Multiple sequence alignment - TraesCS6B01G181300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G181300 chr6B 100.000 7655 0 0 705 8359 202592317 202599971 0.000000e+00 14137.0
1 TraesCS6B01G181300 chr6B 100.000 225 0 0 1 225 202591613 202591837 4.670000e-112 416.0
2 TraesCS6B01G181300 chr6B 93.976 166 6 4 7852 8015 211161635 211161472 1.800000e-61 248.0
3 TraesCS6B01G181300 chr6B 81.498 227 26 8 8144 8359 63560647 63560426 1.120000e-38 172.0
4 TraesCS6B01G181300 chr6D 95.465 5755 122 46 705 6386 113500444 113506132 0.000000e+00 9053.0
5 TraesCS6B01G181300 chr6D 93.901 1492 66 13 6384 7857 113507410 113508894 0.000000e+00 2228.0
6 TraesCS6B01G181300 chr6D 83.007 153 21 3 8206 8358 30236349 30236496 5.260000e-27 134.0
7 TraesCS6B01G181300 chr6D 100.000 29 0 0 3291 3319 113503054 113503026 4.000000e-03 54.7
8 TraesCS6B01G181300 chr6A 95.376 3806 102 22 4123 7857 141362367 141366169 0.000000e+00 5986.0
9 TraesCS6B01G181300 chr6A 92.619 3414 121 63 730 4094 141359040 141362371 0.000000e+00 4787.0
10 TraesCS6B01G181300 chr6A 100.000 33 0 0 8006 8038 141366193 141366225 2.520000e-05 62.1
11 TraesCS6B01G181300 chr6A 100.000 29 0 0 3291 3319 141361644 141361616 4.000000e-03 54.7
12 TraesCS6B01G181300 chr7A 96.203 158 4 2 7852 8007 320981329 320981172 2.990000e-64 257.0
13 TraesCS6B01G181300 chr3D 94.643 168 6 3 7852 8017 165471240 165471406 2.990000e-64 257.0
14 TraesCS6B01G181300 chr2D 96.774 155 3 2 7854 8006 446317797 446317643 2.990000e-64 257.0
15 TraesCS6B01G181300 chr2D 95.597 159 5 2 7852 8008 426427957 426427799 3.870000e-63 254.0
16 TraesCS6B01G181300 chr2D 93.976 166 8 2 7852 8015 29162397 29162562 5.010000e-62 250.0
17 TraesCS6B01G181300 chr2D 83.700 227 17 9 8145 8359 7656546 7656328 6.620000e-46 196.0
18 TraesCS6B01G181300 chr2D 80.296 203 24 12 8158 8359 32016451 32016264 1.130000e-28 139.0
19 TraesCS6B01G181300 chr3A 96.203 158 3 3 7854 8009 649811994 649811838 1.080000e-63 255.0
20 TraesCS6B01G181300 chr4B 95.062 162 6 2 7854 8013 284234565 284234404 3.870000e-63 254.0
21 TraesCS6B01G181300 chr1B 94.512 164 6 3 7848 8009 31742293 31742131 5.010000e-62 250.0
22 TraesCS6B01G181300 chr1B 82.540 126 15 5 7854 7976 6543484 6543363 4.130000e-18 104.0
23 TraesCS6B01G181300 chr5A 82.119 302 40 7 5776 6073 37961294 37961003 6.480000e-61 246.0
24 TraesCS6B01G181300 chr5B 82.222 225 30 5 8142 8359 162489586 162489807 1.430000e-42 185.0
25 TraesCS6B01G181300 chr5B 79.048 210 27 12 8158 8359 444764404 444764604 2.450000e-25 128.0
26 TraesCS6B01G181300 chr3B 88.435 147 14 3 8214 8359 4594441 4594297 3.100000e-39 174.0
27 TraesCS6B01G181300 chr3B 78.673 211 28 12 8158 8359 773631205 773631003 3.170000e-24 124.0
28 TraesCS6B01G181300 chr2A 80.617 227 28 10 8142 8359 306677024 306676805 2.410000e-35 161.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G181300 chr6B 202591613 202599971 8358 False 7276.5 14137 100.000000 1 8359 2 chr6B.!!$F1 8358
1 TraesCS6B01G181300 chr6D 113500444 113508894 8450 False 5640.5 9053 94.683000 705 7857 2 chr6D.!!$F2 7152
2 TraesCS6B01G181300 chr6A 141359040 141366225 7185 False 3611.7 5986 95.998333 730 8038 3 chr6A.!!$F1 7308

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
195 196 0.036010 CCATCACCACTCACCCACTC 60.036 60.000 0.00 0.0 0.00 3.51 F
196 197 0.036010 CATCACCACTCACCCACTCC 60.036 60.000 0.00 0.0 0.00 3.85 F
742 743 0.258774 ACAGGCCTCTCTCTCTCTCC 59.741 60.000 0.00 0.0 0.00 3.71 F
842 846 1.001406 CACCACTGTCAGTTCTCTCCC 59.999 57.143 1.67 0.0 0.00 4.30 F
1863 1920 1.066430 TGGATTGCGTCTCCAAGTACC 60.066 52.381 0.00 0.0 39.83 3.34 F
2729 2791 0.329596 AACTCACTGGAAGCATCCCC 59.670 55.000 5.34 0.0 45.95 4.81 F
4232 4307 0.037232 CCTTCCACGTCACCCTCTTC 60.037 60.000 0.00 0.0 0.00 2.87 F
4731 4815 2.190398 TGGCCATACCAGGTACAGAT 57.810 50.000 0.00 0.0 46.36 2.90 F
6250 6408 2.954316 TCGTCGTGCATGAACATACTT 58.046 42.857 10.93 0.0 0.00 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1877 1934 0.951558 AGCGCCACTTGTGTAAAAGG 59.048 50.000 2.29 0.00 0.00 3.11 R
2164 2222 6.482524 AGTTCTACCAGGGAAAGGAATTTAC 58.517 40.000 0.00 0.00 0.00 2.01 R
2454 2514 3.772572 TCAATCGGGATAAGAGGACAACA 59.227 43.478 0.00 0.00 0.00 3.33 R
2729 2791 6.831769 ACTGTTAAGTTTTGATAGCGACATG 58.168 36.000 0.00 0.00 30.14 3.21 R
3216 3278 1.168714 GAAGACCCTGCAACACATCC 58.831 55.000 0.00 0.00 0.00 3.51 R
4327 4402 0.323816 TCTCGAGCTGTGGATCCACT 60.324 55.000 37.92 23.25 46.30 4.00 R
5701 5842 2.342651 CAGCAACACGTACTGAGAATCG 59.657 50.000 0.00 0.00 38.61 3.34 R
6702 8140 1.395954 CATTGCATCACTGACCTGTCG 59.604 52.381 0.00 0.00 0.00 4.35 R
8041 9513 0.321919 AGGTGCATGTGAGCGATGTT 60.322 50.000 0.00 0.00 37.31 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.512914 GTCAGCAGGGCCCCCATC 62.513 72.222 21.43 4.95 38.92 3.51
26 27 4.157660 GGGCCCCCATCCCCTTTC 62.158 72.222 12.23 0.00 38.30 2.62
27 28 4.157660 GGCCCCCATCCCCTTTCC 62.158 72.222 0.00 0.00 0.00 3.13
28 29 4.157660 GCCCCCATCCCCTTTCCC 62.158 72.222 0.00 0.00 0.00 3.97
29 30 3.438812 CCCCCATCCCCTTTCCCC 61.439 72.222 0.00 0.00 0.00 4.81
30 31 2.287975 CCCCATCCCCTTTCCCCT 60.288 66.667 0.00 0.00 0.00 4.79
31 32 2.704424 CCCCATCCCCTTTCCCCTG 61.704 68.421 0.00 0.00 0.00 4.45
32 33 2.280079 CCATCCCCTTTCCCCTGC 59.720 66.667 0.00 0.00 0.00 4.85
33 34 2.625460 CCATCCCCTTTCCCCTGCA 61.625 63.158 0.00 0.00 0.00 4.41
34 35 1.380380 CATCCCCTTTCCCCTGCAC 60.380 63.158 0.00 0.00 0.00 4.57
35 36 2.983879 ATCCCCTTTCCCCTGCACG 61.984 63.158 0.00 0.00 0.00 5.34
36 37 4.740822 CCCCTTTCCCCTGCACGG 62.741 72.222 0.00 0.00 0.00 4.94
56 57 2.981302 CCGGTGGCATCAGTCTCA 59.019 61.111 0.00 0.00 0.00 3.27
57 58 1.448540 CCGGTGGCATCAGTCTCAC 60.449 63.158 0.00 0.00 0.00 3.51
58 59 1.807165 CGGTGGCATCAGTCTCACG 60.807 63.158 0.00 0.00 0.00 4.35
59 60 1.591703 GGTGGCATCAGTCTCACGA 59.408 57.895 0.00 0.00 0.00 4.35
60 61 0.459237 GGTGGCATCAGTCTCACGAG 60.459 60.000 0.00 0.00 0.00 4.18
61 62 0.528017 GTGGCATCAGTCTCACGAGA 59.472 55.000 0.00 0.00 34.56 4.04
62 63 1.067565 GTGGCATCAGTCTCACGAGAA 60.068 52.381 0.00 0.00 39.48 2.87
63 64 1.827344 TGGCATCAGTCTCACGAGAAT 59.173 47.619 0.00 0.00 39.48 2.40
64 65 3.023832 TGGCATCAGTCTCACGAGAATA 58.976 45.455 0.00 0.00 39.48 1.75
65 66 3.447229 TGGCATCAGTCTCACGAGAATAA 59.553 43.478 0.00 0.00 39.48 1.40
66 67 4.081697 TGGCATCAGTCTCACGAGAATAAA 60.082 41.667 0.00 0.00 39.48 1.40
67 68 4.870426 GGCATCAGTCTCACGAGAATAAAA 59.130 41.667 0.00 0.00 39.48 1.52
68 69 5.351465 GGCATCAGTCTCACGAGAATAAAAA 59.649 40.000 0.00 0.00 39.48 1.94
69 70 6.037610 GGCATCAGTCTCACGAGAATAAAAAT 59.962 38.462 0.00 0.00 39.48 1.82
70 71 7.122550 GCATCAGTCTCACGAGAATAAAAATC 58.877 38.462 0.00 0.00 39.48 2.17
71 72 7.625553 CATCAGTCTCACGAGAATAAAAATCC 58.374 38.462 0.00 0.00 39.48 3.01
72 73 6.106673 TCAGTCTCACGAGAATAAAAATCCC 58.893 40.000 0.00 0.00 39.48 3.85
73 74 5.874810 CAGTCTCACGAGAATAAAAATCCCA 59.125 40.000 0.00 0.00 39.48 4.37
74 75 6.540189 CAGTCTCACGAGAATAAAAATCCCAT 59.460 38.462 0.00 0.00 39.48 4.00
75 76 6.763610 AGTCTCACGAGAATAAAAATCCCATC 59.236 38.462 0.00 0.00 39.48 3.51
76 77 6.538742 GTCTCACGAGAATAAAAATCCCATCA 59.461 38.462 0.00 0.00 39.48 3.07
77 78 7.065803 GTCTCACGAGAATAAAAATCCCATCAA 59.934 37.037 0.00 0.00 39.48 2.57
78 79 7.609918 TCTCACGAGAATAAAAATCCCATCAAA 59.390 33.333 0.00 0.00 33.91 2.69
79 80 8.292444 TCACGAGAATAAAAATCCCATCAAAT 57.708 30.769 0.00 0.00 0.00 2.32
80 81 8.190122 TCACGAGAATAAAAATCCCATCAAATG 58.810 33.333 0.00 0.00 0.00 2.32
81 82 6.980397 ACGAGAATAAAAATCCCATCAAATGC 59.020 34.615 0.00 0.00 0.00 3.56
82 83 6.421801 CGAGAATAAAAATCCCATCAAATGCC 59.578 38.462 0.00 0.00 0.00 4.40
83 84 7.197901 AGAATAAAAATCCCATCAAATGCCA 57.802 32.000 0.00 0.00 0.00 4.92
84 85 7.808218 AGAATAAAAATCCCATCAAATGCCAT 58.192 30.769 0.00 0.00 0.00 4.40
85 86 7.717875 AGAATAAAAATCCCATCAAATGCCATG 59.282 33.333 0.00 0.00 0.00 3.66
86 87 4.847990 AAAATCCCATCAAATGCCATGT 57.152 36.364 0.00 0.00 0.00 3.21
