Multiple sequence alignment - TraesCS6B01G182500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G182500 chr6B 100.000 4329 0 0 1 4329 204336501 204332173 0.000000e+00 7995.0
1 TraesCS6B01G182500 chr6D 94.258 2473 75 16 1863 4329 115021750 115019339 0.000000e+00 3718.0
2 TraesCS6B01G182500 chr6D 90.421 1284 58 28 517 1777 115023188 115021947 0.000000e+00 1629.0
3 TraesCS6B01G182500 chr6D 97.727 88 2 0 1770 1857 115021755 115021842 7.500000e-33 152.0
4 TraesCS6B01G182500 chr6D 91.837 49 4 0 330 378 406200192 406200240 7.770000e-08 69.4
5 TraesCS6B01G182500 chr6A 93.735 2490 119 15 1863 4329 143378074 143375599 0.000000e+00 3699.0
6 TraesCS6B01G182500 chr6A 86.566 1258 53 35 552 1745 143379364 143378159 0.000000e+00 1280.0
7 TraesCS6B01G182500 chr6A 93.878 49 3 0 2502 2550 520869916 520869964 1.670000e-09 75.0
8 TraesCS6B01G182500 chr7A 79.091 440 68 14 3897 4329 579012999 579013421 9.170000e-72 281.0
9 TraesCS6B01G182500 chr7A 91.837 49 4 0 1035 1083 678971048 678971000 7.770000e-08 69.4
10 TraesCS6B01G182500 chr5A 78.864 440 70 14 3897 4329 622375154 622374731 4.260000e-70 276.0
11 TraesCS6B01G182500 chr5A 84.375 64 8 2 2508 2570 118670816 118670754 1.300000e-05 62.1
12 TraesCS6B01G182500 chr7B 78.005 441 72 14 3897 4329 113922098 113921675 2.000000e-63 254.0
13 TraesCS6B01G182500 chr7B 93.333 45 3 0 1039 1083 658221333 658221289 2.790000e-07 67.6
14 TraesCS6B01G182500 chr1A 77.652 443 67 16 3871 4299 548490449 548490025 1.560000e-59 241.0
15 TraesCS6B01G182500 chr3B 77.294 436 75 16 3901 4329 735245849 735245431 7.240000e-58 235.0
16 TraesCS6B01G182500 chr3A 83.105 219 25 7 4113 4329 40814313 40814521 5.710000e-44 189.0
17 TraesCS6B01G182500 chr1B 80.080 251 39 5 4081 4329 633192014 633192255 4.450000e-40 176.0
18 TraesCS6B01G182500 chr7D 91.837 49 4 0 1035 1083 587120741 587120693 7.770000e-08 69.4
19 TraesCS6B01G182500 chr5D 84.375 64 8 2 2508 2570 113391591 113391529 1.300000e-05 62.1
20 TraesCS6B01G182500 chr5B 84.375 64 8 2 2508 2570 123760775 123760713 1.300000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G182500 chr6B 204332173 204336501 4328 True 7995.0 7995 100.0000 1 4329 1 chr6B.!!$R1 4328
1 TraesCS6B01G182500 chr6D 115019339 115023188 3849 True 2673.5 3718 92.3395 517 4329 2 chr6D.!!$R1 3812
2 TraesCS6B01G182500 chr6A 143375599 143379364 3765 True 2489.5 3699 90.1505 552 4329 2 chr6A.!!$R1 3777

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
369 370 0.032815 GGCTAGGCATCGAGGAGTTC 59.967 60.0 12.16 0.00 0.00 3.01 F
480 481 0.108898 CAGACGTGAGAGGAAGGCTG 60.109 60.0 0.00 0.00 0.00 4.85 F
515 516 0.108898 GAGAGATGAGCGTGCACTGT 60.109 55.0 16.19 0.65 0.00 3.55 F
1237 1266 0.248825 CGATCTCCTCTTGGCTCGTG 60.249 60.0 0.00 0.00 0.00 4.35 F
1333 1362 0.261109 TGGATGGTTATGGCATGGCA 59.739 50.0 25.52 25.52 0.00 4.92 F
1784 1860 0.326264 AGTGTCACCCAATGGAGCTC 59.674 55.0 4.71 4.71 34.81 4.09 F
2590 2791 0.459759 GACGCAGGTAAGCTACACCC 60.460 60.0 12.66 0.00 36.67 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1274 1303 0.437295 GTAGTACGCGCCACAGTTTG 59.563 55.000 5.73 0.00 0.00 2.93 R
1795 1871 1.472878 AGCTTTGCTGTGCATGAGATG 59.527 47.619 0.00 0.00 38.76 2.90 R
1796 1872 1.835494 AGCTTTGCTGTGCATGAGAT 58.165 45.000 0.00 0.00 38.76 2.75 R
3112 3313 0.260816 AGGGAGGAATGTGCATGCAT 59.739 50.000 25.64 8.04 0.00 3.96 R
3113 3314 0.681887 CAGGGAGGAATGTGCATGCA 60.682 55.000 18.46 18.46 0.00 3.96 R
3114 3315 0.682209 ACAGGGAGGAATGTGCATGC 60.682 55.000 11.82 11.82 0.00 4.06 R
4111 4329 0.182061 AGCTCATCCGAGGGTACGTA 59.818 55.000 0.00 0.00 39.88 3.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.190849 CGCTCGCCACCATGTCAG 61.191 66.667 0.00 0.00 0.00 3.51
19 20 2.265739 GCTCGCCACCATGTCAGA 59.734 61.111 0.00 0.00 0.00 3.27
20 21 2.103042 GCTCGCCACCATGTCAGAC 61.103 63.158 0.00 0.00 0.00 3.51
21 22 1.593787 CTCGCCACCATGTCAGACT 59.406 57.895 1.31 0.00 0.00 3.24
22 23 0.459237 CTCGCCACCATGTCAGACTC 60.459 60.000 1.31 0.00 0.00 3.36
23 24 1.184970 TCGCCACCATGTCAGACTCA 61.185 55.000 1.31 0.00 0.00 3.41
24 25 0.320683 CGCCACCATGTCAGACTCAA 60.321 55.000 1.31 0.00 0.00 3.02
25 26 1.446907 GCCACCATGTCAGACTCAAG 58.553 55.000 1.31 0.00 0.00 3.02
26 27 1.271054 GCCACCATGTCAGACTCAAGT 60.271 52.381 1.31 0.00 0.00 3.16
27 28 2.811873 GCCACCATGTCAGACTCAAGTT 60.812 50.000 1.31 0.00 0.00 2.66
28 29 3.070018 CCACCATGTCAGACTCAAGTTC 58.930 50.000 1.31 0.00 0.00 3.01
29 30 3.070018 CACCATGTCAGACTCAAGTTCC 58.930 50.000 1.31 0.00 0.00 3.62
30 31 2.289072 ACCATGTCAGACTCAAGTTCCG 60.289 50.000 1.31 0.00 0.00 4.30
31 32 1.728971 CATGTCAGACTCAAGTTCCGC 59.271 52.381 1.31 0.00 0.00 5.54
32 33 0.033504 TGTCAGACTCAAGTTCCGCC 59.966 55.000 1.31 0.00 0.00 6.13
33 34 0.670854 GTCAGACTCAAGTTCCGCCC 60.671 60.000 0.00 0.00 0.00 6.13
34 35 0.832135 TCAGACTCAAGTTCCGCCCT 60.832 55.000 0.00 0.00 0.00 5.19
35 36 0.671781 CAGACTCAAGTTCCGCCCTG 60.672 60.000 0.00 0.00 0.00 4.45
36 37 1.376037 GACTCAAGTTCCGCCCTGG 60.376 63.158 0.00 0.00 40.09 4.45
47 48 4.386413 GCCCTGGATGGCGAATAG 57.614 61.111 0.00 0.00 42.54 1.73
48 49 1.968540 GCCCTGGATGGCGAATAGC 60.969 63.158 0.00 0.00 42.54 2.97
61 62 3.784701 CGAATAGCTCGCCCTACATAT 57.215 47.619 0.00 0.00 41.49 1.78
62 63 4.111375 CGAATAGCTCGCCCTACATATT 57.889 45.455 0.00 0.00 41.49 1.28
63 64 3.859961 CGAATAGCTCGCCCTACATATTG 59.140 47.826 0.00 0.00 41.49 1.90
64 65 2.743636 TAGCTCGCCCTACATATTGC 57.256 50.000 0.00 0.00 0.00 3.56
65 66 0.035458 AGCTCGCCCTACATATTGCC 59.965 55.000 0.00 0.00 0.00 4.52
66 67 0.955919 GCTCGCCCTACATATTGCCC 60.956 60.000 0.00 0.00 0.00 5.36
67 68 0.687354 CTCGCCCTACATATTGCCCT 59.313 55.000 0.00 0.00 0.00 5.19
68 69 0.685097 TCGCCCTACATATTGCCCTC 59.315 55.000 0.00 0.00 0.00 4.30
69 70 0.321653 CGCCCTACATATTGCCCTCC 60.322 60.000 0.00 0.00 0.00 4.30
70 71 0.321653 GCCCTACATATTGCCCTCCG 60.322 60.000 0.00 0.00 0.00 4.63
71 72 1.056660 CCCTACATATTGCCCTCCGT 58.943 55.000 0.00 0.00 0.00 4.69
72 73 1.002087 CCCTACATATTGCCCTCCGTC 59.998 57.143 0.00 0.00 0.00 4.79
73 74 1.336887 CCTACATATTGCCCTCCGTCG 60.337 57.143 0.00 0.00 0.00 5.12
74 75 0.677288 TACATATTGCCCTCCGTCGG 59.323 55.000 4.39 4.39 0.00 4.79
75 76 1.335132 ACATATTGCCCTCCGTCGGT 61.335 55.000 11.88 0.00 0.00 4.69
76 77 0.600255 CATATTGCCCTCCGTCGGTC 60.600 60.000 11.88 0.15 0.00 4.79
77 78 2.083835 ATATTGCCCTCCGTCGGTCG 62.084 60.000 11.88 3.77 39.52 4.79
81 82 3.367743 CCCTCCGTCGGTCGTGAA 61.368 66.667 11.88 0.00 37.94 3.18
82 83 2.707849 CCCTCCGTCGGTCGTGAAT 61.708 63.158 11.88 0.00 37.94 2.57
83 84 1.516386 CCTCCGTCGGTCGTGAATG 60.516 63.158 11.88 0.00 37.94 2.67
84 85 1.516386 CTCCGTCGGTCGTGAATGG 60.516 63.158 11.88 0.00 37.94 3.16
85 86 1.929806 CTCCGTCGGTCGTGAATGGA 61.930 60.000 11.88 0.00 37.94 3.41
86 87 1.141019 CCGTCGGTCGTGAATGGAT 59.859 57.895 2.08 0.00 37.94 3.41
87 88 0.382873 CCGTCGGTCGTGAATGGATA 59.617 55.000 2.08 0.00 37.94 2.59
88 89 1.599667 CCGTCGGTCGTGAATGGATAG 60.600 57.143 2.08 0.00 37.94 2.08
89 90 1.599667 CGTCGGTCGTGAATGGATAGG 60.600 57.143 0.00 0.00 34.52 2.57
90 91 1.037493 TCGGTCGTGAATGGATAGGG 58.963 55.000 0.00 0.00 0.00 3.53
91 92 0.033504 CGGTCGTGAATGGATAGGGG 59.966 60.000 0.00 0.00 0.00 4.79
92 93 0.250338 GGTCGTGAATGGATAGGGGC 60.250 60.000 0.00 0.00 0.00 5.80
93 94 0.600255 GTCGTGAATGGATAGGGGCG 60.600 60.000 0.00 0.00 0.00 6.13
94 95 1.301716 CGTGAATGGATAGGGGCGG 60.302 63.158 0.00 0.00 0.00 6.13
95 96 1.600916 GTGAATGGATAGGGGCGGC 60.601 63.158 0.00 0.00 0.00 6.53
96 97 2.075566 TGAATGGATAGGGGCGGCA 61.076 57.895 12.47 0.00 0.00 5.69
97 98 1.600916 GAATGGATAGGGGCGGCAC 60.601 63.158 12.47 7.44 0.00 5.01
112 113 1.726853 GGCACGTCAAGTTATGAGCT 58.273 50.000 0.00 0.00 39.19 4.09
113 114 1.661112 GGCACGTCAAGTTATGAGCTC 59.339 52.381 6.82 6.82 39.19 4.09
114 115 2.611518 GCACGTCAAGTTATGAGCTCT 58.388 47.619 16.19 3.04 39.19 4.09
115 116 2.600867 GCACGTCAAGTTATGAGCTCTC 59.399 50.000 16.19 3.17 39.19 3.20
116 117 3.182967 CACGTCAAGTTATGAGCTCTCC 58.817 50.000 16.19 0.00 39.19 3.71
117 118 2.166664 ACGTCAAGTTATGAGCTCTCCC 59.833 50.000 16.19 0.21 39.19 4.30
118 119 2.428890 CGTCAAGTTATGAGCTCTCCCT 59.571 50.000 16.19 2.69 39.19 4.20
119 120 3.736433 CGTCAAGTTATGAGCTCTCCCTG 60.736 52.174 16.19 5.16 39.19 4.45
120 121 2.768527 TCAAGTTATGAGCTCTCCCTGG 59.231 50.000 16.19 3.53 33.04 4.45
121 122 2.503356 CAAGTTATGAGCTCTCCCTGGT 59.497 50.000 16.19 0.00 0.00 4.00
122 123 3.689872 AGTTATGAGCTCTCCCTGGTA 57.310 47.619 16.19 0.00 0.00 3.25
123 124 3.571590 AGTTATGAGCTCTCCCTGGTAG 58.428 50.000 16.19 0.00 0.00 3.18
124 125 2.630580 GTTATGAGCTCTCCCTGGTAGG 59.369 54.545 16.19 0.00 34.30 3.18
125 126 0.762461 ATGAGCTCTCCCTGGTAGGC 60.762 60.000 16.19 0.00 32.73 3.93
126 127 2.041405 AGCTCTCCCTGGTAGGCC 60.041 66.667 0.00 0.00 32.73 5.19
127 128 3.541713 GCTCTCCCTGGTAGGCCG 61.542 72.222 0.00 0.00 37.67 6.13
128 129 2.279073 CTCTCCCTGGTAGGCCGA 59.721 66.667 0.00 0.00 37.67 5.54
129 130 1.381327 CTCTCCCTGGTAGGCCGAA 60.381 63.158 0.00 0.00 37.67 4.30
130 131 1.381327 TCTCCCTGGTAGGCCGAAG 60.381 63.158 0.00 0.00 37.67 3.79
152 153 2.084844 CAACTCATGCTCTGCGTCC 58.915 57.895 0.00 0.00 0.00 4.79
153 154 0.390866 CAACTCATGCTCTGCGTCCT 60.391 55.000 0.00 0.00 0.00 3.85
154 155 0.108424 AACTCATGCTCTGCGTCCTC 60.108 55.000 0.00 0.00 0.00 3.71
155 156 1.227205 CTCATGCTCTGCGTCCTCC 60.227 63.158 0.00 0.00 0.00 4.30
156 157 2.202987 CATGCTCTGCGTCCTCCC 60.203 66.667 0.00 0.00 0.00 4.30
157 158 3.474570 ATGCTCTGCGTCCTCCCC 61.475 66.667 0.00 0.00 0.00 4.81
158 159 3.991924 ATGCTCTGCGTCCTCCCCT 62.992 63.158 0.00 0.00 0.00 4.79
159 160 4.154347 GCTCTGCGTCCTCCCCTG 62.154 72.222 0.00 0.00 0.00 4.45
160 161 3.465403 CTCTGCGTCCTCCCCTGG 61.465 72.222 0.00 0.00 0.00 4.45
161 162 3.965026 CTCTGCGTCCTCCCCTGGA 62.965 68.421 0.00 0.00 0.00 3.86
172 173 3.847602 CCCTGGAGAGGCGAGCAG 61.848 72.222 0.00 0.00 38.17 4.24
