Multiple sequence alignment - TraesCS6B01G185900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G185900 chr6B 100.000 3247 0 0 1 3247 212159190 212155944 0.000000e+00 5997.0
1 TraesCS6B01G185900 chr6B 94.169 1252 42 11 1048 2275 533180246 533179002 0.000000e+00 1879.0
2 TraesCS6B01G185900 chr6B 93.398 727 27 10 1 725 213487833 213487126 0.000000e+00 1057.0
3 TraesCS6B01G185900 chr6B 88.915 433 15 1 2591 2990 533178835 533178403 1.340000e-138 503.0
4 TraesCS6B01G185900 chr6B 90.741 162 10 4 2375 2536 533179009 533178853 9.130000e-51 211.0
5 TraesCS6B01G185900 chr4A 95.040 1976 51 12 1045 2975 659120467 659122440 0.000000e+00 3062.0
6 TraesCS6B01G185900 chr2B 88.896 1675 81 26 1048 2639 746350337 746348685 0.000000e+00 1965.0
7 TraesCS6B01G185900 chr2B 88.790 1347 100 16 1048 2343 773579629 773578283 0.000000e+00 1604.0
8 TraesCS6B01G185900 chr2B 92.593 729 34 8 2359 3070 773578227 773577502 0.000000e+00 1029.0
9 TraesCS6B01G185900 chr2B 88.889 108 10 2 714 819 718968596 718968489 7.310000e-27 132.0
10 TraesCS6B01G185900 chr2B 93.023 86 6 0 734 819 117994965 117995050 3.400000e-25 126.0
11 TraesCS6B01G185900 chr1B 94.960 1250 33 12 1046 2272 645522562 645523804 0.000000e+00 1932.0
12 TraesCS6B01G185900 chr1B 95.274 529 24 1 2719 3247 645524136 645524663 0.000000e+00 837.0
13 TraesCS6B01G185900 chr1B 91.358 162 9 4 2375 2536 645523800 645523956 1.960000e-52 217.0
14 TraesCS6B01G185900 chr1B 92.857 98 6 1 723 819 194375543 194375640 1.210000e-29 141.0
15 TraesCS6B01G185900 chr1B 89.691 97 9 1 724 819 458380424 458380328 4.400000e-24 122.0
16 TraesCS6B01G185900 chr1B 79.641 167 24 7 865 1023 628492230 628492066 9.520000e-21 111.0
17 TraesCS6B01G185900 chr7B 94.661 1255 36 13 1045 2275 745283442 745282195 0.000000e+00 1917.0
18 TraesCS6B01G185900 chr7B 92.609 690 18 1 2591 3247 745282028 745281339 0.000000e+00 961.0
19 TraesCS6B01G185900 chr7B 91.358 162 9 4 2375 2536 745282202 745282046 1.960000e-52 217.0
20 TraesCS6B01G185900 chr7B 89.000 100 10 1 721 819 481067965 481068064 4.400000e-24 122.0
21 TraesCS6B01G185900 chr5A 88.041 1363 94 22 1045 2343 276126924 276128281 0.000000e+00 1550.0
22 TraesCS6B01G185900 chr5A 92.117 926 47 11 2341 3247 276128319 276129237 0.000000e+00 1282.0
23 TraesCS6B01G185900 chr5A 87.425 167 14 4 865 1024 513890186 513890020 5.530000e-43 185.0
24 TraesCS6B01G185900 chr5A 85.542 166 17 4 865 1023 617216734 617216569 2.000000e-37 167.0
25 TraesCS6B01G185900 chr5A 82.143 168 23 3 864 1024 616046968 616047135 1.570000e-28 137.0
26 TraesCS6B01G185900 chr4B 92.357 929 42 16 2341 3247 169003722 169004643 0.000000e+00 1295.0
27 TraesCS6B01G185900 chr4B 90.779 976 52 12 1400 2343 169002715 169003684 0.000000e+00 1269.0
28 TraesCS6B01G185900 chr4B 88.720 328 30 5 1045 1368 169002399 169002723 8.440000e-106 394.0
29 TraesCS6B01G185900 chr4B 90.722 97 8 1 724 819 328947046 328947142 9.460000e-26 128.0
30 TraesCS6B01G185900 chr4B 89.691 97 9 1 724 819 345588595 345588691 4.400000e-24 122.0
31 TraesCS6B01G185900 chr6D 94.391 731 30 8 1 724 121064983 121065709 0.000000e+00 1112.0
32 TraesCS6B01G185900 chr6D 91.474 821 43 9 1 809 121579965 121579160 0.000000e+00 1103.0
33 TraesCS6B01G185900 chr6D 94.282 682 27 2 1 674 121226053 121226730 0.000000e+00 1033.0
34 TraesCS6B01G185900 chr6D 91.176 68 2 2 659 725 121261056 121261120 4.460000e-14 89.8
35 TraesCS6B01G185900 chr6A 93.869 734 24 6 1 725 158317349 158316628 0.000000e+00 1086.0
36 TraesCS6B01G185900 chr6A 96.545 521 18 0 1 521 162890968 162890448 0.000000e+00 863.0
37 TraesCS6B01G185900 chr6A 89.583 672 29 12 63 725 158449078 158448439 0.000000e+00 815.0
38 TraesCS6B01G185900 chr6A 86.853 251 14 7 489 725 162890449 162890204 2.480000e-66 263.0
39 TraesCS6B01G185900 chr6A 100.000 68 0 0 1 68 158454437 158454370 3.400000e-25 126.0
40 TraesCS6B01G185900 chr4D 87.169 982 84 21 1048 2002 315057579 315058545 0.000000e+00 1077.0
41 TraesCS6B01G185900 chr4D 87.856 914 78 15 2341 3247 315058961 315059848 0.000000e+00 1042.0
42 TraesCS6B01G185900 chr2A 88.444 900 67 14 2347 3245 616232715 616231852 0.000000e+00 1051.0
43 TraesCS6B01G185900 chr2A 85.936 903 87 13 2347 3247 585218429 585219293 0.000000e+00 928.0
44 TraesCS6B01G185900 chr2A 95.238 63 3 0 1987 2049 585218072 585218134 2.060000e-17 100.0
45 TraesCS6B01G185900 chr7D 87.775 908 65 14 2341 3247 232937020 232937882 0.000000e+00 1020.0
46 TraesCS6B01G185900 chr7D 84.989 886 54 25 1397 2205 232935987 232936870 0.000000e+00 826.0
47 TraesCS6B01G185900 chr7D 90.549 328 26 4 1049 1371 232935671 232935998 2.310000e-116 429.0
48 TraesCS6B01G185900 chr7D 83.055 419 61 9 2818 3232 570616582 570616994 3.960000e-99 372.0
49 TraesCS6B01G185900 chr3B 90.381 551 46 4 1122 1666 752264359 752264908 0.000000e+00 717.0
50 TraesCS6B01G185900 chr3B 86.826 167 14 4 865 1024 103911122 103910957 2.570000e-41 180.0
51 TraesCS6B01G185900 chr5B 95.732 164 6 1 3084 3247 314231440 314231278 2.480000e-66 263.0
52 TraesCS6B01G185900 chr3A 88.024 167 13 4 864 1023 9303248 9303414 1.190000e-44 191.0
53 TraesCS6B01G185900 chr3A 87.952 166 13 4 865 1023 564326949 564327114 4.280000e-44 189.0
54 TraesCS6B01G185900 chr7A 86.905 168 12 7 866 1023 270961481 270961648 2.570000e-41 180.0
55 TraesCS6B01G185900 chr1A 85.185 162 14 7 874 1027 579158381 579158222 1.210000e-34 158.0
56 TraesCS6B01G185900 chr1D 88.889 99 10 1 722 819 473539222 473539124 1.580000e-23 121.0
57 TraesCS6B01G185900 chr5D 86.364 110 13 2 723 830 51073285 51073394 5.690000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G185900 chr6B 212155944 212159190 3246 True 5997.000000 5997 100.000000 1 3247 1 chr6B.!!$R1 3246
1 TraesCS6B01G185900 chr6B 213487126 213487833 707 True 1057.000000 1057 93.398000 1 725 1 chr6B.!!$R2 724
2 TraesCS6B01G185900 chr6B 533178403 533180246 1843 True 864.333333 1879 91.275000 1048 2990 3 chr6B.!!$R3 1942
3 TraesCS6B01G185900 chr4A 659120467 659122440 1973 False 3062.000000 3062 95.040000 1045 2975 1 chr4A.!!$F1 1930
4 TraesCS6B01G185900 chr2B 746348685 746350337 1652 True 1965.000000 1965 88.896000 1048 2639 1 chr2B.!!$R2 1591
5 TraesCS6B01G185900 chr2B 773577502 773579629 2127 True 1316.500000 1604 90.691500 1048 3070 2 chr2B.!!$R3 2022
6 TraesCS6B01G185900 chr1B 645522562 645524663 2101 False 995.333333 1932 93.864000 1046 3247 3 chr1B.!!$F2 2201
7 TraesCS6B01G185900 chr7B 745281339 745283442 2103 True 1031.666667 1917 92.876000 1045 3247 3 chr7B.!!$R1 2202
8 TraesCS6B01G185900 chr5A 276126924 276129237 2313 False 1416.000000 1550 90.079000 1045 3247 2 chr5A.!!$F2 2202
9 TraesCS6B01G185900 chr4B 169002399 169004643 2244 False 986.000000 1295 90.618667 1045 3247 3 chr4B.!!$F3 2202
10 TraesCS6B01G185900 chr6D 121064983 121065709 726 False 1112.000000 1112 94.391000 1 724 1 chr6D.!!$F1 723
11 TraesCS6B01G185900 chr6D 121579160 121579965 805 True 1103.000000 1103 91.474000 1 809 1 chr6D.!!$R1 808
12 TraesCS6B01G185900 chr6D 121226053 121226730 677 False 1033.000000 1033 94.282000 1 674 1 chr6D.!!$F2 673
13 TraesCS6B01G185900 chr6A 158316628 158317349 721 True 1086.000000 1086 93.869000 1 725 1 chr6A.!!$R1 724
14 TraesCS6B01G185900 chr6A 158448439 158449078 639 True 815.000000 815 89.583000 63 725 1 chr6A.!!$R2 662
15 TraesCS6B01G185900 chr6A 162890204 162890968 764 True 563.000000 863 91.699000 1 725 2 chr6A.!!$R4 724
16 TraesCS6B01G185900 chr4D 315057579 315059848 2269 False 1059.500000 1077 87.512500 1048 3247 2 chr4D.!!$F1 2199
17 TraesCS6B01G185900 chr2A 616231852 616232715 863 True 1051.000000 1051 88.444000 2347 3245 1 chr2A.!!$R1 898
18 TraesCS6B01G185900 chr2A 585218072 585219293 1221 False 514.000000 928 90.587000 1987 3247 2 chr2A.!!$F1 1260
19 TraesCS6B01G185900 chr7D 232935671 232937882 2211 False 758.333333 1020 87.771000 1049 3247 3 chr7D.!!$F2 2198