87 88 4.411256 AAATCCCATCAAATGCCATGTC 57.589 40.909 0.00 0.00 0.00 3.06
88 89 1.779221 TCCCATCAAATGCCATGTCC 58.221 50.000 0.00 0.00 0.00 4.02
89 90 1.006878 TCCCATCAAATGCCATGTCCA 59.993 47.619 0.00 0.00 0.00 4.02
90 91 1.411246 CCCATCAAATGCCATGTCCAG 59.589 52.381 0.00 0.00 0.00 3.86
91 92 2.380941 CCATCAAATGCCATGTCCAGA 58.619 47.619 0.00 0.00 0.00 3.86
92 93 2.963101 CCATCAAATGCCATGTCCAGAT 59.037 45.455 0.00 0.00 0.00 2.90
93 94 3.243737 CCATCAAATGCCATGTCCAGATG 60.244 47.826 0.00 0.00 33.32 2.90
94 95 1.752498 TCAAATGCCATGTCCAGATGC 59.248 47.619 0.00 0.00 0.00 3.91
95 96 1.478916 CAAATGCCATGTCCAGATGCA 59.521 47.619 0.00 0.00 0.00 3.96
96 97 1.855295 AATGCCATGTCCAGATGCAA 58.145 45.000 0.00 0.00 0.00 4.08
97 98 1.855295 ATGCCATGTCCAGATGCAAA 58.145 45.000 0.00 0.00 0.00 3.68
98 99 1.855295 TGCCATGTCCAGATGCAAAT 58.145 45.000 0.00 0.00 0.00 2.32
99 100 1.478916 TGCCATGTCCAGATGCAAATG 59.521 47.619 0.00 0.00 0.00 2.32
100 101 1.805120 GCCATGTCCAGATGCAAATGC 60.805 52.381 0.00 0.00 42.50 3.56
101 102 1.202486 CCATGTCCAGATGCAAATGCC 60.202 52.381 2.46 0.00 41.18 4.40
102 103 1.117150 ATGTCCAGATGCAAATGCCC 58.883 50.000 2.46 0.00 41.18 5.36
103 104 0.040058 TGTCCAGATGCAAATGCCCT 59.960 50.000 2.46 0.00 41.18 5.19
104 105 0.743097 GTCCAGATGCAAATGCCCTC 59.257 55.000 2.46 0.24 41.18 4.30
105 106 0.627451 TCCAGATGCAAATGCCCTCT 59.373 50.000 2.46 2.61 41.18 3.69
106 107 1.006281 TCCAGATGCAAATGCCCTCTT 59.994 47.619 2.46 0.00 41.18 2.85
107 108 1.829222 CCAGATGCAAATGCCCTCTTT 59.171 47.619 2.46 0.00 41.18 2.52
108 109 2.235402 CCAGATGCAAATGCCCTCTTTT 59.765 45.455 2.46 0.00 41.18 2.27
109 110 3.307199 CCAGATGCAAATGCCCTCTTTTT 60.307 43.478 2.46 0.00 41.18 1.94
128 129 3.500448 TTTTTCCCATTTGCCTTTCCC 57.500 42.857 0.00 0.00 0.00 3.97
129 130 1.357137 TTTCCCATTTGCCTTTCCCC 58.643 50.000 0.00 0.00 0.00 4.81
130 131 0.546507 TTCCCATTTGCCTTTCCCCC 60.547 55.000 0.00 0.00 0.00 5.40
131 132 1.080907 CCCATTTGCCTTTCCCCCT 59.919 57.895 0.00 0.00 0.00 4.79
132 133 0.977627 CCCATTTGCCTTTCCCCCTC 60.978 60.000 0.00 0.00 0.00 4.30
133 134 0.252193 CCATTTGCCTTTCCCCCTCA 60.252 55.000 0.00 0.00 0.00 3.86
134 135 1.643310 CATTTGCCTTTCCCCCTCAA 58.357 50.000 0.00 0.00 0.00 3.02
135 136 1.977129 CATTTGCCTTTCCCCCTCAAA 59.023 47.619 0.00 0.00 0.00 2.69
136 137 2.182516 TTTGCCTTTCCCCCTCAAAA 57.817 45.000 0.00 0.00 0.00 2.44
137 138 2.414250 TTGCCTTTCCCCCTCAAAAT 57.586 45.000 0.00 0.00 0.00 1.82
138 139 1.937191 TGCCTTTCCCCCTCAAAATC 58.063 50.000 0.00 0.00 0.00 2.17
139 140 1.195115 GCCTTTCCCCCTCAAAATCC 58.805 55.000 0.00 0.00 0.00 3.01
140 141 1.273267 GCCTTTCCCCCTCAAAATCCT 60.273 52.381 0.00 0.00 0.00 3.24
141 142 2.739943 CCTTTCCCCCTCAAAATCCTC 58.260 52.381 0.00 0.00 0.00 3.71
142 143 2.624293 CCTTTCCCCCTCAAAATCCTCC 60.624 54.545 0.00 0.00 0.00 4.30
143 144 2.074922 TTCCCCCTCAAAATCCTCCT 57.925 50.000 0.00 0.00 0.00 3.69
144 145 2.982842 TCCCCCTCAAAATCCTCCTA 57.017 50.000 0.00 0.00 0.00 2.94
145 146 3.230143 TCCCCCTCAAAATCCTCCTAA 57.770 47.619 0.00 0.00 0.00 2.69
146 147 3.547903 TCCCCCTCAAAATCCTCCTAAA 58.452 45.455 0.00 0.00 0.00 1.85
147 148 3.268595 TCCCCCTCAAAATCCTCCTAAAC 59.731 47.826 0.00 0.00 0.00 2.01
148 149 3.627492 CCCCCTCAAAATCCTCCTAAACC 60.627 52.174 0.00 0.00 0.00 3.27
149 150 3.627492 CCCCTCAAAATCCTCCTAAACCC 60.627 52.174 0.00 0.00 0.00 4.11
150 151 3.269643 CCCTCAAAATCCTCCTAAACCCT 59.730 47.826 0.00 0.00 0.00 4.34
151 152 4.264397 CCCTCAAAATCCTCCTAAACCCTT 60.264 45.833 0.00 0.00 0.00 3.95
152 153 5.333581 CCTCAAAATCCTCCTAAACCCTTT 58.666 41.667 0.00 0.00 0.00 3.11
153 154 5.780282 CCTCAAAATCCTCCTAAACCCTTTT 59.220 40.000 0.00 0.00 0.00 2.27
154 155 6.071334 CCTCAAAATCCTCCTAAACCCTTTTC 60.071 42.308 0.00 0.00 0.00 2.29
155 156 6.620429 TCAAAATCCTCCTAAACCCTTTTCT 58.380 36.000 0.00 0.00 0.00 2.52
156 157 7.073208 TCAAAATCCTCCTAAACCCTTTTCTT 58.927 34.615 0.00 0.00 0.00 2.52
157 158 7.567250 TCAAAATCCTCCTAAACCCTTTTCTTT 59.433 33.333 0.00 0.00 0.00 2.52
158 159 7.540474 AAATCCTCCTAAACCCTTTTCTTTC 57.460 36.000 0.00 0.00 0.00 2.62
159 160 4.994282 TCCTCCTAAACCCTTTTCTTTCC 58.006 43.478 0.00 0.00 0.00 3.13
160 161 4.087182 CCTCCTAAACCCTTTTCTTTCCC 58.913 47.826 0.00 0.00 0.00 3.97
161 162 4.202684 CCTCCTAAACCCTTTTCTTTCCCT 60.203 45.833 0.00 0.00 0.00 4.20
162 163 4.994282 TCCTAAACCCTTTTCTTTCCCTC 58.006 43.478 0.00 0.00 0.00 4.30
163 164 4.668335 TCCTAAACCCTTTTCTTTCCCTCT 59.332 41.667 0.00 0.00 0.00 3.69
164 165 5.010933 CCTAAACCCTTTTCTTTCCCTCTC 58.989 45.833 0.00 0.00 0.00 3.20
165 166 3.527507 AACCCTTTTCTTTCCCTCTCC 57.472 47.619 0.00 0.00 0.00 3.71
166 167 2.719676 ACCCTTTTCTTTCCCTCTCCT 58.280 47.619 0.00 0.00 0.00 3.69
167 168 2.645297 ACCCTTTTCTTTCCCTCTCCTC 59.355 50.000 0.00 0.00 0.00 3.71
168 169 2.355209 CCCTTTTCTTTCCCTCTCCTCG 60.355 54.545 0.00 0.00 0.00 4.63
169 170 2.351455 CTTTTCTTTCCCTCTCCTCGC 58.649 52.381 0.00 0.00 0.00 5.03
170 171 0.613777 TTTCTTTCCCTCTCCTCGCC 59.386 55.000 0.00 0.00 0.00 5.54
171 172 0.252284 TTCTTTCCCTCTCCTCGCCT 60.252 55.000 0.00 0.00 0.00 5.52
172 173 0.252284 TCTTTCCCTCTCCTCGCCTT 60.252 55.000 0.00 0.00 0.00 4.35
173 174 0.615850 CTTTCCCTCTCCTCGCCTTT 59.384 55.000 0.00 0.00 0.00 3.11
174 175 0.613777 TTTCCCTCTCCTCGCCTTTC 59.386 55.000 0.00 0.00 0.00 2.62
175 176 1.265454 TTCCCTCTCCTCGCCTTTCC 61.265 60.000 0.00 0.00 0.00 3.13
176 177 2.736826 CCCTCTCCTCGCCTTTCCC 61.737 68.421 0.00 0.00 0.00 3.97
177 178 2.736826 CCTCTCCTCGCCTTTCCCC 61.737 68.421 0.00 0.00 0.00 4.81
178 179 1.990060 CTCTCCTCGCCTTTCCCCA 60.990 63.158 0.00 0.00 0.00 4.96
179 180 1.306997 TCTCCTCGCCTTTCCCCAT 60.307 57.895 0.00 0.00 0.00 4.00
180 181 1.147153 CTCCTCGCCTTTCCCCATC 59.853 63.158 0.00 0.00 0.00 3.51
181 182 1.615124 TCCTCGCCTTTCCCCATCA 60.615 57.895 0.00 0.00 0.00 3.07
182 183 1.452108 CCTCGCCTTTCCCCATCAC 60.452 63.158 0.00 0.00 0.00 3.06
183 184 1.452108 CTCGCCTTTCCCCATCACC 60.452 63.158 0.00 0.00 0.00 4.02
184 185 2.196997 CTCGCCTTTCCCCATCACCA 62.197 60.000 0.00 0.00 0.00 4.17
185 186 2.046285 CGCCTTTCCCCATCACCAC 61.046 63.158 0.00 0.00 0.00 4.16
186 187 1.384191 GCCTTTCCCCATCACCACT 59.616 57.895 0.00 0.00 0.00 4.00
187 188 0.681243 GCCTTTCCCCATCACCACTC 60.681 60.000 0.00 0.00 0.00 3.51
188 189 0.698238 CCTTTCCCCATCACCACTCA 59.302 55.000 0.00 0.00 0.00 3.41
189 190 1.614317 CCTTTCCCCATCACCACTCAC 60.614 57.143 0.00 0.00 0.00 3.51
190 191 0.404040 TTTCCCCATCACCACTCACC 59.596 55.000 0.00 0.00 0.00 4.02
191 192 1.497309 TTCCCCATCACCACTCACCC 61.497 60.000 0.00 0.00 0.00 4.61
192 193 2.230653 CCCCATCACCACTCACCCA 61.231 63.158 0.00 0.00 0.00 4.51
193 194 1.002134 CCCATCACCACTCACCCAC 60.002 63.158 0.00 0.00 0.00 4.61
194 195 1.492133 CCCATCACCACTCACCCACT 61.492 60.000 0.00 0.00 0.00 4.00
195 196 0.036010 CCATCACCACTCACCCACTC 60.036 60.000 0.00 0.00 0.00 3.51
196 197 0.036010 CATCACCACTCACCCACTCC 60.036 60.000 0.00 0.00 0.00 3.85
197 198 1.201429 ATCACCACTCACCCACTCCC 61.201 60.000 0.00 0.00 0.00 4.30
198 199 2.529389 ACCACTCACCCACTCCCC 60.529 66.667 0.00 0.00 0.00 4.81
199 200 3.330720 CCACTCACCCACTCCCCC 61.331 72.222 0.00 0.00 0.00 5.40
215 216 2.911552 CCCCCTCCCTCTCTATCTAC 57.088 60.000 0.00 0.00 0.00 2.59
216 217 1.359818 CCCCCTCCCTCTCTATCTACC 59.640 61.905 0.00 0.00 0.00 3.18
217 218 2.364190 CCCCTCCCTCTCTATCTACCT 58.636 57.143 0.00 0.00 0.00 3.08
218 219 2.310647 CCCCTCCCTCTCTATCTACCTC 59.689 59.091 0.00 0.00 0.00 3.85
219 220 2.310647 CCCTCCCTCTCTATCTACCTCC 59.689 59.091 0.00 0.00 0.00 4.30
220 221 3.265489 CCTCCCTCTCTATCTACCTCCT 58.735 54.545 0.00 0.00 0.00 3.69
221 222 3.660669 CCTCCCTCTCTATCTACCTCCTT 59.339 52.174 0.00 0.00 0.00 3.36
222 223 4.263771 CCTCCCTCTCTATCTACCTCCTTC 60.264 54.167 0.00 0.00 0.00 3.46
223 224 3.658705 TCCCTCTCTATCTACCTCCTTCC 59.341 52.174 0.00 0.00 0.00 3.46
224 225 3.560453 CCCTCTCTATCTACCTCCTTCCG 60.560 56.522 0.00 0.00 0.00 4.30
742 743 0.258774 ACAGGCCTCTCTCTCTCTCC 59.741 60.000 0.00 0.00 0.00 3.71
744 745 1.152546 GGCCTCTCTCTCTCTCCCC 60.153 68.421 0.00 0.00 0.00 4.81