173 174 3.073735 CCTGGAGAGGCGAGCAGT 61.074 66.667 0.00 0.00 30.52 4.40
174 175 2.183811 CTGGAGAGGCGAGCAGTG 59.816 66.667 0.00 0.00 0.00 3.66
175 176 3.368190 CTGGAGAGGCGAGCAGTGG 62.368 68.421 0.00 0.00 0.00 4.00
176 177 4.828925 GGAGAGGCGAGCAGTGGC 62.829 72.222 0.00 0.00 41.61 5.01
186 187 4.522971 GCAGTGGCTAGTAGCACC 57.477 61.111 23.24 12.58 44.75 5.01
187 188 1.596934 GCAGTGGCTAGTAGCACCA 59.403 57.895 23.24 10.47 44.75 4.17
188 189 0.036388 GCAGTGGCTAGTAGCACCAA 60.036 55.000 23.24 3.43 44.75 3.67
189 190 1.610624 GCAGTGGCTAGTAGCACCAAA 60.611 52.381 23.24 0.97 44.75 3.28
190 191 2.076863 CAGTGGCTAGTAGCACCAAAC 58.923 52.381 23.24 12.37 44.75 2.93
191 192 1.697432 AGTGGCTAGTAGCACCAAACA 59.303 47.619 23.24 8.32 44.75 2.83
192 193 1.804748 GTGGCTAGTAGCACCAAACAC 59.195 52.381 23.24 15.93 44.75 3.32
193 194 1.271163 TGGCTAGTAGCACCAAACACC 60.271 52.381 23.24 3.62 44.75 4.16
194 195 1.003233 GGCTAGTAGCACCAAACACCT 59.997 52.381 23.24 0.00 44.75 4.00
195 196 2.347731 GCTAGTAGCACCAAACACCTC 58.652 52.381 17.47 0.00 41.89 3.85
196 197 2.935676 GCTAGTAGCACCAAACACCTCC 60.936 54.545 17.47 0.00 41.89 4.30
197 198 1.136828 AGTAGCACCAAACACCTCCA 58.863 50.000 0.00 0.00 0.00 3.86
198 199 1.493022 AGTAGCACCAAACACCTCCAA 59.507 47.619 0.00 0.00 0.00 3.53
199 200 2.092103 AGTAGCACCAAACACCTCCAAA 60.092 45.455 0.00 0.00 0.00 3.28
200 201 1.111277 AGCACCAAACACCTCCAAAC 58.889 50.000 0.00 0.00 0.00 2.93
201 202 0.104120 GCACCAAACACCTCCAAACC 59.896 55.000 0.00 0.00 0.00 3.27
202 203 0.750249 CACCAAACACCTCCAAACCC 59.250 55.000 0.00 0.00 0.00 4.11
203 204 0.634465 ACCAAACACCTCCAAACCCT 59.366 50.000 0.00 0.00 0.00 4.34
204 205 1.039856 CCAAACACCTCCAAACCCTG 58.960 55.000 0.00 0.00 0.00 4.45
205 206 0.389025 CAAACACCTCCAAACCCTGC 59.611 55.000 0.00 0.00 0.00 4.85
206 207 0.261696 AAACACCTCCAAACCCTGCT 59.738 50.000 0.00 0.00 0.00 4.24
207 208 0.178990 AACACCTCCAAACCCTGCTC 60.179 55.000 0.00 0.00 0.00 4.26
208 209 1.352622 ACACCTCCAAACCCTGCTCA 61.353 55.000 0.00 0.00 0.00 4.26
209 210 0.038744 CACCTCCAAACCCTGCTCAT 59.961 55.000 0.00 0.00 0.00 2.90
210 211 0.329596 ACCTCCAAACCCTGCTCATC 59.670 55.000 0.00 0.00 0.00 2.92
211 212 0.394899 CCTCCAAACCCTGCTCATCC 60.395 60.000 0.00 0.00 0.00 3.51
212 213 0.394899 CTCCAAACCCTGCTCATCCC 60.395 60.000 0.00 0.00 0.00 3.85
213 214 1.750399 CCAAACCCTGCTCATCCCG 60.750 63.158 0.00 0.00 0.00 5.14
214 215 1.750399 CAAACCCTGCTCATCCCGG 60.750 63.158 0.00 0.00 0.00 5.73
215 216 1.923395 AAACCCTGCTCATCCCGGA 60.923 57.895 0.73 0.00 0.00 5.14
216 217 1.281925 AAACCCTGCTCATCCCGGAT 61.282 55.000 0.73 0.00 0.00 4.18
217 218 1.987807 AACCCTGCTCATCCCGGATG 61.988 60.000 20.03 20.03 41.00 3.51
218 219 2.142761 CCCTGCTCATCCCGGATGA 61.143 63.158 25.56 25.56 45.35 2.92
219 220 1.070445 CCTGCTCATCCCGGATGAC 59.930 63.158 23.92 19.78 43.11 3.06
220 221 1.300465 CTGCTCATCCCGGATGACG 60.300 63.158 23.92 19.63 43.11 4.35
221 222 2.021068 CTGCTCATCCCGGATGACGT 62.021 60.000 23.92 0.00 43.11 4.34
222 223 1.144057 GCTCATCCCGGATGACGTT 59.856 57.895 23.92 0.00 43.11 3.99
223 224 1.154205 GCTCATCCCGGATGACGTTG 61.154 60.000 23.92 15.91 43.11 4.10
224 225 0.530650 CTCATCCCGGATGACGTTGG 60.531 60.000 23.92 11.75 43.11 3.77
225 226 0.973496 TCATCCCGGATGACGTTGGA 60.973 55.000 23.92 2.51 43.11 3.53
226 227 0.106708 CATCCCGGATGACGTTGGAT 59.893 55.000 21.29 0.00 42.09 3.41
227 228 0.106708 ATCCCGGATGACGTTGGATG 59.893 55.000 0.73 0.00 40.59 3.51
228 229 2.180204 CCCGGATGACGTTGGATGC 61.180 63.158 0.73 0.00 42.24 3.91
229 230 1.153369 CCGGATGACGTTGGATGCT 60.153 57.895 0.00 0.00 42.24 3.79
230 231 1.154205 CCGGATGACGTTGGATGCTC 61.154 60.000 0.00 0.00 42.24 4.26
231 232 0.460109 CGGATGACGTTGGATGCTCA 60.460 55.000 0.00 0.00 37.93 4.26
232 233 1.807755 CGGATGACGTTGGATGCTCAT 60.808 52.381 0.00 0.00 37.93 2.90
233 234 1.600957 GGATGACGTTGGATGCTCATG 59.399 52.381 0.00 0.00 0.00 3.07
234 235 1.003116 GATGACGTTGGATGCTCATGC 60.003 52.381 0.00 0.00 40.20 4.06
235 236 1.026182 TGACGTTGGATGCTCATGCC 61.026 55.000 0.00 0.00 38.71 4.40
236 237 0.745845 GACGTTGGATGCTCATGCCT 60.746 55.000 0.00 0.00 38.71 4.75
237 238 1.028330 ACGTTGGATGCTCATGCCTG 61.028 55.000 0.00 0.00 38.71 4.85
238 239 1.436336 GTTGGATGCTCATGCCTGC 59.564 57.895 0.00 0.00 38.71 4.85
239 240 1.000646 TTGGATGCTCATGCCTGCA 60.001 52.632 9.56 9.56 43.67 4.41
244 245 1.325355 ATGCTCATGCCTGCATAACC 58.675 50.000 15.50 0.00 46.53 2.85
245 246 1.096967 TGCTCATGCCTGCATAACCG 61.097 55.000 3.98 0.00 38.71 4.44
246 247 0.815213 GCTCATGCCTGCATAACCGA 60.815 55.000 3.98 0.00 34.91 4.69
247 248 1.224075 CTCATGCCTGCATAACCGAG 58.776 55.000 3.98 3.80 34.91 4.63
248 249 0.541392 TCATGCCTGCATAACCGAGT 59.459 50.000 3.98 0.00 34.91 4.18
249 250 1.760029 TCATGCCTGCATAACCGAGTA 59.240 47.619 3.98 0.00 34.91 2.59
250 251 2.169561 TCATGCCTGCATAACCGAGTAA 59.830 45.455 3.98 0.00 34.91 2.24
251 252 3.141398 CATGCCTGCATAACCGAGTAAT 58.859 45.455 3.98 0.00 34.91 1.89
252 253 4.039852 TCATGCCTGCATAACCGAGTAATA 59.960 41.667 3.98 0.00 34.91 0.98
253 254 3.990092 TGCCTGCATAACCGAGTAATAG 58.010 45.455 0.00 0.00 0.00 1.73
254 255 3.244078 TGCCTGCATAACCGAGTAATAGG 60.244 47.826 0.00 0.00 0.00 2.57
255 256 3.326747 CCTGCATAACCGAGTAATAGGC 58.673 50.000 0.00 0.00 0.00 3.93
256 257 2.987149 CTGCATAACCGAGTAATAGGCG 59.013 50.000 0.00 0.00 0.00 5.52
257 258 1.725164 GCATAACCGAGTAATAGGCGC 59.275 52.381 0.00 0.00 0.00 6.53
258 259 1.983605 CATAACCGAGTAATAGGCGCG 59.016 52.381 0.00 0.00 0.00 6.86
260 261 2.049433 CCGAGTAATAGGCGCGGG 60.049 66.667 8.83 0.00 43.74 6.13
261 262 2.049433 CGAGTAATAGGCGCGGGG 60.049 66.667 8.83 0.00 0.00 5.73
262 263 2.357154 GAGTAATAGGCGCGGGGC 60.357 66.667 18.87 18.87 42.51 5.80
280 281 4.717629 CACTCACCGCGCGAGGAA 62.718 66.667 35.95 20.67 34.66 3.36
281 282 4.421479 ACTCACCGCGCGAGGAAG 62.421 66.667 35.95 29.50 34.66 3.46
282 283 4.116328 CTCACCGCGCGAGGAAGA 62.116 66.667 35.95 27.58 34.73 2.87
283 284 3.626680 CTCACCGCGCGAGGAAGAA 62.627 63.158 35.95 15.35 34.73 2.52
284 285 3.181967 CACCGCGCGAGGAAGAAG 61.182 66.667 35.95 14.59 34.73 2.85
285 286 4.436998 ACCGCGCGAGGAAGAAGG 62.437 66.667 35.95 13.76 34.73 3.46
286 287 4.129737 CCGCGCGAGGAAGAAGGA 62.130 66.667 34.63 0.00 0.00 3.36
287 288 2.580867 CGCGCGAGGAAGAAGGAG 60.581 66.667 28.94 0.00 0.00 3.69
288 289 2.202810 GCGCGAGGAAGAAGGAGG 60.203 66.667 12.10 0.00 0.00 4.30
289 290 3.007973 GCGCGAGGAAGAAGGAGGT 62.008 63.158 12.10 0.00 0.00 3.85
290 291 1.664321 GCGCGAGGAAGAAGGAGGTA 61.664 60.000 12.10 0.00 0.00 3.08
291 292 0.382515 CGCGAGGAAGAAGGAGGTAG 59.617 60.000 0.00 0.00 0.00 3.18
292 293 0.103390 GCGAGGAAGAAGGAGGTAGC 59.897 60.000 0.00 0.00 0.00 3.58
293 294 0.382515 CGAGGAAGAAGGAGGTAGCG 59.617 60.000 0.00 0.00 0.00 4.26
294 295 1.765230 GAGGAAGAAGGAGGTAGCGA 58.235 55.000 0.00 0.00 0.00 4.93
295 296 2.312390 GAGGAAGAAGGAGGTAGCGAT 58.688 52.381 0.00 0.00 0.00 4.58
296 297 3.488363 GAGGAAGAAGGAGGTAGCGATA 58.512 50.000 0.00 0.00 0.00 2.92
297 298 3.492337 AGGAAGAAGGAGGTAGCGATAG 58.508 50.000 0.00 0.00 0.00 2.08
298 299 2.559231 GGAAGAAGGAGGTAGCGATAGG 59.441 54.545 0.00 0.00 0.00 2.57
299 300 1.623163 AGAAGGAGGTAGCGATAGGC 58.377 55.000 0.00 0.00 44.05 3.93
308 309 4.057428 GCGATAGGCGGCGGAGAT 62.057 66.667 9.78 0.00 41.29 2.75
309 310 2.697761 GCGATAGGCGGCGGAGATA 61.698 63.158 9.78 0.00 41.29 1.98
310 311 1.429825 CGATAGGCGGCGGAGATAG 59.570 63.158 9.78 0.00 36.03 2.08
311 312 1.025113 CGATAGGCGGCGGAGATAGA 61.025 60.000 9.78 0.00 36.03 1.98
312 313 0.452585 GATAGGCGGCGGAGATAGAC 59.547 60.000 9.78 0.00 0.00 2.59
313 314 1.306642 ATAGGCGGCGGAGATAGACG 61.307 60.000 9.78 0.00 44.15 4.18
314 315 4.344474 GGCGGCGGAGATAGACGG 62.344 72.222 9.78 0.00 41.10 4.79
319 320 4.344474 CGGAGATAGACGGCCGCC 62.344 72.222 28.58 16.50 35.47 6.13
320 321 2.913060 GGAGATAGACGGCCGCCT 60.913 66.667 28.58 24.39 0.00 5.52
321 322 2.499827 GGAGATAGACGGCCGCCTT 61.500 63.158 28.58 13.82 0.00 4.35
322 323 1.007154 GAGATAGACGGCCGCCTTC 60.007 63.158 28.58 18.96 0.00 3.46
323 324 1.735376 GAGATAGACGGCCGCCTTCA 61.735 60.000 28.58 5.51 0.00 3.02
324 325 1.143183 GATAGACGGCCGCCTTCAA 59.857 57.895 28.58 4.57 0.00 2.69
325 326 1.152383 GATAGACGGCCGCCTTCAAC 61.152 60.000 28.58 8.06 0.00 3.18
326 327 1.895020 ATAGACGGCCGCCTTCAACA 61.895 55.000 28.58 3.63 0.00 3.33
327 328 2.775032 TAGACGGCCGCCTTCAACAC 62.775 60.000 28.58 5.46 0.00 3.32
334 335 3.027292 GCCTTCAACACCGCGAAA 58.973 55.556 8.23 0.00 0.00 3.46
335 336 1.357334 GCCTTCAACACCGCGAAAA 59.643 52.632 8.23 0.00 0.00 2.29
336 337 0.039527 GCCTTCAACACCGCGAAAAT 60.040 50.000 8.23 0.00 0.00 1.82
337 338 1.685302 CCTTCAACACCGCGAAAATG 58.315 50.000 8.23 2.49 0.00 2.32
338 339 1.052287 CTTCAACACCGCGAAAATGC 58.948 50.000 8.23 0.00 0.00 3.56
339 340 0.318275 TTCAACACCGCGAAAATGCC 60.318 50.000 8.23 0.00 0.00 4.40
340 341 1.007964 CAACACCGCGAAAATGCCA 60.008 52.632 8.23 0.00 0.00 4.92
341 342 0.596083 CAACACCGCGAAAATGCCAA 60.596 50.000 8.23 0.00 0.00 4.52
342 343 0.318614 AACACCGCGAAAATGCCAAG 60.319 50.000 8.23 0.00 0.00 3.61
343 344 1.444212 CACCGCGAAAATGCCAAGG 60.444 57.895 8.23 0.00 0.00 3.61
344 345 2.506881 CCGCGAAAATGCCAAGGC 60.507 61.111 8.23 3.61 42.35 4.35
359 360 2.908940 GGCATTGCGGCTAGGCAT 60.909 61.111 21.04 0.00 43.52 4.40
360 361 2.641559 GCATTGCGGCTAGGCATC 59.358 61.111 17.45 7.81 43.52 3.91
361 362 2.941333 CATTGCGGCTAGGCATCG 59.059 61.111 17.45 0.94 43.52 3.84
362 363 1.595109 CATTGCGGCTAGGCATCGA 60.595 57.895 17.45 7.48 43.52 3.59
363 364 1.301244 ATTGCGGCTAGGCATCGAG 60.301 57.895 17.45 0.15 43.52 4.04
364 365 2.721971 ATTGCGGCTAGGCATCGAGG 62.722 60.000 17.45 0.00 43.52 4.63
365 366 3.606662 GCGGCTAGGCATCGAGGA 61.607 66.667 17.45 0.00 0.00 3.71
366 367 2.647875 CGGCTAGGCATCGAGGAG 59.352 66.667 17.45 0.00 0.00 3.69
367 368 2.196925 CGGCTAGGCATCGAGGAGT 61.197 63.158 17.45 0.00 0.00 3.85
