCTAAGAGATCA 58.794 38.462 0.00 0.00 0.00 2.92
1740 3608 7.871973 GTGAGACATATTGTGCTAAGAGATCAT 59.128 37.037 0.00 0.00 0.00 2.45
1741 3609 8.087136 TGAGACATATTGTGCTAAGAGATCATC 58.913 37.037 0.00 0.00 0.00 2.92
1742 3610 8.192743 AGACATATTGTGCTAAGAGATCATCT 57.807 34.615 0.00 0.00 41.27 2.90
1743 3611 8.306038 AGACATATTGTGCTAAGAGATCATCTC 58.694 37.037 6.55 6.55 43.70 2.75
1775 3643 9.975218 TTCTCTTAAATAAGATAAGGCAAACCT 57.025 29.630 3.49 0.00 44.20 3.50
1776 3644 9.975218 TCTCTTAAATAAGATAAGGCAAACCTT 57.025 29.630 3.49 2.45 46.21 3.50
1791 3659 7.408132 GGCAAACCTTTTCTTATGAGTTTTC 57.592 36.000 0.00 0.00 0.00 2.29
1792 3660 7.210174 GGCAAACCTTTTCTTATGAGTTTTCT 58.790 34.615 0.00 0.00 0.00 2.52
1793 3661 7.382488 GGCAAACCTTTTCTTATGAGTTTTCTC 59.618 37.037 0.00 0.00 46.33 2.87
1794 3662 8.138074 GCAAACCTTTTCTTATGAGTTTTCTCT 58.862 33.333 0.00 0.00 46.30 3.10
1795 3663 9.670719 CAAACCTTTTCTTATGAGTTTTCTCTC 57.329 33.333 0.00 0.00 46.30 3.20
1796 3664 7.987750 ACCTTTTCTTATGAGTTTTCTCTCC 57.012 36.000 0.00 0.00 46.30 3.71
1797 3665 7.750655 ACCTTTTCTTATGAGTTTTCTCTCCT 58.249 34.615 0.00 0.00 46.30 3.69
1798 3666 8.221251 ACCTTTTCTTATGAGTTTTCTCTCCTT 58.779 33.333 0.00 0.00 46.30 3.36
1799 3667 8.726068 CCTTTTCTTATGAGTTTTCTCTCCTTC 58.274 37.037 0.00 0.00 46.30 3.46
1800 3668 9.277783 CTTTTCTTATGAGTTTTCTCTCCTTCA 57.722 33.333 0.00 0.00 46.30 3.02
1801 3669 8.608844 TTTCTTATGAGTTTTCTCTCCTTCAC 57.391 34.615 0.00 0.00 46.30 3.18
1802 3670 6.702329 TCTTATGAGTTTTCTCTCCTTCACC 58.298 40.000 0.00 0.00 46.30 4.02
1803 3671 6.498651 TCTTATGAGTTTTCTCTCCTTCACCT 59.501 38.462 0.00 0.00 46.30 4.00
1804 3672 4.608948 TGAGTTTTCTCTCCTTCACCTC 57.391 45.455 0.00 0.00 46.30 3.85
1805 3673 3.967326 TGAGTTTTCTCTCCTTCACCTCA 59.033 43.478 0.00 0.00 46.30 3.86
1806 3674 4.594920 TGAGTTTTCTCTCCTTCACCTCAT 59.405 41.667 0.00 0.00 46.30 2.90
1807 3675 5.159273 AGTTTTCTCTCCTTCACCTCATC 57.841 43.478 0.00 0.00 0.00 2.92
1808 3676 4.594920 AGTTTTCTCTCCTTCACCTCATCA 59.405 41.667 0.00 0.00 0.00 3.07
1809 3677 5.250313 AGTTTTCTCTCCTTCACCTCATCAT 59.750 40.000 0.00 0.00 0.00 2.45
1810 3678 5.768980 TTTCTCTCCTTCACCTCATCATT 57.231 39.130 0.00 0.00 0.00 2.57
1811 3679 5.768980 TTCTCTCCTTCACCTCATCATTT 57.231 39.130 0.00 0.00 0.00 2.32
1812 3680 6.874278 TTCTCTCCTTCACCTCATCATTTA 57.126 37.500 0.00 0.00 0.00 1.40
1813 3681 7.443302 TTCTCTCCTTCACCTCATCATTTAT 57.557 36.000 0.00 0.00 0.00 1.40
1814 3682 7.060383 TCTCTCCTTCACCTCATCATTTATC 57.940 40.000 0.00 0.00 0.00 1.75
1815 3683 6.042552 TCTCTCCTTCACCTCATCATTTATCC 59.957 42.308 0.00 0.00 0.00 2.59
1816 3684 5.907662 TCTCCTTCACCTCATCATTTATCCT 59.092 40.000 0.00 0.00 0.00 3.24
1817 3685 7.075797 TCTCCTTCACCTCATCATTTATCCTA 58.924 38.462 0.00 0.00 0.00 2.94
1818 3686 7.015682 TCTCCTTCACCTCATCATTTATCCTAC 59.984 40.741 0.00 0.00 0.00 3.18
1819 3687 6.615316 TCCTTCACCTCATCATTTATCCTACA 59.385 38.462 0.00 0.00 0.00 2.74
1820 3688 7.293299 TCCTTCACCTCATCATTTATCCTACAT 59.707 37.037 0.00 0.00 0.00 2.29
1821 3689 7.389884 CCTTCACCTCATCATTTATCCTACATG 59.610 40.741 0.00 0.00 0.00 3.21
1822 3690 6.772605 TCACCTCATCATTTATCCTACATGG 58.227 40.000 0.00 0.00 37.10 3.66
1823 3691 5.413833 CACCTCATCATTTATCCTACATGGC 59.586 44.000 0.00 0.00 35.26 4.40
1824 3692 5.073554 ACCTCATCATTTATCCTACATGGCA 59.926 40.000 0.00 0.00 35.26 4.92
1825 3693 5.413833 CCTCATCATTTATCCTACATGGCAC 59.586 44.000 0.00 0.00 35.26 5.01
1826 3694 6.191657 TCATCATTTATCCTACATGGCACT 57.808 37.500 0.00 0.00 35.26 4.40
1827 3695 6.604171 TCATCATTTATCCTACATGGCACTT 58.396 36.000 0.00 0.00 35.26 3.16
1828 3696 6.712095 TCATCATTTATCCTACATGGCACTTC 59.288 38.462 0.00 0.00 35.26 3.01
1829 3697 6.252599 TCATTTATCCTACATGGCACTTCT 57.747 37.500 0.00 0.00 35.26 2.85
1830 3698 7.373617 TCATTTATCCTACATGGCACTTCTA 57.626 36.000 0.00 0.00 35.26 2.10
1831 3699 7.801104 TCATTTATCCTACATGGCACTTCTAA 58.199 34.615 0.00 0.00 35.26 2.10
1832 3700 7.933577 TCATTTATCCTACATGGCACTTCTAAG 59.066 37.037 0.00 0.00 35.26 2.18
1834 3702 7.618019 TTATCCTACATGGCACTTCTAAGAT 57.382 36.000 0.00 0.00 35.26 2.40
1847 3715 3.634397 TCTAAGATTGCCCAGTTCCTG 57.366 47.619 0.00 0.00 0.00 3.86
1854 3722 2.673775 TGCCCAGTTCCTGATTTTCA 57.326 45.000 0.00 0.00 32.44 2.69
1859 3727 4.706962 GCCCAGTTCCTGATTTTCATAAGT 59.293 41.667 0.00 0.00 32.44 2.24
1886 3762 2.036958 TGGTACTTCCATTCCATGCG 57.963 50.000 0.00 0.00 41.93 4.73
1954 3832 5.876651 AAATTCTCAGCCAGTTTTCCTTT 57.123 34.783 0.00 0.00 0.00 3.11
1959 3837 4.339247 TCTCAGCCAGTTTTCCTTTTCTTG 59.661 41.667 0.00 0.00 0.00 3.02
1961 3839 3.033909 AGCCAGTTTTCCTTTTCTTGCT 58.966 40.909 0.00 0.00 0.00 3.91
2309 4189 4.220602 GTGCATTGATCCTTTAGGTTTGGT 59.779 41.667 0.00 0.00 36.34 3.67
2518 4398 7.451255 TGATTTGGAAGGTGACAATTCTATGTT 59.549 33.333 0.00 0.00 32.57 2.71
2706 4617 4.019174 CCAGCTTTTCTGTATCCATTGGT 58.981 43.478 1.86 0.00 41.25 3.67
2749 4660 0.980423 TGCTGCCACTGTGGTATGTA 59.020 50.000 26.48 13.93 40.46 2.29
2757 4668 5.012561 TGCCACTGTGGTATGTATATGCATA 59.987 40.000 26.48 9.27 40.46 3.14
2777 4688 9.743581 ATGCATATATCATTCTTGAACCATACA 57.256 29.630 0.00 0.00 34.96 2.29
2901 4833 0.318360 TGTGCTGGAACACTCGTACG 60.318 55.000 9.53 9.53 41.30 3.67
3003 4936 5.598416 AGTTTTTAAGGCTCTGTTTGCTT 57.402 34.783 0.00 0.00 0.00 3.91
3118 5053 2.561478 AGGATACGTGCACACCTTTT 57.439 45.000 18.64 0.00 46.39 2.27
3452 5553 4.379499 CCGCCCACTTTTCTTCTTTATGTC 60.379 45.833 0.00 0.00 0.00 3.06
3639 5740 4.837093 TTACCCGATGGAATCAGAGTTT 57.163 40.909 0.00 0.00 45.97 2.66
3647 5748 7.715249 CCCGATGGAATCAGAGTTTCTAAATAA 59.285 37.037 0.00 0.00 45.97 1.40
3648 5749 8.768955 CCGATGGAATCAGAGTTTCTAAATAAG 58.231 37.037 0.00 0.00 45.97 1.73
3649 5750 9.534565 CGATGGAATCAGAGTTTCTAAATAAGA 57.465 33.333 0.00 0.00 45.97 2.10
3664 5765 9.817809 TTCTAAATAAGAGTAATGCTACACCTG 57.182 33.333 0.00 0.00 35.05 4.00
3665 5766 6.927294 AAATAAGAGTAATGCTACACCTGC 57.073 37.500 0.00 0.00 0.00 4.85
3666 5767 3.981071 AAGAGTAATGCTACACCTGCA 57.019 42.857 0.00 0.00 44.95 4.41
3679 5780 8.827177 TGCTACACCTGCATAATTAGTATTAC 57.173 34.615 0.00 0.00 35.31 1.89
3680 5781 7.597369 TGCTACACCTGCATAATTAGTATTACG 59.403 37.037 0.00 0.00 35.31 3.18
3681 5782 7.597743 GCTACACCTGCATAATTAGTATTACGT 59.402 37.037 0.00 0.00 0.00 3.57