20 TraesCS6B01G185900 chr3B 752264359 752264908 549 False 717.000000 717 90.381000 1122 1666 1 chr3B.!!$F1 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
522 523 0.037046 TGTGCGTGCTGATCATCTGT 60.037 50.0 0.0 0.0 0.0 3.41 F
919 920 0.039618 GGCCCACCCTGAGATTTGAA 59.960 55.0 0.0 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1520 1613 0.240945 GAACAACCAACCCTCATGCG 59.759 55.00 0.0 0.0 0.00 4.73 R
2337 2805 5.880054 TTGCTACTAAGTTTCCTTGCATC 57.120 39.13 0.0 0.0 29.31 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
491 492 0.829182 CCACCAAAGAGCTGGCCTTT 60.829 55.000 3.32 0.00 40.45 3.11
497 498 3.582780 CAAAGAGCTGGCCTTTTGATTC 58.417 45.455 3.32 0.00 32.04 2.52
499 500 1.076024 AGAGCTGGCCTTTTGATTCCA 59.924 47.619 3.32 0.00 0.00 3.53
500 501 1.895131 GAGCTGGCCTTTTGATTCCAA 59.105 47.619 3.32 0.00 0.00 3.53
501 502 2.299867 GAGCTGGCCTTTTGATTCCAAA 59.700 45.455 3.32 0.00 40.24 3.28
502 503 2.705127 AGCTGGCCTTTTGATTCCAAAA 59.295 40.909 3.32 0.00 46.55 2.44
511 512 2.063156 TGATTCCAAAATGTGCGTGC 57.937 45.000 0.00 0.00 0.00 5.34
512 513 1.612950 TGATTCCAAAATGTGCGTGCT 59.387 42.857 0.00 0.00 0.00 4.40
513 514 1.987770 GATTCCAAAATGTGCGTGCTG 59.012 47.619 0.00 0.00 0.00 4.41
514 515 1.028130 TTCCAAAATGTGCGTGCTGA 58.972 45.000 0.00 0.00 0.00 4.26
515 516 1.246649 TCCAAAATGTGCGTGCTGAT 58.753 45.000 0.00 0.00 0.00 2.90
516 517 1.199789 TCCAAAATGTGCGTGCTGATC 59.800 47.619 0.00 0.00 0.00 2.92
517 518 1.068402 CCAAAATGTGCGTGCTGATCA 60.068 47.619 0.00 0.00 0.00 2.92
518 519 2.416296 CCAAAATGTGCGTGCTGATCAT 60.416 45.455 0.00 0.00 0.00 2.45
519 520 2.838386 AAATGTGCGTGCTGATCATC 57.162 45.000 0.00 0.00 0.00 2.92
520 521 2.034104 AATGTGCGTGCTGATCATCT 57.966 45.000 0.00 0.00 0.00 2.90
521 522 1.296727 ATGTGCGTGCTGATCATCTG 58.703 50.000 0.00 0.00 0.00 2.90
522 523 0.037046 TGTGCGTGCTGATCATCTGT 60.037 50.000 0.00 0.00 0.00 3.41
523 524 0.649475 GTGCGTGCTGATCATCTGTC 59.351 55.000 0.00 0.00 0.00 3.51
524 525 0.803380 TGCGTGCTGATCATCTGTCG 60.803 55.000 0.00 0.79 0.00 4.35
525 526 0.803768 GCGTGCTGATCATCTGTCGT 60.804 55.000 0.00 0.00 0.00 4.34
526 527 0.919300 CGTGCTGATCATCTGTCGTG 59.081 55.000 0.00 0.00 0.00 4.35
527 528 1.468054 CGTGCTGATCATCTGTCGTGA 60.468 52.381 0.00 0.00 0.00 4.35
528 529 2.610433 GTGCTGATCATCTGTCGTGAA 58.390 47.619 0.00 0.00 0.00 3.18
529 530 2.346847 GTGCTGATCATCTGTCGTGAAC 59.653 50.000 0.00 0.00 0.00 3.18
530 531 2.232208 TGCTGATCATCTGTCGTGAACT 59.768 45.455 0.00 0.00 0.00 3.01
531 532 2.857152 GCTGATCATCTGTCGTGAACTC 59.143 50.000 0.00 0.00 0.00 3.01
532 533 3.104470 CTGATCATCTGTCGTGAACTCG 58.896 50.000 0.00 0.00 0.00 4.18
533 534 2.488153 TGATCATCTGTCGTGAACTCGT 59.512 45.455 0.00 0.00 0.00 4.18
534 535 2.613730 TCATCTGTCGTGAACTCGTC 57.386 50.000 0.00 0.00 0.00 4.20
535 536 1.877443 TCATCTGTCGTGAACTCGTCA 59.123 47.619 0.00 0.00 0.00 4.35
536 537 2.488153 TCATCTGTCGTGAACTCGTCAT 59.512 45.455 0.00 0.00 38.90 3.06
537 538 3.057526 TCATCTGTCGTGAACTCGTCATT 60.058 43.478 0.00 0.00 38.90 2.57
538 539 2.929960 TCTGTCGTGAACTCGTCATTC 58.070 47.619 0.00 0.00 38.90 2.67
539 540 2.552743 TCTGTCGTGAACTCGTCATTCT 59.447 45.455 0.00 0.00 38.90 2.40
540 541 2.658802 CTGTCGTGAACTCGTCATTCTG 59.341 50.000 0.00 0.00 38.90 3.02
541 542 2.034179 TGTCGTGAACTCGTCATTCTGT 59.966 45.455 0.00 0.00 38.90 3.41
542 543 2.657372 GTCGTGAACTCGTCATTCTGTC 59.343 50.000 0.00 0.00 38.90 3.51
543 544 1.644295 CGTGAACTCGTCATTCTGTCG 59.356 52.381 0.00 0.00 38.90 4.35
544 545 1.387084 GTGAACTCGTCATTCTGTCGC 59.613 52.381 0.00 0.00 38.90 5.19
545 546 0.992802 GAACTCGTCATTCTGTCGCC 59.007 55.000 0.00 0.00 0.00 5.54
546 547 0.603569 AACTCGTCATTCTGTCGCCT 59.396 50.000 0.00 0.00 0.00 5.52
547 548 0.109086 ACTCGTCATTCTGTCGCCTG 60.109 55.000 0.00 0.00 0.00 4.85
548 549 1.416813 CTCGTCATTCTGTCGCCTGC 61.417 60.000 0.00 0.00 0.00 4.85
549 550 2.792290 CGTCATTCTGTCGCCTGCG 61.792 63.158 4.92 4.92 41.35 5.18
550 551 1.446099 GTCATTCTGTCGCCTGCGA 60.446 57.895 10.61 10.61 46.87 5.10
558 559 3.135457 TCGCCTGCGATCGTGGTA 61.135 61.111 23.18 13.46 44.01 3.25
559 560 2.202690 CGCCTGCGATCGTGGTAA 60.203 61.111 23.18 4.41 42.83 2.85
560 561 1.807981 CGCCTGCGATCGTGGTAAA 60.808 57.895 23.18 2.94 42.83 2.01
561 562 1.151777 CGCCTGCGATCGTGGTAAAT 61.152 55.000 23.18 0.00 42.83 1.40
562 563 1.014352 GCCTGCGATCGTGGTAAATT 58.986 50.000 23.18 0.00 0.00 1.82
563 564 1.400494 GCCTGCGATCGTGGTAAATTT 59.600 47.619 23.18 0.00 0.00 1.82
564 565 2.538939 GCCTGCGATCGTGGTAAATTTC 60.539 50.000 23.18 7.67 0.00 2.17
565 566 2.031683 CCTGCGATCGTGGTAAATTTCC 59.968 50.000 17.81 0.00 0.00 3.13
566 567 2.936498 CTGCGATCGTGGTAAATTTCCT 59.064 45.455 17.81 0.00 0.00 3.36
567 568 4.116961 CTGCGATCGTGGTAAATTTCCTA 58.883 43.478 17.81 0.00 0.00 2.94
568 569 3.866910 TGCGATCGTGGTAAATTTCCTAC 59.133 43.478 17.81 0.00 0.00 3.18
569 570 4.117685 GCGATCGTGGTAAATTTCCTACT 58.882 43.478 17.81 0.00 0.00 2.57
570 571 4.208666 GCGATCGTGGTAAATTTCCTACTC 59.791 45.833 17.81 0.00 0.00 2.59
571 572 4.440103 CGATCGTGGTAAATTTCCTACTCG 59.560 45.833 7.03 0.00 0.00 4.18
572 573 4.789012 TCGTGGTAAATTTCCTACTCGT 57.211 40.909 0.00 0.00 0.00 4.18
573 574 4.487948 TCGTGGTAAATTTCCTACTCGTG 58.512 43.478 0.00 0.00 0.00 4.35
574 575 4.022068 TCGTGGTAAATTTCCTACTCGTGT 60.022 41.667 0.00 0.00 0.00 4.49
575 576 4.090930 CGTGGTAAATTTCCTACTCGTGTG 59.909 45.833 0.00 0.00 0.00 3.82
576 577 4.992951 GTGGTAAATTTCCTACTCGTGTGT 59.007 41.667 0.00 0.00 0.00 3.72
577 578 4.992319 TGGTAAATTTCCTACTCGTGTGTG 59.008 41.667 0.00 0.00 0.00 3.82
578 579 4.992951 GGTAAATTTCCTACTCGTGTGTGT 59.007 41.667 0.00 0.00 0.00 3.72
579 580 5.467735 GGTAAATTTCCTACTCGTGTGTGTT 59.532 40.000 0.00 0.00 0.00 3.32
580 581 5.668558 AAATTTCCTACTCGTGTGTGTTC 57.331 39.130 0.00 0.00 0.00 3.18
581 582 4.602340 ATTTCCTACTCGTGTGTGTTCT 57.398 40.909 0.00 0.00 0.00 3.01
582 583 3.364889 TTCCTACTCGTGTGTGTTCTG 57.635 47.619 0.00 0.00 0.00 3.02
583 584 2.578786 TCCTACTCGTGTGTGTTCTGA 58.421 47.619 0.00 0.00 0.00 3.27
584 585 3.154710 TCCTACTCGTGTGTGTTCTGAT 58.845 45.455 0.00 0.00 0.00 2.90
585 586 3.057526 TCCTACTCGTGTGTGTTCTGATG 60.058 47.826 0.00 0.00 0.00 3.07
586 587 2.890808 ACTCGTGTGTGTTCTGATGT 57.109 45.000 0.00 0.00 0.00 3.06
587 588 3.179443 ACTCGTGTGTGTTCTGATGTT 57.821 42.857 0.00 0.00 0.00 2.71
588 589 3.531538 ACTCGTGTGTGTTCTGATGTTT 58.468 40.909 0.00 0.00 0.00 2.83
589 590 3.309682 ACTCGTGTGTGTTCTGATGTTTG 59.690 43.478 0.00 0.00 0.00 2.93
590 591 3.266636 TCGTGTGTGTTCTGATGTTTGT 58.733 40.909 0.00 0.00 0.00 2.83
591 592 3.063316 TCGTGTGTGTTCTGATGTTTGTG 59.937 43.478 0.00 0.00 0.00 3.33
592 593 3.108144 GTGTGTGTTCTGATGTTTGTGC 58.892 45.455 0.00 0.00 0.00 4.57
593 594 2.098934 TGTGTGTTCTGATGTTTGTGCC 59.901 45.455 0.00 0.00 0.00 5.01
594 595 2.358898 GTGTGTTCTGATGTTTGTGCCT 59.641 45.455 0.00 0.00 0.00 4.75
595 596 2.358582 TGTGTTCTGATGTTTGTGCCTG 59.641 45.455 0.00 0.00 0.00 4.85
596 597 2.618241 GTGTTCTGATGTTTGTGCCTGA 59.382 45.455 0.00 0.00 0.00 3.86
597 598 3.066621 GTGTTCTGATGTTTGTGCCTGAA 59.933 43.478 0.00 0.00 0.00 3.02
598 599 3.698539 TGTTCTGATGTTTGTGCCTGAAA 59.301 39.130 0.00 0.00 0.00 2.69
599 600 4.202040 TGTTCTGATGTTTGTGCCTGAAAG 60.202 41.667 0.00 0.00 0.00 2.62
600 601 3.819368 TCTGATGTTTGTGCCTGAAAGA 58.181 40.909 0.00 0.00 34.07 2.52
601 602 3.817084 TCTGATGTTTGTGCCTGAAAGAG 59.183 43.478 0.00 0.00 34.07 2.85
602 603 3.817084 CTGATGTTTGTGCCTGAAAGAGA 59.183 43.478 0.00 0.00 34.07 3.10
603 604 3.817084 TGATGTTTGTGCCTGAAAGAGAG 59.183 43.478 0.00 0.00 34.07 3.20
604 605 3.558931 TGTTTGTGCCTGAAAGAGAGA 57.441 42.857 0.00 0.00 34.07 3.10
605 606 4.090761 TGTTTGTGCCTGAAAGAGAGAT 57.909 40.909 0.00 0.00 34.07 2.75
606 607 3.817084 TGTTTGTGCCTGAAAGAGAGATG 59.183 43.478 0.00 0.00 34.07 2.90
607 608 2.105006 TGTGCCTGAAAGAGAGATGC 57.895 50.000 0.00 0.00 34.07 3.91
608 609 1.005340 GTGCCTGAAAGAGAGATGCG 58.995 55.000 0.00 0.00 34.07 4.73