839 843 2.672098 AGTCACCACTGTCAGTTCTCT 58.328 47.619 1.67 0.00 0.00 3.10
840 844 2.625790 AGTCACCACTGTCAGTTCTCTC 59.374 50.000 1.67 0.00 0.00 3.20
841 845 1.964223 TCACCACTGTCAGTTCTCTCC 59.036 52.381 1.67 0.00 0.00 3.71
842 846 1.001406 CACCACTGTCAGTTCTCTCCC 59.999 57.143 1.67 0.00 0.00 4.30
843 847 1.133009 ACCACTGTCAGTTCTCTCCCT 60.133 52.381 1.67 0.00 0.00 4.20
844 848 1.548269 CCACTGTCAGTTCTCTCCCTC 59.452 57.143 1.67 0.00 0.00 4.30
845 849 2.524306 CACTGTCAGTTCTCTCCCTCT 58.476 52.381 1.67 0.00 0.00 3.69
846 850 2.896685 CACTGTCAGTTCTCTCCCTCTT 59.103 50.000 1.67 0.00 0.00 2.85
847 851 3.056891 CACTGTCAGTTCTCTCCCTCTTC 60.057 52.174 1.67 0.00 0.00 2.87
848 852 2.495669 CTGTCAGTTCTCTCCCTCTTCC 59.504 54.545 0.00 0.00 0.00 3.46
849 853 2.110899 TGTCAGTTCTCTCCCTCTTCCT 59.889 50.000 0.00 0.00 0.00 3.36
896 900 4.451150 TTTCCGCGATCGCTGGCT 62.451 61.111 34.69 0.00 39.32 4.75
1175 1197 4.074526 GCTGGCTCTGGCTGACGA 62.075 66.667 0.00 0.00 38.73 4.20
1325 1376 4.193893 TGCTGCTGCACCAGTGGT 62.194 61.111 14.93 9.70 45.31 4.16
1425 1476 2.752903 GGTTTGTGCCGTATTTCTGGAT 59.247 45.455 0.00 0.00 0.00 3.41
1555 1612 1.303561 TCCTGAGGCAATGTGGTGC 60.304 57.895 0.00 0.00 44.14 5.01
1632 1689 4.475944 CTTTCAGTTAGGATTTGGTTGCG 58.524 43.478 0.00 0.00 0.00 4.85
1660 1717 1.392589 AATGCAGGATAAAGGCGTGG 58.607 50.000 0.00 0.00 0.00 4.94
1705 1762 3.001736 GTGGATGCGAGCTTTGATCTAAC 59.998 47.826 0.00 0.00 0.00 2.34
1709 1766 2.416547 TGCGAGCTTTGATCTAACTTGC 59.583 45.455 16.85 16.85 38.09 4.01
1794 1851 2.095466 TGTAAAATGTGGCTAACTGCGC 60.095 45.455 0.00 0.00 44.05 6.09
1863 1920 1.066430 TGGATTGCGTCTCCAAGTACC 60.066 52.381 0.00 0.00 39.83 3.34
1872 1929 3.306780 CGTCTCCAAGTACCTGATTTGGT 60.307 47.826 9.84 0.00 43.72 3.67
1877 1934 4.825085 TCCAAGTACCTGATTTGGTTGTTC 59.175 41.667 9.84 0.00 43.72 3.18
2164 2222 5.795766 ACGCAATGTACGTCAATTATTCTG 58.204 37.500 0.00 0.00 40.28 3.02
2180 2238 9.807649 CAATTATTCTGTAAATTCCTTTCCCTG 57.192 33.333 0.00 0.00 0.00 4.45
2729 2791 0.329596 AACTCACTGGAAGCATCCCC 59.670 55.000 5.34 0.00 45.95 4.81
2983 3045 5.741011 TGTTACTCGCCCTTAATCTTCATT 58.259 37.500 0.00 0.00 0.00 2.57
3058 3120 3.243501 CCAACAACTTCAGTGGTCCATTG 60.244 47.826 8.06 8.06 29.14 2.82
3067 3129 1.145738 AGTGGTCCATTGCCAACTTCT 59.854 47.619 0.00 0.00 37.81 2.85
3216 3278 5.545723 AGATAATCAACTATCTGGGACCCTG 59.454 44.000 13.00 12.03 37.27 4.45
3405 3467 8.786826 TTTCTTTCGGTCATTGTATAGACATT 57.213 30.769 0.00 0.00 36.50 2.71
3422 3484 8.922058 ATAGACATTGAATTTGACTGCAATTC 57.078 30.769 1.80 1.80 33.25 2.17
3897 3969 3.937814 ACTGTCGATCCAGTTTGCAATA 58.062 40.909 0.00 0.00 42.99 1.90
3917 3989 7.082602 GCAATACAGATCATTGATAGCTTTGG 58.917 38.462 8.11 0.00 35.77 3.28
3952 4024 7.138081 TGCATACAAATATATCCGCTTTGTTG 58.862 34.615 6.69 6.67 41.77 3.33
4023 4095 1.485066 GGACCGATTCCTCCAAAGCTA 59.515 52.381 0.00 0.00 41.95 3.32
4232 4307 0.037232 CCTTCCACGTCACCCTCTTC 60.037 60.000 0.00 0.00 0.00 2.87
4327 4402 3.579534 ATACACCCTCGAGCTCTTCTA 57.420 47.619 12.85 0.00 0.00 2.10
4730 4814 3.721969 TGGCCATACCAGGTACAGA 57.278 52.632 0.00 0.00 46.36 3.41
4731 4815 2.190398 TGGCCATACCAGGTACAGAT 57.810 50.000 0.00 0.00 46.36 2.90
4732 4816 3.338110 TGGCCATACCAGGTACAGATA 57.662 47.619 0.00 0.00 46.36 1.98
4851 4935 3.515104 AGAAGCCTCCTGAAAAGAGAGAG 59.485 47.826 0.00 0.00 32.86 3.20
5258 5399 8.150945 GCTGTCCTCATCTTGTTTTATCCTATA 58.849 37.037 0.00 0.00 0.00 1.31
5612 5753 5.070313 GGGGCTGCCTTCATATTTAAAATCA 59.930 40.000 19.68 0.00 0.00 2.57
5701 5842 5.279384 CAGCCAATGTGCTTCTTGATAATC 58.721 41.667 0.00 0.00 40.32 1.75
5790 5931 6.988580 AGGTAACCTCAAGTGTTAGTTGTAAC 59.011 38.462 0.00 0.00 37.14 2.50
5924 6066 8.478877 GTCAAGATCTTAATCCTTTAGTCCTGA 58.521 37.037 7.86 0.00 31.78 3.86
5954 6096 5.922053 TGACAATGAGTTCATGGAGGATAG 58.078 41.667 3.54 0.00 36.56 2.08
6232 6390 3.250762 TGTTCAGTTGATTTCCAGCTTCG 59.749 43.478 0.00 0.00 33.84 3.79
6250 6408 2.954316 TCGTCGTGCATGAACATACTT 58.046 42.857 10.93 0.00 0.00 2.24
6404 7842 6.434018 TGAAAGGCAATTGGAAAACAAAAG 57.566 33.333 7.72 0.00 43.46 2.27
6477 7915 3.006752 TGCTTCTGCATTTGTTTTAGGGG 59.993 43.478 0.00 0.00 45.31 4.79
6550 7988 9.587772 CTATAATATATGGGTACTCACAGTTGC 57.412 37.037 0.00 0.00 0.00 4.17
6855 8293 0.802222 CTCGTCCGCGACATGAACAT 60.802 55.000 8.23 0.00 42.81 2.71
6889 8327 1.559682 GGGCCCAGTCTCAGTTTCATA 59.440 52.381 19.95 0.00 0.00 2.15
7166 8608 8.691797 GCCATTATTTTCTTGGTGTCCTATAAA 58.308 33.333 0.00 0.00 32.90 1.40
7225 8668 5.924254 CGTTTCCGAGGACAGCAATATAATA 59.076 40.000 0.00 0.00 35.63 0.98
7232 8675 7.984050 CCGAGGACAGCAATATAATAAGATGAT 59.016 37.037 0.00 0.00 0.00 2.45
7285 8728 0.323725 ATGCAGCCGGAACCAGAATT 60.324 50.000 5.05 0.00 0.00 2.17
7556 9003 0.550147 CTTTTGGGGAGGAGGGAGGA 60.550 60.000 0.00 0.00 0.00 3.71
7805 9277 7.093289 ACTCTTAATGCTGTTGTAGTCTGGTAT 60.093 37.037 0.00 0.00 0.00 2.73
7849 9321 1.632409 AGTCCCTCACTTGACATGCAT 59.368 47.619 0.00 0.00 33.89 3.96
7852 9324 1.460504 CCTCACTTGACATGCATGCT 58.539 50.000 26.53 13.62 0.00 3.79
7853 9325 1.132453 CCTCACTTGACATGCATGCTG 59.868 52.381 26.53 16.29 0.00 4.41
7855 9327 2.228103 CTCACTTGACATGCATGCTGTT 59.772 45.455 26.53 6.94 0.00 3.16
7856 9328 2.227149 TCACTTGACATGCATGCTGTTC 59.773 45.455 26.53 16.33 0.00 3.18
7859 9331 2.785540 TGACATGCATGCTGTTCCTA 57.214 45.000 26.53 0.00 0.00 2.94
7860 9332 3.070476 TGACATGCATGCTGTTCCTAA 57.930 42.857 26.53 0.00 0.00 2.69
7861 9333 3.419943 TGACATGCATGCTGTTCCTAAA 58.580 40.909 26.53 0.00 0.00 1.85
7862 9334 4.018490 TGACATGCATGCTGTTCCTAAAT 58.982 39.130 26.53 1.90 0.00 1.40
7863 9335 5.192176 TGACATGCATGCTGTTCCTAAATA 58.808 37.500 26.53 0.00 0.00 1.40
7865 9337 6.321945 TGACATGCATGCTGTTCCTAAATATT 59.678 34.615 26.53 0.48 0.00 1.28
7866 9338 7.116075 ACATGCATGCTGTTCCTAAATATTT 57.884 32.000 26.53 5.89 0.00 1.40
7867 9339 6.982141 ACATGCATGCTGTTCCTAAATATTTG 59.018 34.615 26.53 0.00 0.00 2.32
7869 9341 6.563422 TGCATGCTGTTCCTAAATATTTGTC 58.437 36.000 20.33 0.00 0.00 3.18
7872 9344 7.761249 GCATGCTGTTCCTAAATATTTGTCTTT 59.239 33.333 11.37 0.00 0.00 2.52
7873 9345 9.294030 CATGCTGTTCCTAAATATTTGTCTTTC 57.706 33.333 11.05 0.00 0.00 2.62
7874 9346 8.635765 TGCTGTTCCTAAATATTTGTCTTTCT 57.364 30.769 11.05 0.00 0.00 2.52
7909 9381 9.998106 AATAAGTGACTATATACGGAGCAAAAT 57.002 29.630 0.00 0.00 0.00 1.82
7910 9382 7.715265 AAGTGACTATATACGGAGCAAAATG 57.285 36.000 0.00 0.00 0.00 2.32
7911 9383 7.050970 AGTGACTATATACGGAGCAAAATGA 57.949 36.000 0.00 0.00 0.00 2.57
7912 9384 7.148641 AGTGACTATATACGGAGCAAAATGAG 58.851 38.462 0.00 0.00 0.00 2.90
7913 9385 6.924060 GTGACTATATACGGAGCAAAATGAGT 59.076 38.462 0.00 0.00 0.00 3.41
7914 9386 6.923508 TGACTATATACGGAGCAAAATGAGTG 59.076 38.462 0.00 0.00 0.00 3.51
7915 9387 7.050970 ACTATATACGGAGCAAAATGAGTGA 57.949 36.000 0.00 0.00 0.00 3.41
7916 9388 7.497595 ACTATATACGGAGCAAAATGAGTGAA 58.502 34.615 0.00 0.00 0.00 3.18
7917 9389 8.150945 ACTATATACGGAGCAAAATGAGTGAAT 58.849 33.333 0.00 0.00 0.00 2.57
7918 9390 5.741388 ATACGGAGCAAAATGAGTGAATC 57.259 39.130 0.00 0.00 0.00 2.52
7919 9391 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
7920 9392 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
7921 9393 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
7922 9394 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
7923 9395 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
7958 9430 9.696572 ATTCTATATACATCCGTATGTGGTAGT 57.303 33.333 3.56 0.00 45.99 2.73
7959 9431 8.728337 TCTATATACATCCGTATGTGGTAGTC 57.272 38.462 3.56 0.00 45.99 2.59
7960 9432 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
7961 9433 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
7962 9434 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
7963 9435 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
7964 9436 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
7965 9437 5.364446 ACATCCGTATGTGGTAGTCCATTTA 59.636 40.000 0.00 0.00 44.79 1.40