368 369 1.739338 CGGCTAGGCATCGAGGAGTT 61.739 60.000 17.45 0.00 0.00 3.01
369 370 0.032815 GGCTAGGCATCGAGGAGTTC 59.967 60.000 12.16 0.00 0.00 3.01
378 379 2.103340 GAGGAGTTCGAGCGGCTC 59.897 66.667 19.92 19.92 0.00 4.70
379 380 2.676822 AGGAGTTCGAGCGGCTCA 60.677 61.111 27.83 13.43 0.00 4.26
380 381 2.507324 GGAGTTCGAGCGGCTCAC 60.507 66.667 27.83 19.37 0.00 3.51
381 382 2.258591 GAGTTCGAGCGGCTCACA 59.741 61.111 27.83 12.27 0.00 3.58
382 383 2.049063 AGTTCGAGCGGCTCACAC 60.049 61.111 27.83 21.92 0.00 3.82
383 384 2.049063 GTTCGAGCGGCTCACACT 60.049 61.111 27.83 0.00 0.00 3.55
384 385 2.049156 TTCGAGCGGCTCACACTG 60.049 61.111 27.83 12.48 0.00 3.66
385 386 2.856628 TTCGAGCGGCTCACACTGT 61.857 57.895 27.83 0.00 0.00 3.55
386 387 2.356313 CGAGCGGCTCACACTGTT 60.356 61.111 27.83 0.00 0.00 3.16
387 388 2.661566 CGAGCGGCTCACACTGTTG 61.662 63.158 27.83 6.82 0.00 3.33
388 389 1.300931 GAGCGGCTCACACTGTTGA 60.301 57.895 24.42 0.00 0.00 3.18
389 390 1.287730 GAGCGGCTCACACTGTTGAG 61.288 60.000 24.42 12.59 45.15 3.02
390 391 2.320587 GCGGCTCACACTGTTGAGG 61.321 63.158 16.30 6.85 42.95 3.86
391 392 1.669115 CGGCTCACACTGTTGAGGG 60.669 63.158 16.30 0.00 42.95 4.30
392 393 1.302832 GGCTCACACTGTTGAGGGG 60.303 63.158 16.30 0.00 42.95 4.79
393 394 1.451936 GCTCACACTGTTGAGGGGT 59.548 57.895 16.30 0.00 42.95 4.95
394 395 0.179018 GCTCACACTGTTGAGGGGTT 60.179 55.000 16.30 0.00 42.95 4.11
395 396 1.597742 CTCACACTGTTGAGGGGTTG 58.402 55.000 10.31 0.00 39.59 3.77
396 397 0.465460 TCACACTGTTGAGGGGTTGC 60.465 55.000 0.00 0.00 0.00 4.17
397 398 1.152756 ACACTGTTGAGGGGTTGCC 60.153 57.895 0.00 0.00 0.00 4.52
398 399 1.152777 CACTGTTGAGGGGTTGCCA 60.153 57.895 0.00 0.00 0.00 4.92
399 400 0.540365 CACTGTTGAGGGGTTGCCAT 60.540 55.000 0.00 0.00 0.00 4.40
400 401 0.540365 ACTGTTGAGGGGTTGCCATG 60.540 55.000 0.00 0.00 0.00 3.66
401 402 0.540365 CTGTTGAGGGGTTGCCATGT 60.540 55.000 0.00 0.00 0.00 3.21
402 403 0.539438 TGTTGAGGGGTTGCCATGTC 60.539 55.000 0.00 0.00 0.00 3.06
403 404 1.076549 TTGAGGGGTTGCCATGTCC 59.923 57.895 0.00 0.00 0.00 4.02
404 405 2.438434 GAGGGGTTGCCATGTCCG 60.438 66.667 0.00 0.00 0.00 4.79
405 406 3.995506 GAGGGGTTGCCATGTCCGG 62.996 68.421 0.00 0.00 0.00 5.14
406 407 4.360405 GGGGTTGCCATGTCCGGT 62.360 66.667 0.00 0.00 0.00 5.28
407 408 2.750237 GGGTTGCCATGTCCGGTC 60.750 66.667 0.00 0.00 0.00 4.79
408 409 2.351276 GGTTGCCATGTCCGGTCT 59.649 61.111 0.00 0.00 0.00 3.85
409 410 1.600107 GGTTGCCATGTCCGGTCTA 59.400 57.895 0.00 0.00 0.00 2.59
410 411 0.180406 GGTTGCCATGTCCGGTCTAT 59.820 55.000 0.00 0.00 0.00 1.98
411 412 1.299541 GTTGCCATGTCCGGTCTATG 58.700 55.000 0.00 4.87 0.00 2.23
412 413 0.463654 TTGCCATGTCCGGTCTATGC 60.464 55.000 0.00 0.80 0.00 3.14
413 414 1.337384 TGCCATGTCCGGTCTATGCT 61.337 55.000 0.00 0.00 0.00 3.79
414 415 0.679505 GCCATGTCCGGTCTATGCTA 59.320 55.000 0.00 0.00 0.00 3.49
415 416 1.276421 GCCATGTCCGGTCTATGCTAT 59.724 52.381 0.00 0.00 0.00 2.97
416 417 2.496070 GCCATGTCCGGTCTATGCTATA 59.504 50.000 0.00 0.00 0.00 1.31
417 418 3.133003 GCCATGTCCGGTCTATGCTATAT 59.867 47.826 0.00 0.00 0.00 0.86
418 419 4.383118 GCCATGTCCGGTCTATGCTATATT 60.383 45.833 0.00 0.00 0.00 1.28
419 420 5.734720 CCATGTCCGGTCTATGCTATATTT 58.265 41.667 0.00 0.00 0.00 1.40
420 421 6.629515 GCCATGTCCGGTCTATGCTATATTTA 60.630 42.308 0.00 0.00 0.00 1.40
421 422 6.980978 CCATGTCCGGTCTATGCTATATTTAG 59.019 42.308 0.00 0.00 0.00 1.85
422 423 7.363880 CCATGTCCGGTCTATGCTATATTTAGT 60.364 40.741 0.00 0.00 0.00 2.24
423 424 7.534723 TGTCCGGTCTATGCTATATTTAGTT 57.465 36.000 0.00 0.00 0.00 2.24
424 425 7.959175 TGTCCGGTCTATGCTATATTTAGTTT 58.041 34.615 0.00 0.00 0.00 2.66
425 426 7.870954 TGTCCGGTCTATGCTATATTTAGTTTG 59.129 37.037 0.00 0.00 0.00 2.93
426 427 8.086522 GTCCGGTCTATGCTATATTTAGTTTGA 58.913 37.037 0.00 0.00 0.00 2.69
427 428 8.812972 TCCGGTCTATGCTATATTTAGTTTGAT 58.187 33.333 0.00 0.00 0.00 2.57
428 429 9.088512 CCGGTCTATGCTATATTTAGTTTGATC 57.911 37.037 0.00 0.00 0.00 2.92
429 430 9.639601 CGGTCTATGCTATATTTAGTTTGATCA 57.360 33.333 0.00 0.00 0.00 2.92
435 436 8.710835 TGCTATATTTAGTTTGATCACGTTGA 57.289 30.769 0.00 0.00 0.00 3.18
436 437 9.157104 TGCTATATTTAGTTTGATCACGTTGAA 57.843 29.630 0.00 0.00 0.00 2.69
440 441 5.621197 TTAGTTTGATCACGTTGAATGGG 57.379 39.130 0.00 0.00 0.00 4.00
441 442 2.228822 AGTTTGATCACGTTGAATGGGC 59.771 45.455 0.00 0.00 0.00 5.36
442 443 2.198827 TTGATCACGTTGAATGGGCT 57.801 45.000 0.00 0.00 0.00 5.19
443 444 2.198827 TGATCACGTTGAATGGGCTT 57.801 45.000 0.00 0.00 0.00 4.35
444 445 1.811965 TGATCACGTTGAATGGGCTTG 59.188 47.619 0.00 0.00 0.00 4.01
445 446 0.527565 ATCACGTTGAATGGGCTTGC 59.472 50.000 0.00 0.00 0.00 4.01
446 447 0.821301 TCACGTTGAATGGGCTTGCA 60.821 50.000 0.00 0.00 0.00 4.08
447 448 0.244450 CACGTTGAATGGGCTTGCAT 59.756 50.000 0.00 0.00 0.00 3.96
448 449 0.244450 ACGTTGAATGGGCTTGCATG 59.756 50.000 0.00 0.00 0.00 4.06
449 450 0.458889 CGTTGAATGGGCTTGCATGG 60.459 55.000 1.34 0.00 0.00 3.66
450 451 0.896923 GTTGAATGGGCTTGCATGGA 59.103 50.000 1.34 0.00 0.00 3.41
451 452 1.483415 GTTGAATGGGCTTGCATGGAT 59.517 47.619 1.34 0.00 0.00 3.41
452 453 1.868713 TGAATGGGCTTGCATGGATT 58.131 45.000 1.34 0.00 0.00 3.01
453 454 2.189676 TGAATGGGCTTGCATGGATTT 58.810 42.857 1.34 0.00 0.00 2.17
454 455 2.093394 TGAATGGGCTTGCATGGATTTG 60.093 45.455 1.34 0.00 0.00 2.32
455 456 0.834612 ATGGGCTTGCATGGATTTGG 59.165 50.000 1.34 0.00 0.00 3.28
456 457 0.252148 TGGGCTTGCATGGATTTGGA 60.252 50.000 1.34 0.00 0.00 3.53
457 458 0.903942 GGGCTTGCATGGATTTGGAA 59.096 50.000 1.34 0.00 0.00 3.53
458 459 1.134610 GGGCTTGCATGGATTTGGAAG 60.135 52.381 1.34 1.86 44.95 3.46
459 460 1.551883 GGCTTGCATGGATTTGGAAGT 59.448 47.619 7.39 0.00 44.26 3.01
460 461 2.027837 GGCTTGCATGGATTTGGAAGTT 60.028 45.455 7.39 0.00 44.26 2.66
461 462 3.256558 GCTTGCATGGATTTGGAAGTTC 58.743 45.455 7.39 0.00 44.26 3.01
462 463 3.306225 GCTTGCATGGATTTGGAAGTTCA 60.306 43.478 5.01 0.00 44.26 3.18
463 464 4.491676 CTTGCATGGATTTGGAAGTTCAG 58.508 43.478 5.01 0.00 39.43 3.02
464 465 3.765381 TGCATGGATTTGGAAGTTCAGA 58.235 40.909 5.01 0.00 0.00 3.27
465 466 3.507233 TGCATGGATTTGGAAGTTCAGAC 59.493 43.478 5.01 0.00 0.00 3.51
466 467 3.426695 GCATGGATTTGGAAGTTCAGACG 60.427 47.826 5.01 0.00 0.00 4.18
467 468 3.485463 TGGATTTGGAAGTTCAGACGT 57.515 42.857 5.01 0.00 0.00 4.34
468 469 3.138304 TGGATTTGGAAGTTCAGACGTG 58.862 45.455 5.01 0.00 0.00 4.49
469 470 3.181459 TGGATTTGGAAGTTCAGACGTGA 60.181 43.478 5.01 0.00 0.00 4.35
470 471 3.433615 GGATTTGGAAGTTCAGACGTGAG 59.566 47.826 5.01 0.00 32.98 3.51
471 472 3.812156 TTTGGAAGTTCAGACGTGAGA 57.188 42.857 5.01 0.00 32.98 3.27
472 473 3.371102 TTGGAAGTTCAGACGTGAGAG 57.629 47.619 5.01 0.00 32.98 3.20
473 474 1.613925 TGGAAGTTCAGACGTGAGAGG 59.386 52.381 5.01 0.00 32.98 3.69
474 475 1.887198 GGAAGTTCAGACGTGAGAGGA 59.113 52.381 5.01 0.00 32.98 3.71
475 476 2.296471 GGAAGTTCAGACGTGAGAGGAA 59.704 50.000 5.01 0.00 32.98 3.36
476 477 3.570559 GAAGTTCAGACGTGAGAGGAAG 58.429 50.000 0.00 0.00 32.98 3.46
477 478 1.889829 AGTTCAGACGTGAGAGGAAGG 59.110 52.381 0.00 0.00 32.98 3.46
478 479 0.603569 TTCAGACGTGAGAGGAAGGC 59.396 55.000 0.00 0.00 32.98 4.35
479 480 0.251386 TCAGACGTGAGAGGAAGGCT 60.251 55.000 0.00 0.00 0.00 4.58
480 481 0.108898 CAGACGTGAGAGGAAGGCTG 60.109 60.000 0.00 0.00 0.00 4.85
481 482 1.446966 GACGTGAGAGGAAGGCTGC 60.447 63.158 0.00 0.00 0.00 5.25
482 483 2.159819 GACGTGAGAGGAAGGCTGCA 62.160 60.000 0.50 0.00 0.00 4.41
483 484 1.220206 CGTGAGAGGAAGGCTGCAT 59.780 57.895 0.50 0.00 0.00 3.96
484 485 0.461548 CGTGAGAGGAAGGCTGCATA 59.538 55.000 0.50 0.00 0.00 3.14
485 486 1.804372 CGTGAGAGGAAGGCTGCATAC 60.804 57.143 0.50 0.00 0.00 2.39
486 487 0.461548 TGAGAGGAAGGCTGCATACG 59.538 55.000 0.50 0.00 0.00 3.06
487 488 0.878086 GAGAGGAAGGCTGCATACGC 60.878 60.000 0.50 0.00 39.24 4.42
488 489 2.202932 AGGAAGGCTGCATACGCG 60.203 61.111 3.53 3.53 42.97 6.01
489 490 2.202878 GGAAGGCTGCATACGCGA 60.203 61.111 15.93 0.00 42.97 5.87
490 491 1.813753 GGAAGGCTGCATACGCGAA 60.814 57.895 15.93 0.00 42.97 4.70
491 492 1.638467 GAAGGCTGCATACGCGAAG 59.362 57.895 15.93 2.43 42.97 3.79
492 493 0.806102 GAAGGCTGCATACGCGAAGA 60.806 55.000 15.93 0.00 42.97 2.87
493 494 0.391130 AAGGCTGCATACGCGAAGAA 60.391 50.000 15.93 0.00 42.97 2.52
494 495 0.391130 AGGCTGCATACGCGAAGAAA 60.391 50.000 15.93 0.00 42.97 2.52
495 496 0.657840 GGCTGCATACGCGAAGAAAT 59.342 50.000 15.93 0.00 42.97 2.17
496 497 1.595489 GGCTGCATACGCGAAGAAATG 60.595 52.381 15.93 9.30 42.97 2.32
497 498 1.327460 GCTGCATACGCGAAGAAATGA 59.673 47.619 15.93 0.00 42.97 2.57
498 499 2.598439 GCTGCATACGCGAAGAAATGAG 60.598 50.000 15.93 8.58 42.97 2.90
499 500 2.860136 CTGCATACGCGAAGAAATGAGA 59.140 45.455 15.93 0.00 42.97 3.27
500 501 2.860136 TGCATACGCGAAGAAATGAGAG 59.140 45.455 15.93 0.00 42.97 3.20
501 502 3.116300 GCATACGCGAAGAAATGAGAGA 58.884 45.455 15.93 0.00 0.00 3.10
502 503 3.738282 GCATACGCGAAGAAATGAGAGAT 59.262 43.478 15.93 0.00 0.00 2.75
503 504 4.375807 GCATACGCGAAGAAATGAGAGATG 60.376 45.833 15.93 0.00 0.00 2.90
504 505 3.510388 ACGCGAAGAAATGAGAGATGA 57.490 42.857 15.93 0.00 0.00 2.92
505 506 3.443037 ACGCGAAGAAATGAGAGATGAG 58.557 45.455 15.93 0.00 0.00 2.90
506 507 2.218302 CGCGAAGAAATGAGAGATGAGC 59.782 50.000 0.00 0.00 0.00 4.26
507 508 2.218302 GCGAAGAAATGAGAGATGAGCG 59.782 50.000 0.00 0.00 0.00 5.03
508 509 3.443037 CGAAGAAATGAGAGATGAGCGT 58.557 45.455 0.00 0.00 0.00 5.07
509 510 3.242480 CGAAGAAATGAGAGATGAGCGTG 59.758 47.826 0.00 0.00 0.00 5.34
510 511 2.548875 AGAAATGAGAGATGAGCGTGC 58.451 47.619 0.00 0.00 0.00 5.34
511 512 2.093816 AGAAATGAGAGATGAGCGTGCA 60.094 45.455 0.00 0.00 0.00 4.57
512 513 1.649664 AATGAGAGATGAGCGTGCAC 58.350 50.000 6.82 6.82 0.00 4.57
513 514 0.822811 ATGAGAGATGAGCGTGCACT 59.177 50.000 16.19 0.00 0.00 4.40