609 610 0.610174 TGCCTGAAAGAGAGATGCGT 59.390 50.000 0.00 0.00 34.07 5.24
610 611 1.002430 TGCCTGAAAGAGAGATGCGTT 59.998 47.619 0.00 0.00 34.07 4.84
611 612 1.663135 GCCTGAAAGAGAGATGCGTTC 59.337 52.381 0.00 0.00 34.07 3.95
612 613 2.676463 GCCTGAAAGAGAGATGCGTTCT 60.676 50.000 0.00 0.00 33.86 3.01
613 614 2.928757 CCTGAAAGAGAGATGCGTTCTG 59.071 50.000 0.00 0.00 31.51 3.02
614 615 2.341257 TGAAAGAGAGATGCGTTCTGC 58.659 47.619 0.00 0.00 46.70 4.26
615 616 1.663135 GAAAGAGAGATGCGTTCTGCC 59.337 52.381 0.00 0.00 45.60 4.85
616 617 0.901124 AAGAGAGATGCGTTCTGCCT 59.099 50.000 0.00 0.00 45.60 4.75
617 618 0.901124 AGAGAGATGCGTTCTGCCTT 59.099 50.000 0.00 0.00 45.60 4.35
618 619 1.005340 GAGAGATGCGTTCTGCCTTG 58.995 55.000 0.00 0.00 45.60 3.61
619 620 0.322975 AGAGATGCGTTCTGCCTTGT 59.677 50.000 0.00 0.00 45.60 3.16
620 621 0.445436 GAGATGCGTTCTGCCTTGTG 59.555 55.000 0.00 0.00 45.60 3.33
621 622 0.957395 AGATGCGTTCTGCCTTGTGG 60.957 55.000 0.00 0.00 45.60 4.17
622 623 0.955428 GATGCGTTCTGCCTTGTGGA 60.955 55.000 0.00 0.00 45.60 4.02
623 624 0.957395 ATGCGTTCTGCCTTGTGGAG 60.957 55.000 0.00 0.00 45.60 3.86
624 625 1.598130 GCGTTCTGCCTTGTGGAGT 60.598 57.895 0.00 0.00 37.76 3.85
625 626 1.166531 GCGTTCTGCCTTGTGGAGTT 61.167 55.000 0.00 0.00 37.76 3.01
626 627 1.876416 GCGTTCTGCCTTGTGGAGTTA 60.876 52.381 0.00 0.00 37.76 2.24
627 628 2.489971 CGTTCTGCCTTGTGGAGTTAA 58.510 47.619 0.00 0.00 34.57 2.01
628 629 3.074412 CGTTCTGCCTTGTGGAGTTAAT 58.926 45.455 0.00 0.00 34.57 1.40
629 630 3.502211 CGTTCTGCCTTGTGGAGTTAATT 59.498 43.478 0.00 0.00 34.57 1.40
630 631 4.023193 CGTTCTGCCTTGTGGAGTTAATTT 60.023 41.667 0.00 0.00 34.57 1.82
631 632 5.180492 CGTTCTGCCTTGTGGAGTTAATTTA 59.820 40.000 0.00 0.00 34.57 1.40
632 633 6.379386 GTTCTGCCTTGTGGAGTTAATTTAC 58.621 40.000 0.00 0.00 34.57 2.01
633 634 4.693566 TCTGCCTTGTGGAGTTAATTTACG 59.306 41.667 0.00 0.00 34.57 3.18
634 635 3.189702 TGCCTTGTGGAGTTAATTTACGC 59.810 43.478 0.00 0.00 34.57 4.42
635 636 3.189702 GCCTTGTGGAGTTAATTTACGCA 59.810 43.478 0.92 0.00 34.57 5.24
636 637 4.719040 CCTTGTGGAGTTAATTTACGCAC 58.281 43.478 0.92 0.00 34.57 5.34
637 638 4.391358 CTTGTGGAGTTAATTTACGCACG 58.609 43.478 0.92 0.00 0.00 5.34
638 639 3.391965 TGTGGAGTTAATTTACGCACGT 58.608 40.909 0.00 0.00 0.00 4.49
639 640 3.808726 TGTGGAGTTAATTTACGCACGTT 59.191 39.130 0.00 0.00 0.00 3.99
640 641 4.987285 TGTGGAGTTAATTTACGCACGTTA 59.013 37.500 0.00 0.00 0.00 3.18
641 642 5.107530 TGTGGAGTTAATTTACGCACGTTAC 60.108 40.000 0.00 0.00 0.00 2.50
642 643 4.987285 TGGAGTTAATTTACGCACGTTACA 59.013 37.500 0.00 0.00 0.00 2.41
643 644 5.638657 TGGAGTTAATTTACGCACGTTACAT 59.361 36.000 0.00 0.00 0.00 2.29
644 645 5.955496 GGAGTTAATTTACGCACGTTACATG 59.045 40.000 0.00 0.00 0.00 3.21
645 646 6.401367 GGAGTTAATTTACGCACGTTACATGT 60.401 38.462 2.69 2.69 0.00 3.21
646 647 7.201427 GGAGTTAATTTACGCACGTTACATGTA 60.201 37.037 0.08 0.08 0.00 2.29
647 648 7.669098 AGTTAATTTACGCACGTTACATGTAG 58.331 34.615 5.56 0.00 0.00 2.74
648 649 7.329226 AGTTAATTTACGCACGTTACATGTAGT 59.671 33.333 5.56 2.26 0.00 2.73
649 650 8.582930 GTTAATTTACGCACGTTACATGTAGTA 58.417 33.333 5.56 1.29 0.00 1.82
650 651 5.990745 TTTACGCACGTTACATGTAGTAC 57.009 39.130 5.56 1.68 30.91 2.73
651 652 3.837213 ACGCACGTTACATGTAGTACT 57.163 42.857 5.56 0.00 30.91 2.73
652 653 4.944962 ACGCACGTTACATGTAGTACTA 57.055 40.909 5.56 0.00 30.91 1.82
653 654 4.651994 ACGCACGTTACATGTAGTACTAC 58.348 43.478 23.58 23.58 36.63 2.73
654 655 4.393062 ACGCACGTTACATGTAGTACTACT 59.607 41.667 28.56 14.73 37.00 2.57
655 656 5.106555 ACGCACGTTACATGTAGTACTACTT 60.107 40.000 28.56 21.53 37.00 2.24
656 657 5.226565 CGCACGTTACATGTAGTACTACTTG 59.773 44.000 32.01 32.01 43.03 3.16
658 659 7.243487 GCACGTTACATGTAGTACTACTTGTA 58.757 38.462 35.25 35.25 46.12 2.41
659 660 7.912250 GCACGTTACATGTAGTACTACTTGTAT 59.088 37.037 37.08 28.10 46.52 2.29
660 661 9.778993 CACGTTACATGTAGTACTACTTGTATT 57.221 33.333 37.08 28.11 46.52 1.89
667 668 9.525409 CATGTAGTACTACTTGTATTTGTACCC 57.475 37.037 28.35 5.30 36.82 3.69
668 669 7.761409 TGTAGTACTACTTGTATTTGTACCCG 58.239 38.462 28.56 0.00 37.00 5.28
669 670 7.609918 TGTAGTACTACTTGTATTTGTACCCGA 59.390 37.037 28.56 4.48 37.00 5.14
670 671 7.466746 AGTACTACTTGTATTTGTACCCGAA 57.533 36.000 0.00 0.00 35.45 4.30
671 672 7.542025 AGTACTACTTGTATTTGTACCCGAAG 58.458 38.462 0.00 0.00 35.45 3.79
672 673 6.350629 ACTACTTGTATTTGTACCCGAAGT 57.649 37.500 0.00 0.00 0.00 3.01
673 674 7.466746 ACTACTTGTATTTGTACCCGAAGTA 57.533 36.000 0.00 0.00 0.00 2.24
674 675 7.895759 ACTACTTGTATTTGTACCCGAAGTAA 58.104 34.615 0.00 0.00 31.05 2.24
675 676 8.534496 ACTACTTGTATTTGTACCCGAAGTAAT 58.466 33.333 0.00 0.00 31.05 1.89
676 677 7.605410 ACTTGTATTTGTACCCGAAGTAATG 57.395 36.000 0.00 0.00 31.05 1.90
677 678 6.596497 ACTTGTATTTGTACCCGAAGTAATGG 59.404 38.462 0.00 0.00 31.05 3.16
678 679 6.052405 TGTATTTGTACCCGAAGTAATGGT 57.948 37.500 0.00 0.00 36.15 3.55
679 680 7.180322 TGTATTTGTACCCGAAGTAATGGTA 57.820 36.000 0.00 0.00 33.55 3.25
680 681 7.794041 TGTATTTGTACCCGAAGTAATGGTAT 58.206 34.615 0.00 0.00 37.01 2.73
681 682 7.711772 TGTATTTGTACCCGAAGTAATGGTATG 59.288 37.037 0.00 0.00 37.01 2.39
682 683 5.680594 TTGTACCCGAAGTAATGGTATGT 57.319 39.130 0.00 0.00 37.01 2.29
683 684 6.788598 TTGTACCCGAAGTAATGGTATGTA 57.211 37.500 0.00 0.00 37.01 2.29
684 685 6.788598 TGTACCCGAAGTAATGGTATGTAA 57.211 37.500 0.00 0.00 37.01 2.41
685 686 7.364149 TGTACCCGAAGTAATGGTATGTAAT 57.636 36.000 0.00 0.00 37.01 1.89
686 687 8.476064 TGTACCCGAAGTAATGGTATGTAATA 57.524 34.615 0.00 0.00 37.01 0.98
687 688 8.922237 TGTACCCGAAGTAATGGTATGTAATAA 58.078 33.333 0.00 0.00 37.01 1.40
688 689 9.415544 GTACCCGAAGTAATGGTATGTAATAAG 57.584 37.037 0.00 0.00 37.01 1.73
689 690 8.253867 ACCCGAAGTAATGGTATGTAATAAGA 57.746 34.615 0.00 0.00 0.00 2.10
690 691 8.365647 ACCCGAAGTAATGGTATGTAATAAGAG 58.634 37.037 0.00 0.00 0.00 2.85
691 692 8.582437 CCCGAAGTAATGGTATGTAATAAGAGA 58.418 37.037 0.00 0.00 0.00 3.10
692 693 9.976511 CCGAAGTAATGGTATGTAATAAGAGAA 57.023 33.333 0.00 0.00 0.00 2.87
712 713 9.903682 AAGAGAAATAATGTGTGATTTGAAGTG 57.096 29.630 0.00 0.00 0.00 3.16
713 714 8.025445 AGAGAAATAATGTGTGATTTGAAGTGC 58.975 33.333 0.00 0.00 0.00 4.40
714 715 7.660112 AGAAATAATGTGTGATTTGAAGTGCA 58.340 30.769 0.00 0.00 0.00 4.57
715 716 8.143193 AGAAATAATGTGTGATTTGAAGTGCAA 58.857 29.630 0.00 0.00 33.88 4.08
716 717 8.836268 AAATAATGTGTGATTTGAAGTGCAAT 57.164 26.923 0.00 0.00 36.15 3.56
717 718 7.821595 ATAATGTGTGATTTGAAGTGCAATG 57.178 32.000 0.00 0.00 36.15 2.82
718 719 3.382855 TGTGTGATTTGAAGTGCAATGC 58.617 40.909 0.00 0.00 36.15 3.56
719 720 3.068448 TGTGTGATTTGAAGTGCAATGCT 59.932 39.130 6.82 0.00 36.15 3.79
720 721 4.277921 TGTGTGATTTGAAGTGCAATGCTA 59.722 37.500 6.82 0.00 36.15 3.49
721 722 5.221204 TGTGTGATTTGAAGTGCAATGCTAA 60.221 36.000 6.82 0.00 36.15 3.09
722 723 5.691305 GTGTGATTTGAAGTGCAATGCTAAA 59.309 36.000 6.82 1.20 36.15 1.85
723 724 6.366877 GTGTGATTTGAAGTGCAATGCTAAAT 59.633 34.615 6.82 5.85 36.15 1.40
724 725 7.541783 GTGTGATTTGAAGTGCAATGCTAAATA 59.458 33.333 6.82 0.00 36.15 1.40
725 726 7.541783 TGTGATTTGAAGTGCAATGCTAAATAC 59.458 33.333 6.82 0.00 36.15 1.89
726 727 7.756722 GTGATTTGAAGTGCAATGCTAAATACT 59.243 33.333 6.82 0.00 36.15 2.12
727 728 7.970061 TGATTTGAAGTGCAATGCTAAATACTC 59.030 33.333 6.82 0.00 36.15 2.59
728 729 6.816134 TTGAAGTGCAATGCTAAATACTCA 57.184 33.333 6.82 0.00 0.00 3.41
729 730 7.395190 TTGAAGTGCAATGCTAAATACTCAT 57.605 32.000 6.82 0.00 0.00 2.90
730 731 7.019774 TGAAGTGCAATGCTAAATACTCATC 57.980 36.000 6.82 0.00 0.00 2.92
731 732 6.038603 TGAAGTGCAATGCTAAATACTCATCC 59.961 38.462 6.82 0.00 0.00 3.51
732 733 4.512944 AGTGCAATGCTAAATACTCATCCG 59.487 41.667 6.82 0.00 0.00 4.18
733 734 4.273480 GTGCAATGCTAAATACTCATCCGT 59.727 41.667 6.82 0.00 0.00 4.69
734 735 4.511454 TGCAATGCTAAATACTCATCCGTC 59.489 41.667 6.82 0.00 0.00 4.79