3682 5783 7.709269 ACACCTGCATAATTAGTATTACGTG 57.291 36.000 0.00 0.00 0.00 4.49
3683 5784 7.494211 ACACCTGCATAATTAGTATTACGTGA 58.506 34.615 0.00 0.00 0.00 4.35
3684 5785 8.148351 ACACCTGCATAATTAGTATTACGTGAT 58.852 33.333 0.00 0.00 0.00 3.06
3685 5786 8.988934 CACCTGCATAATTAGTATTACGTGATT 58.011 33.333 0.00 0.00 0.00 2.57
3712 5813 1.714541 TGTGCAACATGGGGATTTGT 58.285 45.000 0.00 0.00 45.67 2.83
3713 5814 1.343789 TGTGCAACATGGGGATTTGTG 59.656 47.619 0.00 0.00 45.67 3.33
3714 5815 1.617850 GTGCAACATGGGGATTTGTGA 59.382 47.619 0.00 0.00 36.32 3.58
3715 5816 2.234414 GTGCAACATGGGGATTTGTGAT 59.766 45.455 0.00 0.00 36.32 3.06
3716 5817 2.905085 TGCAACATGGGGATTTGTGATT 59.095 40.909 0.00 0.00 0.00 2.57
3717 5818 3.264104 GCAACATGGGGATTTGTGATTG 58.736 45.455 0.00 0.00 0.00 2.67
3718 5819 3.864243 CAACATGGGGATTTGTGATTGG 58.136 45.455 0.00 0.00 0.00 3.16
3719 5820 3.471430 ACATGGGGATTTGTGATTGGA 57.529 42.857 0.00 0.00 0.00 3.53
3720 5821 3.368248 ACATGGGGATTTGTGATTGGAG 58.632 45.455 0.00 0.00 0.00 3.86
3721 5822 3.011595 ACATGGGGATTTGTGATTGGAGA 59.988 43.478 0.00 0.00 0.00 3.71
3722 5823 3.824001 TGGGGATTTGTGATTGGAGAA 57.176 42.857 0.00 0.00 0.00 2.87
3723 5824 4.125124 TGGGGATTTGTGATTGGAGAAA 57.875 40.909 0.00 0.00 0.00 2.52
3724 5825 4.088634 TGGGGATTTGTGATTGGAGAAAG 58.911 43.478 0.00 0.00 0.00 2.62
3725 5826 4.202663 TGGGGATTTGTGATTGGAGAAAGA 60.203 41.667 0.00 0.00 0.00 2.52
3726 5827 4.400567 GGGGATTTGTGATTGGAGAAAGAG 59.599 45.833 0.00 0.00 0.00 2.85
3727 5828 4.400567 GGGATTTGTGATTGGAGAAAGAGG 59.599 45.833 0.00 0.00 0.00 3.69
3728 5829 4.400567 GGATTTGTGATTGGAGAAAGAGGG 59.599 45.833 0.00 0.00 0.00 4.30
3729 5830 4.722526 TTTGTGATTGGAGAAAGAGGGA 57.277 40.909 0.00 0.00 0.00 4.20
3730 5831 3.988976 TGTGATTGGAGAAAGAGGGAG 57.011 47.619 0.00 0.00 0.00 4.30
3731 5832 2.573462 TGTGATTGGAGAAAGAGGGAGG 59.427 50.000 0.00 0.00 0.00 4.30
3732 5833 2.840651 GTGATTGGAGAAAGAGGGAGGA 59.159 50.000 0.00 0.00 0.00 3.71
3733 5834 3.264450 GTGATTGGAGAAAGAGGGAGGAA 59.736 47.826 0.00 0.00 0.00 3.36
3734 5835 3.521126 TGATTGGAGAAAGAGGGAGGAAG 59.479 47.826 0.00 0.00 0.00 3.46
3735 5836 1.958288 TGGAGAAAGAGGGAGGAAGG 58.042 55.000 0.00 0.00 0.00 3.46
3736 5837 1.208706 GGAGAAAGAGGGAGGAAGGG 58.791 60.000 0.00 0.00 0.00 3.95
3737 5838 1.208706 GAGAAAGAGGGAGGAAGGGG 58.791 60.000 0.00 0.00 0.00 4.79
3738 5839 0.916845 AGAAAGAGGGAGGAAGGGGC 60.917 60.000 0.00 0.00 0.00 5.80
3739 5840 1.927569 GAAAGAGGGAGGAAGGGGCC 61.928 65.000 0.00 0.00 0.00 5.80
3740 5841 3.972328 AAGAGGGAGGAAGGGGCCC 62.972 68.421 17.12 17.12 42.37 5.80
3741 5842 4.760220 GAGGGAGGAAGGGGCCCA 62.760 72.222 27.72 0.00 44.55 5.36
3779 5880 2.784347 GGGGGAGAGAGAGTTTGTTTG 58.216 52.381 0.00 0.00 0.00 2.93
3780 5881 2.553247 GGGGGAGAGAGAGTTTGTTTGG 60.553 54.545 0.00 0.00 0.00 3.28
3781 5882 2.372172 GGGGAGAGAGAGTTTGTTTGGA 59.628 50.000 0.00 0.00 0.00 3.53
3782 5883 3.181443 GGGGAGAGAGAGTTTGTTTGGAA 60.181 47.826 0.00 0.00 0.00 3.53
3783 5884 4.507512 GGGGAGAGAGAGTTTGTTTGGAAT 60.508 45.833 0.00 0.00 0.00 3.01
3784 5885 5.073428 GGGAGAGAGAGTTTGTTTGGAATT 58.927 41.667 0.00 0.00 0.00 2.17
3785 5886 5.536538 GGGAGAGAGAGTTTGTTTGGAATTT 59.463 40.000 0.00 0.00 0.00 1.82
3786 5887 6.040955 GGGAGAGAGAGTTTGTTTGGAATTTT 59.959 38.462 0.00 0.00 0.00 1.82
3787 5888 7.230712 GGGAGAGAGAGTTTGTTTGGAATTTTA 59.769 37.037 0.00 0.00 0.00 1.52
3788 5889 8.076781 GGAGAGAGAGTTTGTTTGGAATTTTAC 58.923 37.037 0.00 0.00 0.00 2.01
3789 5890 7.639945 AGAGAGAGTTTGTTTGGAATTTTACG 58.360 34.615 0.00 0.00 0.00 3.18
3790 5891 7.282450 AGAGAGAGTTTGTTTGGAATTTTACGT 59.718 33.333 0.00 0.00 0.00 3.57
3791 5892 8.441312 AGAGAGTTTGTTTGGAATTTTACGTA 57.559 30.769 0.00 0.00 0.00 3.57
3792 5893 8.895737 AGAGAGTTTGTTTGGAATTTTACGTAA 58.104 29.630 3.29 3.29 0.00 3.18
3793 5894 9.505995 GAGAGTTTGTTTGGAATTTTACGTAAA 57.494 29.630 16.59 16.59 0.00 2.01
3794 5895 9.857957 AGAGTTTGTTTGGAATTTTACGTAAAA 57.142 25.926 29.81 29.81 39.25 1.52
3797 5898 9.201424 GTTTGTTTGGAATTTTACGTAAAAAGC 57.799 29.630 30.92 24.63 40.32 3.51
3798 5899 8.705048 TTGTTTGGAATTTTACGTAAAAAGCT 57.295 26.923 30.92 20.45 40.32 3.74
3799 5900 8.705048 TGTTTGGAATTTTACGTAAAAAGCTT 57.295 26.923 30.92 22.50 40.32 3.74
3800 5901 8.809478 TGTTTGGAATTTTACGTAAAAAGCTTC 58.191 29.630 30.92 27.19 40.32 3.86
3801 5902 7.611821 TTGGAATTTTACGTAAAAAGCTTCG 57.388 32.000 30.92 0.82 40.32 3.79
3802 5903 6.727215 TGGAATTTTACGTAAAAAGCTTCGT 58.273 32.000 30.92 14.46 40.32 3.85
3803 5904 7.859598 TGGAATTTTACGTAAAAAGCTTCGTA 58.140 30.769 30.92 19.96 40.32 3.43
3804 5905 8.011106 TGGAATTTTACGTAAAAAGCTTCGTAG 58.989 33.333 30.92 3.57 40.32 3.51
3805 5906 7.479603 GGAATTTTACGTAAAAAGCTTCGTAGG 59.520 37.037 30.92 11.12 40.32 3.18
3806 5907 7.656707 ATTTTACGTAAAAAGCTTCGTAGGA 57.343 32.000 30.92 9.60 40.32 2.94
3807 5908 7.656707 TTTTACGTAAAAAGCTTCGTAGGAT 57.343 32.000 26.80 4.77 39.33 3.24
3808 5909 7.656707 TTTACGTAAAAAGCTTCGTAGGATT 57.343 32.000 18.10 0.00 39.33 3.01
3809 5910 8.755696 TTTACGTAAAAAGCTTCGTAGGATTA 57.244 30.769 18.10 1.88 39.33 1.75
3810 5911 6.638168 ACGTAAAAAGCTTCGTAGGATTAC 57.362 37.500 8.96 5.60 34.78 1.89
3821 5922 4.156664 CGTAGGATTACGTGGATGTAGG 57.843 50.000 0.00 0.00 45.79 3.18
3822 5923 3.817084 CGTAGGATTACGTGGATGTAGGA 59.183 47.826 0.00 0.00 45.79 2.94
3823 5924 4.458295 CGTAGGATTACGTGGATGTAGGAT 59.542 45.833 0.00 0.00 45.79 3.24
3824 5925 5.048224 CGTAGGATTACGTGGATGTAGGATT 60.048 44.000 0.00 0.00 45.79 3.01
3825 5926 5.888982 AGGATTACGTGGATGTAGGATTT 57.111 39.130 0.00 0.00 0.00 2.17
3826 5927 6.248569 AGGATTACGTGGATGTAGGATTTT 57.751 37.500 0.00 0.00 0.00 1.82
3827 5928 6.289064 AGGATTACGTGGATGTAGGATTTTC 58.711 40.000 0.00 0.00 0.00 2.29
3828 5929 6.053005 GGATTACGTGGATGTAGGATTTTCA 58.947 40.000 0.00 0.00 0.00 2.69
3829 5930 6.202954 GGATTACGTGGATGTAGGATTTTCAG 59.797 42.308 0.00 0.00 0.00 3.02
3830 5931 3.270877 ACGTGGATGTAGGATTTTCAGC 58.729 45.455 0.00 0.00 0.00 4.26
3831 5932 3.055094 ACGTGGATGTAGGATTTTCAGCT 60.055 43.478 0.00 0.00 0.00 4.24
3832 5933 4.161565 ACGTGGATGTAGGATTTTCAGCTA 59.838 41.667 0.00 0.00 0.00 3.32
3833 5934 5.116180 CGTGGATGTAGGATTTTCAGCTAA 58.884 41.667 0.00 0.00 0.00 3.09