514 515 0.108945 TGAGAGATGAGCGTGCACTG 60.109 55.000 16.19 9.73 0.00 3.66
515 516 0.108898 GAGAGATGAGCGTGCACTGT 60.109 55.000 16.19 0.65 0.00 3.55
516 517 1.133216 GAGAGATGAGCGTGCACTGTA 59.867 52.381 16.19 0.00 0.00 2.74
517 518 1.133982 AGAGATGAGCGTGCACTGTAG 59.866 52.381 16.19 0.00 0.00 2.74
518 519 1.133216 GAGATGAGCGTGCACTGTAGA 59.867 52.381 16.19 0.00 0.00 2.59
519 520 1.135257 AGATGAGCGTGCACTGTAGAC 60.135 52.381 16.19 2.72 0.00 2.59
520 521 0.456824 ATGAGCGTGCACTGTAGACG 60.457 55.000 16.19 0.08 36.18 4.18
523 524 3.755404 CGTGCACTGTAGACGCTC 58.245 61.111 16.19 0.00 0.00 5.03
524 525 1.210413 CGTGCACTGTAGACGCTCT 59.790 57.895 16.19 0.00 0.00 4.09
525 526 0.446616 CGTGCACTGTAGACGCTCTA 59.553 55.000 16.19 0.00 0.00 2.43
600 608 4.436998 CCGGAGCTCGACACCCAC 62.437 72.222 7.83 0.00 42.43 4.61
601 609 4.778415 CGGAGCTCGACACCCACG 62.778 72.222 7.83 0.00 42.43 4.94
603 611 4.357947 GAGCTCGACACCCACGCA 62.358 66.667 0.00 0.00 0.00 5.24
620 628 1.841663 GCATGCACGGACGTCACTTT 61.842 55.000 18.91 0.00 0.00 2.66
633 642 1.154525 CACTTTCTCTTGCGCTGCG 60.155 57.895 19.17 19.17 0.00 5.18
635 644 0.319555 ACTTTCTCTTGCGCTGCGTA 60.320 50.000 24.04 17.28 0.00 4.42
666 675 2.622436 GGTGACGAGGATCCAGAAAAG 58.378 52.381 15.82 0.65 0.00 2.27
667 676 2.622436 GTGACGAGGATCCAGAAAAGG 58.378 52.381 15.82 0.00 0.00 3.11
712 722 4.280494 CTGGATACGGCCGGTCGG 62.280 72.222 34.31 15.10 42.51 4.79
734 744 2.229302 GTGGCAGAGTCGTAGATATCCC 59.771 54.545 0.00 0.00 40.67 3.85
966 984 2.283966 ACCCACCAGACTCCTCCG 60.284 66.667 0.00 0.00 0.00 4.63
968 986 2.997315 CCACCAGACTCCTCCGCA 60.997 66.667 0.00 0.00 0.00 5.69
969 987 2.583441 CCACCAGACTCCTCCGCAA 61.583 63.158 0.00 0.00 0.00 4.85
970 988 1.374758 CACCAGACTCCTCCGCAAC 60.375 63.158 0.00 0.00 0.00 4.17
971 989 1.534235 ACCAGACTCCTCCGCAACT 60.534 57.895 0.00 0.00 0.00 3.16
974 992 0.389166 CAGACTCCTCCGCAACTCAC 60.389 60.000 0.00 0.00 0.00 3.51
984 1002 1.287730 CGCAACTCACCTCAGCTCAC 61.288 60.000 0.00 0.00 0.00 3.51
1004 1030 4.400251 CCCTCCCCCACTCTCCGT 62.400 72.222 0.00 0.00 0.00 4.69
1231 1260 1.539388 CCTCGATCGATCTCCTCTTGG 59.461 57.143 19.78 9.05 0.00 3.61
1232 1261 0.955178 TCGATCGATCTCCTCTTGGC 59.045 55.000 22.43 0.00 0.00 4.52
1233 1262 0.958091 CGATCGATCTCCTCTTGGCT 59.042 55.000 22.43 0.00 0.00 4.75
1234 1263 1.068610 CGATCGATCTCCTCTTGGCTC 60.069 57.143 22.43 0.00 0.00 4.70
1235 1264 0.958091 ATCGATCTCCTCTTGGCTCG 59.042 55.000 0.00 0.00 33.71 5.03
1236 1265 0.394488 TCGATCTCCTCTTGGCTCGT 60.394 55.000 0.00 0.00 33.94 4.18
1237 1266 0.248825 CGATCTCCTCTTGGCTCGTG 60.249 60.000 0.00 0.00 0.00 4.35
1238 1267 0.820871 GATCTCCTCTTGGCTCGTGT 59.179 55.000 0.00 0.00 0.00 4.49
1239 1268 0.820871 ATCTCCTCTTGGCTCGTGTC 59.179 55.000 0.00 0.00 0.00 3.67
1240 1269 1.153939 CTCCTCTTGGCTCGTGTCG 60.154 63.158 0.00 0.00 0.00 4.35
1241 1270 1.867919 CTCCTCTTGGCTCGTGTCGT 61.868 60.000 0.00 0.00 0.00 4.34
1242 1271 1.734477 CCTCTTGGCTCGTGTCGTG 60.734 63.158 0.00 0.00 0.00 4.35
1243 1272 1.007271 CTCTTGGCTCGTGTCGTGT 60.007 57.895 0.00 0.00 0.00 4.49
1244 1273 1.278172 CTCTTGGCTCGTGTCGTGTG 61.278 60.000 0.00 0.00 0.00 3.82
1245 1274 2.943345 CTTGGCTCGTGTCGTGTGC 61.943 63.158 0.00 0.00 0.00 4.57
1246 1275 4.961511 TGGCTCGTGTCGTGTGCC 62.962 66.667 12.86 12.86 38.41 5.01
1249 1278 2.253154 CTCGTGTCGTGTGCCGTA 59.747 61.111 0.00 0.00 37.94 4.02
1292 1321 0.314618 TCAAACTGTGGCGCGTACTA 59.685 50.000 8.43 0.00 0.00 1.82
1296 1325 1.097232 ACTGTGGCGCGTACTACATA 58.903 50.000 8.43 0.00 0.00 2.29
1297 1326 1.202222 ACTGTGGCGCGTACTACATAC 60.202 52.381 8.43 0.00 0.00 2.39
1298 1327 1.065102 CTGTGGCGCGTACTACATACT 59.935 52.381 8.43 0.00 0.00 2.12
1299 1328 1.064505 TGTGGCGCGTACTACATACTC 59.935 52.381 8.43 0.00 0.00 2.59
1300 1329 0.664761 TGGCGCGTACTACATACTCC 59.335 55.000 8.43 0.00 0.00 3.85
1305 1334 3.188048 GCGCGTACTACATACTCCAGTAT 59.812 47.826 8.43 0.00 41.58 2.12
1333 1362 0.261109 TGGATGGTTATGGCATGGCA 59.739 50.000 25.52 25.52 0.00 4.92
1334 1363 1.133104 TGGATGGTTATGGCATGGCAT 60.133 47.619 33.85 33.85 0.00 4.40
1335 1364 1.274167 GGATGGTTATGGCATGGCATG 59.726 52.381 37.19 22.99 0.00 4.06
1336 1365 1.274167 GATGGTTATGGCATGGCATGG 59.726 52.381 37.19 10.64 0.00 3.66
1366 1395 6.282930 TCTGAATTTCTGATGATCATACGCA 58.717 36.000 8.54 1.63 0.00 5.24
1644 1710 5.244755 TCGGTCATCAACTGAAATCATTGA 58.755 37.500 9.24 9.24 40.40 2.57
1722 1798 7.678837 TGAAATTCAGCCAAAAGATTACCAAT 58.321 30.769 0.00 0.00 0.00 3.16
1747 1823 4.771590 TGTCAAACATCTGAATTCTGCC 57.228 40.909 7.05 0.00 0.00 4.85
1761 1837 5.045942 TGAATTCTGCCACAGTCTACCATAA 60.046 40.000 7.05 0.00 32.61 1.90
1774 1850 5.104900 AGTCTACCATAATCAAGTGTCACCC 60.105 44.000 0.00 0.00 0.00 4.61
1777 1853 4.934356 ACCATAATCAAGTGTCACCCAAT 58.066 39.130 0.00 0.00 0.00 3.16
1778 1854 4.706476 ACCATAATCAAGTGTCACCCAATG 59.294 41.667 0.00 0.00 0.00 2.82
1779 1855 4.098349 CCATAATCAAGTGTCACCCAATGG 59.902 45.833 0.00 0.00 37.80 3.16
1780 1856 3.524095 AATCAAGTGTCACCCAATGGA 57.476 42.857 0.00 0.00 34.81 3.41
1781 1857 2.566833 TCAAGTGTCACCCAATGGAG 57.433 50.000 0.00 0.00 34.81 3.86
1782 1858 0.883833 CAAGTGTCACCCAATGGAGC 59.116 55.000 0.00 0.00 34.81 4.70
1783 1859 0.773644 AAGTGTCACCCAATGGAGCT 59.226 50.000 0.00 0.00 34.81 4.09
1784 1860 0.326264 AGTGTCACCCAATGGAGCTC 59.674 55.000 4.71 4.71 34.81 4.09
1785 1861 0.326264 GTGTCACCCAATGGAGCTCT 59.674 55.000 14.64 0.00 34.81 4.09
1786 1862 1.555075 GTGTCACCCAATGGAGCTCTA 59.445 52.381 14.64 8.26 34.81 2.43
1787 1863 1.555075 TGTCACCCAATGGAGCTCTAC 59.445 52.381 14.64 0.00 34.81 2.59
1789 1865 2.171448 GTCACCCAATGGAGCTCTACAT 59.829 50.000 14.64 6.66 35.14 2.29
1790 1866 2.435805 TCACCCAATGGAGCTCTACATC 59.564 50.000 14.64 0.00 31.68 3.06
1791 1867 2.171237 CACCCAATGGAGCTCTACATCA 59.829 50.000 14.64 2.55 31.68 3.07
1792 1868 2.437281 ACCCAATGGAGCTCTACATCAG 59.563 50.000 14.64 6.12 31.68 2.90
1793 1869 2.702478 CCCAATGGAGCTCTACATCAGA 59.298 50.000 14.64 0.00 31.68 3.27
1795 1871 4.125703 CCAATGGAGCTCTACATCAGAAC 58.874 47.826 14.64 0.00 31.68 3.01
1796 1872 4.383444 CCAATGGAGCTCTACATCAGAACA 60.383 45.833 14.64 0.00 31.68 3.18
1798 1874 4.662468 TGGAGCTCTACATCAGAACATC 57.338 45.455 14.64 0.00 31.12 3.06
1799 1875 4.285020 TGGAGCTCTACATCAGAACATCT 58.715 43.478 14.64 0.00 31.12 2.90
1802 1878 5.010922 GGAGCTCTACATCAGAACATCTCAT 59.989 44.000 14.64 0.00 31.12 2.90
1803 1879 5.845103 AGCTCTACATCAGAACATCTCATG 58.155 41.667 0.00 0.00 31.12 3.07
1804 1880 4.448395 GCTCTACATCAGAACATCTCATGC 59.552 45.833 0.00 0.00 31.12 4.06
1807 1883 3.946606 ACATCAGAACATCTCATGCACA 58.053 40.909 0.00 0.00 0.00 4.57
1808 1884 3.939592 ACATCAGAACATCTCATGCACAG 59.060 43.478 0.00 0.00 0.00 3.66
1809 1885 2.353323 TCAGAACATCTCATGCACAGC 58.647 47.619 0.00 0.00 0.00 4.40
1812 1888 3.057806 CAGAACATCTCATGCACAGCAAA 60.058 43.478 0.00 0.00 43.62 3.68
1813 1889 3.190744 AGAACATCTCATGCACAGCAAAG 59.809 43.478 0.00 0.00 43.62 2.77
1814 1890 1.201647 ACATCTCATGCACAGCAAAGC 59.798 47.619 0.00 0.00 43.62 3.51
1815 1891 1.472878 CATCTCATGCACAGCAAAGCT 59.527 47.619 0.00 0.00 43.62 3.74
1831 1957 4.856487 GCAAAGCTGTATTATTCGTTTGCA 59.144 37.500 11.03 0.00 44.81 4.08
1833 1959 6.291269 GCAAAGCTGTATTATTCGTTTGCATC 60.291 38.462 11.03 0.00 44.81 3.91
1835 1961 6.683974 AGCTGTATTATTCGTTTGCATCTT 57.316 33.333 0.00 0.00 0.00 2.40
1836 1962 6.719365 AGCTGTATTATTCGTTTGCATCTTC 58.281 36.000 0.00 0.00 0.00 2.87
1840 1966 8.365399 TGTATTATTCGTTTGCATCTTCTAGG 57.635 34.615 0.00 0.00 0.00 3.02
1847 1973 5.884232 TCGTTTGCATCTTCTAGGAGTACTA 59.116 40.000 0.00 0.00 0.00 1.82
1851 1977 8.684520 GTTTGCATCTTCTAGGAGTACTACTAA 58.315 37.037 15.80 3.33 0.00 2.24
1852 1978 8.453238 TTGCATCTTCTAGGAGTACTACTAAG 57.547 38.462 15.80 12.86 0.00 2.18
1854 1980 8.272889 TGCATCTTCTAGGAGTACTACTAAGAA 58.727 37.037 19.70 18.95 34.62 2.52
2050 2240 2.851195 TCCTCTTCCACAGTTTTCAGC 58.149 47.619 0.00 0.00 0.00 4.26
2283 2481 1.216977 CACGTCGGCCACCAATCTA 59.783 57.895 2.24 0.00 0.00 1.98
2432 2630 2.744202 ACATCAAGAAACACGAGCCATC 59.256 45.455 0.00 0.00 0.00 3.51
2437 2635 0.804364 GAAACACGAGCCATCATGCA 59.196 50.000 0.00 0.00 0.00 3.96
2589 2790 0.531200 AGACGCAGGTAAGCTACACC 59.469 55.000 9.01 9.01 36.22 4.16
2590 2791 0.459759 GACGCAGGTAAGCTACACCC 60.460 60.000 12.66 0.00 36.67 4.61
2615 2816 2.284684 CGTGCGTACTGACTAGGAGTAG 59.715 54.545 1.24 2.12 0.00 2.57
2780 2981 2.600769 AAGTCGGACGTGGAGGCT 60.601 61.111 0.00 0.00 0.00 4.58
2789 2990 4.459089 GTGGAGGCTCTGCGGGTC 62.459 72.222 15.23 0.00 0.00 4.46
3111 3312 0.957395 CGCCATGTCCAAGTGAAGCT 60.957 55.000 0.00 0.00 0.00 3.74
3112 3313 1.675714 CGCCATGTCCAAGTGAAGCTA 60.676 52.381 0.00 0.00 0.00 3.32
3113 3314 2.648059 GCCATGTCCAAGTGAAGCTAT 58.352 47.619 0.00 0.00 0.00 2.97
3114 3315 2.357009 GCCATGTCCAAGTGAAGCTATG 59.643 50.000 0.00 0.00 0.00 2.23
3122 3323 2.118313 AGTGAAGCTATGCATGCACA 57.882 45.000 25.37 11.52 31.93 4.57
3182 3387 5.679734 TTGAGCTGATGAAAACTCTTGAC 57.320 39.130 0.00 0.00 0.00 3.18
3235 3440 3.361414 GCGTCAGTCGGTAATAACTCTC 58.639 50.000 0.00 0.00 40.26 3.20
3236 3441 3.065095 GCGTCAGTCGGTAATAACTCTCT 59.935 47.826 0.00 0.00 40.26 3.10
3242 3447 6.030849 CAGTCGGTAATAACTCTCTGTCTTG 58.969 44.000 0.00 0.00 0.00 3.02
3277 3485 7.046033 AGTTATGTAATGGAACTTTCTACCCG 58.954 38.462 0.00 0.00 29.02 5.28
3283 3491 3.716431 TGGAACTTTCTACCCGGAGTAT 58.284 45.455 0.73 0.00 0.00 2.12
3287 3495 4.868314 ACTTTCTACCCGGAGTATATGC 57.132 45.455 0.73 0.00 0.00 3.14
3289 3497 4.838986 ACTTTCTACCCGGAGTATATGCAT 59.161 41.667 0.73 3.79 0.00 3.96
3290 3498 4.801330 TTCTACCCGGAGTATATGCATG 57.199 45.455 10.16 0.00 0.00 4.06
3291 3499 2.496070 TCTACCCGGAGTATATGCATGC 59.504 50.000 11.82 11.82 0.00 4.06
3292 3500 1.352083 ACCCGGAGTATATGCATGCT 58.648 50.000 20.33 7.07 0.00 3.79
3295 3503 3.519510 ACCCGGAGTATATGCATGCTTAT 59.480 43.478 24.48 24.48 0.00 1.73