735 736 4.752101 GCAATGCTAAATACTCATCCGTCT 59.248 41.667 0.00 0.00 0.00 4.18
736 737 5.107298 GCAATGCTAAATACTCATCCGTCTC 60.107 44.000 0.00 0.00 0.00 3.36
737 738 5.791336 ATGCTAAATACTCATCCGTCTCA 57.209 39.130 0.00 0.00 0.00 3.27
738 739 5.592104 TGCTAAATACTCATCCGTCTCAA 57.408 39.130 0.00 0.00 0.00 3.02
739 740 5.972935 TGCTAAATACTCATCCGTCTCAAA 58.027 37.500 0.00 0.00 0.00 2.69
740 741 6.403049 TGCTAAATACTCATCCGTCTCAAAA 58.597 36.000 0.00 0.00 0.00 2.44
741 742 7.047891 TGCTAAATACTCATCCGTCTCAAAAT 58.952 34.615 0.00 0.00 0.00 1.82
742 743 8.201464 TGCTAAATACTCATCCGTCTCAAAATA 58.799 33.333 0.00 0.00 0.00 1.40
743 744 9.042008 GCTAAATACTCATCCGTCTCAAAATAA 57.958 33.333 0.00 0.00 0.00 1.40
746 747 8.425577 AATACTCATCCGTCTCAAAATAAGTG 57.574 34.615 0.00 0.00 0.00 3.16
747 748 5.794894 ACTCATCCGTCTCAAAATAAGTGT 58.205 37.500 0.00 0.00 0.00 3.55
748 749 5.869888 ACTCATCCGTCTCAAAATAAGTGTC 59.130 40.000 0.00 0.00 0.00 3.67
749 750 6.037786 TCATCCGTCTCAAAATAAGTGTCT 57.962 37.500 0.00 0.00 0.00 3.41
750 751 6.464222 TCATCCGTCTCAAAATAAGTGTCTT 58.536 36.000 0.00 0.00 0.00 3.01
751 752 7.608153 TCATCCGTCTCAAAATAAGTGTCTTA 58.392 34.615 0.00 0.00 0.00 2.10
752 753 8.092068 TCATCCGTCTCAAAATAAGTGTCTTAA 58.908 33.333 0.00 0.00 0.00 1.85
753 754 7.884816 TCCGTCTCAAAATAAGTGTCTTAAG 57.115 36.000 0.00 0.00 0.00 1.85
754 755 6.367969 TCCGTCTCAAAATAAGTGTCTTAAGC 59.632 38.462 0.00 0.00 0.00 3.09
755 756 6.369065 CCGTCTCAAAATAAGTGTCTTAAGCT 59.631 38.462 0.00 0.00 0.00 3.74
756 757 7.095187 CCGTCTCAAAATAAGTGTCTTAAGCTT 60.095 37.037 3.48 3.48 0.00 3.74
757 758 8.922676 CGTCTCAAAATAAGTGTCTTAAGCTTA 58.077 33.333 0.86 0.86 0.00 3.09
797 798 7.948034 AGAGCTAGTATAAAGTTGAGACACT 57.052 36.000 0.00 0.00 0.00 3.55
798 799 8.356000 AGAGCTAGTATAAAGTTGAGACACTT 57.644 34.615 0.00 0.00 38.74 3.16
799 800 9.463902 AGAGCTAGTATAAAGTTGAGACACTTA 57.536 33.333 0.00 0.00 35.87 2.24
809 810 7.653767 AAGTTGAGACACTTATTTTAGGACG 57.346 36.000 0.00 0.00 35.10 4.79
810 811 6.164176 AGTTGAGACACTTATTTTAGGACGG 58.836 40.000 0.00 0.00 0.00 4.79
811 812 5.080969 TGAGACACTTATTTTAGGACGGG 57.919 43.478 0.00 0.00 0.00 5.28
812 813 4.081309 TGAGACACTTATTTTAGGACGGGG 60.081 45.833 0.00 0.00 0.00 5.73
813 814 3.842436 AGACACTTATTTTAGGACGGGGT 59.158 43.478 0.00 0.00 0.00 4.95
814 815 3.937079 GACACTTATTTTAGGACGGGGTG 59.063 47.826 0.00 0.00 0.00 4.61
815 816 3.583966 ACACTTATTTTAGGACGGGGTGA 59.416 43.478 0.00 0.00 0.00 4.02
816 817 4.189231 CACTTATTTTAGGACGGGGTGAG 58.811 47.826 0.00 0.00 0.00 3.51
817 818 3.842436 ACTTATTTTAGGACGGGGTGAGT 59.158 43.478 0.00 0.00 0.00 3.41
818 819 5.025453 ACTTATTTTAGGACGGGGTGAGTA 58.975 41.667 0.00 0.00 0.00 2.59
819 820 5.484998 ACTTATTTTAGGACGGGGTGAGTAA 59.515 40.000 0.00 0.00 0.00 2.24
820 821 6.157471 ACTTATTTTAGGACGGGGTGAGTAAT 59.843 38.462 0.00 0.00 0.00 1.89
821 822 7.345392 ACTTATTTTAGGACGGGGTGAGTAATA 59.655 37.037 0.00 0.00 0.00 0.98
822 823 6.564557 ATTTTAGGACGGGGTGAGTAATAA 57.435 37.500 0.00 0.00 0.00 1.40
823 824 5.603170 TTTAGGACGGGGTGAGTAATAAG 57.397 43.478 0.00 0.00 0.00 1.73
824 825 3.393426 AGGACGGGGTGAGTAATAAGA 57.607 47.619 0.00 0.00 0.00 2.10
825 826 3.716431 AGGACGGGGTGAGTAATAAGAA 58.284 45.455 0.00 0.00 0.00 2.52
826 827 4.098894 AGGACGGGGTGAGTAATAAGAAA 58.901 43.478 0.00 0.00 0.00 2.52
827 828 4.533311 AGGACGGGGTGAGTAATAAGAAAA 59.467 41.667 0.00 0.00 0.00 2.29
828 829 5.013391 AGGACGGGGTGAGTAATAAGAAAAA 59.987 40.000 0.00 0.00 0.00 1.94
829 830 5.122869 GGACGGGGTGAGTAATAAGAAAAAC 59.877 44.000 0.00 0.00 0.00 2.43
830 831 5.872963 ACGGGGTGAGTAATAAGAAAAACT 58.127 37.500 0.00 0.00 0.00 2.66
831 832 5.704053 ACGGGGTGAGTAATAAGAAAAACTG 59.296 40.000 0.00 0.00 0.00 3.16
832 833 5.935789 CGGGGTGAGTAATAAGAAAAACTGA 59.064 40.000 0.00 0.00 0.00 3.41
833 834 6.428771 CGGGGTGAGTAATAAGAAAAACTGAA 59.571 38.462 0.00 0.00 0.00 3.02
834 835 7.040961 CGGGGTGAGTAATAAGAAAAACTGAAA 60.041 37.037 0.00 0.00 0.00 2.69
835 836 8.297426 GGGGTGAGTAATAAGAAAAACTGAAAG 58.703 37.037 0.00 0.00 42.29 2.62
836 837 9.063615 GGGTGAGTAATAAGAAAAACTGAAAGA 57.936 33.333 0.00 0.00 37.43 2.52
838 839 9.600646 GTGAGTAATAAGAAAAACTGAAAGAGC 57.399 33.333 0.00 0.00 37.43 4.09
839 840 9.337396 TGAGTAATAAGAAAAACTGAAAGAGCA 57.663 29.630 0.00 0.00 37.43 4.26
840 841 9.818796 GAGTAATAAGAAAAACTGAAAGAGCAG 57.181 33.333 0.00 0.00 41.63 4.24
848 849 2.354259 ACTGAAAGAGCAGTGCTATGC 58.646 47.619 19.77 11.59 46.72 3.14
849 850 2.289882 ACTGAAAGAGCAGTGCTATGCA 60.290 45.455 19.77 15.59 46.72 3.96
850 851 4.173729 ACTGAAAGAGCAGTGCTATGCAG 61.174 47.826 27.72 27.72 46.72 4.41
860 861 3.833706 GCTATGCAGCCAACGATTC 57.166 52.632 0.00 0.00 42.37 2.52
861 862 1.303309 GCTATGCAGCCAACGATTCT 58.697 50.000 0.00 0.00 42.37 2.40
862 863 1.672881 GCTATGCAGCCAACGATTCTT 59.327 47.619 0.00 0.00 42.37 2.52
863 864 2.098117 GCTATGCAGCCAACGATTCTTT 59.902 45.455 0.00 0.00 42.37 2.52
864 865 2.927553 ATGCAGCCAACGATTCTTTC 57.072 45.000 0.00 0.00 0.00 2.62
865 866 1.603456 TGCAGCCAACGATTCTTTCA 58.397 45.000 0.00 0.00 0.00 2.69
866 867 1.536766 TGCAGCCAACGATTCTTTCAG 59.463 47.619 0.00 0.00 0.00 3.02
867 868 1.537202 GCAGCCAACGATTCTTTCAGT 59.463 47.619 0.00 0.00 0.00 3.41
868 869 2.666619 GCAGCCAACGATTCTTTCAGTG 60.667 50.000 0.00 0.00 0.00 3.66
869 870 2.095567 CAGCCAACGATTCTTTCAGTGG 60.096 50.000 0.00 0.00 33.10 4.00
870 871 1.401539 GCCAACGATTCTTTCAGTGGC 60.402 52.381 0.00 0.00 43.12 5.01
871 872 1.135972 CCAACGATTCTTTCAGTGGCG 60.136 52.381 0.00 0.00 0.00 5.69
872 873 1.135972 CAACGATTCTTTCAGTGGCGG 60.136 52.381 0.00 0.00 0.00 6.13
873 874 0.320374 ACGATTCTTTCAGTGGCGGA 59.680 50.000 0.00 0.00 0.00 5.54
874 875 1.002366 CGATTCTTTCAGTGGCGGAG 58.998 55.000 0.00 0.00 0.00 4.63
875 876 1.373570 GATTCTTTCAGTGGCGGAGG 58.626 55.000 0.00 0.00 0.00 4.30
876 877 0.693049 ATTCTTTCAGTGGCGGAGGT 59.307 50.000 0.00 0.00 0.00 3.85
877 878 1.344065 TTCTTTCAGTGGCGGAGGTA 58.656 50.000 0.00 0.00 0.00 3.08
878 879 0.895530 TCTTTCAGTGGCGGAGGTAG 59.104 55.000 0.00 0.00 0.00 3.18
879 880 0.895530 CTTTCAGTGGCGGAGGTAGA 59.104 55.000 0.00 0.00 0.00 2.59
880 881 1.482593 CTTTCAGTGGCGGAGGTAGAT 59.517 52.381 0.00 0.00 0.00 1.98
881 882 0.824109 TTCAGTGGCGGAGGTAGATG 59.176 55.000 0.00 0.00 0.00 2.90
882 883 1.043116 TCAGTGGCGGAGGTAGATGG 61.043 60.000 0.00 0.00 0.00 3.51
883 884 1.001760 AGTGGCGGAGGTAGATGGT 59.998 57.895 0.00 0.00 0.00 3.55
884 885 1.144057 GTGGCGGAGGTAGATGGTG 59.856 63.158 0.00 0.00 0.00 4.17
885 886 2.063979 TGGCGGAGGTAGATGGTGG 61.064 63.158 0.00 0.00 0.00 4.61
886 887 2.109181 GCGGAGGTAGATGGTGGC 59.891 66.667 0.00 0.00 0.00 5.01
887 888 2.822399 CGGAGGTAGATGGTGGCC 59.178 66.667 0.00 0.00 0.00 5.36
888 889 2.063979 CGGAGGTAGATGGTGGCCA 61.064 63.158 0.00 0.00 38.19 5.36
889 890 1.832912 GGAGGTAGATGGTGGCCAG 59.167 63.158 5.11 0.00 36.75 4.85
890 891 1.700042 GGAGGTAGATGGTGGCCAGG 61.700 65.000 5.11 0.00 36.75 4.45
891 892 1.694169 AGGTAGATGGTGGCCAGGG 60.694 63.158 5.11 0.00 36.75 4.45
892 893 2.001269 GGTAGATGGTGGCCAGGGT 61.001 63.158 5.11 0.00 36.75 4.34
893 894 1.224592 GTAGATGGTGGCCAGGGTG 59.775 63.158 5.11 0.00 36.75 4.61
894 895 2.000701 TAGATGGTGGCCAGGGTGG 61.001 63.158 5.11 0.00 41.55 4.61
895 896 4.447342 GATGGTGGCCAGGGTGGG 62.447 72.222 5.11 0.00 38.19 4.61
914 915 3.402681 CACGGCCCACCCTGAGAT 61.403 66.667 0.00 0.00 0.00 2.75
915 916 2.610859 ACGGCCCACCCTGAGATT 60.611 61.111 0.00 0.00 0.00 2.40
916 917 2.231380 ACGGCCCACCCTGAGATTT 61.231 57.895 0.00 0.00 0.00 2.17
917 918 1.750399 CGGCCCACCCTGAGATTTG 60.750 63.158 0.00 0.00 0.00 2.32
918 919 1.691219 GGCCCACCCTGAGATTTGA 59.309 57.895 0.00 0.00 0.00 2.69
919 920 0.039618 GGCCCACCCTGAGATTTGAA 59.960 55.000 0.00 0.00 0.00 2.69
920 921 1.549950 GGCCCACCCTGAGATTTGAAA 60.550 52.381 0.00 0.00 0.00 2.69
921 922 2.247358 GCCCACCCTGAGATTTGAAAA 58.753 47.619 0.00 0.00 0.00 2.29
922 923 2.833943 GCCCACCCTGAGATTTGAAAAT 59.166 45.455 0.00 0.00 0.00 1.82
