Multiple sequence alignment - TraesCS6B01G181200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G181200 chr6B 100.000 3591 0 0 1 3591 202542121 202545711 0.000000e+00 6632.0
1 TraesCS6B01G181200 chr6A 93.330 3538 109 58 1 3440 141293988 141297496 0.000000e+00 5108.0
2 TraesCS6B01G181200 chr6A 92.982 57 2 1 2668 2722 141296606 141296662 8.260000e-12 82.4
3 TraesCS6B01G181200 chr6D 95.063 1357 35 12 1419 2754 113462754 113464099 0.000000e+00 2106.0
4 TraesCS6B01G181200 chr6D 91.886 1442 66 22 1 1427 113459307 113460712 0.000000e+00 1967.0
5 TraesCS6B01G181200 chr6D 86.828 372 17 11 2756 3096 113464251 113464621 1.560000e-103 387.0
6 TraesCS6B01G181200 chr6D 90.033 301 16 7 3145 3439 113464623 113464915 9.410000e-101 377.0
7 TraesCS6B01G181200 chr5B 98.667 150 2 0 3442 3591 291382736 291382885 2.130000e-67 267.0
8 TraesCS6B01G181200 chr5B 96.000 150 6 0 3442 3591 647983700 647983551 9.960000e-61 244.0
9 TraesCS6B01G181200 chr7B 96.667 150 5 0 3442 3591 102806270 102806121 2.140000e-62 250.0
10 TraesCS6B01G181200 chr7B 86.667 150 20 0 1115 1264 662676249 662676100 2.220000e-37 167.0
11 TraesCS6B01G181200 chr7A 93.377 151 9 1 3442 3591 54755669 54755519 4.670000e-54 222.0
12 TraesCS6B01G181200 chr7A 92.000 150 12 0 3442 3591 626390904 626391053 1.010000e-50 211.0
13 TraesCS6B01G181200 chr7A 94.958 119 5 1 3474 3591 48482928 48482810 6.120000e-43 185.0
14 TraesCS6B01G181200 chr7A 87.013 154 20 0 1113 1266 680343200 680343047 1.330000e-39 174.0
15 TraesCS6B01G181200 chr5A 92.715 151 10 1 3442 3591 605322846 605322696 2.170000e-52 217.0
16 TraesCS6B01G181200 chr3A 92.715 151 10 1 3442 3591 623833321 623833471 2.170000e-52 217.0
17 TraesCS6B01G181200 chr7D 89.116 147 16 0 3442 3588 417069651 417069797 2.200000e-42 183.0
18 TraesCS6B01G181200 chr7D 86.275 153 21 0 1114 1266 588555891 588555739 2.220000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G181200 chr6B 202542121 202545711 3590 False 6632.00 6632 100.0000 1 3591 1 chr6B.!!$F1 3590
1 TraesCS6B01G181200 chr6A 141293988 141297496 3508 False 2595.20 5108 93.1560 1 3440 2 chr6A.!!$F1 3439
2 TraesCS6B01G181200 chr6D 113459307 113464915 5608 False 1209.25 2106 90.9525 1 3439 4 chr6D.!!$F1 3438

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
733 743 2.580962 TGTTTGCAGAAGCCATGTGTA 58.419 42.857 0.0 0.0 41.13 2.90 F
1578 3658 0.477597 ACTTCCCTCAATCCCCACCA 60.478 55.000 0.0 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2015 4109 0.251165 AAGGTAACCTTGCATGCCGT 60.251 50.0 16.68 5.75 42.96 5.68 R