3297 3505 4.383010 CCCGGAGTATATGCATGCTTATGA 60.383 45.833 27.64 14.06 0.00 2.15
3298 3506 5.363101 CCGGAGTATATGCATGCTTATGAT 58.637 41.667 27.64 18.82 0.00 2.45
3299 3507 5.235831 CCGGAGTATATGCATGCTTATGATG 59.764 44.000 27.64 16.02 0.00 3.07
3300 3508 5.277202 CGGAGTATATGCATGCTTATGATGC 60.277 44.000 27.64 20.76 45.45 3.91
3362 3573 8.391106 GTGGTAAGCTTCATTTACAGATTACAG 58.609 37.037 0.00 0.00 41.60 2.74
3367 3578 5.502544 GCTTCATTTACAGATTACAGACGGC 60.503 44.000 0.00 0.00 0.00 5.68
3395 3607 2.965147 CCCTTCCCGCCATTTCATTTAT 59.035 45.455 0.00 0.00 0.00 1.40
4045 4263 1.078759 CACAGCGACGAGGAACATCC 61.079 60.000 0.00 0.00 36.58 3.51
4046 4264 1.874019 CAGCGACGAGGAACATCCG 60.874 63.158 0.00 0.00 42.75 4.18
4047 4265 2.181021 GCGACGAGGAACATCCGT 59.819 61.111 0.00 0.00 42.75 4.69
4048 4266 1.872679 GCGACGAGGAACATCCGTC 60.873 63.158 0.00 0.00 46.27 4.79
4079 4297 4.147322 GCGGCGTCACCATTGTCG 62.147 66.667 9.37 0.00 39.03 4.35
4105 4323 1.548973 CCGATCGAGCACGCCATAAC 61.549 60.000 18.66 0.00 39.58 1.89
4111 4329 3.462982 TCGAGCACGCCATAACAAATAT 58.537 40.909 0.00 0.00 39.58 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.190849 CTGACATGGTGGCGAGCG 61.191 66.667 0.00 0.00 0.00 5.03
2 3 2.103042 GTCTGACATGGTGGCGAGC 61.103 63.158 2.24 0.00 0.00 5.03
3 4 0.459237 GAGTCTGACATGGTGGCGAG 60.459 60.000 10.88 0.00 0.00 5.03
4 5 1.184970 TGAGTCTGACATGGTGGCGA 61.185 55.000 10.88 0.00 0.00 5.54
6 7 1.271054 ACTTGAGTCTGACATGGTGGC 60.271 52.381 10.88 0.00 0.00 5.01
8 9 3.070018 GGAACTTGAGTCTGACATGGTG 58.930 50.000 10.88 0.00 0.00 4.17
9 10 2.289072 CGGAACTTGAGTCTGACATGGT 60.289 50.000 10.88 0.70 0.00 3.55
10 11 2.341257 CGGAACTTGAGTCTGACATGG 58.659 52.381 10.88 0.09 0.00 3.66
11 12 1.728971 GCGGAACTTGAGTCTGACATG 59.271 52.381 10.88 0.00 0.00 3.21
12 13 1.338200 GGCGGAACTTGAGTCTGACAT 60.338 52.381 10.88 0.00 0.00 3.06
13 14 0.033504 GGCGGAACTTGAGTCTGACA 59.966 55.000 10.88 0.00 0.00 3.58
14 15 0.670854 GGGCGGAACTTGAGTCTGAC 60.671 60.000 0.00 0.00 0.00 3.51
15 16 0.832135 AGGGCGGAACTTGAGTCTGA 60.832 55.000 0.00 0.00 0.00 3.27
16 17 0.671781 CAGGGCGGAACTTGAGTCTG 60.672 60.000 0.00 0.00 0.00 3.51
17 18 1.674057 CAGGGCGGAACTTGAGTCT 59.326 57.895 0.00 0.00 0.00 3.24
18 19 1.376037 CCAGGGCGGAACTTGAGTC 60.376 63.158 0.00 0.00 36.56 3.36
19 20 1.841556 TCCAGGGCGGAACTTGAGT 60.842 57.895 0.00 0.00 42.52 3.41
20 21 3.068881 TCCAGGGCGGAACTTGAG 58.931 61.111 0.00 0.00 42.52 3.02
31 32 0.321122 GAGCTATTCGCCATCCAGGG 60.321 60.000 0.00 0.00 40.39 4.45
32 33 0.668706 CGAGCTATTCGCCATCCAGG 60.669 60.000 0.00 0.00 43.22 4.45
33 34 2.819667 CGAGCTATTCGCCATCCAG 58.180 57.895 0.00 0.00 43.22 3.86
42 43 3.619038 GCAATATGTAGGGCGAGCTATTC 59.381 47.826 0.00 0.00 0.00 1.75
43 44 3.600388 GCAATATGTAGGGCGAGCTATT 58.400 45.455 0.00 0.00 0.00 1.73
44 45 2.093447 GGCAATATGTAGGGCGAGCTAT 60.093 50.000 0.00 0.00 0.00 2.97
45 46 1.275291 GGCAATATGTAGGGCGAGCTA 59.725 52.381 0.00 0.00 0.00 3.32
46 47 0.035458 GGCAATATGTAGGGCGAGCT 59.965 55.000 0.00 0.00 0.00 4.09
47 48 0.955919 GGGCAATATGTAGGGCGAGC 60.956 60.000 0.00 0.00 0.00 5.03
48 49 0.687354 AGGGCAATATGTAGGGCGAG 59.313 55.000 0.00 0.00 0.00 5.03
49 50 0.685097 GAGGGCAATATGTAGGGCGA 59.315 55.000 0.00 0.00 0.00 5.54
50 51 0.321653 GGAGGGCAATATGTAGGGCG 60.322 60.000 0.00 0.00 0.00 6.13
51 52 0.321653 CGGAGGGCAATATGTAGGGC 60.322 60.000 0.00 0.00 0.00 5.19
52 53 1.002087 GACGGAGGGCAATATGTAGGG 59.998 57.143 0.00 0.00 0.00 3.53
53 54 1.336887 CGACGGAGGGCAATATGTAGG 60.337 57.143 0.00 0.00 0.00 3.18
54 55 1.336887 CCGACGGAGGGCAATATGTAG 60.337 57.143 8.64 0.00 0.00 2.74
55 56 0.677288 CCGACGGAGGGCAATATGTA 59.323 55.000 8.64 0.00 0.00 2.29
56 57 1.335132 ACCGACGGAGGGCAATATGT 61.335 55.000 23.38 0.00 35.02 2.29
57 58 0.600255 GACCGACGGAGGGCAATATG 60.600 60.000 23.38 0.00 39.73 1.78
58 59 1.746517 GACCGACGGAGGGCAATAT 59.253 57.895 23.38 0.00 39.73 1.28
59 60 2.777972 CGACCGACGGAGGGCAATA 61.778 63.158 23.38 0.00 40.05 1.90
60 61 4.143333 CGACCGACGGAGGGCAAT 62.143 66.667 23.38 0.00 40.05 3.56
70 71 1.269621 CCCTATCCATTCACGACCGAC 60.270 57.143 0.00 0.00 0.00 4.79
71 72 1.037493 CCCTATCCATTCACGACCGA 58.963 55.000 0.00 0.00 0.00 4.69
72 73 0.033504 CCCCTATCCATTCACGACCG 59.966 60.000 0.00 0.00 0.00 4.79
73 74 0.250338 GCCCCTATCCATTCACGACC 60.250 60.000 0.00 0.00 0.00 4.79
74 75 0.600255 CGCCCCTATCCATTCACGAC 60.600 60.000 0.00 0.00 0.00 4.34
75 76 1.745890 CGCCCCTATCCATTCACGA 59.254 57.895 0.00 0.00 0.00 4.35
76 77 1.301716 CCGCCCCTATCCATTCACG 60.302 63.158 0.00 0.00 0.00 4.35
77 78 1.600916 GCCGCCCCTATCCATTCAC 60.601 63.158 0.00 0.00 0.00 3.18
78 79 2.075566 TGCCGCCCCTATCCATTCA 61.076 57.895 0.00 0.00 0.00 2.57
79 80 1.600916 GTGCCGCCCCTATCCATTC 60.601 63.158 0.00 0.00 0.00 2.67
80 81 2.515901 GTGCCGCCCCTATCCATT 59.484 61.111 0.00 0.00 0.00 3.16
81 82 3.941188 CGTGCCGCCCCTATCCAT 61.941 66.667 0.00 0.00 0.00 3.41
83 84 4.603946 GACGTGCCGCCCCTATCC 62.604 72.222 0.00 0.00 0.00 2.59
84 85 3.379865 TTGACGTGCCGCCCCTATC 62.380 63.158 0.00 0.00 0.00 2.08
85 86 3.385749 CTTGACGTGCCGCCCCTAT 62.386 63.158 0.00 0.00 0.00 2.57
86 87 4.077184 CTTGACGTGCCGCCCCTA 62.077 66.667 0.00 0.00 0.00 3.53
88 89 3.887335 TAACTTGACGTGCCGCCCC 62.887 63.158 0.00 0.00 0.00 5.80
89 90 1.743995 ATAACTTGACGTGCCGCCC 60.744 57.895 0.00 0.00 0.00 6.13
90 91 1.017177 TCATAACTTGACGTGCCGCC 61.017 55.000 0.00 0.00 0.00 6.13
91 92 0.370273 CTCATAACTTGACGTGCCGC 59.630 55.000 0.00 0.00 0.00 6.53
92 93 0.370273 GCTCATAACTTGACGTGCCG 59.630 55.000 0.00 0.00 0.00 5.69
93 94 1.661112 GAGCTCATAACTTGACGTGCC 59.339 52.381 9.40 0.00 0.00 5.01
94 95 2.600867 GAGAGCTCATAACTTGACGTGC 59.399 50.000 17.77 0.00 0.00 5.34
95 96 3.182967 GGAGAGCTCATAACTTGACGTG 58.817 50.000 17.77 0.00 0.00 4.49
96 97 2.166664 GGGAGAGCTCATAACTTGACGT 59.833 50.000 17.77 0.00 0.00 4.34
97 98 2.428890 AGGGAGAGCTCATAACTTGACG 59.571 50.000 17.77 0.00 0.00 4.35
98 99 3.431486 CCAGGGAGAGCTCATAACTTGAC 60.431 52.174 17.77 0.00 0.00 3.18
99 100 2.768527 CCAGGGAGAGCTCATAACTTGA 59.231 50.000 17.77 0.00 0.00 3.02
100 101 2.503356 ACCAGGGAGAGCTCATAACTTG 59.497 50.000 17.77 9.01 0.00 3.16
101 102 2.839228 ACCAGGGAGAGCTCATAACTT 58.161 47.619 17.77 0.00 0.00 2.66
102 103 2.559381 ACCAGGGAGAGCTCATAACT 57.441 50.000 17.77 5.45 0.00 2.24
103 104 2.630580 CCTACCAGGGAGAGCTCATAAC 59.369 54.545 17.77 2.98 0.00 1.89
104 105 2.964209 CCTACCAGGGAGAGCTCATAA 58.036 52.381 17.77 0.00 0.00 1.90
105 106 1.481428 GCCTACCAGGGAGAGCTCATA 60.481 57.143 17.77 0.00 35.37 2.15
106 107 0.762461 GCCTACCAGGGAGAGCTCAT 60.762 60.000 17.77 0.29 35.37 2.90
107 108 1.381872 GCCTACCAGGGAGAGCTCA 60.382 63.158 17.77 0.00 35.37 4.26
108 109 2.137528 GGCCTACCAGGGAGAGCTC 61.138 68.421 5.27 5.27 35.37 4.09
109 110 2.041405 GGCCTACCAGGGAGAGCT 60.041 66.667 0.00 0.00 35.37 4.09
110 111 3.541713 CGGCCTACCAGGGAGAGC 61.542 72.222 0.00 1.47 35.37 4.09
111 112 1.381327 TTCGGCCTACCAGGGAGAG 60.381 63.158 0.00 0.00 35.37 3.20
112 113 1.381327 CTTCGGCCTACCAGGGAGA 60.381 63.158 0.00 0.00 35.37 3.71
113 114 2.435693 CCTTCGGCCTACCAGGGAG 61.436 68.421 0.00 0.00 35.37 4.30
114 115 2.365105 CCTTCGGCCTACCAGGGA 60.365 66.667 0.00 0.00 35.37 4.20
115 116 3.480133 CCCTTCGGCCTACCAGGG 61.480 72.222 10.19 10.19 41.65 4.45
116 117 3.480133 CCCCTTCGGCCTACCAGG 61.480 72.222 0.00 0.00 38.80 4.45
125 126 2.409870 GCATGAGTTGCCCCTTCGG 61.410 63.158 0.00 0.00 46.15 4.30
126 127 3.190878 GCATGAGTTGCCCCTTCG 58.809 61.111 0.00 0.00 46.15 3.79
134 135 0.390866 AGGACGCAGAGCATGAGTTG 60.391 55.000 0.00 0.00 42.55 3.16
135 136 0.108424 GAGGACGCAGAGCATGAGTT 60.108 55.000 0.00 0.00 42.55 3.01
136 137 1.515020 GAGGACGCAGAGCATGAGT 59.485 57.895 0.00 0.00 45.48 3.41
137 138 1.227205 GGAGGACGCAGAGCATGAG 60.227 63.158 0.00 0.00 34.41 2.90
138 139 2.725312 GGGAGGACGCAGAGCATGA 61.725 63.158 0.00 0.00 0.00 3.07
139 140 2.202987 GGGAGGACGCAGAGCATG 60.203 66.667 0.00 0.00 0.00 4.06
140 141 3.474570 GGGGAGGACGCAGAGCAT 61.475 66.667 0.00 0.00 0.00 3.79
141 142 4.704103 AGGGGAGGACGCAGAGCA 62.704 66.667 0.00 0.00 33.80 4.26
142 143 4.154347 CAGGGGAGGACGCAGAGC 62.154 72.222 0.00 0.00 33.80 4.09
143 144 3.465403 CCAGGGGAGGACGCAGAG 61.465 72.222 0.00 0.00 33.80 3.35
144 145 3.965026 CTCCAGGGGAGGACGCAGA 62.965 68.421 4.31 0.00 45.43 4.26
145 146 3.465403 CTCCAGGGGAGGACGCAG 61.465 72.222 4.31 0.00 45.43 5.18
155 156 3.847602 CTGCTCGCCTCTCCAGGG 61.848 72.222 0.00 0.00 40.75 4.45
156 157 3.073735 ACTGCTCGCCTCTCCAGG 61.074 66.667 0.00 0.00 43.82 4.45
157 158 2.183811 CACTGCTCGCCTCTCCAG 59.816 66.667 0.00 0.00 0.00 3.86
158 159 3.385384 CCACTGCTCGCCTCTCCA 61.385 66.667 0.00 0.00 0.00 3.86
159 160 4.828925 GCCACTGCTCGCCTCTCC 62.829 72.222 0.00 0.00 33.53 3.71
169 170 0.036388 TTGGTGCTACTAGCCACTGC 60.036 55.000 5.58 0.00 41.51 4.40
170 171 2.076863 GTTTGGTGCTACTAGCCACTG 58.923 52.381 5.58 0.00 41.51 3.66
171 172 1.697432 TGTTTGGTGCTACTAGCCACT 59.303 47.619 5.58 0.00 41.51 4.00
172 173 1.804748 GTGTTTGGTGCTACTAGCCAC 59.195 52.381 5.58 4.28 41.51 5.01
173 174 1.271163 GGTGTTTGGTGCTACTAGCCA 60.271 52.381 5.58 0.00 41.51 4.75
174 175 1.003233 AGGTGTTTGGTGCTACTAGCC 59.997 52.381 5.58 0.00 41.51 3.93
175 176 2.347731 GAGGTGTTTGGTGCTACTAGC 58.652 52.381 0.61 0.61 42.82 3.42
176 177 2.301870 TGGAGGTGTTTGGTGCTACTAG 59.698 50.000 0.00 0.00 0.00 2.57
177 178 2.331166 TGGAGGTGTTTGGTGCTACTA 58.669 47.619 0.00 0.00 0.00 1.82
178 179 1.136828 TGGAGGTGTTTGGTGCTACT 58.863 50.000 0.00 0.00 0.00 2.57
179 180 1.975660 TTGGAGGTGTTTGGTGCTAC 58.024 50.000 0.00 0.00 0.00 3.58
180 181 2.303175 GTTTGGAGGTGTTTGGTGCTA 58.697 47.619 0.00 0.00 0.00 3.49
181 182 1.111277 GTTTGGAGGTGTTTGGTGCT 58.889 50.000 0.00 0.00 0.00 4.40
182 183 0.104120 GGTTTGGAGGTGTTTGGTGC 59.896 55.000 0.00 0.00 0.00 5.01
183 184 0.750249 GGGTTTGGAGGTGTTTGGTG 59.250 55.000 0.00 0.00 0.00 4.17