7966 9438 5.936187 TCCGTATGTGGTAGTCCATTTAA 57.064 39.130 0.00 0.00 46.20 1.52
7967 9439 6.297080 TCCGTATGTGGTAGTCCATTTAAA 57.703 37.500 0.00 0.00 46.20 1.52
7968 9440 6.709281 TCCGTATGTGGTAGTCCATTTAAAA 58.291 36.000 0.00 0.00 46.20 1.52
7969 9441 7.340256 TCCGTATGTGGTAGTCCATTTAAAAT 58.660 34.615 0.00 0.00 46.20 1.82
7970 9442 7.496591 TCCGTATGTGGTAGTCCATTTAAAATC 59.503 37.037 0.00 0.00 46.20 2.17
7971 9443 7.497909 CCGTATGTGGTAGTCCATTTAAAATCT 59.502 37.037 0.00 0.00 46.20 2.40
7972 9444 8.548721 CGTATGTGGTAGTCCATTTAAAATCTC 58.451 37.037 0.00 0.00 46.20 2.75
7973 9445 9.614792 GTATGTGGTAGTCCATTTAAAATCTCT 57.385 33.333 0.00 0.00 46.20 3.10
7982 9454 9.793259 AGTCCATTTAAAATCTCTAAACAGACA 57.207 29.630 0.00 0.00 31.85 3.41
7997 9469 9.158233 TCTAAACAGACAAATATTTAGGAACGG 57.842 33.333 0.00 0.00 35.99 4.44
7998 9470 7.989416 AAACAGACAAATATTTAGGAACGGA 57.011 32.000 0.00 0.00 0.00 4.69
7999 9471 7.611213 AACAGACAAATATTTAGGAACGGAG 57.389 36.000 0.00 0.00 0.00 4.63
8000 9472 6.113411 ACAGACAAATATTTAGGAACGGAGG 58.887 40.000 0.00 0.00 0.00 4.30
8001 9473 5.527582 CAGACAAATATTTAGGAACGGAGGG 59.472 44.000 0.00 0.00 0.00 4.30
8002 9474 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
8003 9475 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
8004 9476 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
8038 9510 1.073284 GAGGCAAAAGTACCCAGTCCA 59.927 52.381 0.00 0.00 0.00 4.02
8039 9511 1.202891 AGGCAAAAGTACCCAGTCCAC 60.203 52.381 0.00 0.00 0.00 4.02
8040 9512 1.477923 GGCAAAAGTACCCAGTCCACA 60.478 52.381 0.00 0.00 0.00 4.17
8041 9513 2.303175 GCAAAAGTACCCAGTCCACAA 58.697 47.619 0.00 0.00 0.00 3.33
8042 9514 2.691011 GCAAAAGTACCCAGTCCACAAA 59.309 45.455 0.00 0.00 0.00 2.83
8043 9515 3.490249 GCAAAAGTACCCAGTCCACAAAC 60.490 47.826 0.00 0.00 0.00 2.93
8044 9516 3.655615 AAAGTACCCAGTCCACAAACA 57.344 42.857 0.00 0.00 0.00 2.83
8045 9517 3.876309 AAGTACCCAGTCCACAAACAT 57.124 42.857 0.00 0.00 0.00 2.71
8046 9518 3.418684 AGTACCCAGTCCACAAACATC 57.581 47.619 0.00 0.00 0.00 3.06
8047 9519 2.073816 GTACCCAGTCCACAAACATCG 58.926 52.381 0.00 0.00 0.00 3.84
8048 9520 0.889186 ACCCAGTCCACAAACATCGC 60.889 55.000 0.00 0.00 0.00 4.58
8049 9521 0.606401 CCCAGTCCACAAACATCGCT 60.606 55.000 0.00 0.00 0.00 4.93
8050 9522 0.798776 CCAGTCCACAAACATCGCTC 59.201 55.000 0.00 0.00 0.00 5.03
8051 9523 1.511850 CAGTCCACAAACATCGCTCA 58.488 50.000 0.00 0.00 0.00 4.26
8052 9524 1.195448 CAGTCCACAAACATCGCTCAC 59.805 52.381 0.00 0.00 0.00 3.51
8053 9525 1.202639 AGTCCACAAACATCGCTCACA 60.203 47.619 0.00 0.00 0.00 3.58
8054 9526 1.806542 GTCCACAAACATCGCTCACAT 59.193 47.619 0.00 0.00 0.00 3.21
8055 9527 1.805943 TCCACAAACATCGCTCACATG 59.194 47.619 0.00 0.00 0.00 3.21
8056 9528 1.609932 CACAAACATCGCTCACATGC 58.390 50.000 0.00 0.00 0.00 4.06
8057 9529 1.069091 CACAAACATCGCTCACATGCA 60.069 47.619 0.00 0.00 0.00 3.96
8058 9530 1.069022 ACAAACATCGCTCACATGCAC 60.069 47.619 0.00 0.00 0.00 4.57
8059 9531 0.523072 AAACATCGCTCACATGCACC 59.477 50.000 0.00 0.00 0.00 5.01
8060 9532 0.321919 AACATCGCTCACATGCACCT 60.322 50.000 0.00 0.00 0.00 4.00
8061 9533 0.321919 ACATCGCTCACATGCACCTT 60.322 50.000 0.00 0.00 0.00 3.50
8062 9534 0.806868 CATCGCTCACATGCACCTTT 59.193 50.000 0.00 0.00 0.00 3.11
8063 9535 1.200716 CATCGCTCACATGCACCTTTT 59.799 47.619 0.00 0.00 0.00 2.27
8064 9536 0.592637 TCGCTCACATGCACCTTTTG 59.407 50.000 0.00 0.00 0.00 2.44
8129 9601 6.900568 TTTTGTCAACAAACATTGATGGTC 57.099 33.333 7.78 0.00 44.56 4.02
8130 9602 5.588958 TTGTCAACAAACATTGATGGTCA 57.411 34.783 0.00 0.00 40.60 4.02
8131 9603 4.930963 TGTCAACAAACATTGATGGTCAC 58.069 39.130 0.00 0.00 40.60 3.67
8132 9604 4.400567 TGTCAACAAACATTGATGGTCACA 59.599 37.500 0.00 0.00 40.60 3.58
8133 9605 5.068855 TGTCAACAAACATTGATGGTCACAT 59.931 36.000 0.00 0.00 40.60 3.21
8134 9606 8.159075 TTGTCAACAAACATTGATGGTCACATC 61.159 37.037 0.93 0.93 42.14 3.06
8149 9621 8.680039 ATGGTCACATCAAAATCAACAAAATT 57.320 26.923 0.00 0.00 29.20 1.82
8150 9622 7.917597 TGGTCACATCAAAATCAACAAAATTG 58.082 30.769 0.00 0.00 0.00 2.32
8151 9623 7.767659 TGGTCACATCAAAATCAACAAAATTGA 59.232 29.630 0.00 0.00 34.80 2.57
8152 9624 8.277713 GGTCACATCAAAATCAACAAAATTGAG 58.722 33.333 0.00 0.00 33.91 3.02
8153 9625 8.277713 GTCACATCAAAATCAACAAAATTGAGG 58.722 33.333 0.00 0.00 37.68 3.86
8154 9626 7.041916 TCACATCAAAATCAACAAAATTGAGGC 60.042 33.333 0.00 0.00 35.79 4.70
8155 9627 6.993902 ACATCAAAATCAACAAAATTGAGGCT 59.006 30.769 0.00 0.00 35.79 4.58
8156 9628 7.172019 ACATCAAAATCAACAAAATTGAGGCTC 59.828 33.333 7.79 7.79 35.79 4.70
8157 9629 5.990996 TCAAAATCAACAAAATTGAGGCTCC 59.009 36.000 12.86 0.00 0.00 4.70
8158 9630 5.549742 AAATCAACAAAATTGAGGCTCCA 57.450 34.783 12.86 0.12 0.00 3.86
8159 9631 5.549742 AATCAACAAAATTGAGGCTCCAA 57.450 34.783 12.86 6.93 0.00 3.53
8160 9632 5.549742 ATCAACAAAATTGAGGCTCCAAA 57.450 34.783 12.86 0.22 0.00 3.28
8161 9633 5.350504 TCAACAAAATTGAGGCTCCAAAA 57.649 34.783 12.86 0.00 0.00 2.44
8162 9634 5.927819 TCAACAAAATTGAGGCTCCAAAAT 58.072 33.333 12.86 2.19 0.00 1.82
8163 9635 5.759273 TCAACAAAATTGAGGCTCCAAAATG 59.241 36.000 12.86 8.44 0.00 2.32
8164 9636 4.067192 ACAAAATTGAGGCTCCAAAATGC 58.933 39.130 12.86 0.00 0.00 3.56
8165 9637 4.202388 ACAAAATTGAGGCTCCAAAATGCT 60.202 37.500 12.86 0.00 0.00 3.79
8166 9638 4.628963 AAATTGAGGCTCCAAAATGCTT 57.371 36.364 12.86 0.00 0.00 3.91
8167 9639 4.628963 AATTGAGGCTCCAAAATGCTTT 57.371 36.364 12.86 0.00 0.00 3.51
8168 9640 5.743636 AATTGAGGCTCCAAAATGCTTTA 57.256 34.783 12.86 0.00 0.00 1.85
8169 9641 5.743636 ATTGAGGCTCCAAAATGCTTTAA 57.256 34.783 12.86 0.00 0.00 1.52
8170 9642 5.543507 TTGAGGCTCCAAAATGCTTTAAA 57.456 34.783 12.86 0.00 0.00 1.52
8171 9643 5.543507 TGAGGCTCCAAAATGCTTTAAAA 57.456 34.783 12.86 0.00 0.00 1.52
8172 9644 5.923204 TGAGGCTCCAAAATGCTTTAAAAA 58.077 33.333 12.86 0.00 0.00 1.94
8192 9664 5.596836 AAAACAGTTTCTTTGGAGCATGA 57.403 34.783 0.00 0.00 0.00 3.07
8193 9665 5.796424 AAACAGTTTCTTTGGAGCATGAT 57.204 34.783 0.00 0.00 0.00 2.45
8194 9666 5.796424 AACAGTTTCTTTGGAGCATGATT 57.204 34.783 0.00 0.00 0.00 2.57
8195 9667 5.796424 ACAGTTTCTTTGGAGCATGATTT 57.204 34.783 0.00 0.00 0.00 2.17
8196 9668 6.165700 ACAGTTTCTTTGGAGCATGATTTT 57.834 33.333 0.00 0.00 0.00 1.82
8197 9669 5.987347 ACAGTTTCTTTGGAGCATGATTTTG 59.013 36.000 0.00 0.00 0.00 2.44
8198 9670 4.992951 AGTTTCTTTGGAGCATGATTTTGC 59.007 37.500 0.00 0.00 43.09 3.68
8228 9700 9.912634 TTTCCTCTAAAAATGTCATTTCATCAC 57.087 29.630 11.19 0.00 0.00 3.06
8229 9701 8.634335 TCCTCTAAAAATGTCATTTCATCACA 57.366 30.769 11.19 0.00 0.00 3.58
8230 9702 9.076781 TCCTCTAAAAATGTCATTTCATCACAA 57.923 29.630 11.19 0.00 0.00 3.33
8231 9703 9.695526 CCTCTAAAAATGTCATTTCATCACAAA 57.304 29.630 11.19 0.00 0.00 2.83
8239 9711 8.890124 ATGTCATTTCATCACAAAAATTGACA 57.110 26.923 11.90 11.90 37.34 3.58
8240 9712 8.890124 TGTCATTTCATCACAAAAATTGACAT 57.110 26.923 0.00 0.00 33.33 3.06
8241 9713 8.766151 TGTCATTTCATCACAAAAATTGACATG 58.234 29.630 0.00 0.00 33.33 3.21
8242 9714 7.742963 GTCATTTCATCACAAAAATTGACATGC 59.257 33.333 0.00 0.00 30.22 4.06
8243 9715 7.441458 TCATTTCATCACAAAAATTGACATGCA 59.559 29.630 0.00 0.00 30.22 3.96
8244 9716 7.731882 TTTCATCACAAAAATTGACATGCAT 57.268 28.000 0.00 0.00 0.00 3.96
8245 9717 6.713792 TCATCACAAAAATTGACATGCATG 57.286 33.333 25.09 25.09 0.00 4.06
8246 9718 6.224584 TCATCACAAAAATTGACATGCATGT 58.775 32.000 31.82 31.82 45.16 3.21
8247 9719 5.908916 TCACAAAAATTGACATGCATGTG 57.091 34.783 35.92 20.55 41.95 3.21
8248 9720 5.598769 TCACAAAAATTGACATGCATGTGA 58.401 33.333 35.92 26.18 41.95 3.58
8249 9721 6.047231 TCACAAAAATTGACATGCATGTGAA 58.953 32.000 35.92 32.55 41.87 3.18
8250 9722 6.537660 TCACAAAAATTGACATGCATGTGAAA 59.462 30.769 35.92 27.23 41.87 2.69
8251 9723 6.629649 CACAAAAATTGACATGCATGTGAAAC 59.370 34.615 35.92 21.38 41.95 2.78
8272 9744 5.843673 ACACACATCAATGTTTGTTACCA 57.156 34.783 8.69 0.00 46.18 3.25
8273 9745 6.214191 ACACACATCAATGTTTGTTACCAA 57.786 33.333 8.69 0.00 46.18 3.67