923 924 4.023291 GCCCACCCTGAGATTTGAAAATA 58.977 43.478 0.00 0.00 0.00 1.40
924 925 4.466015 GCCCACCCTGAGATTTGAAAATAA 59.534 41.667 0.00 0.00 0.00 1.40
925 926 5.624509 GCCCACCCTGAGATTTGAAAATAAC 60.625 44.000 0.00 0.00 0.00 1.89
926 927 5.716703 CCCACCCTGAGATTTGAAAATAACT 59.283 40.000 0.00 0.00 0.00 2.24
927 928 6.211384 CCCACCCTGAGATTTGAAAATAACTT 59.789 38.462 0.00 0.00 0.00 2.66
928 929 7.256296 CCCACCCTGAGATTTGAAAATAACTTT 60.256 37.037 0.00 0.00 0.00 2.66
929 930 8.150296 CCACCCTGAGATTTGAAAATAACTTTT 58.850 33.333 0.00 0.00 37.28 2.27
947 948 9.794719 ATAACTTTTATACCATAGGAGAAAGGC 57.205 33.333 0.00 0.00 0.00 4.35
948 949 7.453141 ACTTTTATACCATAGGAGAAAGGCT 57.547 36.000 0.00 0.00 0.00 4.58
949 950 8.562949 ACTTTTATACCATAGGAGAAAGGCTA 57.437 34.615 0.00 0.00 0.00 3.93
950 951 8.999895 ACTTTTATACCATAGGAGAAAGGCTAA 58.000 33.333 0.00 0.00 0.00 3.09
951 952 9.847224 CTTTTATACCATAGGAGAAAGGCTAAA 57.153 33.333 0.00 0.00 0.00 1.85
989 990 5.862924 AATGTATATGTATCGTTGCTGGC 57.137 39.130 0.00 0.00 0.00 4.85
990 991 3.659786 TGTATATGTATCGTTGCTGGCC 58.340 45.455 0.00 0.00 0.00 5.36
991 992 2.185004 ATATGTATCGTTGCTGGCCC 57.815 50.000 0.00 0.00 0.00 5.80
992 993 0.833949 TATGTATCGTTGCTGGCCCA 59.166 50.000 0.00 0.00 0.00 5.36
993 994 0.748005 ATGTATCGTTGCTGGCCCAC 60.748 55.000 0.00 0.00 0.00 4.61
994 995 2.112815 GTATCGTTGCTGGCCCACC 61.113 63.158 0.00 0.00 0.00 4.61
995 996 3.338275 TATCGTTGCTGGCCCACCC 62.338 63.158 0.00 0.00 33.59 4.61
1006 1007 2.681064 CCCACCCTGGCACAATGG 60.681 66.667 0.00 0.17 38.70 3.16
1008 1009 3.384532 CACCCTGGCACAATGGGC 61.385 66.667 9.34 0.00 46.64 5.36
1009 1010 3.593680 ACCCTGGCACAATGGGCT 61.594 61.111 7.65 0.00 46.64 5.19
1010 1011 2.237965 ACCCTGGCACAATGGGCTA 61.238 57.895 7.65 0.00 46.64 3.93
1011 1012 1.454479 CCCTGGCACAATGGGCTAG 60.454 63.158 14.24 14.24 37.01 3.42
1012 1013 4.247781 CTGGCACAATGGGCTAGG 57.752 61.111 13.36 0.00 38.70 3.02
1013 1014 1.304282 CTGGCACAATGGGCTAGGT 59.696 57.895 13.36 0.00 38.70 3.08
1014 1015 0.749454 CTGGCACAATGGGCTAGGTC 60.749 60.000 13.36 0.00 38.70 3.85
1015 1016 1.453928 GGCACAATGGGCTAGGTCC 60.454 63.158 7.65 0.00 0.00 4.46
1016 1017 1.819632 GCACAATGGGCTAGGTCCG 60.820 63.158 0.00 0.00 0.00 4.79
1017 1018 1.819632 CACAATGGGCTAGGTCCGC 60.820 63.158 0.00 0.00 0.00 5.54
1018 1019 2.203209 CAATGGGCTAGGTCCGCC 60.203 66.667 0.00 0.00 46.83 6.13
1023 1024 4.840005 GGCTAGGTCCGCCACTGC 62.840 72.222 3.05 0.00 46.77 4.40
1024 1025 3.775654 GCTAGGTCCGCCACTGCT 61.776 66.667 0.00 0.00 37.19 4.24
1025 1026 2.423898 GCTAGGTCCGCCACTGCTA 61.424 63.158 0.00 0.00 37.19 3.49
1026 1027 1.736586 CTAGGTCCGCCACTGCTAG 59.263 63.158 0.00 0.00 37.19 3.42
1027 1028 2.356818 CTAGGTCCGCCACTGCTAGC 62.357 65.000 8.10 8.10 37.19 3.42
1028 1029 2.856039 TAGGTCCGCCACTGCTAGCT 62.856 60.000 17.23 0.00 37.19 3.32
1029 1030 2.423898 GGTCCGCCACTGCTAGCTA 61.424 63.158 17.23 1.31 34.43 3.32
1030 1031 1.515954 GTCCGCCACTGCTAGCTAA 59.484 57.895 17.23 0.00 34.43 3.09
1031 1032 0.105039 GTCCGCCACTGCTAGCTAAT 59.895 55.000 17.23 0.00 34.43 1.73
1032 1033 0.389391 TCCGCCACTGCTAGCTAATC 59.611 55.000 17.23 0.63 34.43 1.75
1033 1034 0.104855 CCGCCACTGCTAGCTAATCA 59.895 55.000 17.23 0.00 34.43 2.57
1034 1035 1.212616 CGCCACTGCTAGCTAATCAC 58.787 55.000 17.23 0.32 34.43 3.06
1035 1036 1.471501 CGCCACTGCTAGCTAATCACA 60.472 52.381 17.23 0.00 34.43 3.58
1036 1037 2.632377 GCCACTGCTAGCTAATCACAA 58.368 47.619 17.23 0.00 33.53 3.33
1037 1038 3.209410 GCCACTGCTAGCTAATCACAAT 58.791 45.455 17.23 0.00 33.53 2.71
1038 1039 3.629398 GCCACTGCTAGCTAATCACAATT 59.371 43.478 17.23 0.00 33.53 2.32
1039 1040 4.816385 GCCACTGCTAGCTAATCACAATTA 59.184 41.667 17.23 0.00 33.53 1.40
1040 1041 5.049818 GCCACTGCTAGCTAATCACAATTAG 60.050 44.000 17.23 2.46 39.93 1.73
1041 1042 6.283694 CCACTGCTAGCTAATCACAATTAGA 58.716 40.000 17.23 0.00 44.87 2.10
1042 1043 6.933521 CCACTGCTAGCTAATCACAATTAGAT 59.066 38.462 17.23 5.49 44.87 1.98
1043 1044 7.443575 CCACTGCTAGCTAATCACAATTAGATT 59.556 37.037 17.23 9.46 44.87 2.40
1073 1074 2.015736 ATGCATCGGAAGTCACTGTC 57.984 50.000 0.00 0.00 0.00 3.51
1189 1190 1.202110 CGTATTGAGCTCGTACACCGT 60.202 52.381 21.73 2.43 37.94 4.83
1361 1414 2.040043 CCCTCCCCATCTCCAGCT 60.040 66.667 0.00 0.00 0.00 4.24
1362 1415 1.237163 CCCTCCCCATCTCCAGCTA 59.763 63.158 0.00 0.00 0.00 3.32
1534 1627 1.302511 GACACGCATGAGGGTTGGT 60.303 57.895 5.60 0.00 39.11 3.67
1747 1876 1.459455 GCGCTGCAGAGGATAGGAGA 61.459 60.000 20.43 0.00 0.00 3.71
2337 2805 2.221981 GCTGAAAGGTGAGAAGAACACG 59.778 50.000 0.00 0.00 38.90 4.49
2484 2992 8.274322 TCAGTATGGATCAAATGTTACATCCTT 58.726 33.333 0.00 0.00 36.51 3.36
2502 3010 5.105567 TCCTTAGTGACCAAAAGACAACA 57.894 39.130 0.00 0.00 0.00 3.33
2503 3011 5.690865 TCCTTAGTGACCAAAAGACAACAT 58.309 37.500 0.00 0.00 0.00 2.71
2960 3553 5.643777 TCTTGTGCTGCCTTCTTATTTAGTC 59.356 40.000 0.00 0.00 0.00 2.59
2975 3568 4.442375 TTTAGTCCAGCTTCTTCTCTCG 57.558 45.455 0.00 0.00 0.00 4.04
3101 3694 2.899900 TGCTGTTCTTCTCTCCTTGCTA 59.100 45.455 0.00 0.00 0.00 3.49
3102 3695 3.517100 TGCTGTTCTTCTCTCCTTGCTAT 59.483 43.478 0.00 0.00 0.00 2.97
3228 3821 2.161855 TGGCTGTGATTGGTTCATCAC 58.838 47.619 6.84 6.84 45.35 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
411 412 3.207669 GGAGAAGCTGCATGGCGG 61.208 66.667 1.02 0.00 38.08 6.13
468 469 3.058160 CAGCTCTTTGGTGGCCCG 61.058 66.667 0.00 0.00 40.23 6.13
491 492 2.035704 AGCACGCACATTTTGGAATCAA 59.964 40.909 0.00 0.00 0.00 2.57
497 498 1.068402 TGATCAGCACGCACATTTTGG 60.068 47.619 0.00 0.00 0.00 3.28
499 500 2.751259 AGATGATCAGCACGCACATTTT 59.249 40.909 14.38 0.00 0.00 1.82
500 501 2.096980 CAGATGATCAGCACGCACATTT 59.903 45.455 14.38 0.00 0.00 2.32
501 502 1.669265 CAGATGATCAGCACGCACATT 59.331 47.619 14.38 0.00 0.00 2.71
502 503 1.296727 CAGATGATCAGCACGCACAT 58.703 50.000 14.38 0.00 0.00 3.21
503 504 0.037046 ACAGATGATCAGCACGCACA 60.037 50.000 14.38 0.00 0.00 4.57
504 505 0.649475 GACAGATGATCAGCACGCAC 59.351 55.000 14.38 0.00 0.00 5.34
505 506 0.803380 CGACAGATGATCAGCACGCA 60.803 55.000 14.38 0.00 0.00 5.24
506 507 0.803768 ACGACAGATGATCAGCACGC 60.804 55.000 14.38 0.38 0.00 5.34
507 508 0.919300 CACGACAGATGATCAGCACG 59.081 55.000 14.38 16.73 0.00 5.34
508 509 2.284263 TCACGACAGATGATCAGCAC 57.716 50.000 14.38 3.42 0.00 4.40
509 510 2.232208 AGTTCACGACAGATGATCAGCA 59.768 45.455 14.38 0.00 0.00 4.41
510 511 2.857152 GAGTTCACGACAGATGATCAGC 59.143 50.000 1.78 1.78 0.00 4.26
511 512 3.104470 CGAGTTCACGACAGATGATCAG 58.896 50.000 0.09 0.00 35.09 2.90
512 513 2.488153 ACGAGTTCACGACAGATGATCA 59.512 45.455 0.00 0.00 37.03 2.92
513 514 3.102276 GACGAGTTCACGACAGATGATC 58.898 50.000 0.00 0.00 37.03 2.92
514 515 2.488153 TGACGAGTTCACGACAGATGAT 59.512 45.455 0.00 0.00 33.89 2.45
515 516 1.877443 TGACGAGTTCACGACAGATGA 59.123 47.619 0.00 0.00 33.89 2.92
516 517 2.331809 TGACGAGTTCACGACAGATG 57.668 50.000 0.00 0.00 33.89 2.90
517 518 3.191581 AGAATGACGAGTTCACGACAGAT 59.808 43.478 0.00 0.00 40.39 2.90
518 519 2.552743 AGAATGACGAGTTCACGACAGA 59.447 45.455 0.00 0.00 40.39 3.41
519 520 2.658802 CAGAATGACGAGTTCACGACAG 59.341 50.000 0.00 0.00 40.39 3.51
520 521 2.034179 ACAGAATGACGAGTTCACGACA 59.966 45.455 0.00 0.00 39.69 4.35
521 522 2.657372 GACAGAATGACGAGTTCACGAC 59.343 50.000 0.00 0.00 39.69 4.34
522 523 2.929960 GACAGAATGACGAGTTCACGA 58.070 47.619 0.00 0.00 39.69 4.35
532 533 1.446099 TCGCAGGCGACAGAATGAC 60.446 57.895 12.94 0.00 44.01 3.06
533 534 2.969827 TCGCAGGCGACAGAATGA 59.030 55.556 12.94 0.00 44.01 2.57
542 543 1.151777 ATTTACCACGATCGCAGGCG 61.152 55.000 22.77 7.46 41.35 5.52
543 544 1.014352 AATTTACCACGATCGCAGGC 58.986 50.000 22.77 0.00 0.00 4.85
544 545 2.031683 GGAAATTTACCACGATCGCAGG 59.968 50.000 21.63 21.63 0.00 4.85
545 546 2.936498 AGGAAATTTACCACGATCGCAG 59.064 45.455 16.60 9.37 0.00 5.18
546 547 2.980568 AGGAAATTTACCACGATCGCA 58.019 42.857 16.60 0.00 0.00 5.10