184 185 0.634465 AGGGTTTGGAGGTGTTTGGT 59.366 50.000 0.00 0.00 0.00 3.67
185 186 1.039856 CAGGGTTTGGAGGTGTTTGG 58.960 55.000 0.00 0.00 0.00 3.28
186 187 0.389025 GCAGGGTTTGGAGGTGTTTG 59.611 55.000 0.00 0.00 0.00 2.93
187 188 0.261696 AGCAGGGTTTGGAGGTGTTT 59.738 50.000 0.00 0.00 0.00 2.83
188 189 0.178990 GAGCAGGGTTTGGAGGTGTT 60.179 55.000 0.00 0.00 0.00 3.32
189 190 1.352622 TGAGCAGGGTTTGGAGGTGT 61.353 55.000 0.00 0.00 0.00 4.16
190 191 0.038744 ATGAGCAGGGTTTGGAGGTG 59.961 55.000 0.00 0.00 0.00 4.00
191 192 0.329596 GATGAGCAGGGTTTGGAGGT 59.670 55.000 0.00 0.00 0.00 3.85
192 193 0.394899 GGATGAGCAGGGTTTGGAGG 60.395 60.000 0.00 0.00 0.00 4.30
193 194 0.394899 GGGATGAGCAGGGTTTGGAG 60.395 60.000 0.00 0.00 0.00 3.86
194 195 1.691219 GGGATGAGCAGGGTTTGGA 59.309 57.895 0.00 0.00 0.00 3.53
195 196 1.750399 CGGGATGAGCAGGGTTTGG 60.750 63.158 0.00 0.00 0.00 3.28
196 197 1.750399 CCGGGATGAGCAGGGTTTG 60.750 63.158 0.00 0.00 0.00 2.93
197 198 1.281925 ATCCGGGATGAGCAGGGTTT 61.282 55.000 9.17 0.00 0.00 3.27
198 199 1.694169 ATCCGGGATGAGCAGGGTT 60.694 57.895 9.17 0.00 0.00 4.11
199 200 2.040464 ATCCGGGATGAGCAGGGT 60.040 61.111 9.17 0.00 0.00 4.34
200 201 2.142761 TCATCCGGGATGAGCAGGG 61.143 63.158 31.00 8.59 43.11 4.45
201 202 3.554716 TCATCCGGGATGAGCAGG 58.445 61.111 31.00 9.29 43.11 4.85
206 207 0.973496 TCCAACGTCATCCGGGATGA 60.973 55.000 31.00 31.00 45.35 2.92
207 208 0.106708 ATCCAACGTCATCCGGGATG 59.893 55.000 27.60 27.60 42.24 3.51
208 209 0.106708 CATCCAACGTCATCCGGGAT 59.893 55.000 2.97 2.97 42.24 3.85
209 210 1.520192 CATCCAACGTCATCCGGGA 59.480 57.895 0.00 0.00 42.24 5.14
210 211 2.180204 GCATCCAACGTCATCCGGG 61.180 63.158 0.00 0.00 42.24 5.73
211 212 1.153369 AGCATCCAACGTCATCCGG 60.153 57.895 0.00 0.00 42.24 5.14
212 213 0.460109 TGAGCATCCAACGTCATCCG 60.460 55.000 0.00 0.00 44.03 4.18
213 214 1.600957 CATGAGCATCCAACGTCATCC 59.399 52.381 0.00 0.00 0.00 3.51
214 215 1.003116 GCATGAGCATCCAACGTCATC 60.003 52.381 0.00 0.00 41.58 2.92
215 216 1.019673 GCATGAGCATCCAACGTCAT 58.980 50.000 0.00 0.00 41.58 3.06
216 217 1.026182 GGCATGAGCATCCAACGTCA 61.026 55.000 0.00 0.00 44.61 4.35
217 218 0.745845 AGGCATGAGCATCCAACGTC 60.746 55.000 0.00 0.00 44.61 4.34
218 219 1.028330 CAGGCATGAGCATCCAACGT 61.028 55.000 0.00 0.00 44.61 3.99
219 220 1.725665 CAGGCATGAGCATCCAACG 59.274 57.895 0.00 0.00 44.61 4.10
220 221 1.317431 TGCAGGCATGAGCATCCAAC 61.317 55.000 0.62 0.00 44.61 3.77
221 222 1.000646 TGCAGGCATGAGCATCCAA 60.001 52.632 0.62 0.00 44.61 3.53
222 223 2.678470 TGCAGGCATGAGCATCCA 59.322 55.556 0.62 0.00 44.61 3.41
226 227 1.096967 CGGTTATGCAGGCATGAGCA 61.097 55.000 22.35 9.79 45.92 4.26
227 228 0.815213 TCGGTTATGCAGGCATGAGC 60.815 55.000 16.61 16.05 37.82 4.26
228 229 1.224075 CTCGGTTATGCAGGCATGAG 58.776 55.000 16.61 10.32 37.82 2.90
229 230 0.541392 ACTCGGTTATGCAGGCATGA 59.459 50.000 16.61 5.80 37.82 3.07
230 231 2.238942 TACTCGGTTATGCAGGCATG 57.761 50.000 16.61 0.00 37.82 4.06
231 232 3.492102 ATTACTCGGTTATGCAGGCAT 57.508 42.857 11.94 11.94 40.19 4.40
232 233 3.244078 CCTATTACTCGGTTATGCAGGCA 60.244 47.826 0.00 0.00 0.00 4.75
233 234 3.326747 CCTATTACTCGGTTATGCAGGC 58.673 50.000 0.00 0.00 0.00 4.85
234 235 3.326747 GCCTATTACTCGGTTATGCAGG 58.673 50.000 0.00 0.00 0.00 4.85
235 236 2.987149 CGCCTATTACTCGGTTATGCAG 59.013 50.000 0.00 0.00 0.00 4.41
236 237 2.864882 GCGCCTATTACTCGGTTATGCA 60.865 50.000 0.00 0.00 0.00 3.96
237 238 1.725164 GCGCCTATTACTCGGTTATGC 59.275 52.381 0.00 0.00 0.00 3.14
238 239 1.983605 CGCGCCTATTACTCGGTTATG 59.016 52.381 0.00 0.00 0.00 1.90
239 240 1.068055 CCGCGCCTATTACTCGGTTAT 60.068 52.381 0.00 0.00 35.75 1.89
240 241 0.311790 CCGCGCCTATTACTCGGTTA 59.688 55.000 0.00 0.00 35.75 2.85
241 242 1.066918 CCGCGCCTATTACTCGGTT 59.933 57.895 0.00 0.00 35.75 4.44
242 243 2.726274 CCGCGCCTATTACTCGGT 59.274 61.111 0.00 0.00 35.75 4.69
243 244 2.049433 CCCGCGCCTATTACTCGG 60.049 66.667 0.00 0.00 39.79 4.63
244 245 2.049433 CCCCGCGCCTATTACTCG 60.049 66.667 0.00 0.00 0.00 4.18
245 246 2.357154 GCCCCGCGCCTATTACTC 60.357 66.667 0.00 0.00 0.00 2.59
263 264 4.717629 TTCCTCGCGCGGTGAGTG 62.718 66.667 31.69 13.61 38.37 3.51
264 265 4.421479 CTTCCTCGCGCGGTGAGT 62.421 66.667 31.69 0.00 38.37 3.41
265 266 3.626680 TTCTTCCTCGCGCGGTGAG 62.627 63.158 31.69 20.00 39.58 3.51
266 267 3.626680 CTTCTTCCTCGCGCGGTGA 62.627 63.158 31.69 23.06 0.00 4.02
267 268 3.181967 CTTCTTCCTCGCGCGGTG 61.182 66.667 31.69 22.11 0.00 4.94
268 269 4.436998 CCTTCTTCCTCGCGCGGT 62.437 66.667 31.69 0.00 0.00 5.68
269 270 4.129737 TCCTTCTTCCTCGCGCGG 62.130 66.667 31.69 20.19 0.00 6.46
270 271 2.580867 CTCCTTCTTCCTCGCGCG 60.581 66.667 26.76 26.76 0.00 6.86
271 272 1.664321 TACCTCCTTCTTCCTCGCGC 61.664 60.000 0.00 0.00 0.00 6.86
272 273 0.382515 CTACCTCCTTCTTCCTCGCG 59.617 60.000 0.00 0.00 0.00 5.87
273 274 0.103390 GCTACCTCCTTCTTCCTCGC 59.897 60.000 0.00 0.00 0.00 5.03
274 275 0.382515 CGCTACCTCCTTCTTCCTCG 59.617 60.000 0.00 0.00 0.00 4.63
275 276 1.765230 TCGCTACCTCCTTCTTCCTC 58.235 55.000 0.00 0.00 0.00 3.71
276 277 2.463047 ATCGCTACCTCCTTCTTCCT 57.537 50.000 0.00 0.00 0.00 3.36
277 278 2.559231 CCTATCGCTACCTCCTTCTTCC 59.441 54.545 0.00 0.00 0.00 3.46
278 279 2.029739 GCCTATCGCTACCTCCTTCTTC 60.030 54.545 0.00 0.00 0.00 2.87
279 280 1.964933 GCCTATCGCTACCTCCTTCTT 59.035 52.381 0.00 0.00 0.00 2.52
280 281 1.623163 GCCTATCGCTACCTCCTTCT 58.377 55.000 0.00 0.00 0.00 2.85
281 282 0.241481 CGCCTATCGCTACCTCCTTC 59.759 60.000 0.00 0.00 34.21 3.46
282 283 1.179814 CCGCCTATCGCTACCTCCTT 61.180 60.000 0.00 0.00 36.73 3.36
283 284 1.604023 CCGCCTATCGCTACCTCCT 60.604 63.158 0.00 0.00 36.73 3.69
284 285 2.963371 CCGCCTATCGCTACCTCC 59.037 66.667 0.00 0.00 36.73 4.30
285 286 2.258897 GCCGCCTATCGCTACCTC 59.741 66.667 0.00 0.00 36.73 3.85
286 287 3.671411 CGCCGCCTATCGCTACCT 61.671 66.667 0.00 0.00 36.73 3.08
287 288 4.719369 CCGCCGCCTATCGCTACC 62.719 72.222 0.00 0.00 36.73 3.18
288 289 3.612371 CTCCGCCGCCTATCGCTAC 62.612 68.421 0.00 0.00 36.73 3.58
289 290 3.362797 CTCCGCCGCCTATCGCTA 61.363 66.667 0.00 0.00 36.73 4.26
291 292 2.600122 CTATCTCCGCCGCCTATCGC 62.600 65.000 0.00 0.00 36.73 4.58
292 293 1.025113 TCTATCTCCGCCGCCTATCG 61.025 60.000 0.00 0.00 38.08 2.92
293 294 0.452585 GTCTATCTCCGCCGCCTATC 59.547 60.000 0.00 0.00 0.00 2.08
294 295 1.306642 CGTCTATCTCCGCCGCCTAT 61.307 60.000 0.00 0.00 0.00 2.57
295 296 1.964891 CGTCTATCTCCGCCGCCTA 60.965 63.158 0.00 0.00 0.00 3.93
296 297 3.288290 CGTCTATCTCCGCCGCCT 61.288 66.667 0.00 0.00 0.00 5.52
297 298 4.344474 CCGTCTATCTCCGCCGCC 62.344 72.222 0.00 0.00 0.00 6.13
299 300 4.344474 GGCCGTCTATCTCCGCCG 62.344 72.222 0.00 0.00 0.00 6.46
300 301 4.344474 CGGCCGTCTATCTCCGCC 62.344 72.222 19.50 0.00 35.20 6.13
302 303 4.344474 GGCGGCCGTCTATCTCCG 62.344 72.222 28.70 0.00 44.29 4.63
303 304 2.423290 GAAGGCGGCCGTCTATCTCC 62.423 65.000 35.78 20.47 0.00 3.71
304 305 1.007154 GAAGGCGGCCGTCTATCTC 60.007 63.158 35.78 23.77 0.00 2.75
305 306 1.327690 TTGAAGGCGGCCGTCTATCT 61.328 55.000 35.78 19.16 33.31 1.98
306 307 1.143183 TTGAAGGCGGCCGTCTATC 59.857 57.895 35.78 29.24 33.31 2.08
307 308 1.153429 GTTGAAGGCGGCCGTCTAT 60.153 57.895 35.78 23.00 33.31 1.98
308 309 2.263540 GTTGAAGGCGGCCGTCTA 59.736 61.111 35.78 16.94 33.31 2.59
309 310 3.936203 TGTTGAAGGCGGCCGTCT 61.936 61.111 30.20 30.20 33.31 4.18
310 311 3.723348 GTGTTGAAGGCGGCCGTC 61.723 66.667 25.39 25.39 32.76 4.79
317 318 0.039527 ATTTTCGCGGTGTTGAAGGC 60.040 50.000 6.13 0.00 0.00 4.35
318 319 1.685302 CATTTTCGCGGTGTTGAAGG 58.315 50.000 6.13 0.00 0.00 3.46
319 320 1.052287 GCATTTTCGCGGTGTTGAAG 58.948 50.000 6.13 0.00 0.00 3.02
320 321 0.318275 GGCATTTTCGCGGTGTTGAA 60.318 50.000 6.13 0.00 0.00 2.69
321 322 1.284408 GGCATTTTCGCGGTGTTGA 59.716 52.632 6.13 0.00 0.00 3.18
322 323 0.596083 TTGGCATTTTCGCGGTGTTG 60.596 50.000 6.13 0.57 0.00 3.33
323 324 0.318614 CTTGGCATTTTCGCGGTGTT 60.319 50.000 6.13 0.00 0.00 3.32
324 325 1.285641 CTTGGCATTTTCGCGGTGT 59.714 52.632 6.13 0.00 0.00 4.16
325 326 1.444212 CCTTGGCATTTTCGCGGTG 60.444 57.895 6.13 1.55 0.00 4.94
326 327 2.961768 CCTTGGCATTTTCGCGGT 59.038 55.556 6.13 0.00 0.00 5.68
327 328 2.506881 GCCTTGGCATTTTCGCGG 60.507 61.111 6.13 0.00 0.00 6.46
328 329 0.737019 AATGCCTTGGCATTTTCGCG 60.737 50.000 28.20 0.00 37.12 5.87
329 330 0.722848 CAATGCCTTGGCATTTTCGC 59.277 50.000 30.44 0.00 38.21 4.70
330 331 0.722848 GCAATGCCTTGGCATTTTCG 59.277 50.000 30.44 22.09 38.21 3.46
331 332 0.722848 CGCAATGCCTTGGCATTTTC 59.277 50.000 30.44 23.71 38.21 2.29
332 333 0.674269 CCGCAATGCCTTGGCATTTT 60.674 50.000 30.44 14.54 38.21 1.82
333 334 1.078988 CCGCAATGCCTTGGCATTT 60.079 52.632 30.44 16.91 38.21 2.32
334 335 2.580276 CCGCAATGCCTTGGCATT 59.420 55.556 28.20 28.20 40.54 3.56
335 336 4.151582 GCCGCAATGCCTTGGCAT 62.152 61.111 20.26 20.26 46.76 4.40
338 339 2.484062 CCTAGCCGCAATGCCTTGG 61.484 63.158 0.00 0.00 32.72 3.61
339 340 3.113745 CCTAGCCGCAATGCCTTG 58.886 61.111 0.00 0.00 35.36 3.61
340 341 2.830370 GCCTAGCCGCAATGCCTT 60.830 61.111 0.00 0.00 0.00 4.35
341 342 3.426309 ATGCCTAGCCGCAATGCCT 62.426 57.895 0.00 0.00 43.24 4.75
342 343 2.908940 ATGCCTAGCCGCAATGCC 60.909 61.111 0.00 0.00 43.24 4.40
343 344 2.641559 GATGCCTAGCCGCAATGC 59.358 61.111 0.00 0.00 43.24 3.56
344 345 1.563435 CTCGATGCCTAGCCGCAATG 61.563 60.000 0.00 0.00 43.24 2.82
345 346 1.301244 CTCGATGCCTAGCCGCAAT 60.301 57.895 0.00 0.00 43.24 3.56
346 347 2.106938 CTCGATGCCTAGCCGCAA 59.893 61.111 0.00 0.00 43.24 4.85
347 348 3.916544 CCTCGATGCCTAGCCGCA 61.917 66.667 0.00 0.00 44.35 5.69
348 349 3.565910 CTCCTCGATGCCTAGCCGC 62.566 68.421 0.00 0.00 0.00 6.53
349 350 1.739338 AACTCCTCGATGCCTAGCCG 61.739 60.000 0.00 0.00 0.00 5.52
350 351 0.032815 GAACTCCTCGATGCCTAGCC 59.967 60.000 0.00 0.00 0.00 3.93
351 352 3.579066 GAACTCCTCGATGCCTAGC 57.421 57.895 0.00 0.00 0.00 3.42