8274 9746 6.634805 ACACACATCAATGTTTGTTACCAAA 58.365 32.000 8.69 0.00 46.18 3.28
8275 9747 7.099764 ACACACATCAATGTTTGTTACCAAAA 58.900 30.769 8.69 0.00 46.18 2.44
8276 9748 7.604164 ACACACATCAATGTTTGTTACCAAAAA 59.396 29.630 8.69 0.00 46.18 1.94
8337 9809 7.801716 TTGATATTACTACATCAAAGGGTGC 57.198 36.000 0.00 0.00 38.02 5.01
8338 9810 6.894682 TGATATTACTACATCAAAGGGTGCA 58.105 36.000 0.00 0.00 0.00 4.57
8339 9811 7.517320 TGATATTACTACATCAAAGGGTGCAT 58.483 34.615 0.00 0.00 0.00 3.96
8340 9812 7.445096 TGATATTACTACATCAAAGGGTGCATG 59.555 37.037 0.00 0.00 0.00 4.06
8341 9813 3.439857 ACTACATCAAAGGGTGCATGT 57.560 42.857 0.00 0.00 34.46 3.21
8342 9814 3.084039 ACTACATCAAAGGGTGCATGTG 58.916 45.455 0.00 0.00 33.13 3.21
8343 9815 2.291209 ACATCAAAGGGTGCATGTGA 57.709 45.000 0.00 0.00 31.13 3.58
8344 9816 2.596346 ACATCAAAGGGTGCATGTGAA 58.404 42.857 0.00 0.00 31.13 3.18
8345 9817 2.297033 ACATCAAAGGGTGCATGTGAAC 59.703 45.455 0.00 0.00 31.13 3.18
8346 9818 2.363306 TCAAAGGGTGCATGTGAACT 57.637 45.000 0.00 0.00 0.00 3.01
8347 9819 2.229792 TCAAAGGGTGCATGTGAACTC 58.770 47.619 0.00 0.00 0.00 3.01
8348 9820 1.955778 CAAAGGGTGCATGTGAACTCA 59.044 47.619 0.00 0.00 0.00 3.41
8349 9821 1.901591 AAGGGTGCATGTGAACTCAG 58.098 50.000 0.00 0.00 0.00 3.35
8350 9822 1.059098 AGGGTGCATGTGAACTCAGA 58.941 50.000 0.00 0.00 0.00 3.27
8351 9823 1.002888 AGGGTGCATGTGAACTCAGAG 59.997 52.381 0.00 0.00 0.00 3.35
8352 9824 0.801251 GGTGCATGTGAACTCAGAGC 59.199 55.000 0.00 0.00 0.00 4.09
8353 9825 1.610102 GGTGCATGTGAACTCAGAGCT 60.610 52.381 0.00 0.00 0.00 4.09
8354 9826 1.731160 GTGCATGTGAACTCAGAGCTC 59.269 52.381 5.27 5.27 0.00 4.09
8355 9827 1.345415 TGCATGTGAACTCAGAGCTCA 59.655 47.619 17.77 0.00 0.00 4.26
8356 9828 1.731160 GCATGTGAACTCAGAGCTCAC 59.269 52.381 22.36 22.36 39.93 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.512914 GATGGGGGCCCTGCTGAC 62.513 72.222 24.38 4.69 36.94 3.51
8 9 4.739738 AAAGGGGATGGGGGCCCT 62.740 66.667 24.38 2.24 45.30 5.19
9 10 4.157660 GAAAGGGGATGGGGGCCC 62.158 72.222 15.76 15.76 45.25 5.80
10 11 4.157660 GGAAAGGGGATGGGGGCC 62.158 72.222 0.00 0.00 0.00 5.80
11 12 4.157660 GGGAAAGGGGATGGGGGC 62.158 72.222 0.00 0.00 0.00 5.80
12 13 3.438812 GGGGAAAGGGGATGGGGG 61.439 72.222 0.00 0.00 0.00 5.40
13 14 2.287975 AGGGGAAAGGGGATGGGG 60.288 66.667 0.00 0.00 0.00 4.96
14 15 3.018901 CAGGGGAAAGGGGATGGG 58.981 66.667 0.00 0.00 0.00 4.00
15 16 2.280079 GCAGGGGAAAGGGGATGG 59.720 66.667 0.00 0.00 0.00 3.51
16 17 1.380380 GTGCAGGGGAAAGGGGATG 60.380 63.158 0.00 0.00 0.00 3.51
17 18 2.983879 CGTGCAGGGGAAAGGGGAT 61.984 63.158 0.00 0.00 0.00 3.85
18 19 3.646715 CGTGCAGGGGAAAGGGGA 61.647 66.667 0.00 0.00 0.00 4.81
19 20 4.740822 CCGTGCAGGGGAAAGGGG 62.741 72.222 17.92 0.00 35.97 4.79
39 40 1.448540 GTGAGACTGATGCCACCGG 60.449 63.158 0.00 0.00 0.00 5.28
40 41 1.807165 CGTGAGACTGATGCCACCG 60.807 63.158 0.00 0.00 0.00 4.94
41 42 0.459237 CTCGTGAGACTGATGCCACC 60.459 60.000 0.00 0.00 35.39 4.61
42 43 0.528017 TCTCGTGAGACTGATGCCAC 59.472 55.000 0.00 0.00 35.39 5.01
43 44 1.256812 TTCTCGTGAGACTGATGCCA 58.743 50.000 0.00 0.00 37.14 4.92
44 45 2.593346 ATTCTCGTGAGACTGATGCC 57.407 50.000 0.00 0.00 37.14 4.40
45 46 6.408858 TTTTTATTCTCGTGAGACTGATGC 57.591 37.500 0.00 0.00 37.14 3.91
46 47 7.254590 GGGATTTTTATTCTCGTGAGACTGATG 60.255 40.741 0.00 0.00 37.14 3.07
47 48 6.763610 GGGATTTTTATTCTCGTGAGACTGAT 59.236 38.462 0.00 0.00 37.14 2.90
48 49 6.106673 GGGATTTTTATTCTCGTGAGACTGA 58.893 40.000 0.00 0.00 37.14 3.41
49 50 5.874810 TGGGATTTTTATTCTCGTGAGACTG 59.125 40.000 0.00 0.00 37.14 3.51
50 51 6.049955 TGGGATTTTTATTCTCGTGAGACT 57.950 37.500 0.00 0.00 37.14 3.24
51 52 6.538742 TGATGGGATTTTTATTCTCGTGAGAC 59.461 38.462 0.00 0.00 37.14 3.36
52 53 6.649155 TGATGGGATTTTTATTCTCGTGAGA 58.351 36.000 0.00 0.00 39.12 3.27
53 54 6.925610 TGATGGGATTTTTATTCTCGTGAG 57.074 37.500 0.00 0.00 0.00 3.51
54 55 7.695480 TTTGATGGGATTTTTATTCTCGTGA 57.305 32.000 0.00 0.00 0.00 4.35
55 56 7.043192 GCATTTGATGGGATTTTTATTCTCGTG 60.043 37.037 0.00 0.00 0.00 4.35
56 57 6.980397 GCATTTGATGGGATTTTTATTCTCGT 59.020 34.615 0.00 0.00 0.00 4.18
57 58 6.421801 GGCATTTGATGGGATTTTTATTCTCG 59.578 38.462 0.00 0.00 0.00 4.04
58 59 7.274447 TGGCATTTGATGGGATTTTTATTCTC 58.726 34.615 0.00 0.00 0.00 2.87
59 60 7.197901 TGGCATTTGATGGGATTTTTATTCT 57.802 32.000 0.00 0.00 0.00 2.40
60 61 7.499895 ACATGGCATTTGATGGGATTTTTATTC 59.500 33.333 0.00 0.00 0.00 1.75
61 62 7.348033 ACATGGCATTTGATGGGATTTTTATT 58.652 30.769 0.00 0.00 0.00 1.40
62 63 6.902408 ACATGGCATTTGATGGGATTTTTAT 58.098 32.000 0.00 0.00 0.00 1.40
63 64 6.310764 ACATGGCATTTGATGGGATTTTTA 57.689 33.333 0.00 0.00 0.00 1.52
64 65 5.182169 ACATGGCATTTGATGGGATTTTT 57.818 34.783 0.00 0.00 0.00 1.94
65 66 4.384427 GGACATGGCATTTGATGGGATTTT 60.384 41.667 0.00 0.00 0.00 1.82
66 67 3.135167 GGACATGGCATTTGATGGGATTT 59.865 43.478 0.00 0.00 0.00 2.17
67 68 2.701951 GGACATGGCATTTGATGGGATT 59.298 45.455 0.00 0.00 0.00 3.01
68 69 2.322658 GGACATGGCATTTGATGGGAT 58.677 47.619 0.00 0.00 0.00 3.85
69 70 1.006878 TGGACATGGCATTTGATGGGA 59.993 47.619 0.00 0.00 0.00 4.37
70 71 1.411246 CTGGACATGGCATTTGATGGG 59.589 52.381 0.00 0.00 0.00 4.00
71 72 2.380941 TCTGGACATGGCATTTGATGG 58.619 47.619 0.00 0.00 0.00 3.51
72 73 3.798889 GCATCTGGACATGGCATTTGATG 60.799 47.826 0.00 9.17 34.82 3.07
73 74 2.364324 GCATCTGGACATGGCATTTGAT 59.636 45.455 0.00 0.00 0.00 2.57
74 75 1.752498 GCATCTGGACATGGCATTTGA 59.248 47.619 0.00 0.00 0.00 2.69
75 76 1.478916 TGCATCTGGACATGGCATTTG 59.521 47.619 0.00 0.00 0.00 2.32
76 77 1.855295 TGCATCTGGACATGGCATTT 58.145 45.000 0.00 0.00 0.00 2.32
77 78 1.855295 TTGCATCTGGACATGGCATT 58.145 45.000 0.00 0.00 34.03 3.56
78 79 1.855295 TTTGCATCTGGACATGGCAT 58.145 45.000 0.00 0.00 34.03 4.40
79 80 1.478916 CATTTGCATCTGGACATGGCA 59.521 47.619 0.00 0.00 0.00 4.92
80 81 1.805120 GCATTTGCATCTGGACATGGC 60.805 52.381 0.00 0.00 41.59 4.40
81 82 1.202486 GGCATTTGCATCTGGACATGG 60.202 52.381 4.74 0.00 44.36 3.66
82 83 1.202486 GGGCATTTGCATCTGGACATG 60.202 52.381 4.74 0.00 44.36 3.21
83 84 1.117150 GGGCATTTGCATCTGGACAT 58.883 50.000 4.74 0.00 44.36 3.06
84 85 0.040058 AGGGCATTTGCATCTGGACA 59.960 50.000 4.74 0.00 44.36 4.02
85 86 0.743097 GAGGGCATTTGCATCTGGAC 59.257 55.000 4.74 0.00 44.36 4.02
86 87 0.627451 AGAGGGCATTTGCATCTGGA 59.373 50.000 4.74 0.00 44.36 3.86
87 88 1.481871 AAGAGGGCATTTGCATCTGG 58.518 50.000 4.74 0.00 44.36 3.86
88 89 3.604875 AAAAGAGGGCATTTGCATCTG 57.395 42.857 4.74 0.00 44.36 2.90
108 109 2.107378 GGGGAAAGGCAAATGGGAAAAA 59.893 45.455 0.00 0.00 0.00 1.94
109 110 1.702401 GGGGAAAGGCAAATGGGAAAA 59.298 47.619 0.00 0.00 0.00 2.29
110 111 1.357137 GGGGAAAGGCAAATGGGAAA 58.643 50.000 0.00 0.00 0.00 3.13
111 112 0.546507 GGGGGAAAGGCAAATGGGAA 60.547 55.000 0.00 0.00 0.00 3.97
112 113 1.080170 GGGGGAAAGGCAAATGGGA 59.920 57.895 0.00 0.00 0.00 4.37
113 114 0.977627 GAGGGGGAAAGGCAAATGGG 60.978 60.000 0.00 0.00 0.00 4.00
114 115 0.252193 TGAGGGGGAAAGGCAAATGG 60.252 55.000 0.00 0.00 0.00 3.16
115 116 1.643310 TTGAGGGGGAAAGGCAAATG 58.357 50.000 0.00 0.00 0.00 2.32
116 117 2.414250 TTTGAGGGGGAAAGGCAAAT 57.586 45.000 0.00 0.00 0.00 2.32
117 118 2.182516 TTTTGAGGGGGAAAGGCAAA 57.817 45.000 0.00 0.00 0.00 3.68
118 119 2.256306 GATTTTGAGGGGGAAAGGCAA 58.744 47.619 0.00 0.00 0.00 4.52
119 120 1.552254 GGATTTTGAGGGGGAAAGGCA 60.552 52.381 0.00 0.00 0.00 4.75
120 121 1.195115 GGATTTTGAGGGGGAAAGGC 58.805 55.000 0.00 0.00 0.00 4.35
121 122 2.624293 GGAGGATTTTGAGGGGGAAAGG 60.624 54.545 0.00 0.00 0.00 3.11
122 123 2.313041 AGGAGGATTTTGAGGGGGAAAG 59.687 50.000 0.00 0.00 0.00 2.62
123 124 2.368170 AGGAGGATTTTGAGGGGGAAA 58.632 47.619 0.00 0.00 0.00 3.13
124 125 2.074922 AGGAGGATTTTGAGGGGGAA 57.925 50.000 0.00 0.00 0.00 3.97
125 126 2.982842 TAGGAGGATTTTGAGGGGGA 57.017 50.000 0.00 0.00 0.00 4.81
126 127 3.627492 GGTTTAGGAGGATTTTGAGGGGG 60.627 52.174 0.00 0.00 0.00 5.40
127 128 3.627492 GGGTTTAGGAGGATTTTGAGGGG 60.627 52.174 0.00 0.00 0.00 4.79