547 548 4.117685 AGTAGGAAATTTACCACGATCGC 58.882 43.478 16.60 0.00 0.00 4.58
548 549 4.440103 CGAGTAGGAAATTTACCACGATCG 59.560 45.833 14.88 14.88 0.00 3.69
549 550 5.231568 CACGAGTAGGAAATTTACCACGATC 59.768 44.000 11.19 0.00 0.00 3.69
550 551 5.107133 CACGAGTAGGAAATTTACCACGAT 58.893 41.667 11.19 0.00 0.00 3.73
551 552 4.022068 ACACGAGTAGGAAATTTACCACGA 60.022 41.667 11.19 0.00 0.00 4.35
552 553 4.090930 CACACGAGTAGGAAATTTACCACG 59.909 45.833 0.00 1.14 0.00 4.94
553 554 4.992951 ACACACGAGTAGGAAATTTACCAC 59.007 41.667 0.00 0.00 0.00 4.16
554 555 4.992319 CACACACGAGTAGGAAATTTACCA 59.008 41.667 0.00 0.00 0.00 3.25
555 556 4.992951 ACACACACGAGTAGGAAATTTACC 59.007 41.667 0.00 0.00 0.00 2.85
556 557 6.423001 AGAACACACACGAGTAGGAAATTTAC 59.577 38.462 0.00 0.00 0.00 2.01
557 558 6.422701 CAGAACACACACGAGTAGGAAATTTA 59.577 38.462 0.00 0.00 0.00 1.40
558 559 5.236478 CAGAACACACACGAGTAGGAAATTT 59.764 40.000 0.00 0.00 0.00 1.82
559 560 4.750098 CAGAACACACACGAGTAGGAAATT 59.250 41.667 0.00 0.00 0.00 1.82
560 561 4.038763 TCAGAACACACACGAGTAGGAAAT 59.961 41.667 0.00 0.00 0.00 2.17
561 562 3.382227 TCAGAACACACACGAGTAGGAAA 59.618 43.478 0.00 0.00 0.00 3.13
562 563 2.953648 TCAGAACACACACGAGTAGGAA 59.046 45.455 0.00 0.00 0.00 3.36
563 564 2.578786 TCAGAACACACACGAGTAGGA 58.421 47.619 0.00 0.00 0.00 2.94
564 565 3.245797 CATCAGAACACACACGAGTAGG 58.754 50.000 0.00 0.00 0.00 3.18
565 566 3.902150 ACATCAGAACACACACGAGTAG 58.098 45.455 0.00 0.00 0.00 2.57
566 567 4.316205 AACATCAGAACACACACGAGTA 57.684 40.909 0.00 0.00 0.00 2.59
567 568 2.890808 ACATCAGAACACACACGAGT 57.109 45.000 0.00 0.00 0.00 4.18
568 569 3.309682 ACAAACATCAGAACACACACGAG 59.690 43.478 0.00 0.00 0.00 4.18
569 570 3.063316 CACAAACATCAGAACACACACGA 59.937 43.478 0.00 0.00 0.00 4.35
570 571 3.353524 CACAAACATCAGAACACACACG 58.646 45.455 0.00 0.00 0.00 4.49
571 572 3.108144 GCACAAACATCAGAACACACAC 58.892 45.455 0.00 0.00 0.00 3.82
572 573 2.098934 GGCACAAACATCAGAACACACA 59.901 45.455 0.00 0.00 0.00 3.72
573 574 2.358898 AGGCACAAACATCAGAACACAC 59.641 45.455 0.00 0.00 0.00 3.82
574 575 2.358582 CAGGCACAAACATCAGAACACA 59.641 45.455 0.00 0.00 0.00 3.72
575 576 2.618241 TCAGGCACAAACATCAGAACAC 59.382 45.455 0.00 0.00 0.00 3.32
576 577 2.929641 TCAGGCACAAACATCAGAACA 58.070 42.857 0.00 0.00 0.00 3.18
577 578 3.988379 TTCAGGCACAAACATCAGAAC 57.012 42.857 0.00 0.00 0.00 3.01
578 579 4.206375 TCTTTCAGGCACAAACATCAGAA 58.794 39.130 0.00 0.00 0.00 3.02
579 580 3.817084 CTCTTTCAGGCACAAACATCAGA 59.183 43.478 0.00 0.00 0.00 3.27
580 581 3.817084 TCTCTTTCAGGCACAAACATCAG 59.183 43.478 0.00 0.00 0.00 2.90
581 582 3.817084 CTCTCTTTCAGGCACAAACATCA 59.183 43.478 0.00 0.00 0.00 3.07
582 583 4.067896 TCTCTCTTTCAGGCACAAACATC 58.932 43.478 0.00 0.00 0.00 3.06
583 584 4.090761 TCTCTCTTTCAGGCACAAACAT 57.909 40.909 0.00 0.00 0.00 2.71
584 585 3.558931 TCTCTCTTTCAGGCACAAACA 57.441 42.857 0.00 0.00 0.00 2.83
585 586 3.365767 GCATCTCTCTTTCAGGCACAAAC 60.366 47.826 0.00 0.00 0.00 2.93
586 587 2.816087 GCATCTCTCTTTCAGGCACAAA 59.184 45.455 0.00 0.00 0.00 2.83
587 588 2.430465 GCATCTCTCTTTCAGGCACAA 58.570 47.619 0.00 0.00 0.00 3.33
588 589 1.673923 CGCATCTCTCTTTCAGGCACA 60.674 52.381 0.00 0.00 0.00 4.57
589 590 1.005340 CGCATCTCTCTTTCAGGCAC 58.995 55.000 0.00 0.00 0.00 5.01
590 591 0.610174 ACGCATCTCTCTTTCAGGCA 59.390 50.000 0.00 0.00 0.00 4.75
591 592 1.663135 GAACGCATCTCTCTTTCAGGC 59.337 52.381 0.00 0.00 0.00 4.85
592 593 2.928757 CAGAACGCATCTCTCTTTCAGG 59.071 50.000 0.00 0.00 35.73 3.86
593 594 2.348059 GCAGAACGCATCTCTCTTTCAG 59.652 50.000 0.00 0.00 41.79 3.02
594 595 2.341257 GCAGAACGCATCTCTCTTTCA 58.659 47.619 0.00 0.00 41.79 2.69
595 596 1.663135 GGCAGAACGCATCTCTCTTTC 59.337 52.381 0.00 0.00 45.17 2.62
596 597 1.277557 AGGCAGAACGCATCTCTCTTT 59.722 47.619 0.00 0.00 45.17 2.52
597 598 0.901124 AGGCAGAACGCATCTCTCTT 59.099 50.000 0.00 0.00 45.17 2.85
598 599 0.901124 AAGGCAGAACGCATCTCTCT 59.099 50.000 0.00 0.00 45.17 3.10
599 600 1.005340 CAAGGCAGAACGCATCTCTC 58.995 55.000 0.00 0.00 45.17 3.20
600 601 0.322975 ACAAGGCAGAACGCATCTCT 59.677 50.000 0.00 0.00 45.17 3.10
601 602 0.445436 CACAAGGCAGAACGCATCTC 59.555 55.000 0.00 0.00 45.17 2.75
602 603 0.957395 CCACAAGGCAGAACGCATCT 60.957 55.000 0.00 0.00 45.17 2.90
603 604 0.955428 TCCACAAGGCAGAACGCATC 60.955 55.000 0.00 0.00 45.17 3.91
604 605 0.957395 CTCCACAAGGCAGAACGCAT 60.957 55.000 0.00 0.00 45.17 4.73
605 606 1.597854 CTCCACAAGGCAGAACGCA 60.598 57.895 0.00 0.00 45.17 5.24
606 607 1.166531 AACTCCACAAGGCAGAACGC 61.167 55.000 0.00 0.00 41.28 4.84
607 608 2.163818 TAACTCCACAAGGCAGAACG 57.836 50.000 0.00 0.00 33.74 3.95
608 609 5.453567 AAATTAACTCCACAAGGCAGAAC 57.546 39.130 0.00 0.00 33.74 3.01
609 610 5.180492 CGTAAATTAACTCCACAAGGCAGAA 59.820 40.000 0.00 0.00 33.74 3.02
610 611 4.693566 CGTAAATTAACTCCACAAGGCAGA 59.306 41.667 0.00 0.00 33.74 4.26
611 612 4.671766 GCGTAAATTAACTCCACAAGGCAG 60.672 45.833 0.00 0.00 33.74 4.85
612 613 3.189702 GCGTAAATTAACTCCACAAGGCA 59.810 43.478 0.00 0.00 33.74 4.75
613 614 3.189702 TGCGTAAATTAACTCCACAAGGC 59.810 43.478 0.00 0.00 33.74 4.35
614 615 4.668177 CGTGCGTAAATTAACTCCACAAGG 60.668 45.833 0.00 0.00 0.00 3.61
615 616 4.084223 ACGTGCGTAAATTAACTCCACAAG 60.084 41.667 0.00 0.00 0.00 3.16
616 617 3.808726 ACGTGCGTAAATTAACTCCACAA 59.191 39.130 0.00 0.00 0.00 3.33
617 618 3.391965 ACGTGCGTAAATTAACTCCACA 58.608 40.909 0.00 0.00 0.00 4.17
618 619 4.394099 AACGTGCGTAAATTAACTCCAC 57.606 40.909 0.00 0.00 0.00 4.02
619 620 4.987285 TGTAACGTGCGTAAATTAACTCCA 59.013 37.500 0.00 0.00 0.00 3.86
620 621 5.514059 TGTAACGTGCGTAAATTAACTCC 57.486 39.130 0.00 0.00 0.00 3.85
621 622 6.527957 ACATGTAACGTGCGTAAATTAACTC 58.472 36.000 0.00 0.00 0.00 3.01
622 623 6.470557 ACATGTAACGTGCGTAAATTAACT 57.529 33.333 0.00 0.00 0.00 2.24
623 624 7.447430 ACTACATGTAACGTGCGTAAATTAAC 58.553 34.615 7.06 0.00 0.00 2.01
624 625 7.579589 ACTACATGTAACGTGCGTAAATTAA 57.420 32.000 7.06 0.00 0.00 1.40
625 626 7.967854 AGTACTACATGTAACGTGCGTAAATTA 59.032 33.333 7.06 0.00 32.25 1.40
626 627 6.808212 AGTACTACATGTAACGTGCGTAAATT 59.192 34.615 7.06 0.00 32.25 1.82
627 628 6.324819 AGTACTACATGTAACGTGCGTAAAT 58.675 36.000 7.06 0.00 32.25 1.40
628 629 5.698832 AGTACTACATGTAACGTGCGTAAA 58.301 37.500 7.06 0.00 32.25 2.01
629 630 5.295431 AGTACTACATGTAACGTGCGTAA 57.705 39.130 7.06 0.00 32.25 3.18
630 631 4.944962 AGTACTACATGTAACGTGCGTA 57.055 40.909 7.06 1.94 32.25 4.42
631 632 3.837213 AGTACTACATGTAACGTGCGT 57.163 42.857 7.06 2.91 32.25 5.24
632 633 4.901814 AGTAGTACTACATGTAACGTGCG 58.098 43.478 29.87 0.00 38.48 5.34
633 634 6.088824 ACAAGTAGTACTACATGTAACGTGC 58.911 40.000 31.98 11.11 43.48 5.34
634 635 9.778993 AATACAAGTAGTACTACATGTAACGTG 57.221 33.333 36.02 22.14 46.44 4.49
641 642 9.525409 GGGTACAAATACAAGTAGTACTACATG 57.475 37.037 29.87 28.94 39.74 3.21
642 643 8.408601 CGGGTACAAATACAAGTAGTACTACAT 58.591 37.037 29.87 18.82 36.28 2.29
643 644 7.609918 TCGGGTACAAATACAAGTAGTACTACA 59.390 37.037 29.87 13.42 36.28 2.74
644 645 7.985476 TCGGGTACAAATACAAGTAGTACTAC 58.015 38.462 23.03 23.03 36.28 2.73
645 646 8.574251 TTCGGGTACAAATACAAGTAGTACTA 57.426 34.615 2.50 0.00 36.28 1.82
646 647 7.177392 ACTTCGGGTACAAATACAAGTAGTACT 59.823 37.037 0.00 0.00 36.28 2.73
647 648 7.315890 ACTTCGGGTACAAATACAAGTAGTAC 58.684 38.462 0.00 0.00 35.05 2.73
648 649 7.466746 ACTTCGGGTACAAATACAAGTAGTA 57.533 36.000 0.00 0.00 37.06 1.82
649 650 6.350629 ACTTCGGGTACAAATACAAGTAGT 57.649 37.500 0.00 0.00 32.40 2.73
650 651 8.814235 CATTACTTCGGGTACAAATACAAGTAG 58.186 37.037 0.00 0.00 32.85 2.57
651 652 7.765360 CCATTACTTCGGGTACAAATACAAGTA 59.235 37.037 0.00 0.00 31.21 2.24
652 653 6.596497 CCATTACTTCGGGTACAAATACAAGT 59.404 38.462 0.00 0.00 32.62 3.16
653 654 6.596497 ACCATTACTTCGGGTACAAATACAAG 59.404 38.462 0.00 0.00 31.89 3.16
654 655 6.474630 ACCATTACTTCGGGTACAAATACAA 58.525 36.000 0.00 0.00 31.89 2.41