3834 5935 5.584649 CGTGGATGTAGGATTTTCAGCTAAA 59.415 40.000 0.00 0.00 0.00 1.85
3835 5936 6.260936 CGTGGATGTAGGATTTTCAGCTAAAT 59.739 38.462 0.00 0.00 0.00 1.40
3836 5937 7.201732 CGTGGATGTAGGATTTTCAGCTAAATT 60.202 37.037 0.00 0.00 0.00 1.82
3899 7281 9.140286 GCTTATTTTCAAACCTTACCATCTTTC 57.860 33.333 0.00 0.00 0.00 2.62
4023 8139 8.131731 AGTTCTGAACTAATCTTTGAAAGCAAC 58.868 33.333 20.85 0.00 40.69 4.17
4028 8149 8.077991 TGAACTAATCTTTGAAAGCAACTGATG 58.922 33.333 0.00 0.00 32.79 3.07
4395 8685 7.170965 TCTCTTATTTGCTGAAAATCACCTCT 58.829 34.615 0.00 0.00 39.29 3.69
4396 8686 8.321353 TCTCTTATTTGCTGAAAATCACCTCTA 58.679 33.333 0.00 0.00 39.29 2.43
4397 8687 8.862325 TCTTATTTGCTGAAAATCACCTCTAA 57.138 30.769 0.00 0.00 39.29 2.10
4399 8689 9.512435 CTTATTTGCTGAAAATCACCTCTAATG 57.488 33.333 0.00 0.00 39.29 1.90
4400 8690 5.902613 TTGCTGAAAATCACCTCTAATGG 57.097 39.130 0.00 0.00 0.00 3.16
4402 8692 6.061022 TGCTGAAAATCACCTCTAATGGTA 57.939 37.500 0.00 0.00 38.45 3.25
4403 8693 6.662755 TGCTGAAAATCACCTCTAATGGTAT 58.337 36.000 0.00 0.00 38.45 2.73
4466 8757 4.058731 TGGATGGTTATATCCCCAAAGGT 58.941 43.478 0.00 0.00 44.93 3.50
4470 8761 7.146851 TGGATGGTTATATCCCCAAAGGTAAAT 60.147 37.037 0.00 0.00 44.93 1.40
4621 8914 7.920151 TGTGTTGTTTCTTGGAGAAATTGTATG 59.080 33.333 6.42 0.00 44.94 2.39
4641 8934 0.455815 GGGGGTTGTTGATGAATCGC 59.544 55.000 0.00 0.00 0.00 4.58
4734 9027 3.012518 CTCCATGTGGTTTAAGCCTGAG 58.987 50.000 9.96 4.47 36.34 3.35
4853 9146 7.719633 ACTTACACTGACAATACATTTCAAGGT 59.280 33.333 0.00 0.00 0.00 3.50
4856 9149 5.010282 ACTGACAATACATTTCAAGGTCCC 58.990 41.667 0.00 0.00 0.00 4.46
4888 9181 5.363939 ACGGATCAAAAATGAAAGCCAAAA 58.636 33.333 0.00 0.00 0.00 2.44
4919 9212 4.469657 AGGAGTAGAGCTCGAATGAGATT 58.530 43.478 8.37 0.00 41.92 2.40
4925 9218 3.068024 AGAGCTCGAATGAGATTCTCACC 59.932 47.826 18.35 12.07 43.63 4.02
4939 9232 1.351017 TCTCACCGGATTCCTTTTGCT 59.649 47.619 9.46 0.00 0.00 3.91
4973 9269 6.330004 TGTATCAGAAAGAAATGCTTGCAA 57.670 33.333 0.00 0.00 36.80 4.08
5013 9309 1.975660 TGGTTTCTGCCAGTTGTACC 58.024 50.000 0.00 0.00 33.97 3.34
5068 9365 6.994496 TCATGGATAATAGCAAGACTTCCAAG 59.006 38.462 0.00 0.00 35.64 3.61
5071 9368 6.823689 TGGATAATAGCAAGACTTCCAAGAAC 59.176 38.462 0.00 0.00 30.20 3.01
5112 9409 0.102300 AACTTGGTGCTTTTGCCGTC 59.898 50.000 0.00 0.00 46.87 4.79
5131 9428 3.370978 CGTCTCTCCATGTAAACGCAATT 59.629 43.478 0.00 0.00 0.00 2.32
5196 9495 1.419374 CACGACTGGTTTCTTCCTCG 58.581 55.000 0.00 0.00 33.40 4.63
5227 9531 4.650972 ATGAAACTAAGCTGGTGGGTAA 57.349 40.909 0.00 0.00 0.00 2.85
5228 9532 4.015872 TGAAACTAAGCTGGTGGGTAAG 57.984 45.455 0.00 0.00 0.00 2.34
5230 9534 0.618981 ACTAAGCTGGTGGGTAAGGC 59.381 55.000 0.00 0.00 0.00 4.35
5231 9535 0.107165 CTAAGCTGGTGGGTAAGGCC 60.107 60.000 0.00 0.00 0.00 5.19
5233 9537 4.796495 GCTGGTGGGTAAGGCCGG 62.796 72.222 0.00 0.00 38.44 6.13
5234 9538 3.006728 CTGGTGGGTAAGGCCGGA 61.007 66.667 5.05 0.00 38.44 5.14
5235 9539 3.006728 TGGTGGGTAAGGCCGGAG 61.007 66.667 5.05 0.00 38.44 4.63
5255 9559 5.488341 GGAGGAATTACAACTAAGCTCACA 58.512 41.667 0.00 0.00 0.00 3.58
5256 9560 6.116126 GGAGGAATTACAACTAAGCTCACAT 58.884 40.000 0.00 0.00 0.00 3.21
5257 9561 6.037610 GGAGGAATTACAACTAAGCTCACATG 59.962 42.308 0.00 0.00 0.00 3.21
5258 9562 6.476378 AGGAATTACAACTAAGCTCACATGT 58.524 36.000 0.00 0.00 0.00 3.21
5259 9563 6.942576 AGGAATTACAACTAAGCTCACATGTT 59.057 34.615 0.00 0.00 0.00 2.71
5260 9564 7.448469 AGGAATTACAACTAAGCTCACATGTTT 59.552 33.333 0.00 0.00 0.00 2.83
5264 9568 9.893305 ATTACAACTAAGCTCACATGTTTTTAC 57.107 29.630 0.00 0.00 0.00 2.01
5265 9569 7.568199 ACAACTAAGCTCACATGTTTTTACT 57.432 32.000 0.00 0.00 0.00 2.24
5266 9570 7.996385 ACAACTAAGCTCACATGTTTTTACTT 58.004 30.769 0.00 0.00 0.00 2.24
5267 9571 7.915397 ACAACTAAGCTCACATGTTTTTACTTG 59.085 33.333 0.00 2.05 0.00 3.16
5268 9572 7.801716 ACTAAGCTCACATGTTTTTACTTGA 57.198 32.000 0.00 0.00 0.00 3.02
5269 9573 8.220755 ACTAAGCTCACATGTTTTTACTTGAA 57.779 30.769 0.00 0.00 0.00 2.69
5270 9574 8.682710 ACTAAGCTCACATGTTTTTACTTGAAA 58.317 29.630 0.00 0.00 0.00 2.69
5271 9575 7.992180 AAGCTCACATGTTTTTACTTGAAAG 57.008 32.000 0.00 0.00 0.00 2.62
5272 9576 5.979517 AGCTCACATGTTTTTACTTGAAAGC 59.020 36.000 0.00 0.00 0.00 3.51
5273 9577 5.108254 GCTCACATGTTTTTACTTGAAAGCG 60.108 40.000 0.00 0.00 0.00 4.68
5274 9578 5.277825 TCACATGTTTTTACTTGAAAGCGG 58.722 37.500 0.00 0.00 0.00 5.52
5275 9579 4.048504 ACATGTTTTTACTTGAAAGCGGC 58.951 39.130 0.00 0.00 0.00 6.53
5276 9580 2.722071 TGTTTTTACTTGAAAGCGGCG 58.278 42.857 0.51 0.51 0.00 6.46
5277 9581 1.450533 GTTTTTACTTGAAAGCGGCGC 59.549 47.619 26.86 26.86 0.00 6.53
5278 9582 0.384974 TTTTACTTGAAAGCGGCGCG 60.385 50.000 27.59 13.64 0.00 6.86
5279 9583 2.177654 TTTACTTGAAAGCGGCGCGG 62.178 55.000 27.59 11.08 0.00 6.46
5280 9584 3.576932 TACTTGAAAGCGGCGCGGA 62.577 57.895 27.59 4.30 0.00 5.54
5281 9585 2.845752 TACTTGAAAGCGGCGCGGAT 62.846 55.000 27.59 16.66 0.00 4.18
5282 9586 3.440356 CTTGAAAGCGGCGCGGATC 62.440 63.158 27.59 24.07 0.00 3.36
5353 9673 4.203226 TGGGCATATATTCAGAAACGCAA 58.797 39.130 0.00 0.00 0.00 4.85
5365 9685 3.241322 CAGAAACGCAACAGAAAAGCTTG 59.759 43.478 0.00 0.00 0.00 4.01
5373 9693 3.637998 ACAGAAAAGCTTGTGCAGATG 57.362 42.857 0.00 0.00 42.74 2.90
5398 9750 2.416972 GGTTAGTCCAGTAACGGAGCAG 60.417 54.545 0.00 0.00 35.10 4.24
5463 9815 2.691409 CCTTCTGGATAAGGCAACGA 57.309 50.000 0.00 0.00 39.69 3.85
5464 9816 3.199880 CCTTCTGGATAAGGCAACGAT 57.800 47.619 0.00 0.00 39.69 3.73
5466 9818 2.620251 TCTGGATAAGGCAACGATGG 57.380 50.000 0.00 0.00 46.39 3.51
5467 9819 2.115427 TCTGGATAAGGCAACGATGGA 58.885 47.619 0.00 0.00 46.39 3.41
5468 9820 2.705658 TCTGGATAAGGCAACGATGGAT 59.294 45.455 0.00 0.00 46.39 3.41
5470 9822 2.154462 GGATAAGGCAACGATGGATGG 58.846 52.381 0.00 0.00 46.39 3.51
5471 9823 2.224523 GGATAAGGCAACGATGGATGGA 60.225 50.000 0.00 0.00 46.39 3.41
5472 9824 2.325583 TAAGGCAACGATGGATGGAC 57.674 50.000 0.00 0.00 46.39 4.02
5477 9829 2.479837 GCAACGATGGATGGACGATAA 58.520 47.619 0.00 0.00 0.00 1.75
5519 9871 5.505985 CGGCACACTAGAACTAGATAGAACC 60.506 48.000 14.64 7.67 36.97 3.62
5521 9873 6.041069 GGCACACTAGAACTAGATAGAACCAT 59.959 42.308 14.64 0.00 36.97 3.55