361 362 2.103340 GAGCCGCTCGAACTCCTC 59.897 66.667 4.23 0.00 0.00 3.71
362 363 2.676822 TGAGCCGCTCGAACTCCT 60.677 61.111 15.58 0.00 32.35 3.69
363 364 2.507324 GTGAGCCGCTCGAACTCC 60.507 66.667 15.58 0.00 32.35 3.85
364 365 2.089349 GTGTGAGCCGCTCGAACTC 61.089 63.158 15.58 6.54 32.35 3.01
365 366 2.049063 GTGTGAGCCGCTCGAACT 60.049 61.111 15.58 0.00 32.35 3.01
366 367 2.049063 AGTGTGAGCCGCTCGAAC 60.049 61.111 15.58 14.96 32.35 3.95
367 368 2.049156 CAGTGTGAGCCGCTCGAA 60.049 61.111 15.58 3.37 32.35 3.71
368 369 2.856628 AACAGTGTGAGCCGCTCGA 61.857 57.895 15.58 1.88 32.35 4.04
369 370 2.356313 AACAGTGTGAGCCGCTCG 60.356 61.111 15.58 3.46 32.35 5.03
370 371 1.287730 CTCAACAGTGTGAGCCGCTC 61.288 60.000 13.81 13.81 38.74 5.03
371 372 1.301244 CTCAACAGTGTGAGCCGCT 60.301 57.895 0.00 0.00 38.74 5.52
372 373 2.320587 CCTCAACAGTGTGAGCCGC 61.321 63.158 13.93 0.00 43.18 6.53
373 374 1.669115 CCCTCAACAGTGTGAGCCG 60.669 63.158 13.93 5.82 43.18 5.52
374 375 1.302832 CCCCTCAACAGTGTGAGCC 60.303 63.158 13.93 0.00 43.18 4.70
375 376 0.179018 AACCCCTCAACAGTGTGAGC 60.179 55.000 13.93 0.00 43.18 4.26
376 377 1.597742 CAACCCCTCAACAGTGTGAG 58.402 55.000 12.93 12.93 43.98 3.51
377 378 0.465460 GCAACCCCTCAACAGTGTGA 60.465 55.000 0.00 0.00 0.00 3.58
378 379 1.455383 GGCAACCCCTCAACAGTGTG 61.455 60.000 0.00 0.00 0.00 3.82
379 380 1.152756 GGCAACCCCTCAACAGTGT 60.153 57.895 0.00 0.00 0.00 3.55
380 381 0.540365 ATGGCAACCCCTCAACAGTG 60.540 55.000 0.00 0.00 0.00 3.66
381 382 0.540365 CATGGCAACCCCTCAACAGT 60.540 55.000 0.00 0.00 0.00 3.55
382 383 0.540365 ACATGGCAACCCCTCAACAG 60.540 55.000 0.00 0.00 0.00 3.16
383 384 0.539438 GACATGGCAACCCCTCAACA 60.539 55.000 0.00 0.00 0.00 3.33
384 385 1.250840 GGACATGGCAACCCCTCAAC 61.251 60.000 0.00 0.00 0.00 3.18
385 386 1.076549 GGACATGGCAACCCCTCAA 59.923 57.895 0.00 0.00 0.00 3.02
386 387 2.763215 GGACATGGCAACCCCTCA 59.237 61.111 0.00 0.00 0.00 3.86
387 388 2.438434 CGGACATGGCAACCCCTC 60.438 66.667 0.00 0.00 0.00 4.30
388 389 4.047125 CCGGACATGGCAACCCCT 62.047 66.667 0.00 0.00 0.00 4.79
389 390 4.360405 ACCGGACATGGCAACCCC 62.360 66.667 9.46 0.00 0.00 4.95
390 391 1.906105 TAGACCGGACATGGCAACCC 61.906 60.000 9.46 0.00 0.00 4.11
391 392 0.180406 ATAGACCGGACATGGCAACC 59.820 55.000 9.46 0.00 0.00 3.77
392 393 1.299541 CATAGACCGGACATGGCAAC 58.700 55.000 9.46 0.00 0.00 4.17
393 394 0.463654 GCATAGACCGGACATGGCAA 60.464 55.000 9.46 0.00 0.00 4.52
394 395 1.146041 GCATAGACCGGACATGGCA 59.854 57.895 9.46 0.00 0.00 4.92
395 396 0.679505 TAGCATAGACCGGACATGGC 59.320 55.000 9.46 7.06 0.00 4.40
396 397 5.344743 AATATAGCATAGACCGGACATGG 57.655 43.478 9.46 0.00 0.00 3.66
397 398 7.548097 ACTAAATATAGCATAGACCGGACATG 58.452 38.462 9.46 9.42 31.96 3.21
398 399 7.719871 ACTAAATATAGCATAGACCGGACAT 57.280 36.000 9.46 0.00 31.96 3.06
399 400 7.534723 AACTAAATATAGCATAGACCGGACA 57.465 36.000 9.46 0.00 31.96 4.02
400 401 8.086522 TCAAACTAAATATAGCATAGACCGGAC 58.913 37.037 9.46 0.10 31.96 4.79
401 402 8.185506 TCAAACTAAATATAGCATAGACCGGA 57.814 34.615 9.46 0.00 31.96 5.14
402 403 9.088512 GATCAAACTAAATATAGCATAGACCGG 57.911 37.037 0.00 0.00 31.96 5.28
403 404 9.639601 TGATCAAACTAAATATAGCATAGACCG 57.360 33.333 0.00 0.00 31.96 4.79
409 410 9.325198 TCAACGTGATCAAACTAAATATAGCAT 57.675 29.630 0.00 0.00 31.96 3.79
410 411 8.710835 TCAACGTGATCAAACTAAATATAGCA 57.289 30.769 0.00 0.00 31.96 3.49
414 415 8.405531 CCCATTCAACGTGATCAAACTAAATAT 58.594 33.333 0.00 0.00 0.00 1.28
415 416 7.627513 GCCCATTCAACGTGATCAAACTAAATA 60.628 37.037 0.00 0.00 0.00 1.40
416 417 6.620678 CCCATTCAACGTGATCAAACTAAAT 58.379 36.000 0.00 0.00 0.00 1.40
417 418 5.563867 GCCCATTCAACGTGATCAAACTAAA 60.564 40.000 0.00 0.00 0.00 1.85
418 419 4.083003 GCCCATTCAACGTGATCAAACTAA 60.083 41.667 0.00 0.00 0.00 2.24
419 420 3.438781 GCCCATTCAACGTGATCAAACTA 59.561 43.478 0.00 0.00 0.00 2.24
420 421 2.228822 GCCCATTCAACGTGATCAAACT 59.771 45.455 0.00 0.00 0.00 2.66
421 422 2.228822 AGCCCATTCAACGTGATCAAAC 59.771 45.455 0.00 0.00 0.00 2.93
422 423 2.513753 AGCCCATTCAACGTGATCAAA 58.486 42.857 0.00 0.00 0.00 2.69
423 424 2.198827 AGCCCATTCAACGTGATCAA 57.801 45.000 0.00 0.00 0.00 2.57
424 425 1.811965 CAAGCCCATTCAACGTGATCA 59.188 47.619 0.00 0.00 0.00 2.92
425 426 1.468054 GCAAGCCCATTCAACGTGATC 60.468 52.381 0.00 0.00 0.00 2.92
426 427 0.527565 GCAAGCCCATTCAACGTGAT 59.472 50.000 0.00 0.00 0.00 3.06
427 428 0.821301 TGCAAGCCCATTCAACGTGA 60.821 50.000 0.00 0.00 0.00 4.35
428 429 0.244450 ATGCAAGCCCATTCAACGTG 59.756 50.000 0.00 0.00 0.00 4.49
429 430 0.244450 CATGCAAGCCCATTCAACGT 59.756 50.000 0.00 0.00 0.00 3.99
430 431 0.458889 CCATGCAAGCCCATTCAACG 60.459 55.000 0.00 0.00 0.00 4.10
431 432 0.896923 TCCATGCAAGCCCATTCAAC 59.103 50.000 0.00 0.00 0.00 3.18
432 433 1.868713 ATCCATGCAAGCCCATTCAA 58.131 45.000 0.00 0.00 0.00 2.69
433 434 1.868713 AATCCATGCAAGCCCATTCA 58.131 45.000 0.00 0.00 0.00 2.57
434 435 2.557317 CAAATCCATGCAAGCCCATTC 58.443 47.619 0.00 0.00 0.00 2.67
435 436 1.210967 CCAAATCCATGCAAGCCCATT 59.789 47.619 0.00 0.00 0.00 3.16
436 437 0.834612 CCAAATCCATGCAAGCCCAT 59.165 50.000 0.00 0.00 0.00 4.00
437 438 0.252148 TCCAAATCCATGCAAGCCCA 60.252 50.000 0.00 0.00 0.00 5.36
438 439 0.903942 TTCCAAATCCATGCAAGCCC 59.096 50.000 0.00 0.00 0.00 5.19
439 440 1.551883 ACTTCCAAATCCATGCAAGCC 59.448 47.619 0.00 0.00 0.00 4.35
440 441 3.256558 GAACTTCCAAATCCATGCAAGC 58.743 45.455 0.00 0.00 0.00 4.01
441 442 4.219070 TCTGAACTTCCAAATCCATGCAAG 59.781 41.667 0.00 0.00 0.00 4.01
442 443 4.022068 GTCTGAACTTCCAAATCCATGCAA 60.022 41.667 0.00 0.00 0.00 4.08
443 444 3.507233 GTCTGAACTTCCAAATCCATGCA 59.493 43.478 0.00 0.00 0.00 3.96
444 445 3.426695 CGTCTGAACTTCCAAATCCATGC 60.427 47.826 0.00 0.00 0.00 4.06
445 446 3.753272 ACGTCTGAACTTCCAAATCCATG 59.247 43.478 0.00 0.00 0.00 3.66
446 447 3.753272 CACGTCTGAACTTCCAAATCCAT 59.247 43.478 0.00 0.00 0.00 3.41
447 448 3.138304 CACGTCTGAACTTCCAAATCCA 58.862 45.455 0.00 0.00 0.00 3.41
448 449 3.399330 TCACGTCTGAACTTCCAAATCC 58.601 45.455 0.00 0.00 0.00 3.01
449 450 4.307432 TCTCACGTCTGAACTTCCAAATC 58.693 43.478 0.00 0.00 0.00 2.17
450 451 4.310769 CTCTCACGTCTGAACTTCCAAAT 58.689 43.478 0.00 0.00 0.00 2.32
451 452 3.492656 CCTCTCACGTCTGAACTTCCAAA 60.493 47.826 0.00 0.00 0.00 3.28
452 453 2.035961 CCTCTCACGTCTGAACTTCCAA 59.964 50.000 0.00 0.00 0.00 3.53
453 454 1.613925 CCTCTCACGTCTGAACTTCCA 59.386 52.381 0.00 0.00 0.00 3.53
454 455 1.887198 TCCTCTCACGTCTGAACTTCC 59.113 52.381 0.00 0.00 0.00 3.46
455 456 3.570559 CTTCCTCTCACGTCTGAACTTC 58.429 50.000 0.00 0.00 0.00 3.01
456 457 2.297597 CCTTCCTCTCACGTCTGAACTT 59.702 50.000 0.00 0.00 0.00 2.66
457 458 1.889829 CCTTCCTCTCACGTCTGAACT 59.110 52.381 0.00 0.00 0.00 3.01
458 459 1.670380 GCCTTCCTCTCACGTCTGAAC 60.670 57.143 0.00 0.00 0.00 3.18
459 460 0.603569 GCCTTCCTCTCACGTCTGAA 59.396 55.000 0.00 0.00 0.00 3.02
460 461 0.251386 AGCCTTCCTCTCACGTCTGA 60.251 55.000 0.00 0.00 0.00 3.27
461 462 0.108898 CAGCCTTCCTCTCACGTCTG 60.109 60.000 0.00 0.00 0.00 3.51
462 463 1.882989 GCAGCCTTCCTCTCACGTCT 61.883 60.000 0.00 0.00 0.00 4.18
463 464 1.446966 GCAGCCTTCCTCTCACGTC 60.447 63.158 0.00 0.00 0.00 4.34
464 465 1.548357 ATGCAGCCTTCCTCTCACGT 61.548 55.000 0.00 0.00 0.00 4.49
465 466 0.461548 TATGCAGCCTTCCTCTCACG 59.538 55.000 0.00 0.00 0.00 4.35
466 467 1.804372 CGTATGCAGCCTTCCTCTCAC 60.804 57.143 0.00 0.00 0.00 3.51
467 468 0.461548 CGTATGCAGCCTTCCTCTCA 59.538 55.000 0.00 0.00 0.00 3.27
468 469 0.878086 GCGTATGCAGCCTTCCTCTC 60.878 60.000 0.89 0.00 42.15 3.20
469 470 1.144936 GCGTATGCAGCCTTCCTCT 59.855 57.895 0.89 0.00 42.15 3.69
470 471 2.240500 CGCGTATGCAGCCTTCCTC 61.241 63.158 7.86 0.00 42.97 3.71
471 472 2.202932 CGCGTATGCAGCCTTCCT 60.203 61.111 7.86 0.00 42.97 3.36
472 473 1.766143 CTTCGCGTATGCAGCCTTCC 61.766 60.000 5.77 0.00 42.97 3.46
473 474 0.806102 TCTTCGCGTATGCAGCCTTC 60.806 55.000 5.77 0.00 42.97 3.46
474 475 0.391130 TTCTTCGCGTATGCAGCCTT 60.391 50.000 5.77 0.00 42.97 4.35
475 476 0.391130 TTTCTTCGCGTATGCAGCCT 60.391 50.000 5.77 0.00 42.97 4.58
476 477 0.657840 ATTTCTTCGCGTATGCAGCC 59.342 50.000 5.77 0.00 42.97 4.85
477 478 1.327460 TCATTTCTTCGCGTATGCAGC 59.673 47.619 5.77 0.00 42.97 5.25
478 479 2.860136 TCTCATTTCTTCGCGTATGCAG 59.140 45.455 5.77 0.00 42.97 4.41
479 480 2.860136 CTCTCATTTCTTCGCGTATGCA 59.140 45.455 5.77 0.00 42.97 3.96
480 481 3.116300 TCTCTCATTTCTTCGCGTATGC 58.884 45.455 5.77 0.00 37.91 3.14
481 482 4.978580 TCATCTCTCATTTCTTCGCGTATG 59.021 41.667 5.77 3.96 0.00 2.39
482 483 5.188327 TCATCTCTCATTTCTTCGCGTAT 57.812 39.130 5.77 0.00 0.00 3.06
483 484 4.602006 CTCATCTCTCATTTCTTCGCGTA 58.398 43.478 5.77 0.00 0.00 4.42
484 485 3.443037 CTCATCTCTCATTTCTTCGCGT 58.557 45.455 5.77 0.00 0.00 6.01
485 486 2.218302 GCTCATCTCTCATTTCTTCGCG 59.782 50.000 0.00 0.00 0.00 5.87
486 487 2.218302 CGCTCATCTCTCATTTCTTCGC 59.782 50.000 0.00 0.00 0.00 4.70
487 488 3.242480 CACGCTCATCTCTCATTTCTTCG 59.758 47.826 0.00 0.00 0.00 3.79
488 489 3.001127 GCACGCTCATCTCTCATTTCTTC 59.999 47.826 0.00 0.00 0.00 2.87
489 490 2.935201 GCACGCTCATCTCTCATTTCTT 59.065 45.455 0.00 0.00 0.00 2.52
490 491 2.093816 TGCACGCTCATCTCTCATTTCT 60.094 45.455 0.00 0.00 0.00 2.52
491 492 2.030213 GTGCACGCTCATCTCTCATTTC 59.970 50.000 0.00 0.00 0.00 2.17
492 493 2.005451 GTGCACGCTCATCTCTCATTT 58.995 47.619 0.00 0.00 0.00 2.32
493 494 1.206610 AGTGCACGCTCATCTCTCATT 59.793 47.619 12.01 0.00 0.00 2.57
494 495 0.822811 AGTGCACGCTCATCTCTCAT 59.177 50.000 12.01 0.00 0.00 2.90
495 496 0.108945 CAGTGCACGCTCATCTCTCA 60.109 55.000 12.01 0.00 0.00 3.27
496 497 0.108898 ACAGTGCACGCTCATCTCTC 60.109 55.000 12.01 0.00 0.00 3.20
497 498 1.133982 CTACAGTGCACGCTCATCTCT 59.866 52.381 12.01 0.00 0.00 3.10
498 499 1.133216 TCTACAGTGCACGCTCATCTC 59.867 52.381 12.01 0.00 0.00 2.75