128 129 3.269643 AGGGTTTAGGAGGATTTTGAGGG 59.730 47.826 0.00 0.00 0.00 4.30
129 130 4.592997 AGGGTTTAGGAGGATTTTGAGG 57.407 45.455 0.00 0.00 0.00 3.86
130 131 6.721668 AGAAAAGGGTTTAGGAGGATTTTGAG 59.278 38.462 0.00 0.00 0.00 3.02
131 132 6.620429 AGAAAAGGGTTTAGGAGGATTTTGA 58.380 36.000 0.00 0.00 0.00 2.69
132 133 6.918067 AGAAAAGGGTTTAGGAGGATTTTG 57.082 37.500 0.00 0.00 0.00 2.44
133 134 7.016268 GGAAAGAAAAGGGTTTAGGAGGATTTT 59.984 37.037 0.00 0.00 0.00 1.82
134 135 6.497259 GGAAAGAAAAGGGTTTAGGAGGATTT 59.503 38.462 0.00 0.00 0.00 2.17
135 136 6.017192 GGAAAGAAAAGGGTTTAGGAGGATT 58.983 40.000 0.00 0.00 0.00 3.01
136 137 5.518546 GGGAAAGAAAAGGGTTTAGGAGGAT 60.519 44.000 0.00 0.00 0.00 3.24
137 138 4.202641 GGGAAAGAAAAGGGTTTAGGAGGA 60.203 45.833 0.00 0.00 0.00 3.71
138 139 4.087182 GGGAAAGAAAAGGGTTTAGGAGG 58.913 47.826 0.00 0.00 0.00 4.30
139 140 4.999310 AGGGAAAGAAAAGGGTTTAGGAG 58.001 43.478 0.00 0.00 0.00 3.69
140 141 4.668335 AGAGGGAAAGAAAAGGGTTTAGGA 59.332 41.667 0.00 0.00 0.00 2.94
141 142 4.999310 AGAGGGAAAGAAAAGGGTTTAGG 58.001 43.478 0.00 0.00 0.00 2.69
142 143 5.010933 GGAGAGGGAAAGAAAAGGGTTTAG 58.989 45.833 0.00 0.00 0.00 1.85
143 144 4.668335 AGGAGAGGGAAAGAAAAGGGTTTA 59.332 41.667 0.00 0.00 0.00 2.01
144 145 3.467483 AGGAGAGGGAAAGAAAAGGGTTT 59.533 43.478 0.00 0.00 0.00 3.27
145 146 3.064412 AGGAGAGGGAAAGAAAAGGGTT 58.936 45.455 0.00 0.00 0.00 4.11
146 147 2.645297 GAGGAGAGGGAAAGAAAAGGGT 59.355 50.000 0.00 0.00 0.00 4.34
147 148 2.355209 CGAGGAGAGGGAAAGAAAAGGG 60.355 54.545 0.00 0.00 0.00 3.95
148 149 2.937433 GCGAGGAGAGGGAAAGAAAAGG 60.937 54.545 0.00 0.00 0.00 3.11
149 150 2.351455 GCGAGGAGAGGGAAAGAAAAG 58.649 52.381 0.00 0.00 0.00 2.27
150 151 1.003233 GGCGAGGAGAGGGAAAGAAAA 59.997 52.381 0.00 0.00 0.00 2.29
151 152 0.613777 GGCGAGGAGAGGGAAAGAAA 59.386 55.000 0.00 0.00 0.00 2.52
152 153 0.252284 AGGCGAGGAGAGGGAAAGAA 60.252 55.000 0.00 0.00 0.00 2.52
153 154 0.252284 AAGGCGAGGAGAGGGAAAGA 60.252 55.000 0.00 0.00 0.00 2.52
154 155 0.615850 AAAGGCGAGGAGAGGGAAAG 59.384 55.000 0.00 0.00 0.00 2.62
155 156 0.613777 GAAAGGCGAGGAGAGGGAAA 59.386 55.000 0.00 0.00 0.00 3.13
156 157 1.265454 GGAAAGGCGAGGAGAGGGAA 61.265 60.000 0.00 0.00 0.00 3.97
157 158 1.686110 GGAAAGGCGAGGAGAGGGA 60.686 63.158 0.00 0.00 0.00 4.20
158 159 2.736826 GGGAAAGGCGAGGAGAGGG 61.737 68.421 0.00 0.00 0.00 4.30
159 160 2.736826 GGGGAAAGGCGAGGAGAGG 61.737 68.421 0.00 0.00 0.00 3.69
160 161 1.341156 ATGGGGAAAGGCGAGGAGAG 61.341 60.000 0.00 0.00 0.00 3.20
161 162 1.306997 ATGGGGAAAGGCGAGGAGA 60.307 57.895 0.00 0.00 0.00 3.71
162 163 1.147153 GATGGGGAAAGGCGAGGAG 59.853 63.158 0.00 0.00 0.00 3.69
163 164 1.615124 TGATGGGGAAAGGCGAGGA 60.615 57.895 0.00 0.00 0.00 3.71
164 165 1.452108 GTGATGGGGAAAGGCGAGG 60.452 63.158 0.00 0.00 0.00 4.63
165 166 1.452108 GGTGATGGGGAAAGGCGAG 60.452 63.158 0.00 0.00 0.00 5.03
166 167 2.227757 TGGTGATGGGGAAAGGCGA 61.228 57.895 0.00 0.00 0.00 5.54
167 168 2.046285 GTGGTGATGGGGAAAGGCG 61.046 63.158 0.00 0.00 0.00 5.52
168 169 0.681243 GAGTGGTGATGGGGAAAGGC 60.681 60.000 0.00 0.00 0.00 4.35
169 170 0.698238 TGAGTGGTGATGGGGAAAGG 59.302 55.000 0.00 0.00 0.00 3.11
170 171 1.614317 GGTGAGTGGTGATGGGGAAAG 60.614 57.143 0.00 0.00 0.00 2.62
171 172 0.404040 GGTGAGTGGTGATGGGGAAA 59.596 55.000 0.00 0.00 0.00 3.13
172 173 1.497309 GGGTGAGTGGTGATGGGGAA 61.497 60.000 0.00 0.00 0.00 3.97
173 174 1.923395 GGGTGAGTGGTGATGGGGA 60.923 63.158 0.00 0.00 0.00 4.81
174 175 2.230653 TGGGTGAGTGGTGATGGGG 61.231 63.158 0.00 0.00 0.00 4.96
175 176 1.002134 GTGGGTGAGTGGTGATGGG 60.002 63.158 0.00 0.00 0.00 4.00
176 177 0.036010 GAGTGGGTGAGTGGTGATGG 60.036 60.000 0.00 0.00 0.00 3.51
177 178 0.036010 GGAGTGGGTGAGTGGTGATG 60.036 60.000 0.00 0.00 0.00 3.07
178 179 1.201429 GGGAGTGGGTGAGTGGTGAT 61.201 60.000 0.00 0.00 0.00 3.06
179 180 1.841556 GGGAGTGGGTGAGTGGTGA 60.842 63.158 0.00 0.00 0.00 4.02
180 181 2.750350 GGGAGTGGGTGAGTGGTG 59.250 66.667 0.00 0.00 0.00 4.17
181 182 2.529389 GGGGAGTGGGTGAGTGGT 60.529 66.667 0.00 0.00 0.00 4.16
182 183 3.330720 GGGGGAGTGGGTGAGTGG 61.331 72.222 0.00 0.00 0.00 4.00
196 197 1.359818 GGTAGATAGAGAGGGAGGGGG 59.640 61.905 0.00 0.00 0.00 5.40
197 198 2.310647 GAGGTAGATAGAGAGGGAGGGG 59.689 59.091 0.00 0.00 0.00 4.79
198 199 2.310647 GGAGGTAGATAGAGAGGGAGGG 59.689 59.091 0.00 0.00 0.00 4.30
199 200 3.265489 AGGAGGTAGATAGAGAGGGAGG 58.735 54.545 0.00 0.00 0.00 4.30
200 201 4.263771 GGAAGGAGGTAGATAGAGAGGGAG 60.264 54.167 0.00 0.00 0.00 4.30
201 202 3.658705 GGAAGGAGGTAGATAGAGAGGGA 59.341 52.174 0.00 0.00 0.00 4.20
202 203 3.560453 CGGAAGGAGGTAGATAGAGAGGG 60.560 56.522 0.00 0.00 0.00 4.30
203 204 3.681593 CGGAAGGAGGTAGATAGAGAGG 58.318 54.545 0.00 0.00 0.00 3.69
724 725 0.468029 GGGAGAGAGAGAGAGGCCTG 60.468 65.000 12.00 0.00 0.00 4.85
742 743 2.265890 TAGCTGTAAGGGGGAGGGGG 62.266 65.000 0.00 0.00 0.00 5.40
744 745 0.031010 AGTAGCTGTAAGGGGGAGGG 60.031 60.000 0.00 0.00 0.00 4.30
839 843 2.858644 AGAGAGAGAGAGGAAGAGGGA 58.141 52.381 0.00 0.00 0.00 4.20
840 844 3.973973 TCTAGAGAGAGAGAGGAAGAGGG 59.026 52.174 0.00 0.00 0.00 4.30
841 845 5.545723 AGATCTAGAGAGAGAGAGGAAGAGG 59.454 48.000 0.00 0.00 34.35 3.69
842 846 6.462500 CAGATCTAGAGAGAGAGAGGAAGAG 58.538 48.000 0.00 0.00 34.35 2.85
843 847 5.221722 GCAGATCTAGAGAGAGAGAGGAAGA 60.222 48.000 0.00 0.00 34.35 2.87
844 848 4.999950 GCAGATCTAGAGAGAGAGAGGAAG 59.000 50.000 0.00 0.00 34.35 3.46
845 849 4.503123 CGCAGATCTAGAGAGAGAGAGGAA 60.503 50.000 0.00 0.00 34.35 3.36
846 850 3.006859 CGCAGATCTAGAGAGAGAGAGGA 59.993 52.174 0.00 0.00 34.35 3.71
847 851 3.329386 CGCAGATCTAGAGAGAGAGAGG 58.671 54.545 0.00 0.00 34.35 3.69
848 852 2.738846 GCGCAGATCTAGAGAGAGAGAG 59.261 54.545 0.30 0.00 34.35 3.20
849 853 2.766313 GCGCAGATCTAGAGAGAGAGA 58.234 52.381 0.30 0.00 34.35 3.10
926 934 4.803426 GGGAGCAGCACGAGACGG 62.803 72.222 0.00 0.00 0.00 4.79
972 980 1.364171 CGGCCTCGGATTAGTGGAG 59.636 63.158 0.00 0.00 0.00 3.86
1325 1376 1.133513 ACCCAGCACATTTCTCACCAA 60.134 47.619 0.00 0.00 0.00 3.67
1406 1457 3.417101 ACATCCAGAAATACGGCACAAA 58.583 40.909 0.00 0.00 0.00 2.83
1425 1476 4.024977 CACAAATTCAGTGACGACATGACA 60.025 41.667 0.00 0.00 39.30 3.58
1555 1612 2.768253 TGGTAGTCTGCAGAACATGG 57.232 50.000 20.19 0.00 0.00 3.66
1660 1717 5.562506 GGTAAGCAACCTAACCAATCTTC 57.437 43.478 1.14 0.00 45.75 2.87
1709 1766 2.811317 GACGAGGGACTGCAAGCG 60.811 66.667 0.00 0.00 41.55 4.68
1794 1851 8.934507 AAGACCATTTCTCTAGAAAATACTCG 57.065 34.615 9.09 0.00 45.81 4.18
1863 1920 6.568869 TGTGTAAAAGGAACAACCAAATCAG 58.431 36.000 0.00 0.00 42.04 2.90
1872 1929 3.181495 CGCCACTTGTGTAAAAGGAACAA 60.181 43.478 0.00 0.00 0.00 2.83
1877 1934 0.951558 AGCGCCACTTGTGTAAAAGG 59.048 50.000 2.29 0.00 0.00 3.11
1937 1994 9.647797 TGTAACATCGGTAGGCATAAAATATAG 57.352 33.333 0.00 0.00 0.00 1.31
2164 2222 6.482524 AGTTCTACCAGGGAAAGGAATTTAC 58.517 40.000 0.00 0.00 0.00 2.01
2217 2275 7.485913 CGTTGCAGCAATAAAATTTCTACAGAT 59.514 33.333 11.96 0.00 0.00 2.90
2454 2514 3.772572 TCAATCGGGATAAGAGGACAACA 59.227 43.478 0.00 0.00 0.00 3.33
2729 2791 6.831769 ACTGTTAAGTTTTGATAGCGACATG 58.168 36.000 0.00 0.00 30.14 3.21
2962 3024 5.984725 TGAATGAAGATTAAGGGCGAGTAA 58.015 37.500 0.00 0.00 0.00 2.24
3067 3129 3.593442 AGTGATGACAGGTTTCCCAAA 57.407 42.857 0.00 0.00 0.00 3.28
3216 3278 1.168714 GAAGACCCTGCAACACATCC 58.831 55.000 0.00 0.00 0.00 3.51
3361 3423 8.862550 AAAGAAAGTTTCTGTTTAGCAATCAG 57.137 30.769 18.70 0.00 40.59 2.90
3533 3595 3.886123 AGTATGTGGAATTGTACAGCCC 58.114 45.455 0.00 0.00 0.00 5.19
3864 3936 6.037786 TGGATCGACAGTTAAGAGTTTGAT 57.962 37.500 0.00 0.00 0.00 2.57
3897 3969 7.472334 AAAACCAAAGCTATCAATGATCTGT 57.528 32.000 0.00 0.00 0.00 3.41
4023 4095 9.349713 TCTTACTTCAAATTTGGTATGTTGAGT 57.650 29.630 17.90 10.81 31.98 3.41
4232 4307 1.375523 GTAGGGCCTGTCGGTGTTG 60.376 63.158 18.53 0.00 0.00 3.33
4327 4402 0.323816 TCTCGAGCTGTGGATCCACT 60.324 55.000 37.92 23.25 46.30 4.00
4648 4726 6.038603 GCTGAGCCTGTTAATGAAACATCATA 59.961 38.462 0.00 0.00 46.81 2.15