5522 9874 6.920758 GCACACTAGAACTAGATAGAACCATG 59.079 42.308 14.64 3.21 36.97 3.66
5523 9875 7.201830 GCACACTAGAACTAGATAGAACCATGA 60.202 40.741 14.64 0.00 36.97 3.07
5524 9876 8.349245 CACACTAGAACTAGATAGAACCATGAG 58.651 40.741 14.64 0.00 36.97 2.90
5525 9877 7.504238 ACACTAGAACTAGATAGAACCATGAGG 59.496 40.741 14.64 0.00 37.64 3.86
5526 9878 5.799827 AGAACTAGATAGAACCATGAGGC 57.200 43.478 0.00 0.00 39.06 4.70
5527 9879 5.463154 AGAACTAGATAGAACCATGAGGCT 58.537 41.667 0.00 0.00 39.06 4.58
5528 9880 5.538433 AGAACTAGATAGAACCATGAGGCTC 59.462 44.000 7.79 7.79 39.06 4.70
5529 9881 4.156477 ACTAGATAGAACCATGAGGCTCC 58.844 47.826 12.86 0.00 39.06 4.70
5544 9896 4.230502 TGAGGCTCCAAGGGAAATATCTTT 59.769 41.667 12.86 0.00 0.00 2.52
5550 9902 6.631088 GCTCCAAGGGAAATATCTTTGCAAAT 60.631 38.462 13.23 0.89 34.62 2.32
5578 9942 1.039856 TTTTTCCCTCTTGCCAGTGC 58.960 50.000 0.00 0.00 38.26 4.40
5729 10093 9.574516 AGTAACACTTTCTACCTTCATGAATTT 57.425 29.630 8.96 1.34 0.00 1.82
5735 10099 8.579863 ACTTTCTACCTTCATGAATTTTTCCTG 58.420 33.333 8.96 0.41 0.00 3.86
5738 10102 8.110860 TCTACCTTCATGAATTTTTCCTGAAC 57.889 34.615 8.96 0.00 38.71 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.311542 AGTCCAGCCCCAATGAATAACA 59.688 45.455 0.00 0.00 0.00 2.41
33 34 2.949963 GCAGTCCAGCCCCAATGAATAA 60.950 50.000 0.00 0.00 0.00 1.40
44 45 3.512516 GCCATTCGCAGTCCAGCC 61.513 66.667 0.00 0.00 37.47 4.85
131 132 3.521126 AGAATAGCACCAGACTTCCACAT 59.479 43.478 0.00 0.00 0.00 3.21
150 151 4.065088 CAGGAAGAATTTCACCGACAGAA 58.935 43.478 0.00 0.00 34.90 3.02
174 175 0.803117 GCGGTTTAAAGAGGCCAGAC 59.197 55.000 5.01 0.00 0.00 3.51
298 299 1.040646 AGGTGACTCTCGCAAAGACA 58.959 50.000 0.00 0.00 32.90 3.41
304 305 2.917227 TGCCAGGTGACTCTCGCA 60.917 61.111 0.00 0.00 40.21 5.10
336 337 0.530870 TTGTGCCATCGTTCGACACA 60.531 50.000 11.19 11.19 39.35 3.72
348 349 1.228521 CCATCTGGTGGTTGTGCCA 60.229 57.895 0.00 0.00 46.95 4.92
400 401 1.043116 CAGCCGGTATGGTGAGGAGA 61.043 60.000 1.90 0.00 41.21 3.71
469 470 1.915614 CTGAGTTGTGATGGCGCCAC 61.916 60.000 35.50 25.23 35.23 5.01
480 481 4.038042 TCTTGTCGAAGATGACTGAGTTGT 59.962 41.667 0.00 0.00 40.67 3.32
588 589 3.751698 GTGTCAGGTTACAGGGATGAAAC 59.248 47.826 0.00 0.00 0.00 2.78
641 642 0.674581 TGGCGATCAAGTGAGCAAGG 60.675 55.000 0.00 0.00 0.00 3.61
643 644 1.291184 CGTGGCGATCAAGTGAGCAA 61.291 55.000 0.00 0.00 0.00 3.91
663 664 1.214367 CGTACACAGAAAGGCGTGTT 58.786 50.000 0.00 0.00 43.71 3.32
693 694 6.857956 AGAGTGATAGAACATACAGTGTCAC 58.142 40.000 0.00 0.00 41.14 3.67
708 709 9.702494 TGTATCTTTGCATTGATAGAGTGATAG 57.298 33.333 8.77 0.00 0.00 2.08
710 711 8.209584 AGTGTATCTTTGCATTGATAGAGTGAT 58.790 33.333 10.87 0.00 0.00 3.06
713 714 7.790027 AGAGTGTATCTTTGCATTGATAGAGT 58.210 34.615 11.25 11.25 32.99 3.24
716 717 9.539825 ACTAAGAGTGTATCTTTGCATTGATAG 57.460 33.333 8.77 1.67 46.49 2.08
761 765 9.668497 AAACTTGAACAAATATAGTACTCCTCC 57.332 33.333 0.00 0.00 0.00 4.30
814 818 9.827411 GTGTGGAGAATATACTTGTTCTTTTTC 57.173 33.333 0.00 0.00 33.89 2.29
824 2658 5.932303 GTGTGTGTGTGTGGAGAATATACTT 59.068 40.000 0.00 0.00 0.00 2.24
829 2663 3.118592 TGTGTGTGTGTGTGTGGAGAATA 60.119 43.478 0.00 0.00 0.00 1.75
844 2678 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
845 2679 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
846 2680 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
847 2681 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
848 2682 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
849 2683 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
850 2684 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
851 2685 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
852 2686 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
853 2687 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
854 2688 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
855 2689 1.535028 CTTGTGTGTGTGTGTGTGTGT 59.465 47.619 0.00 0.00 0.00 3.72
856 2690 1.803555 TCTTGTGTGTGTGTGTGTGTG 59.196 47.619 0.00 0.00 0.00 3.82
857 2691 1.804151 GTCTTGTGTGTGTGTGTGTGT 59.196 47.619 0.00 0.00 0.00 3.72
858 2692 1.803555 TGTCTTGTGTGTGTGTGTGTG 59.196 47.619 0.00 0.00 0.00 3.82
859 2693 2.177394 TGTCTTGTGTGTGTGTGTGT 57.823 45.000 0.00 0.00 0.00 3.72
860 2694 2.483877 ACTTGTCTTGTGTGTGTGTGTG 59.516 45.455 0.00 0.00 0.00 3.82
861 2695 2.778299 ACTTGTCTTGTGTGTGTGTGT 58.222 42.857 0.00 0.00 0.00 3.72
862 2696 6.128553 GGATATACTTGTCTTGTGTGTGTGTG 60.129 42.308 0.00 0.00 0.00 3.82
863 2697 5.932303 GGATATACTTGTCTTGTGTGTGTGT 59.068 40.000 0.00 0.00 0.00 3.72
864 2698 6.091305 CAGGATATACTTGTCTTGTGTGTGTG 59.909 42.308 0.00 0.00 0.00 3.82
865 2699 6.166279 CAGGATATACTTGTCTTGTGTGTGT 58.834 40.000 0.00 0.00 0.00 3.72
866 2700 5.582269 CCAGGATATACTTGTCTTGTGTGTG 59.418 44.000 0.00 0.00 0.00 3.82
867 2701 5.483937 TCCAGGATATACTTGTCTTGTGTGT 59.516 40.000 0.00 0.00 0.00 3.72
868 2702 5.977635 TCCAGGATATACTTGTCTTGTGTG 58.022 41.667 0.00 0.00 0.00 3.82
869 2703 5.958380 TCTCCAGGATATACTTGTCTTGTGT 59.042 40.000 0.00 0.00 0.00 3.72
870 2704 6.471233 TCTCCAGGATATACTTGTCTTGTG 57.529 41.667 0.00 0.00 0.00 3.33
871 2705 7.496346 TTTCTCCAGGATATACTTGTCTTGT 57.504 36.000 0.00 0.00 0.00 3.16
872 2706 7.497249 CCTTTTCTCCAGGATATACTTGTCTTG 59.503 40.741 0.00 0.00 32.41 3.02
926 2760 0.317519 TCGTCTGTGTGTGTACGCTG 60.318 55.000 8.10 0.00 38.15 5.18
975 2809 3.823304 GTGCTGAGAGAAAGGGTTTGATT 59.177 43.478 0.00 0.00 0.00 2.57
1276 3113 2.025418 GGAGCGCCGACGAGAAAAA 61.025 57.895 2.29 0.00 43.93 1.94
1368 3235 3.945434 GTGGCATCGGCATCGCAG 61.945 66.667 0.00 0.00 43.71 5.18
1372 3239 1.668419 AACTAAGTGGCATCGGCATC 58.332 50.000 0.00 0.00 43.71 3.91
1373 3240 2.017049 GAAACTAAGTGGCATCGGCAT 58.983 47.619 0.00 0.00 43.71 4.40
1374 3241 1.271108 TGAAACTAAGTGGCATCGGCA 60.271 47.619 0.00 0.00 43.71 5.69
1375 3242 1.448985 TGAAACTAAGTGGCATCGGC 58.551 50.000 0.00 0.00 40.13 5.54
1376 3243 3.751175 TCTTTGAAACTAAGTGGCATCGG 59.249 43.478 0.00 0.00 0.00 4.18
1377 3244 5.356882 TTCTTTGAAACTAAGTGGCATCG 57.643 39.130 0.00 0.00 0.00 3.84
1465 3332 1.542472 CGCCGGAAACCAATTAAACCT 59.458 47.619 5.05 0.00 0.00 3.50
1580 3448 3.168035 TCAACCATTGTACATGCCCTT 57.832 42.857 0.00 0.00 0.00 3.95