499 500 1.135257 GTCTACAGTGCACGCTCATCT 60.135 52.381 12.01 0.00 0.00 2.90
500 501 1.272781 GTCTACAGTGCACGCTCATC 58.727 55.000 12.01 0.00 0.00 2.92
501 502 0.456824 CGTCTACAGTGCACGCTCAT 60.457 55.000 12.01 0.00 0.00 2.90
502 503 1.081442 CGTCTACAGTGCACGCTCA 60.081 57.895 12.01 0.00 0.00 4.26
503 504 3.755404 CGTCTACAGTGCACGCTC 58.245 61.111 12.01 0.00 0.00 5.03
506 507 0.446616 TAGAGCGTCTACAGTGCACG 59.553 55.000 12.01 9.15 36.60 5.34
507 508 2.161808 TCTTAGAGCGTCTACAGTGCAC 59.838 50.000 9.40 9.40 0.00 4.57
508 509 2.420372 CTCTTAGAGCGTCTACAGTGCA 59.580 50.000 0.00 0.00 0.00 4.57
509 510 2.793237 GCTCTTAGAGCGTCTACAGTGC 60.793 54.545 18.89 0.00 45.85 4.40
510 511 3.059634 GCTCTTAGAGCGTCTACAGTG 57.940 52.381 18.89 0.00 45.85 3.66
520 521 9.821662 TAAAAGATTTTAAAACGCTCTTAGAGC 57.178 29.630 23.05 23.05 39.47 4.09
525 526 9.575783 TGTTGTAAAAGATTTTAAAACGCTCTT 57.424 25.926 19.10 6.16 46.49 2.85
547 548 9.033481 TGCTTTCAAGAAAATAAGAACATGTTG 57.967 29.630 17.58 0.00 0.00 3.33
567 568 1.524008 CCGGTGGGTTCCTTGCTTTC 61.524 60.000 0.00 0.00 0.00 2.62
600 608 4.134187 GTGACGTCCGTGCATGCG 62.134 66.667 14.12 2.14 0.00 4.73
601 609 1.841663 AAAGTGACGTCCGTGCATGC 61.842 55.000 14.12 11.82 0.00 4.06
602 610 0.163788 GAAAGTGACGTCCGTGCATG 59.836 55.000 14.12 0.00 0.00 4.06
603 611 0.033504 AGAAAGTGACGTCCGTGCAT 59.966 50.000 14.12 0.00 0.00 3.96
620 628 2.507102 GCTACGCAGCGCAAGAGA 60.507 61.111 16.61 0.00 38.22 3.10
633 642 0.247145 CGTCACCGCGAAATTGCTAC 60.247 55.000 8.23 0.00 0.00 3.58
635 644 1.626654 CTCGTCACCGCGAAATTGCT 61.627 55.000 8.23 0.00 40.57 3.91
712 722 2.229302 GGATATCTACGACTCTGCCACC 59.771 54.545 2.05 0.00 0.00 4.61
830 840 6.030228 CGATCGATCAATCAATCGGATAGAA 58.970 40.000 24.40 0.00 46.59 2.10
966 984 0.952984 GGTGAGCTGAGGTGAGTTGC 60.953 60.000 0.00 0.00 0.00 4.17
968 986 0.972883 GAGGTGAGCTGAGGTGAGTT 59.027 55.000 0.00 0.00 0.00 3.01
969 987 0.902516 GGAGGTGAGCTGAGGTGAGT 60.903 60.000 0.00 0.00 0.00 3.41
970 988 1.612395 GGGAGGTGAGCTGAGGTGAG 61.612 65.000 0.00 0.00 0.00 3.51
971 989 1.610673 GGGAGGTGAGCTGAGGTGA 60.611 63.158 0.00 0.00 0.00 4.02
974 992 2.063378 GGAGGGAGGTGAGCTGAGG 61.063 68.421 0.00 0.00 0.00 3.86
984 1002 2.041405 GAGAGTGGGGGAGGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
1240 1269 3.063052 GCGCTACGTTACGGCACAC 62.063 63.158 10.20 0.00 0.00 3.82
1241 1270 2.806198 GCGCTACGTTACGGCACA 60.806 61.111 10.20 0.00 0.00 4.57
1242 1271 2.785105 CTGCGCTACGTTACGGCAC 61.785 63.158 9.73 0.00 0.00 5.01
1243 1272 2.505337 CTGCGCTACGTTACGGCA 60.505 61.111 9.73 7.95 0.00 5.69
1244 1273 3.910104 GCTGCGCTACGTTACGGC 61.910 66.667 9.73 3.09 0.00 5.68
1245 1274 2.505337 TGCTGCGCTACGTTACGG 60.505 61.111 9.73 0.00 0.00 4.02
1246 1275 1.464429 CTCTGCTGCGCTACGTTACG 61.464 60.000 9.73 2.19 0.00 3.18
1247 1276 1.140407 CCTCTGCTGCGCTACGTTAC 61.140 60.000 9.73 0.00 0.00 2.50
1248 1277 1.138883 CCTCTGCTGCGCTACGTTA 59.861 57.895 9.73 0.00 0.00 3.18
1249 1278 2.125912 CCTCTGCTGCGCTACGTT 60.126 61.111 9.73 0.00 0.00 3.99
1267 1296 1.503542 CGCCACAGTTTGATCAGCC 59.496 57.895 0.00 0.00 0.00 4.85
1274 1303 0.437295 GTAGTACGCGCCACAGTTTG 59.563 55.000 5.73 0.00 0.00 2.93
1333 1362 5.655090 TCATCAGAAATTCAGAACATGCCAT 59.345 36.000 0.00 0.00 0.00 4.40
1334 1363 5.011586 TCATCAGAAATTCAGAACATGCCA 58.988 37.500 0.00 0.00 0.00 4.92
1335 1364 5.571784 TCATCAGAAATTCAGAACATGCC 57.428 39.130 0.00 0.00 0.00 4.40
1336 1365 6.792326 TGATCATCAGAAATTCAGAACATGC 58.208 36.000 0.00 0.00 0.00 4.06
1337 1366 9.880064 GTATGATCATCAGAAATTCAGAACATG 57.120 33.333 12.53 0.00 0.00 3.21
1366 1395 5.025453 AGGGGAAAAATCTATGCATGTGTT 58.975 37.500 10.16 0.00 0.00 3.32
1378 1407 5.653769 TCTCATGACATCAAGGGGAAAAATC 59.346 40.000 0.00 0.00 0.00 2.17
1641 1707 6.418057 AGCCAAAATCACCATAAAAGTCAA 57.582 33.333 0.00 0.00 0.00 3.18
1644 1710 7.278875 TGAAAAGCCAAAATCACCATAAAAGT 58.721 30.769 0.00 0.00 0.00 2.66
1706 1782 7.489574 TGACAAAAATTGGTAATCTTTTGGC 57.510 32.000 10.01 7.77 43.86 4.52
1722 1798 6.479660 GGCAGAATTCAGATGTTTGACAAAAA 59.520 34.615 8.44 0.00 0.00 1.94
1747 1823 6.311445 GTGACACTTGATTATGGTAGACTGTG 59.689 42.308 0.00 0.00 0.00 3.66
1761 1837 2.881403 GCTCCATTGGGTGACACTTGAT 60.881 50.000 5.39 0.00 34.93 2.57
1774 1850 4.763073 TGTTCTGATGTAGAGCTCCATTG 58.237 43.478 10.93 5.53 37.51 2.82
1777 1853 4.285020 AGATGTTCTGATGTAGAGCTCCA 58.715 43.478 10.93 2.07 37.51 3.86
1778 1854 4.340666 TGAGATGTTCTGATGTAGAGCTCC 59.659 45.833 10.93 0.00 37.51 4.70
1779 1855 5.512753 TGAGATGTTCTGATGTAGAGCTC 57.487 43.478 5.27 5.27 37.51 4.09
1780 1856 5.739647 GCATGAGATGTTCTGATGTAGAGCT 60.740 44.000 0.00 0.00 39.75 4.09
1781 1857 4.448395 GCATGAGATGTTCTGATGTAGAGC 59.552 45.833 0.00 0.00 39.75 4.09
1782 1858 5.462729 GTGCATGAGATGTTCTGATGTAGAG 59.537 44.000 0.00 0.00 39.75 2.43
1783 1859 5.105228 TGTGCATGAGATGTTCTGATGTAGA 60.105 40.000 0.00 0.00 39.75 2.59
1784 1860 5.114081 TGTGCATGAGATGTTCTGATGTAG 58.886 41.667 0.00 0.00 39.75 2.74
1785 1861 5.088680 TGTGCATGAGATGTTCTGATGTA 57.911 39.130 0.00 0.00 39.75 2.29
1786 1862 3.939592 CTGTGCATGAGATGTTCTGATGT 59.060 43.478 0.00 0.00 39.75 3.06
1787 1863 3.242772 GCTGTGCATGAGATGTTCTGATG 60.243 47.826 0.00 0.31 40.40 3.07
1789 1865 2.289819 TGCTGTGCATGAGATGTTCTGA 60.290 45.455 0.00 0.00 31.71 3.27
1790 1866 2.081462 TGCTGTGCATGAGATGTTCTG 58.919 47.619 0.00 0.00 31.71 3.02
1791 1867 2.484742 TGCTGTGCATGAGATGTTCT 57.515 45.000 0.00 0.00 31.71 3.01
1792 1868 3.499048 CTTTGCTGTGCATGAGATGTTC 58.501 45.455 0.00 0.00 38.76 3.18
1793 1869 2.352421 GCTTTGCTGTGCATGAGATGTT 60.352 45.455 0.00 0.00 38.76 2.71
1795 1871 1.472878 AGCTTTGCTGTGCATGAGATG 59.527 47.619 0.00 0.00 38.76 2.90
1796 1872 1.835494 AGCTTTGCTGTGCATGAGAT 58.165 45.000 0.00 0.00 38.76 2.75
1807 1883 5.095490 GCAAACGAATAATACAGCTTTGCT 58.905 37.500 0.00 0.00 39.15 3.91
1808 1884 4.856487 TGCAAACGAATAATACAGCTTTGC 59.144 37.500 4.76 4.76 41.42 3.68
1809 1885 6.968904 AGATGCAAACGAATAATACAGCTTTG 59.031 34.615 0.00 0.00 0.00 2.77
1812 1888 6.540189 AGAAGATGCAAACGAATAATACAGCT 59.460 34.615 0.00 0.00 0.00 4.24
1813 1889 6.719365 AGAAGATGCAAACGAATAATACAGC 58.281 36.000 0.00 0.00 0.00 4.40
1814 1890 8.491152 CCTAGAAGATGCAAACGAATAATACAG 58.509 37.037 0.00 0.00 0.00 2.74
1815 1891 8.201464 TCCTAGAAGATGCAAACGAATAATACA 58.799 33.333 0.00 0.00 0.00 2.29
1816 1892 8.589335 TCCTAGAAGATGCAAACGAATAATAC 57.411 34.615 0.00 0.00 0.00 1.89
1817 1893 8.421784 ACTCCTAGAAGATGCAAACGAATAATA 58.578 33.333 0.00 0.00 0.00 0.98
1819 1895 6.640518 ACTCCTAGAAGATGCAAACGAATAA 58.359 36.000 0.00 0.00 0.00 1.40
1820 1896 6.222038 ACTCCTAGAAGATGCAAACGAATA 57.778 37.500 0.00 0.00 0.00 1.75
1821 1897 5.091261 ACTCCTAGAAGATGCAAACGAAT 57.909 39.130 0.00 0.00 0.00 3.34
1822 1898 4.537135 ACTCCTAGAAGATGCAAACGAA 57.463 40.909 0.00 0.00 0.00 3.85
1823 1899 4.705507 AGTACTCCTAGAAGATGCAAACGA 59.294 41.667 0.00 0.00 0.00 3.85
1824 1900 5.000012 AGTACTCCTAGAAGATGCAAACG 58.000 43.478 0.00 0.00 0.00 3.60
1826 1952 8.818622 TTAGTAGTACTCCTAGAAGATGCAAA 57.181 34.615 5.96 0.00 0.00 3.68
2050 2240 9.087424 TCTTCTAAACACAATCATATGAACTCG 57.913 33.333 9.99 1.98 0.00 4.18
2147 2337 3.872240 GCACCTACTATGTCTGCCCAAAA 60.872 47.826 0.00 0.00 0.00 2.44
2283 2481 4.566426 AGCTTGGCTCTCTTTGATACTT 57.434 40.909 0.00 0.00 30.62 2.24
2443 2644 4.645535 CAGTGAATGAAGAACAGAAGGGA 58.354 43.478 0.00 0.00 0.00 4.20
2589 2790 1.929806 TAGTCAGTACGCACGCCAGG 61.930 60.000 0.00 0.00 0.00 4.45
2590 2791 0.523546 CTAGTCAGTACGCACGCCAG 60.524 60.000 0.00 0.00 0.00 4.85
2615 2816 5.949735 TGAACTCAACTGAACCTTGAAAAC 58.050 37.500 0.00 0.00 0.00 2.43
2780 2981 1.371183 CTTCACCTTGACCCGCAGA 59.629 57.895 0.00 0.00 0.00 4.26
2789 2990 2.032528 TCCGCCAGCTTCACCTTG 59.967 61.111 0.00 0.00 0.00 3.61
3111 3312 1.496001 AGGGAGGAATGTGCATGCATA 59.504 47.619 25.64 22.69 0.00 3.14
3112 3313 0.260816 AGGGAGGAATGTGCATGCAT 59.739 50.000 25.64 8.04 0.00 3.96
3113 3314 0.681887 CAGGGAGGAATGTGCATGCA 60.682 55.000 18.46 18.46 0.00 3.96
3114 3315 0.682209 ACAGGGAGGAATGTGCATGC 60.682 55.000 11.82 11.82 0.00 4.06
3122 3323 0.824759 GTACGCAGACAGGGAGGAAT 59.175 55.000 0.00 0.00 0.00 3.01
3182 3387 3.495001 GGACTCTGAAAAACTCAAGTCCG 59.505 47.826 14.59 0.00 43.97 4.79
3254 3462 6.156602 TCCGGGTAGAAAGTTCCATTACATAA 59.843 38.462 0.00 0.00 0.00 1.90
3277 3485 6.057627 GCATCATAAGCATGCATATACTCC 57.942 41.667 21.98 4.08 45.19 3.85
3287 3495 5.472478 ACATGGTCTTAGCATCATAAGCATG 59.528 40.000 9.93 9.93 38.21 4.06
3289 3497 5.039920 ACATGGTCTTAGCATCATAAGCA 57.960 39.130 0.00 0.00 33.46 3.91
3290 3498 5.059161 TGACATGGTCTTAGCATCATAAGC 58.941 41.667 0.00 0.00 33.46 3.09
3291 3499 6.286758 ACTGACATGGTCTTAGCATCATAAG 58.713 40.000 0.00 0.00 33.46 1.73
3292 3500 6.239217 ACTGACATGGTCTTAGCATCATAA 57.761 37.500 0.00 0.00 33.46 1.90
3295 3503 4.558226 AACTGACATGGTCTTAGCATCA 57.442 40.909 0.00 0.00 33.46 3.07
3297 3505 5.877012 CAGTTAACTGACATGGTCTTAGCAT 59.123 40.000 28.17 0.00 46.59 3.79
3298 3506 5.221641 ACAGTTAACTGACATGGTCTTAGCA 60.222 40.000 36.14 0.00 46.59 3.49
3299 3507 5.120830 CACAGTTAACTGACATGGTCTTAGC 59.879 44.000 36.14 0.00 46.59 3.09
3300 3508 6.455647 TCACAGTTAACTGACATGGTCTTAG 58.544 40.000 36.14 10.38 46.59 2.18
3362 3573 3.119096 GAAGGGAAGTGCGCCGTC 61.119 66.667 4.18 3.98 0.00 4.79
3395 3607 3.340034 CAAAACAATCCACCGTAGCCTA 58.660 45.455 0.00 0.00 0.00 3.93
3564 3776 2.052690 CGAGGAGGAAGGGAAGCGA 61.053 63.158 0.00 0.00 0.00 4.93
4001 4213 2.233566 AGGCTGGCAAGGATGTGGA 61.234 57.895 3.38 0.00 0.00 4.02
4045 4263 1.673760 CGCAGGTGTTTGATTTGACG 58.326 50.000 0.00 0.00 0.00 4.35
4079 4297 3.467226 TGCTCGATCGGTTCCCCC 61.467 66.667 16.41 0.00 0.00 5.40
4105 4323 5.381174 TCATCCGAGGGTACGTATATTTG 57.619 43.478 0.00 0.00 0.00 2.32
4111 4329 0.182061 AGCTCATCCGAGGGTACGTA 59.818 55.000 0.00 0.00 39.88 3.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.