4694 4772 5.226396 TGGCCAAATTTATTTCACGAACAG 58.774 37.500 0.61 0.00 0.00 3.16
4727 4811 8.470805 ACTAGTGGTCAGATTTACAAGTATCTG 58.529 37.037 0.00 0.00 45.81 2.90
4728 4812 8.596781 ACTAGTGGTCAGATTTACAAGTATCT 57.403 34.615 0.00 0.00 0.00 1.98
4729 4813 9.303537 GAACTAGTGGTCAGATTTACAAGTATC 57.696 37.037 0.00 0.00 0.00 2.24
4730 4814 8.812972 TGAACTAGTGGTCAGATTTACAAGTAT 58.187 33.333 0.00 0.00 0.00 2.12
4731 4815 8.185506 TGAACTAGTGGTCAGATTTACAAGTA 57.814 34.615 0.00 0.00 0.00 2.24
4732 4816 7.062749 TGAACTAGTGGTCAGATTTACAAGT 57.937 36.000 0.00 0.00 0.00 3.16
4851 4935 3.063588 GCTCCAAGTTAATTACACGCTCC 59.936 47.826 0.00 0.00 0.00 4.70
5225 5366 4.008330 ACAAGATGAGGACAGCATTTCAG 58.992 43.478 0.00 0.00 34.60 3.02
5258 5399 9.256228 TCTATCTTCATAACTTCCAGTAACTGT 57.744 33.333 0.00 0.00 0.00 3.55
5612 5753 4.450053 GAGATACCTGCAAGAAGAGCATT 58.550 43.478 0.00 0.00 41.82 3.56
5701 5842 2.342651 CAGCAACACGTACTGAGAATCG 59.657 50.000 0.00 0.00 38.61 3.34
5790 5931 4.083271 GCTAAAACACCCTAAGCACAAGAG 60.083 45.833 0.00 0.00 33.38 2.85
5924 6066 7.370905 TCCATGAACTCATTGTCAGATAGAT 57.629 36.000 0.00 0.00 33.61 1.98
5954 6096 9.334693 CATGTTTTTCTACATAAGAGAAGTTGC 57.665 33.333 0.00 0.00 36.64 4.17
6232 6390 5.718649 ATGTAAGTATGTTCATGCACGAC 57.281 39.130 0.00 0.00 0.00 4.34
6465 7903 5.838521 AGAAGCAAGAATCCCCTAAAACAAA 59.161 36.000 0.00 0.00 0.00 2.83
6477 7915 4.092091 CACCGAAGTACAGAAGCAAGAATC 59.908 45.833 0.00 0.00 0.00 2.52
6503 7941 4.874970 AGGTTTCAGATTCATTTGCACAC 58.125 39.130 0.00 0.00 0.00 3.82
6550 7988 5.682862 CAGACAACTGAAATCAAAAGGAACG 59.317 40.000 0.00 0.00 46.03 3.95
6702 8140 1.395954 CATTGCATCACTGACCTGTCG 59.604 52.381 0.00 0.00 0.00 4.35
6855 8293 2.173356 CTGGGCCCATCTAACAAGATGA 59.827 50.000 28.82 0.00 46.25 2.92
6889 8327 6.590292 ACGATCTTTGTTAGTGATTCGATGTT 59.410 34.615 0.00 0.00 0.00 2.71
7129 8571 6.943899 AGAAAATAATGGCTTTTACCCCAA 57.056 33.333 0.00 0.00 34.25 4.12
7166 8608 6.235231 ACCGGAATATCATAGTGAACAAGT 57.765 37.500 9.46 0.00 0.00 3.16
7225 8668 6.278363 GCCACATGCTCAATAAAATCATCTT 58.722 36.000 0.00 0.00 36.87 2.40
7285 8728 2.046023 CAGACATTGGCGGCCTGA 60.046 61.111 21.46 9.39 0.00 3.86
7556 9003 1.829222 ACAACGAGAATCCCCGTATGT 59.171 47.619 0.00 4.17 38.13 2.29
7786 9254 6.739843 GCATCTATACCAGACTACAACAGCAT 60.740 42.308 0.00 0.00 35.62 3.79
7805 9277 2.300197 TGCCCCTGCACAGCATCTA 61.300 57.895 0.00 0.00 44.23 1.98
7823 9295 4.437682 TGTCAAGTGAGGGACTTCATTT 57.562 40.909 0.00 0.00 43.52 2.32
7849 9321 8.635765 AGAAAGACAAATATTTAGGAACAGCA 57.364 30.769 0.00 0.00 0.00 4.41
7883 9355 9.998106 ATTTTGCTCCGTATATAGTCACTTATT 57.002 29.630 0.00 0.00 0.00 1.40
7884 9356 9.424319 CATTTTGCTCCGTATATAGTCACTTAT 57.576 33.333 0.00 0.00 0.00 1.73
7885 9357 8.635328 TCATTTTGCTCCGTATATAGTCACTTA 58.365 33.333 0.00 0.00 0.00 2.24
7886 9358 7.497595 TCATTTTGCTCCGTATATAGTCACTT 58.502 34.615 0.00 0.00 0.00 3.16
7887 9359 7.050970 TCATTTTGCTCCGTATATAGTCACT 57.949 36.000 0.00 0.00 0.00 3.41
7888 9360 6.924060 ACTCATTTTGCTCCGTATATAGTCAC 59.076 38.462 0.00 0.00 0.00 3.67
7889 9361 6.923508 CACTCATTTTGCTCCGTATATAGTCA 59.076 38.462 0.00 0.00 0.00 3.41
7890 9362 7.145985 TCACTCATTTTGCTCCGTATATAGTC 58.854 38.462 0.00 0.00 0.00 2.59
7891 9363 7.050970 TCACTCATTTTGCTCCGTATATAGT 57.949 36.000 0.00 0.00 0.00 2.12
7892 9364 7.946655 TTCACTCATTTTGCTCCGTATATAG 57.053 36.000 0.00 0.00 0.00 1.31
7893 9365 8.367911 AGATTCACTCATTTTGCTCCGTATATA 58.632 33.333 0.00 0.00 0.00 0.86
7894 9366 7.220030 AGATTCACTCATTTTGCTCCGTATAT 58.780 34.615 0.00 0.00 0.00 0.86
7895 9367 6.582636 AGATTCACTCATTTTGCTCCGTATA 58.417 36.000 0.00 0.00 0.00 1.47
7896 9368 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
7897 9369 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
7898 9370 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
7899 9371 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
7900 9372 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
7901 9373 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
7902 9374 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
7903 9375 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
7932 9404 9.696572 ACTACCACATACGGATGTATATAGAAT 57.303 33.333 22.62 7.05 44.82 2.40
7933 9405 9.170734 GACTACCACATACGGATGTATATAGAA 57.829 37.037 22.62 4.38 44.82 2.10
7934 9406 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
7935 9407 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
7936 9408 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
7937 9409 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
7938 9410 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
7939 9411 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
7940 9412 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
7956 9428 9.793259 TGTCTGTTTAGAGATTTTAAATGGACT 57.207 29.630 0.00 0.00 32.48 3.85
7971 9443 9.158233 CCGTTCCTAAATATTTGTCTGTTTAGA 57.842 33.333 11.05 0.00 36.66 2.10
7972 9444 9.158233 TCCGTTCCTAAATATTTGTCTGTTTAG 57.842 33.333 11.05 0.00 35.15 1.85
7973 9445 9.158233 CTCCGTTCCTAAATATTTGTCTGTTTA 57.842 33.333 11.05 0.00 0.00 2.01
7974 9446 7.120726 CCTCCGTTCCTAAATATTTGTCTGTTT 59.879 37.037 11.05 0.00 0.00 2.83
7975 9447 6.598064 CCTCCGTTCCTAAATATTTGTCTGTT 59.402 38.462 11.05 0.00 0.00 3.16
7976 9448 6.113411 CCTCCGTTCCTAAATATTTGTCTGT 58.887 40.000 11.05 0.00 0.00 3.41
7977 9449 5.527582 CCCTCCGTTCCTAAATATTTGTCTG 59.472 44.000 11.05 0.00 0.00 3.51
7978 9450 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
7979 9451 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
7980 9452 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
7981 9453 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
7982 9454 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
7983 9455 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
7984 9456 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
7985 9457 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
7986 9458 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
7987 9459 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
7988 9460 3.967467 ATCTACTCCCTCCGTTCCTAA 57.033 47.619 0.00 0.00 0.00 2.69
7989 9461 3.462579 AGAATCTACTCCCTCCGTTCCTA 59.537 47.826 0.00 0.00 0.00 2.94
7990 9462 2.245287 AGAATCTACTCCCTCCGTTCCT 59.755 50.000 0.00 0.00 0.00 3.36
7991 9463 2.668625 AGAATCTACTCCCTCCGTTCC 58.331 52.381 0.00 0.00 0.00 3.62
7992 9464 4.463070 AGTAGAATCTACTCCCTCCGTTC 58.537 47.826 16.62 0.00 0.00 3.95
7993 9465 4.166531 AGAGTAGAATCTACTCCCTCCGTT 59.833 45.833 34.35 18.97 43.61 4.44
7994 9466 3.717913 AGAGTAGAATCTACTCCCTCCGT 59.282 47.826 34.35 19.55 43.61 4.69
7995 9467 4.069304 CAGAGTAGAATCTACTCCCTCCG 58.931 52.174 34.35 20.10 43.61 4.63
7996 9468 4.105057 TCCAGAGTAGAATCTACTCCCTCC 59.895 50.000 34.35 18.39 43.61 4.30
7997 9469 5.313280 TCCAGAGTAGAATCTACTCCCTC 57.687 47.826 34.35 18.85 43.61 4.30
7998 9470 4.105697 CCTCCAGAGTAGAATCTACTCCCT 59.894 50.000 34.35 21.31 43.61 4.20
7999 9471 4.403734 CCTCCAGAGTAGAATCTACTCCC 58.596 52.174 34.35 19.58 43.61 4.30
8000 9472 3.824443 GCCTCCAGAGTAGAATCTACTCC 59.176 52.174 34.35 22.01 43.61 3.85
8001 9473 4.465886 TGCCTCCAGAGTAGAATCTACTC 58.534 47.826 32.37 32.37 43.08 2.59
8002 9474 4.528076 TGCCTCCAGAGTAGAATCTACT 57.472 45.455 21.69 21.69 0.00 2.57
8003 9475 5.599999 TTTGCCTCCAGAGTAGAATCTAC 57.400 43.478 12.26 12.26 0.00 2.59
8004 9476 5.721960 ACTTTTGCCTCCAGAGTAGAATCTA 59.278 40.000 0.00 0.00 0.00 1.98
8038 9510 1.069022 GTGCATGTGAGCGATGTTTGT 60.069 47.619 0.00 0.00 37.31 2.83
8039 9511 1.609932 GTGCATGTGAGCGATGTTTG 58.390 50.000 0.00 0.00 37.31 2.93
8040 9512 0.523072 GGTGCATGTGAGCGATGTTT 59.477 50.000 0.00 0.00 37.31 2.83
8041 9513 0.321919 AGGTGCATGTGAGCGATGTT 60.322 50.000 0.00 0.00 37.31 2.71
8042 9514 0.321919 AAGGTGCATGTGAGCGATGT 60.322 50.000 0.00 0.00 37.31 3.06
8043 9515 0.806868 AAAGGTGCATGTGAGCGATG 59.193 50.000 0.00 0.00 37.31 3.84