1582 3450 4.887071 TCTTATCAACCATTGTACATGCCC 59.113 41.667 0.00 0.00 0.00 5.36
1583 3451 6.639632 ATCTTATCAACCATTGTACATGCC 57.360 37.500 0.00 0.00 0.00 4.40
1584 3452 8.383318 ACTATCTTATCAACCATTGTACATGC 57.617 34.615 0.00 0.00 0.00 4.06
1585 3453 9.770097 AGACTATCTTATCAACCATTGTACATG 57.230 33.333 0.00 0.00 0.00 3.21
1603 3471 9.979578 CATGCAAGACTTAAGATAAGACTATCT 57.020 33.333 10.09 0.00 45.21 1.98
1604 3472 9.757227 ACATGCAAGACTTAAGATAAGACTATC 57.243 33.333 10.09 0.00 35.10 2.08
1619 3487 9.836864 TGTCATATCTAAATTACATGCAAGACT 57.163 29.630 0.00 0.00 0.00 3.24
1646 3514 9.471702 AGATGATCCATTGTAGACATTCTTTTT 57.528 29.630 0.00 0.00 0.00 1.94
1647 3515 9.118300 GAGATGATCCATTGTAGACATTCTTTT 57.882 33.333 0.00 0.00 0.00 2.27
1648 3516 8.492782 AGAGATGATCCATTGTAGACATTCTTT 58.507 33.333 0.00 0.00 0.00 2.52
1649 3517 8.032045 AGAGATGATCCATTGTAGACATTCTT 57.968 34.615 0.00 0.00 0.00 2.52
1650 3518 7.615039 AGAGATGATCCATTGTAGACATTCT 57.385 36.000 0.00 0.00 0.00 2.40
1651 3519 9.421806 CTAAGAGATGATCCATTGTAGACATTC 57.578 37.037 0.00 0.00 0.00 2.67
1652 3520 7.877097 GCTAAGAGATGATCCATTGTAGACATT 59.123 37.037 0.00 0.00 0.00 2.71
1653 3521 7.235193 AGCTAAGAGATGATCCATTGTAGACAT 59.765 37.037 0.00 0.00 0.00 3.06
1654 3522 6.552725 AGCTAAGAGATGATCCATTGTAGACA 59.447 38.462 0.00 0.00 0.00 3.41
1655 3523 6.991938 AGCTAAGAGATGATCCATTGTAGAC 58.008 40.000 0.00 0.00 0.00 2.59
1656 3524 7.609097 AAGCTAAGAGATGATCCATTGTAGA 57.391 36.000 0.00 0.00 0.00 2.59
1657 3525 9.941325 ATAAAGCTAAGAGATGATCCATTGTAG 57.059 33.333 0.00 0.00 0.00 2.74
1658 3526 9.935241 GATAAAGCTAAGAGATGATCCATTGTA 57.065 33.333 0.00 0.00 0.00 2.41
1659 3527 8.658619 AGATAAAGCTAAGAGATGATCCATTGT 58.341 33.333 0.00 0.00 0.00 2.71
1660 3528 9.504708 AAGATAAAGCTAAGAGATGATCCATTG 57.495 33.333 0.00 0.00 0.00 2.82
1661 3529 9.723601 GAAGATAAAGCTAAGAGATGATCCATT 57.276 33.333 0.00 0.00 0.00 3.16
1662 3530 8.878211 TGAAGATAAAGCTAAGAGATGATCCAT 58.122 33.333 0.00 0.00 0.00 3.41
1663 3531 8.255111 TGAAGATAAAGCTAAGAGATGATCCA 57.745 34.615 0.00 0.00 0.00 3.41
1664 3532 9.723601 ATTGAAGATAAAGCTAAGAGATGATCC 57.276 33.333 0.00 0.00 0.00 3.36
1690 3558 9.391006 CACCATGTTTTTAGGAATAGCTAGTTA 57.609 33.333 0.00 0.00 0.00 2.24
1691 3559 8.107095 TCACCATGTTTTTAGGAATAGCTAGTT 58.893 33.333 0.00 0.00 0.00 2.24
1692 3560 7.630082 TCACCATGTTTTTAGGAATAGCTAGT 58.370 34.615 0.00 0.00 0.00 2.57
1693 3561 7.987458 TCTCACCATGTTTTTAGGAATAGCTAG 59.013 37.037 0.00 0.00 0.00 3.42
1694 3562 7.769044 GTCTCACCATGTTTTTAGGAATAGCTA 59.231 37.037 0.00 0.00 0.00 3.32
1695 3563 6.599638 GTCTCACCATGTTTTTAGGAATAGCT 59.400 38.462 0.00 0.00 0.00 3.32
1696 3564 6.374333 TGTCTCACCATGTTTTTAGGAATAGC 59.626 38.462 0.00 0.00 0.00 2.97
1697 3565 7.921786 TGTCTCACCATGTTTTTAGGAATAG 57.078 36.000 0.00 0.00 0.00 1.73
1699 3567 9.479549 AATATGTCTCACCATGTTTTTAGGAAT 57.520 29.630 0.00 0.00 0.00 3.01
1700 3568 8.739039 CAATATGTCTCACCATGTTTTTAGGAA 58.261 33.333 0.00 0.00 0.00 3.36
1701 3569 7.888021 ACAATATGTCTCACCATGTTTTTAGGA 59.112 33.333 0.00 0.00 0.00 2.94
1702 3570 7.970061 CACAATATGTCTCACCATGTTTTTAGG 59.030 37.037 0.00 0.00 0.00 2.69
1703 3571 7.485913 GCACAATATGTCTCACCATGTTTTTAG 59.514 37.037 0.00 0.00 0.00 1.85
1704 3572 7.176515 AGCACAATATGTCTCACCATGTTTTTA 59.823 33.333 0.00 0.00 0.00 1.52
1705 3573 6.015180 AGCACAATATGTCTCACCATGTTTTT 60.015 34.615 0.00 0.00 0.00 1.94
1706 3574 5.477984 AGCACAATATGTCTCACCATGTTTT 59.522 36.000 0.00 0.00 0.00 2.43
1707 3575 5.012239 AGCACAATATGTCTCACCATGTTT 58.988 37.500 0.00 0.00 0.00 2.83
1708 3576 4.592942 AGCACAATATGTCTCACCATGTT 58.407 39.130 0.00 0.00 0.00 2.71
1709 3577 4.226427 AGCACAATATGTCTCACCATGT 57.774 40.909 0.00 0.00 0.00 3.21
1710 3578 6.051074 TCTTAGCACAATATGTCTCACCATG 58.949 40.000 0.00 0.00 0.00 3.66
1711 3579 6.098838 TCTCTTAGCACAATATGTCTCACCAT 59.901 38.462 0.00 0.00 0.00 3.55
1712 3580 5.422012 TCTCTTAGCACAATATGTCTCACCA 59.578 40.000 0.00 0.00 0.00 4.17
1713 3581 5.907207 TCTCTTAGCACAATATGTCTCACC 58.093 41.667 0.00 0.00 0.00 4.02
1714 3582 7.205992 TGATCTCTTAGCACAATATGTCTCAC 58.794 38.462 0.00 0.00 0.00 3.51
1715 3583 7.352079 TGATCTCTTAGCACAATATGTCTCA 57.648 36.000 0.00 0.00 0.00 3.27
1716 3584 8.306038 AGATGATCTCTTAGCACAATATGTCTC 58.694 37.037 0.00 0.00 0.00 3.36
1717 3585 8.192743 AGATGATCTCTTAGCACAATATGTCT 57.807 34.615 0.00 0.00 0.00 3.41
1718 3586 8.464770 GAGATGATCTCTTAGCACAATATGTC 57.535 38.462 14.98 0.00 40.30 3.06
1749 3617 9.975218 AGGTTTGCCTTATCTTATTTAAGAGAA 57.025 29.630 7.08 7.08 44.18 2.87
1767 3635 7.210174 AGAAAACTCATAAGAAAAGGTTTGCC 58.790 34.615 0.00 0.00 30.34 4.52
1768 3636 8.138074 AGAGAAAACTCATAAGAAAAGGTTTGC 58.862 33.333 0.00 0.00 30.34 3.68
1769 3637 9.670719 GAGAGAAAACTCATAAGAAAAGGTTTG 57.329 33.333 0.00 0.00 36.95 2.93
1770 3638 8.851145 GGAGAGAAAACTCATAAGAAAAGGTTT 58.149 33.333 0.00 0.00 38.51 3.27
1771 3639 8.221251 AGGAGAGAAAACTCATAAGAAAAGGTT 58.779 33.333 0.00 0.00 38.51 3.50
1772 3640 7.750655 AGGAGAGAAAACTCATAAGAAAAGGT 58.249 34.615 0.00 0.00 38.51 3.50
1773 3641 8.628630 AAGGAGAGAAAACTCATAAGAAAAGG 57.371 34.615 0.00 0.00 38.51 3.11
1774 3642 9.277783 TGAAGGAGAGAAAACTCATAAGAAAAG 57.722 33.333 0.00 0.00 38.51 2.27
1775 3643 9.057089 GTGAAGGAGAGAAAACTCATAAGAAAA 57.943 33.333 0.00 0.00 38.51 2.29
1776 3644 7.661847 GGTGAAGGAGAGAAAACTCATAAGAAA 59.338 37.037 0.00 0.00 38.51 2.52
1777 3645 7.016661 AGGTGAAGGAGAGAAAACTCATAAGAA 59.983 37.037 0.00 0.00 38.51 2.52
1778 3646 6.498651 AGGTGAAGGAGAGAAAACTCATAAGA 59.501 38.462 0.00 0.00 38.51 2.10
1779 3647 6.706295 AGGTGAAGGAGAGAAAACTCATAAG 58.294 40.000 0.00 0.00 38.51 1.73
1780 3648 6.270000 TGAGGTGAAGGAGAGAAAACTCATAA 59.730 38.462 0.00 0.00 38.51 1.90
1781 3649 5.780282 TGAGGTGAAGGAGAGAAAACTCATA 59.220 40.000 0.00 0.00 38.51 2.15
1782 3650 4.594920 TGAGGTGAAGGAGAGAAAACTCAT 59.405 41.667 0.00 0.00 38.51 2.90
1783 3651 3.967326 TGAGGTGAAGGAGAGAAAACTCA 59.033 43.478 0.00 0.00 38.51 3.41
1784 3652 4.608948 TGAGGTGAAGGAGAGAAAACTC 57.391 45.455 0.00 0.00 36.31 3.01
1785 3653 4.594920 TGATGAGGTGAAGGAGAGAAAACT 59.405 41.667 0.00 0.00 0.00 2.66
1786 3654 4.899502 TGATGAGGTGAAGGAGAGAAAAC 58.100 43.478 0.00 0.00 0.00 2.43
1787 3655 5.768980 ATGATGAGGTGAAGGAGAGAAAA 57.231 39.130 0.00 0.00 0.00 2.29