655 656 6.052405 ACCATTACTTCGGGTACAAATACA 57.948 37.500 0.00 0.00 31.89 2.29
656 657 7.712205 ACATACCATTACTTCGGGTACAAATAC 59.288 37.037 0.00 0.00 39.79 1.89
657 658 7.794041 ACATACCATTACTTCGGGTACAAATA 58.206 34.615 0.00 0.00 39.79 1.40
658 659 6.655930 ACATACCATTACTTCGGGTACAAAT 58.344 36.000 0.00 0.00 39.79 2.32
659 660 6.052405 ACATACCATTACTTCGGGTACAAA 57.948 37.500 0.00 0.00 39.79 2.83
660 661 5.680594 ACATACCATTACTTCGGGTACAA 57.319 39.130 0.00 0.00 39.79 2.41
661 662 6.788598 TTACATACCATTACTTCGGGTACA 57.211 37.500 0.00 0.00 39.79 2.90
662 663 9.415544 CTTATTACATACCATTACTTCGGGTAC 57.584 37.037 0.00 0.00 39.79 3.34
663 664 9.365906 TCTTATTACATACCATTACTTCGGGTA 57.634 33.333 0.00 0.00 41.12 3.69
664 665 8.253867 TCTTATTACATACCATTACTTCGGGT 57.746 34.615 0.00 0.00 38.70 5.28
665 666 8.582437 TCTCTTATTACATACCATTACTTCGGG 58.418 37.037 0.00 0.00 0.00 5.14
666 667 9.976511 TTCTCTTATTACATACCATTACTTCGG 57.023 33.333 0.00 0.00 0.00 4.30
686 687 9.903682 CACTTCAAATCACACATTATTTCTCTT 57.096 29.630 0.00 0.00 0.00 2.85
687 688 8.025445 GCACTTCAAATCACACATTATTTCTCT 58.975 33.333 0.00 0.00 0.00 3.10
688 689 7.809331 TGCACTTCAAATCACACATTATTTCTC 59.191 33.333 0.00 0.00 0.00 2.87
689 690 7.660112 TGCACTTCAAATCACACATTATTTCT 58.340 30.769 0.00 0.00 0.00 2.52
690 691 7.872163 TGCACTTCAAATCACACATTATTTC 57.128 32.000 0.00 0.00 0.00 2.17
691 692 8.714179 CATTGCACTTCAAATCACACATTATTT 58.286 29.630 0.00 0.00 38.34 1.40
692 693 7.148540 GCATTGCACTTCAAATCACACATTATT 60.149 33.333 3.15 0.00 38.34 1.40
693 694 6.311935 GCATTGCACTTCAAATCACACATTAT 59.688 34.615 3.15 0.00 38.34 1.28
694 695 5.634439 GCATTGCACTTCAAATCACACATTA 59.366 36.000 3.15 0.00 38.34 1.90
695 696 4.449743 GCATTGCACTTCAAATCACACATT 59.550 37.500 3.15 0.00 38.34 2.71
696 697 3.991773 GCATTGCACTTCAAATCACACAT 59.008 39.130 3.15 0.00 38.34 3.21
697 698 3.068448 AGCATTGCACTTCAAATCACACA 59.932 39.130 11.91 0.00 38.34 3.72
698 699 3.645884 AGCATTGCACTTCAAATCACAC 58.354 40.909 11.91 0.00 38.34 3.82
699 700 5.450592 TTAGCATTGCACTTCAAATCACA 57.549 34.783 11.91 0.00 38.34 3.58
700 701 6.956299 ATTTAGCATTGCACTTCAAATCAC 57.044 33.333 11.91 0.00 38.34 3.06
701 702 7.829725 AGTATTTAGCATTGCACTTCAAATCA 58.170 30.769 11.91 0.00 38.34 2.57
702 703 7.970061 TGAGTATTTAGCATTGCACTTCAAATC 59.030 33.333 11.91 1.52 38.34 2.17
703 704 7.829725 TGAGTATTTAGCATTGCACTTCAAAT 58.170 30.769 11.91 9.97 38.34 2.32
704 705 7.213216 TGAGTATTTAGCATTGCACTTCAAA 57.787 32.000 11.91 3.56 38.34 2.69
705 706 6.816134 TGAGTATTTAGCATTGCACTTCAA 57.184 33.333 11.91 0.00 39.32 2.69
706 707 6.038603 GGATGAGTATTTAGCATTGCACTTCA 59.961 38.462 11.91 5.17 0.00 3.02
707 708 6.433766 GGATGAGTATTTAGCATTGCACTTC 58.566 40.000 11.91 1.03 0.00 3.01
708 709 5.008019 CGGATGAGTATTTAGCATTGCACTT 59.992 40.000 11.91 0.00 0.00 3.16
709 710 4.512944 CGGATGAGTATTTAGCATTGCACT 59.487 41.667 11.91 4.81 0.00 4.40
710 711 4.273480 ACGGATGAGTATTTAGCATTGCAC 59.727 41.667 11.91 0.00 0.00 4.57
711 712 4.450976 ACGGATGAGTATTTAGCATTGCA 58.549 39.130 11.91 0.00 0.00 4.08
712 713 4.752101 AGACGGATGAGTATTTAGCATTGC 59.248 41.667 0.00 0.00 0.00 3.56
713 714 5.985530 TGAGACGGATGAGTATTTAGCATTG 59.014 40.000 0.00 0.00 0.00 2.82
714 715 6.161855 TGAGACGGATGAGTATTTAGCATT 57.838 37.500 0.00 0.00 0.00 3.56
715 716 5.791336 TGAGACGGATGAGTATTTAGCAT 57.209 39.130 0.00 0.00 0.00 3.79
716 717 5.592104 TTGAGACGGATGAGTATTTAGCA 57.408 39.130 0.00 0.00 0.00 3.49
717 718 6.903883 TTTTGAGACGGATGAGTATTTAGC 57.096 37.500 0.00 0.00 0.00 3.09
720 721 8.883731 CACTTATTTTGAGACGGATGAGTATTT 58.116 33.333 0.00 0.00 0.00 1.40
721 722 8.041323 ACACTTATTTTGAGACGGATGAGTATT 58.959 33.333 0.00 0.00 0.00 1.89
722 723 7.556844 ACACTTATTTTGAGACGGATGAGTAT 58.443 34.615 0.00 0.00 0.00 2.12
723 724 6.931838 ACACTTATTTTGAGACGGATGAGTA 58.068 36.000 0.00 0.00 0.00 2.59
724 725 5.794894 ACACTTATTTTGAGACGGATGAGT 58.205 37.500 0.00 0.00 0.00 3.41
725 726 6.102663 AGACACTTATTTTGAGACGGATGAG 58.897 40.000 0.00 0.00 0.00 2.90
726 727 6.037786 AGACACTTATTTTGAGACGGATGA 57.962 37.500 0.00 0.00 0.00 2.92
727 728 6.727824 AAGACACTTATTTTGAGACGGATG 57.272 37.500 0.00 0.00 0.00 3.51
728 729 7.064728 GCTTAAGACACTTATTTTGAGACGGAT 59.935 37.037 6.67 0.00 0.00 4.18
729 730 6.367969 GCTTAAGACACTTATTTTGAGACGGA 59.632 38.462 6.67 0.00 0.00 4.69
730 731 6.369065 AGCTTAAGACACTTATTTTGAGACGG 59.631 38.462 6.67 0.00 0.00 4.79
731 732 7.352719 AGCTTAAGACACTTATTTTGAGACG 57.647 36.000 6.67 0.00 0.00 4.18
771 772 9.463902 AGTGTCTCAACTTTATACTAGCTCTAA 57.536 33.333 0.00 0.00 0.00 2.10
772 773 9.463902 AAGTGTCTCAACTTTATACTAGCTCTA 57.536 33.333 0.00 0.00 37.05 2.43
773 774 7.948034 AGTGTCTCAACTTTATACTAGCTCT 57.052 36.000 0.00 0.00 0.00 4.09
783 784 9.199982 CGTCCTAAAATAAGTGTCTCAACTTTA 57.800 33.333 0.00 0.00 40.77 1.85
784 785 7.172703 CCGTCCTAAAATAAGTGTCTCAACTTT 59.827 37.037 0.00 0.00 40.77 2.66
785 786 6.649557 CCGTCCTAAAATAAGTGTCTCAACTT 59.350 38.462 0.00 0.00 42.89 2.66
786 787 6.164176 CCGTCCTAAAATAAGTGTCTCAACT 58.836 40.000 0.00 0.00 0.00 3.16
787 788 5.350640 CCCGTCCTAAAATAAGTGTCTCAAC 59.649 44.000 0.00 0.00 0.00 3.18
788 789 5.484715 CCCGTCCTAAAATAAGTGTCTCAA 58.515 41.667 0.00 0.00 0.00 3.02
789 790 4.081309 CCCCGTCCTAAAATAAGTGTCTCA 60.081 45.833 0.00 0.00 0.00 3.27
790 791 4.081254 ACCCCGTCCTAAAATAAGTGTCTC 60.081 45.833 0.00 0.00 0.00 3.36
791 792 3.842436 ACCCCGTCCTAAAATAAGTGTCT 59.158 43.478 0.00 0.00 0.00 3.41
792 793 3.937079 CACCCCGTCCTAAAATAAGTGTC 59.063 47.826 0.00 0.00 0.00 3.67
793 794 3.583966 TCACCCCGTCCTAAAATAAGTGT 59.416 43.478 0.00 0.00 0.00 3.55
794 795 4.189231 CTCACCCCGTCCTAAAATAAGTG 58.811 47.826 0.00 0.00 0.00 3.16
795 796 3.842436 ACTCACCCCGTCCTAAAATAAGT 59.158 43.478 0.00 0.00 0.00 2.24
796 797 4.482952 ACTCACCCCGTCCTAAAATAAG 57.517 45.455 0.00 0.00 0.00 1.73
797 798 6.564557 ATTACTCACCCCGTCCTAAAATAA 57.435 37.500 0.00 0.00 0.00 1.40
798 799 7.564660 TCTTATTACTCACCCCGTCCTAAAATA 59.435 37.037 0.00 0.00 0.00 1.40
799 800 6.384886 TCTTATTACTCACCCCGTCCTAAAAT 59.615 38.462 0.00 0.00 0.00 1.82
800 801 5.721000 TCTTATTACTCACCCCGTCCTAAAA 59.279 40.000 0.00 0.00 0.00 1.52
801 802 5.271598 TCTTATTACTCACCCCGTCCTAAA 58.728 41.667 0.00 0.00 0.00 1.85
802 803 4.870636 TCTTATTACTCACCCCGTCCTAA 58.129 43.478 0.00 0.00 0.00 2.69
803 804 4.524802 TCTTATTACTCACCCCGTCCTA 57.475 45.455 0.00 0.00 0.00 2.94
804 805 3.393426 TCTTATTACTCACCCCGTCCT 57.607 47.619 0.00 0.00 0.00 3.85
805 806 4.476628 TTTCTTATTACTCACCCCGTCC 57.523 45.455 0.00 0.00 0.00 4.79
806 807 5.936372 AGTTTTTCTTATTACTCACCCCGTC 59.064 40.000 0.00 0.00 0.00 4.79
807 808 5.704053 CAGTTTTTCTTATTACTCACCCCGT 59.296 40.000 0.00 0.00 0.00 5.28
808 809 5.935789 TCAGTTTTTCTTATTACTCACCCCG 59.064 40.000 0.00 0.00 0.00 5.73
809 810 7.754851 TTCAGTTTTTCTTATTACTCACCCC 57.245 36.000 0.00 0.00 0.00 4.95
810 811 9.063615 TCTTTCAGTTTTTCTTATTACTCACCC 57.936 33.333 0.00 0.00 0.00 4.61
812 813 9.600646 GCTCTTTCAGTTTTTCTTATTACTCAC 57.399 33.333 0.00 0.00 0.00 3.51
813 814 9.337396 TGCTCTTTCAGTTTTTCTTATTACTCA 57.663 29.630 0.00 0.00 0.00 3.41
814 815 9.818796 CTGCTCTTTCAGTTTTTCTTATTACTC 57.181 33.333 0.00 0.00 0.00 2.59
815 816 9.343539 ACTGCTCTTTCAGTTTTTCTTATTACT 57.656 29.630 0.00 0.00 44.26 2.24
816 817 9.387123 CACTGCTCTTTCAGTTTTTCTTATTAC 57.613 33.333 0.00 0.00 44.26 1.89
817 818 8.076178 GCACTGCTCTTTCAGTTTTTCTTATTA 58.924 33.333 0.00 0.00 44.26 0.98
818 819 6.920210 GCACTGCTCTTTCAGTTTTTCTTATT 59.080 34.615 0.00 0.00 44.26 1.40
819 820 6.264067 AGCACTGCTCTTTCAGTTTTTCTTAT 59.736 34.615 0.00 0.00 44.26 1.73
820 821 5.590259 AGCACTGCTCTTTCAGTTTTTCTTA 59.410 36.000 0.00 0.00 44.26 2.10
821 822 4.400567 AGCACTGCTCTTTCAGTTTTTCTT 59.599 37.500 0.00 0.00 44.26 2.52
822 823 3.950395 AGCACTGCTCTTTCAGTTTTTCT 59.050 39.130 0.00 0.00 44.26 2.52
823 824 4.298744 AGCACTGCTCTTTCAGTTTTTC 57.701 40.909 0.00 0.00 44.26 2.29