8044 9516 1.200716 CAAAAGGTGCATGTGAGCGAT 59.799 47.619 0.00 0.00 37.31 4.58
8045 9517 0.592637 CAAAAGGTGCATGTGAGCGA 59.407 50.000 0.00 0.00 37.31 4.93
8046 9518 3.096541 CAAAAGGTGCATGTGAGCG 57.903 52.632 0.00 0.00 37.31 5.03
8105 9577 6.875726 TGACCATCAATGTTTGTTGACAAAAA 59.124 30.769 10.58 6.42 46.08 1.94
8106 9578 6.312426 GTGACCATCAATGTTTGTTGACAAAA 59.688 34.615 10.58 3.21 46.08 2.44
8107 9579 5.809562 GTGACCATCAATGTTTGTTGACAAA 59.190 36.000 5.25 5.25 40.60 2.83
8108 9580 5.105595 TGTGACCATCAATGTTTGTTGACAA 60.106 36.000 0.00 0.00 40.60 3.18
8109 9581 4.400567 TGTGACCATCAATGTTTGTTGACA 59.599 37.500 0.97 0.00 40.60 3.58
8110 9582 4.930963 TGTGACCATCAATGTTTGTTGAC 58.069 39.130 0.97 0.00 40.60 3.18
8111 9583 5.771469 GATGTGACCATCAATGTTTGTTGA 58.229 37.500 0.00 0.00 45.68 3.18
8123 9595 7.712264 TTTTGTTGATTTTGATGTGACCATC 57.288 32.000 0.00 0.00 46.41 3.51
8124 9596 8.561212 CAATTTTGTTGATTTTGATGTGACCAT 58.439 29.630 0.00 0.00 0.00 3.55
8125 9597 7.767659 TCAATTTTGTTGATTTTGATGTGACCA 59.232 29.630 0.00 0.00 0.00 4.02
8126 9598 8.140677 TCAATTTTGTTGATTTTGATGTGACC 57.859 30.769 0.00 0.00 0.00 4.02
8127 9599 8.277713 CCTCAATTTTGTTGATTTTGATGTGAC 58.722 33.333 0.00 0.00 0.00 3.67
8128 9600 7.041916 GCCTCAATTTTGTTGATTTTGATGTGA 60.042 33.333 0.00 0.00 0.00 3.58
8129 9601 7.041644 AGCCTCAATTTTGTTGATTTTGATGTG 60.042 33.333 0.00 0.00 0.00 3.21
8130 9602 6.993902 AGCCTCAATTTTGTTGATTTTGATGT 59.006 30.769 0.00 0.00 0.00 3.06
8131 9603 7.360607 GGAGCCTCAATTTTGTTGATTTTGATG 60.361 37.037 0.00 0.00 0.00 3.07
8132 9604 6.652062 GGAGCCTCAATTTTGTTGATTTTGAT 59.348 34.615 0.00 0.00 0.00 2.57
8133 9605 5.990996 GGAGCCTCAATTTTGTTGATTTTGA 59.009 36.000 0.00 0.00 0.00 2.69
8134 9606 5.759273 TGGAGCCTCAATTTTGTTGATTTTG 59.241 36.000 0.00 0.00 0.00 2.44
8135 9607 5.927819 TGGAGCCTCAATTTTGTTGATTTT 58.072 33.333 0.00 0.00 0.00 1.82
8136 9608 5.549742 TGGAGCCTCAATTTTGTTGATTT 57.450 34.783 0.00 0.00 0.00 2.17
8137 9609 5.549742 TTGGAGCCTCAATTTTGTTGATT 57.450 34.783 0.00 0.00 0.00 2.57
8138 9610 5.549742 TTTGGAGCCTCAATTTTGTTGAT 57.450 34.783 0.00 0.00 0.00 2.57
8139 9611 5.350504 TTTTGGAGCCTCAATTTTGTTGA 57.649 34.783 0.00 0.00 0.00 3.18
8140 9612 5.561339 GCATTTTGGAGCCTCAATTTTGTTG 60.561 40.000 0.00 0.00 0.00 3.33
8141 9613 4.516321 GCATTTTGGAGCCTCAATTTTGTT 59.484 37.500 0.00 0.00 0.00 2.83
8142 9614 4.067192 GCATTTTGGAGCCTCAATTTTGT 58.933 39.130 0.00 0.00 0.00 2.83
8143 9615 4.320870 AGCATTTTGGAGCCTCAATTTTG 58.679 39.130 0.00 0.00 0.00 2.44
8144 9616 4.628963 AGCATTTTGGAGCCTCAATTTT 57.371 36.364 0.00 0.00 0.00 1.82
8145 9617 4.628963 AAGCATTTTGGAGCCTCAATTT 57.371 36.364 0.00 0.00 0.00 1.82
8146 9618 4.628963 AAAGCATTTTGGAGCCTCAATT 57.371 36.364 0.00 0.00 31.62 2.32
8147 9619 5.743636 TTAAAGCATTTTGGAGCCTCAAT 57.256 34.783 0.00 0.00 40.09 2.57
8148 9620 5.543507 TTTAAAGCATTTTGGAGCCTCAA 57.456 34.783 0.00 0.00 40.09 3.02
8149 9621 5.543507 TTTTAAAGCATTTTGGAGCCTCA 57.456 34.783 0.00 0.00 40.09 3.86
8169 9641 5.976458 TCATGCTCCAAAGAAACTGTTTTT 58.024 33.333 7.28 0.00 0.00 1.94
8170 9642 5.596836 TCATGCTCCAAAGAAACTGTTTT 57.403 34.783 7.28 0.00 0.00 2.43
8171 9643 5.796424 ATCATGCTCCAAAGAAACTGTTT 57.204 34.783 5.29 5.29 0.00 2.83
8172 9644 5.796424 AATCATGCTCCAAAGAAACTGTT 57.204 34.783 0.00 0.00 0.00 3.16
8173 9645 5.796424 AAATCATGCTCCAAAGAAACTGT 57.204 34.783 0.00 0.00 0.00 3.55
8174 9646 5.107220 GCAAAATCATGCTCCAAAGAAACTG 60.107 40.000 0.00 0.00 43.06 3.16
8175 9647 4.992951 GCAAAATCATGCTCCAAAGAAACT 59.007 37.500 0.00 0.00 43.06 2.66
8176 9648 5.273523 GCAAAATCATGCTCCAAAGAAAC 57.726 39.130 0.00 0.00 43.06 2.78
8202 9674 9.912634 GTGATGAAATGACATTTTTAGAGGAAA 57.087 29.630 14.46 0.00 27.82 3.13
8203 9675 9.076781 TGTGATGAAATGACATTTTTAGAGGAA 57.923 29.630 14.46 0.00 34.84 3.36
8204 9676 8.634335 TGTGATGAAATGACATTTTTAGAGGA 57.366 30.769 14.46 0.00 34.84 3.71
8205 9677 9.695526 TTTGTGATGAAATGACATTTTTAGAGG 57.304 29.630 14.46 0.00 40.97 3.69
8213 9685 9.327628 TGTCAATTTTTGTGATGAAATGACATT 57.672 25.926 0.00 0.00 40.97 2.71
8214 9686 8.890124 TGTCAATTTTTGTGATGAAATGACAT 57.110 26.923 0.00 0.00 40.97 3.06
8215 9687 8.766151 CATGTCAATTTTTGTGATGAAATGACA 58.234 29.630 7.16 7.16 39.15 3.58
8216 9688 7.742963 GCATGTCAATTTTTGTGATGAAATGAC 59.257 33.333 8.56 0.00 39.02 3.06
8217 9689 7.441458 TGCATGTCAATTTTTGTGATGAAATGA 59.559 29.630 8.56 0.00 39.02 2.57
8218 9690 7.577107 TGCATGTCAATTTTTGTGATGAAATG 58.423 30.769 0.00 0.00 39.47 2.32
8219 9691 7.731882 TGCATGTCAATTTTTGTGATGAAAT 57.268 28.000 0.00 0.00 0.00 2.17
8220 9692 7.226918 ACATGCATGTCAATTTTTGTGATGAAA 59.773 29.630 26.61 0.00 35.87 2.69
8221 9693 6.706716 ACATGCATGTCAATTTTTGTGATGAA 59.293 30.769 26.61 0.00 35.87 2.57
8222 9694 6.146347 CACATGCATGTCAATTTTTGTGATGA 59.854 34.615 29.23 0.00 39.39 2.92
8223 9695 6.146347 TCACATGCATGTCAATTTTTGTGATG 59.854 34.615 29.23 12.88 39.39 3.07
8224 9696 6.224584 TCACATGCATGTCAATTTTTGTGAT 58.775 32.000 29.23 0.00 39.39 3.06
8225 9697 5.598769 TCACATGCATGTCAATTTTTGTGA 58.401 33.333 29.23 17.64 39.39 3.58
8226 9698 5.908916 TCACATGCATGTCAATTTTTGTG 57.091 34.783 29.23 15.59 39.39 3.33
8227 9699 6.315642 TGTTTCACATGCATGTCAATTTTTGT 59.684 30.769 29.23 2.55 39.39 2.83
8228 9700 6.629649 GTGTTTCACATGCATGTCAATTTTTG 59.370 34.615 29.23 15.43 39.39 2.44
8229 9701 6.315642 TGTGTTTCACATGCATGTCAATTTTT 59.684 30.769 29.23 2.57 39.62 1.94
8230 9702 5.816258 TGTGTTTCACATGCATGTCAATTTT 59.184 32.000 29.23 3.39 39.62 1.82
8231 9703 5.234757 GTGTGTTTCACATGCATGTCAATTT 59.765 36.000 29.23 4.20 46.32 1.82
8232 9704 4.746115 GTGTGTTTCACATGCATGTCAATT 59.254 37.500 29.23 5.02 46.32 2.32
8233 9705 4.300803 GTGTGTTTCACATGCATGTCAAT 58.699 39.130 29.23 5.44 46.32 2.57
8234 9706 3.704512 GTGTGTTTCACATGCATGTCAA 58.295 40.909 29.23 21.27 46.32 3.18
8235 9707 3.352554 GTGTGTTTCACATGCATGTCA 57.647 42.857 29.23 20.48 46.32 3.58
8311 9783 8.682710 GCACCCTTTGATGTAGTAATATCAAAA 58.317 33.333 17.64 8.09 46.27 2.44
8312 9784 7.831690 TGCACCCTTTGATGTAGTAATATCAAA 59.168 33.333 16.73 16.73 45.45 2.69
8313 9785 7.342581 TGCACCCTTTGATGTAGTAATATCAA 58.657 34.615 6.89 6.89 40.30 2.57
8314 9786 6.894682 TGCACCCTTTGATGTAGTAATATCA 58.105 36.000 0.00 0.00 32.01 2.15
8315 9787 7.445402 ACATGCACCCTTTGATGTAGTAATATC 59.555 37.037 0.00 0.00 29.43 1.63
8316 9788 7.229306 CACATGCACCCTTTGATGTAGTAATAT 59.771 37.037 0.00 0.00 29.84 1.28
8317 9789 6.542005 CACATGCACCCTTTGATGTAGTAATA 59.458 38.462 0.00 0.00 29.84 0.98
8318 9790 5.357878 CACATGCACCCTTTGATGTAGTAAT 59.642 40.000 0.00 0.00 29.84 1.89
8319 9791 4.699735 CACATGCACCCTTTGATGTAGTAA 59.300 41.667 0.00 0.00 29.84 2.24
8320 9792 4.019771 TCACATGCACCCTTTGATGTAGTA 60.020 41.667 0.00 0.00 29.84 1.82
8321 9793 3.084039 CACATGCACCCTTTGATGTAGT 58.916 45.455 0.00 0.00 29.84 2.73
8322 9794 3.346315 TCACATGCACCCTTTGATGTAG 58.654 45.455 0.00 0.00 29.84 2.74
8323 9795 3.431673 TCACATGCACCCTTTGATGTA 57.568 42.857 0.00 0.00 29.84 2.29
8324 9796 2.291209 TCACATGCACCCTTTGATGT 57.709 45.000 0.00 0.00 0.00 3.06
8325 9797 2.559668 AGTTCACATGCACCCTTTGATG 59.440 45.455 0.00 0.00 0.00 3.07
8326 9798 2.821969 GAGTTCACATGCACCCTTTGAT 59.178 45.455 0.00 0.00 0.00 2.57
8327 9799 2.229792 GAGTTCACATGCACCCTTTGA 58.770 47.619 0.00 0.00 0.00 2.69
8328 9800 1.955778 TGAGTTCACATGCACCCTTTG 59.044 47.619 0.00 0.00 0.00 2.77
8329 9801 2.158623 TCTGAGTTCACATGCACCCTTT 60.159 45.455 0.00 0.00 0.00 3.11
8330 9802 1.421268 TCTGAGTTCACATGCACCCTT 59.579 47.619 0.00 0.00 0.00 3.95
8331 9803 1.002888 CTCTGAGTTCACATGCACCCT 59.997 52.381 0.00 0.00 0.00 4.34
8332 9804 1.446907 CTCTGAGTTCACATGCACCC 58.553 55.000 0.00 0.00 0.00 4.61
8333 9805 0.801251 GCTCTGAGTTCACATGCACC 59.199 55.000 6.53 0.00 0.00 5.01
8334 9806 1.731160 GAGCTCTGAGTTCACATGCAC 59.269 52.381 15.51 0.00 0.00 4.57
8335 9807 1.345415 TGAGCTCTGAGTTCACATGCA 59.655 47.619 18.60 0.00 30.30 3.96
8336 9808 2.090400 TGAGCTCTGAGTTCACATGC 57.910 50.000 18.60 0.00 30.30 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.