1788 3656 5.768980 AATGATGAGGTGAAGGAGAGAAA 57.231 39.130 0.00 0.00 0.00 2.52
1789 3657 5.768980 AAATGATGAGGTGAAGGAGAGAA 57.231 39.130 0.00 0.00 0.00 2.87
1790 3658 6.042552 GGATAAATGATGAGGTGAAGGAGAGA 59.957 42.308 0.00 0.00 0.00 3.10
1791 3659 6.043012 AGGATAAATGATGAGGTGAAGGAGAG 59.957 42.308 0.00 0.00 0.00 3.20
1792 3660 5.907662 AGGATAAATGATGAGGTGAAGGAGA 59.092 40.000 0.00 0.00 0.00 3.71
1793 3661 6.185114 AGGATAAATGATGAGGTGAAGGAG 57.815 41.667 0.00 0.00 0.00 3.69
1794 3662 6.615316 TGTAGGATAAATGATGAGGTGAAGGA 59.385 38.462 0.00 0.00 0.00 3.36
1795 3663 6.830912 TGTAGGATAAATGATGAGGTGAAGG 58.169 40.000 0.00 0.00 0.00 3.46
1796 3664 7.389884 CCATGTAGGATAAATGATGAGGTGAAG 59.610 40.741 0.00 0.00 38.63 3.02
1797 3665 7.226441 CCATGTAGGATAAATGATGAGGTGAA 58.774 38.462 0.00 0.00 38.63 3.18
1798 3666 6.745190 GCCATGTAGGATAAATGATGAGGTGA 60.745 42.308 0.00 0.00 38.63 4.02
1799 3667 5.413833 GCCATGTAGGATAAATGATGAGGTG 59.586 44.000 0.00 0.00 38.63 4.00
1800 3668 5.073554 TGCCATGTAGGATAAATGATGAGGT 59.926 40.000 0.00 0.00 38.63 3.85
1801 3669 5.413833 GTGCCATGTAGGATAAATGATGAGG 59.586 44.000 0.00 0.00 38.63 3.86
1802 3670 6.236409 AGTGCCATGTAGGATAAATGATGAG 58.764 40.000 0.00 0.00 38.63 2.90
1803 3671 6.191657 AGTGCCATGTAGGATAAATGATGA 57.808 37.500 0.00 0.00 38.63 2.92
1804 3672 6.713903 AGAAGTGCCATGTAGGATAAATGATG 59.286 38.462 0.00 0.00 38.63 3.07
1805 3673 6.845908 AGAAGTGCCATGTAGGATAAATGAT 58.154 36.000 0.00 0.00 38.63 2.45
1806 3674 6.252599 AGAAGTGCCATGTAGGATAAATGA 57.747 37.500 0.00 0.00 38.63 2.57
1807 3675 7.933577 TCTTAGAAGTGCCATGTAGGATAAATG 59.066 37.037 0.00 0.00 41.22 2.32
1808 3676 8.034313 TCTTAGAAGTGCCATGTAGGATAAAT 57.966 34.615 0.00 0.00 41.22 1.40
1809 3677 7.432148 TCTTAGAAGTGCCATGTAGGATAAA 57.568 36.000 0.00 0.00 41.22 1.40
1810 3678 7.618019 ATCTTAGAAGTGCCATGTAGGATAA 57.382 36.000 0.00 0.00 41.22 1.75
1811 3679 7.445121 CAATCTTAGAAGTGCCATGTAGGATA 58.555 38.462 0.00 0.00 41.22 2.59
1812 3680 6.294473 CAATCTTAGAAGTGCCATGTAGGAT 58.706 40.000 0.00 0.00 41.22 3.24
1813 3681 5.674525 CAATCTTAGAAGTGCCATGTAGGA 58.325 41.667 0.00 0.00 41.22 2.94
1814 3682 4.274459 GCAATCTTAGAAGTGCCATGTAGG 59.726 45.833 9.33 0.00 41.84 3.18
1815 3683 5.415415 GCAATCTTAGAAGTGCCATGTAG 57.585 43.478 9.33 0.00 0.00 2.74
1822 3690 2.716217 ACTGGGCAATCTTAGAAGTGC 58.284 47.619 11.39 11.39 36.24 4.40
1823 3691 3.691609 GGAACTGGGCAATCTTAGAAGTG 59.308 47.826 0.00 0.00 0.00 3.16
1824 3692 3.589288 AGGAACTGGGCAATCTTAGAAGT 59.411 43.478 0.00 0.00 37.18 3.01
1825 3693 4.227864 AGGAACTGGGCAATCTTAGAAG 57.772 45.455 0.00 0.00 37.18 2.85
1847 3715 3.131046 CCACAGCCCCACTTATGAAAATC 59.869 47.826 0.00 0.00 0.00 2.17
1854 3722 1.966845 AGTACCACAGCCCCACTTAT 58.033 50.000 0.00 0.00 0.00 1.73
1859 3727 1.462432 TGGAAGTACCACAGCCCCA 60.462 57.895 0.00 0.00 44.64 4.96
1954 3832 3.949113 ACAACCTAAAACGGAAGCAAGAA 59.051 39.130 0.00 0.00 0.00 2.52
1959 3837 4.456566 TCCATTACAACCTAAAACGGAAGC 59.543 41.667 0.00 0.00 0.00 3.86
1961 3839 5.048573 GCTTCCATTACAACCTAAAACGGAA 60.049 40.000 0.00 0.00 0.00 4.30
2152 4032 1.421268 TGTGCTGAACAGAAGGATGGT 59.579 47.619 5.97 0.00 33.78 3.55
2706 4617 1.406887 GGCTTGCCTCGGAATAGAACA 60.407 52.381 4.11 0.00 0.00 3.18
2901 4833 5.028549 TCCTACCAGAAGATGCAGAAATC 57.971 43.478 0.00 0.00 0.00 2.17
3003 4936 3.297134 AGCACCTTTTCCTGTTCAAGA 57.703 42.857 0.00 0.00 0.00 3.02
3118 5053 3.237268 AGGTTTTCATGGCAGGTACAA 57.763 42.857 0.00 0.00 0.00 2.41
3411 5461 2.675603 GCGGTGTTTGGTTTCCTTGTTT 60.676 45.455 0.00 0.00 0.00 2.83
3639 5740 7.926555 GCAGGTGTAGCATTACTCTTATTTAGA 59.073 37.037 0.00 0.00 0.00 2.10
3655 5756 7.597743 ACGTAATACTAATTATGCAGGTGTAGC 59.402 37.037 0.00 0.00 37.88 3.58
3656 5757 8.912658 CACGTAATACTAATTATGCAGGTGTAG 58.087 37.037 0.00 0.00 37.88 2.74
3657 5758 8.631797 TCACGTAATACTAATTATGCAGGTGTA 58.368 33.333 0.00 0.00 37.88 2.90
3658 5759 7.494211 TCACGTAATACTAATTATGCAGGTGT 58.506 34.615 0.00 0.00 37.88 4.16
3659 5760 7.940178 TCACGTAATACTAATTATGCAGGTG 57.060 36.000 0.00 0.00 37.88 4.00
3678 5779 5.106869 ATGTTGCACATTACGTTAATCACGT 60.107 36.000 5.25 5.25 46.67 4.49
3679 5780 5.224925 CATGTTGCACATTACGTTAATCACG 59.775 40.000 0.00 0.00 45.47 4.35
3680 5781 5.511377 CCATGTTGCACATTACGTTAATCAC 59.489 40.000 0.00 0.00 36.53 3.06
3681 5782 5.392487 CCCATGTTGCACATTACGTTAATCA 60.392 40.000 0.00 0.00 36.53 2.57
3682 5783 5.034152 CCCATGTTGCACATTACGTTAATC 58.966 41.667 0.00 0.00 36.53 1.75
3683 5784 4.142271 CCCCATGTTGCACATTACGTTAAT 60.142 41.667 0.00 0.00 36.53 1.40
3684 5785 3.191581 CCCCATGTTGCACATTACGTTAA 59.808 43.478 0.00 0.00 36.53 2.01
3685 5786 2.750166 CCCCATGTTGCACATTACGTTA 59.250 45.455 0.00 0.00 36.53 3.18
3686 5787 1.543802 CCCCATGTTGCACATTACGTT 59.456 47.619 0.00 0.00 36.53 3.99
3687 5788 1.173043 CCCCATGTTGCACATTACGT 58.827 50.000 0.00 0.00 36.53 3.57
3688 5789 1.458398 TCCCCATGTTGCACATTACG 58.542 50.000 0.00 0.00 36.53 3.18
3689 5790 4.183101 CAAATCCCCATGTTGCACATTAC 58.817 43.478 0.00 0.00 36.53 1.89
3690 5791 3.837146 ACAAATCCCCATGTTGCACATTA 59.163 39.130 0.00 0.00 36.53 1.90
3691 5792 2.638855 ACAAATCCCCATGTTGCACATT 59.361 40.909 0.00 0.00 36.53 2.71
3692 5793 2.027929 CACAAATCCCCATGTTGCACAT 60.028 45.455 0.00 0.00 39.91 3.21
3693 5794 1.343789 CACAAATCCCCATGTTGCACA 59.656 47.619 0.00 0.00 0.00 4.57
3694 5795 1.617850 TCACAAATCCCCATGTTGCAC 59.382 47.619 0.00 0.00 0.00 4.57
3695 5796 2.006805 TCACAAATCCCCATGTTGCA 57.993 45.000 0.00 0.00 0.00 4.08
3696 5797 3.264104 CAATCACAAATCCCCATGTTGC 58.736 45.455 0.00 0.00 0.00 4.17
3697 5798 3.514706 TCCAATCACAAATCCCCATGTTG 59.485 43.478 0.00 0.00 0.00 3.33
3698 5799 3.770933 CTCCAATCACAAATCCCCATGTT 59.229 43.478 0.00 0.00 0.00 2.71
3699 5800 3.011595 TCTCCAATCACAAATCCCCATGT 59.988 43.478 0.00 0.00 0.00 3.21
3700 5801 3.634504 TCTCCAATCACAAATCCCCATG 58.365 45.455 0.00 0.00 0.00 3.66
3701 5802 4.335735 TTCTCCAATCACAAATCCCCAT 57.664 40.909 0.00 0.00 0.00 4.00
3702 5803 3.824001 TTCTCCAATCACAAATCCCCA 57.176 42.857 0.00 0.00 0.00 4.96
3703 5804 4.344104 TCTTTCTCCAATCACAAATCCCC 58.656 43.478 0.00 0.00 0.00 4.81
3704 5805 4.400567 CCTCTTTCTCCAATCACAAATCCC 59.599 45.833 0.00 0.00 0.00 3.85
3705 5806 4.400567 CCCTCTTTCTCCAATCACAAATCC 59.599 45.833 0.00 0.00 0.00 3.01