824 825 5.766222 CATAGCACTGCTCTTTCAGTTTTT 58.234 37.500 6.86 0.00 44.26 1.94
825 826 4.320788 GCATAGCACTGCTCTTTCAGTTTT 60.321 41.667 6.86 0.00 44.26 2.43
826 827 3.190118 GCATAGCACTGCTCTTTCAGTTT 59.810 43.478 6.86 0.00 44.26 2.66
827 828 2.746362 GCATAGCACTGCTCTTTCAGTT 59.254 45.455 6.86 0.00 44.26 3.16
829 830 2.352034 CTGCATAGCACTGCTCTTTCAG 59.648 50.000 6.86 7.35 42.75 3.02
830 831 2.353323 CTGCATAGCACTGCTCTTTCA 58.647 47.619 6.86 1.35 42.75 2.69
842 843 7.919639 CTGAAAGAATCGTTGGCTGCATAGC 62.920 48.000 0.50 0.00 43.25 2.97
843 844 3.374988 TGAAAGAATCGTTGGCTGCATAG 59.625 43.478 0.50 0.00 0.00 2.23
844 845 3.342719 TGAAAGAATCGTTGGCTGCATA 58.657 40.909 0.50 0.00 0.00 3.14
845 846 2.161855 TGAAAGAATCGTTGGCTGCAT 58.838 42.857 0.50 0.00 0.00 3.96
846 847 1.536766 CTGAAAGAATCGTTGGCTGCA 59.463 47.619 0.50 0.00 34.07 4.41
847 848 1.537202 ACTGAAAGAATCGTTGGCTGC 59.463 47.619 0.00 0.00 37.43 5.25
848 849 2.095567 CCACTGAAAGAATCGTTGGCTG 60.096 50.000 0.00 0.00 37.43 4.85
849 850 2.154462 CCACTGAAAGAATCGTTGGCT 58.846 47.619 0.00 0.00 37.43 4.75
850 851 1.401539 GCCACTGAAAGAATCGTTGGC 60.402 52.381 0.00 0.00 37.43 4.52
851 852 1.135972 CGCCACTGAAAGAATCGTTGG 60.136 52.381 0.00 0.00 37.43 3.77
852 853 1.135972 CCGCCACTGAAAGAATCGTTG 60.136 52.381 0.00 0.00 37.43 4.10
853 854 1.156736 CCGCCACTGAAAGAATCGTT 58.843 50.000 0.00 0.00 37.43 3.85
854 855 0.320374 TCCGCCACTGAAAGAATCGT 59.680 50.000 0.00 0.00 37.43 3.73
855 856 1.002366 CTCCGCCACTGAAAGAATCG 58.998 55.000 0.00 0.00 37.43 3.34
856 857 1.339151 ACCTCCGCCACTGAAAGAATC 60.339 52.381 0.00 0.00 37.43 2.52
857 858 0.693049 ACCTCCGCCACTGAAAGAAT 59.307 50.000 0.00 0.00 37.43 2.40
858 859 1.275291 CTACCTCCGCCACTGAAAGAA 59.725 52.381 0.00 0.00 37.43 2.52
859 860 0.895530 CTACCTCCGCCACTGAAAGA 59.104 55.000 0.00 0.00 37.43 2.52
860 861 0.895530 TCTACCTCCGCCACTGAAAG 59.104 55.000 0.00 0.00 42.29 2.62
861 862 1.207089 CATCTACCTCCGCCACTGAAA 59.793 52.381 0.00 0.00 0.00 2.69
862 863 0.824109 CATCTACCTCCGCCACTGAA 59.176 55.000 0.00 0.00 0.00 3.02
863 864 1.043116 CCATCTACCTCCGCCACTGA 61.043 60.000 0.00 0.00 0.00 3.41
864 865 1.330655 ACCATCTACCTCCGCCACTG 61.331 60.000 0.00 0.00 0.00 3.66
865 866 1.001760 ACCATCTACCTCCGCCACT 59.998 57.895 0.00 0.00 0.00 4.00
866 867 1.144057 CACCATCTACCTCCGCCAC 59.856 63.158 0.00 0.00 0.00 5.01
867 868 2.063979 CCACCATCTACCTCCGCCA 61.064 63.158 0.00 0.00 0.00 5.69
868 869 2.822399 CCACCATCTACCTCCGCC 59.178 66.667 0.00 0.00 0.00 6.13
869 870 2.109181 GCCACCATCTACCTCCGC 59.891 66.667 0.00 0.00 0.00 5.54
870 871 2.032860 CTGGCCACCATCTACCTCCG 62.033 65.000 0.00 0.00 30.82 4.63
871 872 1.700042 CCTGGCCACCATCTACCTCC 61.700 65.000 0.00 0.00 30.82 4.30
872 873 1.700042 CCCTGGCCACCATCTACCTC 61.700 65.000 0.00 0.00 30.82 3.85
873 874 1.694169 CCCTGGCCACCATCTACCT 60.694 63.158 0.00 0.00 30.82 3.08
874 875 2.001269 ACCCTGGCCACCATCTACC 61.001 63.158 0.00 0.00 30.82 3.18
875 876 1.224592 CACCCTGGCCACCATCTAC 59.775 63.158 0.00 0.00 30.82 2.59
876 877 2.000701 CCACCCTGGCCACCATCTA 61.001 63.158 0.00 0.00 30.82 1.98
877 878 3.341629 CCACCCTGGCCACCATCT 61.342 66.667 0.00 0.00 30.82 2.90
878 879 4.447342 CCCACCCTGGCCACCATC 62.447 72.222 0.00 0.00 35.79 3.51
898 899 2.231380 AAATCTCAGGGTGGGCCGT 61.231 57.895 0.00 0.00 34.97 5.68
899 900 1.750399 CAAATCTCAGGGTGGGCCG 60.750 63.158 0.00 0.00 34.97 6.13
900 901 0.039618 TTCAAATCTCAGGGTGGGCC 59.960 55.000 0.00 0.00 0.00 5.80
901 902 1.923356 TTTCAAATCTCAGGGTGGGC 58.077 50.000 0.00 0.00 0.00 5.36
902 903 5.716703 AGTTATTTTCAAATCTCAGGGTGGG 59.283 40.000 0.00 0.00 0.00 4.61
903 904 6.840780 AGTTATTTTCAAATCTCAGGGTGG 57.159 37.500 0.00 0.00 0.00 4.61
921 922 9.794719 GCCTTTCTCCTATGGTATAAAAGTTAT 57.205 33.333 0.00 0.00 0.00 1.89
922 923 8.999895 AGCCTTTCTCCTATGGTATAAAAGTTA 58.000 33.333 0.00 0.00 0.00 2.24
923 924 7.873195 AGCCTTTCTCCTATGGTATAAAAGTT 58.127 34.615 0.00 0.00 0.00 2.66
924 925 7.453141 AGCCTTTCTCCTATGGTATAAAAGT 57.547 36.000 0.00 0.00 0.00 2.66
925 926 9.847224 TTTAGCCTTTCTCCTATGGTATAAAAG 57.153 33.333 0.00 0.00 0.00 2.27
964 965 7.138736 GCCAGCAACGATACATATACATTTTT 58.861 34.615 0.00 0.00 0.00 1.94
965 966 6.293955 GGCCAGCAACGATACATATACATTTT 60.294 38.462 0.00 0.00 0.00 1.82
966 967 5.181245 GGCCAGCAACGATACATATACATTT 59.819 40.000 0.00 0.00 0.00 2.32
967 968 4.695455 GGCCAGCAACGATACATATACATT 59.305 41.667 0.00 0.00 0.00 2.71
968 969 4.253685 GGCCAGCAACGATACATATACAT 58.746 43.478 0.00 0.00 0.00 2.29
969 970 3.556213 GGGCCAGCAACGATACATATACA 60.556 47.826 4.39 0.00 0.00 2.29
970 971 3.000727 GGGCCAGCAACGATACATATAC 58.999 50.000 4.39 0.00 0.00 1.47
971 972 2.635427 TGGGCCAGCAACGATACATATA 59.365 45.455 0.00 0.00 0.00 0.86
972 973 1.419762 TGGGCCAGCAACGATACATAT 59.580 47.619 0.00 0.00 0.00 1.78
973 974 0.833949 TGGGCCAGCAACGATACATA 59.166 50.000 0.00 0.00 0.00 2.29
974 975 0.748005 GTGGGCCAGCAACGATACAT 60.748 55.000 6.40 0.00 0.00 2.29
975 976 1.376683 GTGGGCCAGCAACGATACA 60.377 57.895 6.40 0.00 0.00 2.29
976 977 2.112815 GGTGGGCCAGCAACGATAC 61.113 63.158 29.78 3.46 34.09 2.24
977 978 2.270850 GGTGGGCCAGCAACGATA 59.729 61.111 29.78 0.00 34.09 2.92
978 979 4.740822 GGGTGGGCCAGCAACGAT 62.741 66.667 34.23 0.00 36.17 3.73
989 990 2.681064 CCATTGTGCCAGGGTGGG 60.681 66.667 0.00 0.00 38.19 4.61
990 991 2.681064 CCCATTGTGCCAGGGTGG 60.681 66.667 0.00 0.00 41.55 4.61
991 992 2.497792 TAGCCCATTGTGCCAGGGTG 62.498 60.000 0.00 0.00 44.69 4.61
992 993 2.215451 CTAGCCCATTGTGCCAGGGT 62.215 60.000 0.00 0.00 44.69 4.34
993 994 1.454479 CTAGCCCATTGTGCCAGGG 60.454 63.158 0.00 0.00 45.68 4.45
994 995 1.454479 CCTAGCCCATTGTGCCAGG 60.454 63.158 0.00 0.00 31.38 4.45
995 996 0.749454 GACCTAGCCCATTGTGCCAG 60.749 60.000 0.00 0.00 0.00 4.85
996 997 1.302949 GACCTAGCCCATTGTGCCA 59.697 57.895 0.00 0.00 0.00 4.92
997 998 1.453928 GGACCTAGCCCATTGTGCC 60.454 63.158 0.00 0.00 0.00 5.01
998 999 1.819632 CGGACCTAGCCCATTGTGC 60.820 63.158 0.00 0.00 0.00 4.57
999 1000 1.819632 GCGGACCTAGCCCATTGTG 60.820 63.158 0.00 0.00 0.00 3.33
1000 1001 2.590092 GCGGACCTAGCCCATTGT 59.410 61.111 0.00 0.00 0.00 2.71
1015 1016 8.195979 CTAATTGTGATTAGCTAGCAGTGGCG 62.196 46.154 18.83 0.00 40.57 5.69
1016 1017 2.315925 TGTGATTAGCTAGCAGTGGC 57.684 50.000 18.83 2.59 41.61 5.01
1017 1018 6.283694 TCTAATTGTGATTAGCTAGCAGTGG 58.716 40.000 18.83 0.00 42.87 4.00
1018 1019 7.959689 ATCTAATTGTGATTAGCTAGCAGTG 57.040 36.000 18.83 0.00 42.87 3.66
1037 1038 9.607988 TCCGATGCATTTTACTCTTTAATCTAA 57.392 29.630 0.00 0.00 0.00 2.10
1038 1039 9.607988 TTCCGATGCATTTTACTCTTTAATCTA 57.392 29.630 0.00 0.00 0.00 1.98
1039 1040 8.506168 TTCCGATGCATTTTACTCTTTAATCT 57.494 30.769 0.00 0.00 0.00 2.40
1040 1041 8.398665 ACTTCCGATGCATTTTACTCTTTAATC 58.601 33.333 0.00 0.00 0.00 1.75
1041 1042 8.281212 ACTTCCGATGCATTTTACTCTTTAAT 57.719 30.769 0.00 0.00 0.00 1.40
1042 1043 7.389330 TGACTTCCGATGCATTTTACTCTTTAA 59.611 33.333 0.00 0.00 0.00 1.52
1043 1044 6.876789 TGACTTCCGATGCATTTTACTCTTTA 59.123 34.615 0.00 0.00 0.00 1.85
1073 1074 2.110901 AGTGAGCAGATGGAGCAAAG 57.889 50.000 0.00 0.00 0.00 2.77
1189 1190 1.072505 GCGGACTGGTCAAAAGGGA 59.927 57.895 3.10 0.00 0.00 4.20
1520 1613 0.240945 GAACAACCAACCCTCATGCG 59.759 55.000 0.00 0.00 0.00 4.73
1534 1627 7.443879 TCTTACATTGATGCACTTGTAGAACAA 59.556 33.333 0.00 0.00 36.54 2.83
2337 2805 5.880054 TTGCTACTAAGTTTCCTTGCATC 57.120 39.130 0.00 0.00 29.31 3.91
2428 2936 6.980397 AGTTTGTGAGTTTGGATCAAATGTTC 59.020 34.615 0.00 0.00 35.74 3.18
2484 2992 6.488344 TGCAATATGTTGTCTTTTGGTCACTA 59.512 34.615 4.00 0.00 37.65 2.74
2960 3553 2.491693 AGAAGACGAGAGAAGAAGCTGG 59.508 50.000 0.00 0.00 0.00 4.85
2975 3568 3.333804 CAGCTCAAGAAAGGGAGAAGAC 58.666 50.000 0.00 0.00 32.87 3.01
3031 3624 1.171308 GGCATGAGCAAGCTGAGAAA 58.829 50.000 0.00 0.00 44.61 2.52
3126 3719 0.687354 GCAGAGGGACAAGGAAGTGA 59.313 55.000 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.