3706 5807 5.256474 TCCCTCTTTCTCCAATCACAAATC 58.744 41.667 0.00 0.00 0.00 2.17
3707 5808 5.259632 CTCCCTCTTTCTCCAATCACAAAT 58.740 41.667 0.00 0.00 0.00 2.32
3708 5809 4.507335 CCTCCCTCTTTCTCCAATCACAAA 60.507 45.833 0.00 0.00 0.00 2.83
3709 5810 3.009473 CCTCCCTCTTTCTCCAATCACAA 59.991 47.826 0.00 0.00 0.00 3.33
3710 5811 2.573462 CCTCCCTCTTTCTCCAATCACA 59.427 50.000 0.00 0.00 0.00 3.58
3711 5812 2.840651 TCCTCCCTCTTTCTCCAATCAC 59.159 50.000 0.00 0.00 0.00 3.06
3712 5813 3.205519 TCCTCCCTCTTTCTCCAATCA 57.794 47.619 0.00 0.00 0.00 2.57
3713 5814 3.118075 CCTTCCTCCCTCTTTCTCCAATC 60.118 52.174 0.00 0.00 0.00 2.67
3714 5815 2.849318 CCTTCCTCCCTCTTTCTCCAAT 59.151 50.000 0.00 0.00 0.00 3.16
3715 5816 2.269940 CCTTCCTCCCTCTTTCTCCAA 58.730 52.381 0.00 0.00 0.00 3.53
3716 5817 1.555765 CCCTTCCTCCCTCTTTCTCCA 60.556 57.143 0.00 0.00 0.00 3.86
3717 5818 1.208706 CCCTTCCTCCCTCTTTCTCC 58.791 60.000 0.00 0.00 0.00 3.71
3718 5819 1.208706 CCCCTTCCTCCCTCTTTCTC 58.791 60.000 0.00 0.00 0.00 2.87
3719 5820 0.916845 GCCCCTTCCTCCCTCTTTCT 60.917 60.000 0.00 0.00 0.00 2.52
3720 5821 1.610327 GCCCCTTCCTCCCTCTTTC 59.390 63.158 0.00 0.00 0.00 2.62
3721 5822 1.931180 GGCCCCTTCCTCCCTCTTT 60.931 63.158 0.00 0.00 0.00 2.52
3722 5823 2.286502 GGCCCCTTCCTCCCTCTT 60.287 66.667 0.00 0.00 0.00 2.85
3723 5824 4.439901 GGGCCCCTTCCTCCCTCT 62.440 72.222 12.23 0.00 37.08 3.69
3724 5825 4.760220 TGGGCCCCTTCCTCCCTC 62.760 72.222 22.27 0.00 40.69 4.30
3759 5860 2.553247 CCAAACAAACTCTCTCTCCCCC 60.553 54.545 0.00 0.00 0.00 5.40
3760 5861 2.372172 TCCAAACAAACTCTCTCTCCCC 59.628 50.000 0.00 0.00 0.00 4.81
3761 5862 3.771577 TCCAAACAAACTCTCTCTCCC 57.228 47.619 0.00 0.00 0.00 4.30
3762 5863 6.641169 AAATTCCAAACAAACTCTCTCTCC 57.359 37.500 0.00 0.00 0.00 3.71
3763 5864 7.798982 CGTAAAATTCCAAACAAACTCTCTCTC 59.201 37.037 0.00 0.00 0.00 3.20
3764 5865 7.282450 ACGTAAAATTCCAAACAAACTCTCTCT 59.718 33.333 0.00 0.00 0.00 3.10
3765 5866 7.415229 ACGTAAAATTCCAAACAAACTCTCTC 58.585 34.615 0.00 0.00 0.00 3.20
3766 5867 7.329588 ACGTAAAATTCCAAACAAACTCTCT 57.670 32.000 0.00 0.00 0.00 3.10
3767 5868 9.505995 TTTACGTAAAATTCCAAACAAACTCTC 57.494 29.630 18.10 0.00 0.00 3.20
3768 5869 9.857957 TTTTACGTAAAATTCCAAACAAACTCT 57.142 25.926 25.60 0.00 30.83 3.24
3771 5872 9.201424 GCTTTTTACGTAAAATTCCAAACAAAC 57.799 29.630 28.69 7.43 35.29 2.93
3772 5873 9.152595 AGCTTTTTACGTAAAATTCCAAACAAA 57.847 25.926 28.69 12.60 35.29 2.83
3773 5874 8.705048 AGCTTTTTACGTAAAATTCCAAACAA 57.295 26.923 28.69 13.22 35.29 2.83
3774 5875 8.705048 AAGCTTTTTACGTAAAATTCCAAACA 57.295 26.923 28.69 13.82 35.29 2.83
3775 5876 7.994343 CGAAGCTTTTTACGTAAAATTCCAAAC 59.006 33.333 28.69 17.17 35.29 2.93
3776 5877 7.701501 ACGAAGCTTTTTACGTAAAATTCCAAA 59.298 29.630 28.69 15.05 35.29 3.28
3777 5878 7.194962 ACGAAGCTTTTTACGTAAAATTCCAA 58.805 30.769 28.69 15.67 35.29 3.53
3778 5879 6.727215 ACGAAGCTTTTTACGTAAAATTCCA 58.273 32.000 28.69 15.98 35.29 3.53
3779 5880 7.479603 CCTACGAAGCTTTTTACGTAAAATTCC 59.520 37.037 28.69 20.16 39.91 3.01
3780 5881 8.223100 TCCTACGAAGCTTTTTACGTAAAATTC 58.777 33.333 28.69 25.65 39.91 2.17
3781 5882 8.086851 TCCTACGAAGCTTTTTACGTAAAATT 57.913 30.769 28.69 21.38 39.91 1.82
3782 5883 7.656707 TCCTACGAAGCTTTTTACGTAAAAT 57.343 32.000 28.69 17.01 39.91 1.82
3783 5884 7.656707 ATCCTACGAAGCTTTTTACGTAAAA 57.343 32.000 25.60 25.60 39.91 1.52
3784 5885 7.656707 AATCCTACGAAGCTTTTTACGTAAA 57.343 32.000 16.59 16.59 39.91 2.01
3785 5886 8.173321 GTAATCCTACGAAGCTTTTTACGTAA 57.827 34.615 16.06 3.29 39.91 3.18
3786 5887 7.740519 GTAATCCTACGAAGCTTTTTACGTA 57.259 36.000 14.93 14.93 39.59 3.57
3787 5888 6.638168 GTAATCCTACGAAGCTTTTTACGT 57.362 37.500 14.32 14.32 41.66 3.57
3801 5902 5.979288 ATCCTACATCCACGTAATCCTAC 57.021 43.478 0.00 0.00 0.00 3.18
3802 5903 6.989155 AAATCCTACATCCACGTAATCCTA 57.011 37.500 0.00 0.00 0.00 2.94
3803 5904 5.888982 AAATCCTACATCCACGTAATCCT 57.111 39.130 0.00 0.00 0.00 3.24
3804 5905 6.053005 TGAAAATCCTACATCCACGTAATCC 58.947 40.000 0.00 0.00 0.00 3.01
3805 5906 6.292919 GCTGAAAATCCTACATCCACGTAATC 60.293 42.308 0.00 0.00 0.00 1.75
3806 5907 5.527582 GCTGAAAATCCTACATCCACGTAAT 59.472 40.000 0.00 0.00 0.00 1.89
3807 5908 4.873827 GCTGAAAATCCTACATCCACGTAA 59.126 41.667 0.00 0.00 0.00 3.18
3808 5909 4.161565 AGCTGAAAATCCTACATCCACGTA 59.838 41.667 0.00 0.00 0.00 3.57
3809 5910 3.055094 AGCTGAAAATCCTACATCCACGT 60.055 43.478 0.00 0.00 0.00 4.49
3810 5911 3.535561 AGCTGAAAATCCTACATCCACG 58.464 45.455 0.00 0.00 0.00 4.94
3811 5912 7.573968 ATTTAGCTGAAAATCCTACATCCAC 57.426 36.000 0.00 0.00 0.00 4.02
3812 5913 9.866655 ATAATTTAGCTGAAAATCCTACATCCA 57.133 29.630 0.00 0.00 0.00 3.41
3819 5920 9.638176 ACTGATGATAATTTAGCTGAAAATCCT 57.362 29.630 0.00 0.00 0.00 3.24
3823 5924 9.859427 CCAAACTGATGATAATTTAGCTGAAAA 57.141 29.630 0.00 0.00 0.00 2.29
3824 5925 9.023962 ACCAAACTGATGATAATTTAGCTGAAA 57.976 29.630 0.00 0.00 0.00 2.69
3825 5926 8.579850 ACCAAACTGATGATAATTTAGCTGAA 57.420 30.769 0.00 0.00 0.00 3.02
3826 5927 9.330063 CTACCAAACTGATGATAATTTAGCTGA 57.670 33.333 0.00 0.00 0.00 4.26
3827 5928 9.330063 TCTACCAAACTGATGATAATTTAGCTG 57.670 33.333 0.00 0.00 0.00 4.24
3828 5929 9.905713 TTCTACCAAACTGATGATAATTTAGCT 57.094 29.630 0.00 0.00 0.00 3.32
3833 5934 8.960591 CCACTTTCTACCAAACTGATGATAATT 58.039 33.333 0.00 0.00 0.00 1.40
3834 5935 7.557719 CCCACTTTCTACCAAACTGATGATAAT 59.442 37.037 0.00 0.00 0.00 1.28
3835 5936 6.884295 CCCACTTTCTACCAAACTGATGATAA 59.116 38.462 0.00 0.00 0.00 1.75
3836 5937 6.214615 TCCCACTTTCTACCAAACTGATGATA 59.785 38.462 0.00 0.00 0.00 2.15
4445 8736 4.741928 ACCTTTGGGGATATAACCATCC 57.258 45.455 0.99 0.00 43.36 3.51
4470 8761 7.054124 ACTCTTTAAGTTTGTCAGATTGACCA 58.946 34.615 6.74 0.00 40.00 4.02
4641 8934 5.472148 TCCAAAAGCTGCAATTGAGTAATG 58.528 37.500 10.34 0.00 0.00 1.90
4734 9027 8.451748 GTGATTCAAAAGTCAGTAGGGTAATTC 58.548 37.037 0.00 0.00 0.00 2.17
4878 9171 6.749139 ACTCCTTCAGTAAATTTTGGCTTTC 58.251 36.000 0.00 0.00 31.37 2.62
4888 9181 5.194432 TCGAGCTCTACTCCTTCAGTAAAT 58.806 41.667 12.85 0.00 43.01 1.40
4919 9212 1.351017 AGCAAAAGGAATCCGGTGAGA 59.649 47.619 0.00 0.00 0.00 3.27
4925 9218 6.194796 TCTATCAAAAGCAAAAGGAATCCG 57.805 37.500 0.00 0.00 0.00 4.18
4967 9263 2.552315 ACGATACAACACCCTTTGCAAG 59.448 45.455 0.00 0.00 0.00 4.01
4973 9269 3.620427 TGCATACGATACAACACCCTT 57.380 42.857 0.00 0.00 0.00 3.95
5013 9309 7.823799 ACAAAATTGGCAGTTATATTTTCCCAG 59.176 33.333 4.32 0.00 30.17 4.45
5112 9409 4.201851 CCAGAATTGCGTTTACATGGAGAG 60.202 45.833 0.00 0.00 0.00 3.20
5131 9428 2.239654 GACATCACATTTCTCCCCCAGA 59.760 50.000 0.00 0.00 0.00 3.86
5196 9495 8.818057 CACCAGCTTAGTTTCATACAACTATAC 58.182 37.037 0.00 0.00 38.71 1.47
5227 9531 1.286248 AGTTGTAATTCCTCCGGCCT 58.714 50.000 0.00 0.00 0.00 5.19
5228 9532 2.994186 TAGTTGTAATTCCTCCGGCC 57.006 50.000 0.00 0.00 0.00 6.13
5230 9534 4.120589 GAGCTTAGTTGTAATTCCTCCGG 58.879 47.826 0.00 0.00 0.00 5.14
5231 9535 4.567159 GTGAGCTTAGTTGTAATTCCTCCG 59.433 45.833 0.00 0.00 0.00 4.63
5233 9537 6.595716 ACATGTGAGCTTAGTTGTAATTCCTC 59.404 38.462 0.00 0.00 0.00 3.71
5234 9538 6.476378 ACATGTGAGCTTAGTTGTAATTCCT 58.524 36.000 0.00 0.00 0.00 3.36
5235 9539 6.743575 ACATGTGAGCTTAGTTGTAATTCC 57.256 37.500 0.00 0.00 0.00 3.01
5236 9540 9.463443 AAAAACATGTGAGCTTAGTTGTAATTC 57.537 29.630 0.00 0.00 0.00 2.17
5238 9542 9.893305 GTAAAAACATGTGAGCTTAGTTGTAAT 57.107 29.630 0.00 0.00 0.00 1.89
5239 9543 9.116067 AGTAAAAACATGTGAGCTTAGTTGTAA 57.884 29.630 0.00 0.00 0.00 2.41
5240 9544 8.671384 AGTAAAAACATGTGAGCTTAGTTGTA 57.329 30.769 0.00 0.00 0.00 2.41
5242 9546 8.128582 TCAAGTAAAAACATGTGAGCTTAGTTG 58.871 33.333 19.19 19.19 33.76 3.16
5243 9547 8.220755 TCAAGTAAAAACATGTGAGCTTAGTT 57.779 30.769 0.00 1.94 0.00 2.24
5244 9548 7.801716 TCAAGTAAAAACATGTGAGCTTAGT 57.198 32.000 0.00 0.00 0.00 2.24
5245 9549 9.173939 CTTTCAAGTAAAAACATGTGAGCTTAG 57.826 33.333 0.00 0.00 0.00 2.18
5246 9550 7.647715 GCTTTCAAGTAAAAACATGTGAGCTTA 59.352 33.333 0.00 0.00 0.00 3.09
5247 9551 6.476706 GCTTTCAAGTAAAAACATGTGAGCTT 59.523 34.615 0.00 0.00 0.00 3.74
5250 9554 5.399301 CCGCTTTCAAGTAAAAACATGTGAG 59.601 40.000 0.00 0.00 0.00 3.51
5252 9556 4.085107 GCCGCTTTCAAGTAAAAACATGTG 60.085 41.667 0.00 0.00 0.00 3.21
5255 9559 3.305110 CGCCGCTTTCAAGTAAAAACAT 58.695 40.909 0.00 0.00 0.00 2.71
5256 9560 2.722071 CGCCGCTTTCAAGTAAAAACA 58.278 42.857 0.00 0.00 0.00 2.83
5257 9561 1.450533 GCGCCGCTTTCAAGTAAAAAC 59.549 47.619 0.00 0.00 0.00 2.43
5258 9562 1.761206 GCGCCGCTTTCAAGTAAAAA 58.239 45.000 0.00 0.00 0.00 1.94
5259 9563 0.384974 CGCGCCGCTTTCAAGTAAAA 60.385 50.000 7.78 0.00 0.00 1.52
5260 9564 1.205568 CGCGCCGCTTTCAAGTAAA 59.794 52.632 7.78 0.00 0.00 2.01
5263 9567 4.980805 TCCGCGCCGCTTTCAAGT 62.981 61.111 7.78 0.00 0.00 3.16
5264 9568 3.440356 GATCCGCGCCGCTTTCAAG 62.440 63.158 7.78 0.00 0.00 3.02
5265 9569 3.496131 GATCCGCGCCGCTTTCAA 61.496 61.111 7.78 0.00 0.00 2.69
5286 9590 3.916544 TAGGGATGCAGAGCGGCG 61.917 66.667 0.51 0.51 36.28 6.46
5287 9591 2.280457 GTAGGGATGCAGAGCGGC 60.280 66.667 0.00 0.00 0.00 6.53
5288 9592 2.093537 GAGGTAGGGATGCAGAGCGG 62.094 65.000 0.00 0.00 0.00 5.52
5289 9593 1.365633 GAGGTAGGGATGCAGAGCG 59.634 63.158 0.00 0.00 0.00 5.03
5290 9594 1.050988 TGGAGGTAGGGATGCAGAGC 61.051 60.000 0.00 0.00 0.00 4.09
5291 9595 1.500474 TTGGAGGTAGGGATGCAGAG 58.500 55.000 0.00 0.00 0.00 3.35
5292 9596 2.196742 ATTGGAGGTAGGGATGCAGA 57.803 50.000 0.00 0.00 0.00 4.26
5293 9597 4.137543 GTTTATTGGAGGTAGGGATGCAG 58.862 47.826 0.00 0.00 0.00 4.41
5294 9598 3.117663 GGTTTATTGGAGGTAGGGATGCA 60.118 47.826 0.00 0.00 0.00 3.96
5295 9599 3.138468 AGGTTTATTGGAGGTAGGGATGC 59.862 47.826 0.00 0.00 0.00 3.91
5296 9600 4.660771 AGAGGTTTATTGGAGGTAGGGATG 59.339 45.833 0.00 0.00 0.00 3.51
5297 9601 4.909284 AGAGGTTTATTGGAGGTAGGGAT 58.091 43.478 0.00 0.00 0.00 3.85
5298 9602 4.363546 AGAGGTTTATTGGAGGTAGGGA 57.636 45.455 0.00 0.00 0.00 4.20
5299 9603 5.666265 ACTAAGAGGTTTATTGGAGGTAGGG 59.334 44.000 0.00 0.00 0.00 3.53
5300 9604 6.809976 ACTAAGAGGTTTATTGGAGGTAGG 57.190 41.667 0.00 0.00 0.00 3.18
5301 9605 8.947115 CAAAACTAAGAGGTTTATTGGAGGTAG 58.053 37.037 0.00 0.00 31.70 3.18
5353 9673 2.954318 ACATCTGCACAAGCTTTTCTGT 59.046 40.909 0.00 0.00 42.74 3.41
5365 9685 3.146066 TGGACTAACCAAACATCTGCAC 58.854 45.455 0.00 0.00 46.75 4.57
5457 9809 2.148916 TATCGTCCATCCATCGTTGC 57.851 50.000 0.00 0.00 0.00 4.17
5462 9814 5.934043 TCACATGATTTATCGTCCATCCATC 59.066 40.000 0.00 0.00 0.00 3.51
5463 9815 5.868454 TCACATGATTTATCGTCCATCCAT 58.132 37.500 0.00 0.00 0.00 3.41
5464 9816 5.289083 TCACATGATTTATCGTCCATCCA 57.711 39.130 0.00 0.00 0.00 3.41
5466 9818 4.153117 GCCTCACATGATTTATCGTCCATC 59.847 45.833 0.00 0.00 0.00 3.51
5467 9819 4.067896 GCCTCACATGATTTATCGTCCAT 58.932 43.478 0.00 0.00 0.00 3.41
5468 9820 3.134623 AGCCTCACATGATTTATCGTCCA 59.865 43.478 0.00 0.00 0.00 4.02
5470 9822 4.371786 TGAGCCTCACATGATTTATCGTC 58.628 43.478 0.00 0.00 0.00 4.20
5471 9823 4.406648 TGAGCCTCACATGATTTATCGT 57.593 40.909 0.00 0.00 0.00 3.73
5472 9824 5.505286 GTTTGAGCCTCACATGATTTATCG 58.495 41.667 0.00 0.00 0.00 2.92
5477 9829 2.086869 CCGTTTGAGCCTCACATGATT 58.913 47.619 0.00 0.00 0.00 2.57
5519 9871 2.449137 ATTTCCCTTGGAGCCTCATG 57.551 50.000 0.00 0.00 31.21 3.07
5521 9873 3.397527 AGATATTTCCCTTGGAGCCTCA 58.602 45.455 0.00 0.00 31.21 3.86
5522 9874 4.445557 AAGATATTTCCCTTGGAGCCTC 57.554 45.455 0.00 0.00 31.21 4.70
5523 9875 4.540715 CAAAGATATTTCCCTTGGAGCCT 58.459 43.478 0.00 0.00 31.21 4.58
5524 9876 3.068732 GCAAAGATATTTCCCTTGGAGCC 59.931 47.826 0.00 0.00 31.21 4.70
5525 9877 3.701040 TGCAAAGATATTTCCCTTGGAGC 59.299 43.478 0.00 0.00 31.21 4.70
5526 9878 5.920193 TTGCAAAGATATTTCCCTTGGAG 57.080 39.130 0.00 0.00 31.21 3.86
5527 9879 6.872585 ATTTGCAAAGATATTTCCCTTGGA 57.127 33.333 18.19 0.00 0.00 3.53
5528 9880 9.264719 GAATATTTGCAAAGATATTTCCCTTGG 57.735 33.333 18.97 0.00 30.68 3.61
5529 9881 9.264719 GGAATATTTGCAAAGATATTTCCCTTG 57.735 33.333 18.97 0.00 30.68 3.61
5581 9945 3.330720 AAGAACGAGGGGCAGGGG 61.331 66.667 0.00 0.00 0.00 4.79
5582 9946 2.269241 GAAGAACGAGGGGCAGGG 59.731 66.667 0.00 0.00 0.00 4.45
5583 9947 2.269241 GGAAGAACGAGGGGCAGG 59.731 66.667 0.00 0.00 0.00 4.85
5626 9990 2.047769 GACAGATATCGTCGAGCTTGC 58.952 52.381 0.00 0.00 0.00 4.01
5729 10093 4.837860 ACATGGGCATAAAAGTTCAGGAAA 59.162 37.500 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.