3554 5857 0.178990 AGGGAGCTTTCCGCAAAAGT 60.179 50.0 9.57 0.00 45.23 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 6.039493 TGGCGGTGTAAAGTTTGAGAAATAAA 59.961 34.615 0.00 0.00 0.00 1.40
40 43 8.132995 CGGTGTAAAGTTTGAGAAATAAACCTT 58.867 33.333 0.00 0.00 38.47 3.50
41 44 9.811995 GGTGTAAAGTTTGAGAAATAAACCTTT 57.188 29.630 0.00 0.00 38.47 3.11
82 85 4.901197 TGTGGGATTAGACAGCTAAACA 57.099 40.909 0.00 0.00 39.85 2.83
154 157 5.479306 TCAACAGTCAGGCACTATTTAGTC 58.521 41.667 0.00 0.00 36.02 2.59
208 217 7.059202 TGTGATGCTATGATCAATGTCTAGT 57.941 36.000 0.00 0.00 34.11 2.57
214 223 7.729116 TGCTATGATCAATGTCTAGTCATTCA 58.271 34.615 11.61 8.35 36.10 2.57
221 230 9.163899 GATCAATGTCTAGTCATTCATGCATAT 57.836 33.333 11.61 0.00 36.10 1.78
223 232 7.935210 TCAATGTCTAGTCATTCATGCATATGT 59.065 33.333 11.61 0.00 36.10 2.29
224 233 8.565416 CAATGTCTAGTCATTCATGCATATGTT 58.435 33.333 11.61 0.00 36.10 2.71
225 234 7.486802 TGTCTAGTCATTCATGCATATGTTG 57.513 36.000 0.00 3.20 35.73 3.33
317 326 8.177663 CGCAACAGTAGATACTTGATTTTCAAT 58.822 33.333 0.00 0.00 35.59 2.57
333 342 6.579666 TTTTCAATGGTCATCTGGAGAAAG 57.420 37.500 0.00 0.00 0.00 2.62
337 346 6.306199 TCAATGGTCATCTGGAGAAAGAAAA 58.694 36.000 0.00 0.00 0.00 2.29
338 347 6.777091 TCAATGGTCATCTGGAGAAAGAAAAA 59.223 34.615 0.00 0.00 0.00 1.94
548 557 6.743575 ATTAACTTTGCTAGTCACCACATC 57.256 37.500 0.00 0.00 35.54 3.06
565 574 7.771361 TCACCACATCTAACAAAAGTAACAGAA 59.229 33.333 0.00 0.00 0.00 3.02
733 743 2.580962 TGTTTGCAGAAGCCATGTGTA 58.419 42.857 0.00 0.00 41.13 2.90
1061 1075 6.880942 TTGATGTTCATGACAACATTCTGA 57.119 33.333 13.04 0.33 45.23 3.27
1309 1323 8.588290 TGATGGCTTATAAACACTAAAATGGT 57.412 30.769 0.00 0.00 0.00 3.55
1578 3658 0.477597 ACTTCCCTCAATCCCCACCA 60.478 55.000 0.00 0.00 0.00 4.17
1830 3920 7.262772 GCATGTTCTACTGGTAAGTACATACA 58.737 38.462 10.21 0.00 33.35 2.29
1871 3961 7.964604 CTAGTTTTGCTAGGGGTAATACATC 57.035 40.000 0.00 0.00 42.63 3.06
1872 3962 6.321821 AGTTTTGCTAGGGGTAATACATCA 57.678 37.500 0.00 0.00 0.00 3.07
1873 3963 6.911308 AGTTTTGCTAGGGGTAATACATCAT 58.089 36.000 0.00 0.00 0.00 2.45
2045 4139 5.872070 TGCAAGGTTACCTTTTGACTTTTTG 59.128 36.000 14.80 0.86 41.69 2.44
2238 4332 8.690203 TTCTTATGCCATTGCTATAGCTTTTA 57.310 30.769 24.61 8.75 42.66 1.52
2309 4412 2.806945 TCATGCCCTCAAACCTAAGG 57.193 50.000 0.00 0.00 0.00 2.69
2388 4491 4.475944 AGCACAACAAATCTATGCGAAAC 58.524 39.130 0.00 0.00 41.23 2.78
2557 4660 3.181450 CCCCAGCCGATAAGAAGAAGATT 60.181 47.826 0.00 0.00 0.00 2.40
2563 4666 3.180584 CCGATAAGAAGAAGATTGACGCG 59.819 47.826 3.53 3.53 0.00 6.01
2609 4712 1.350071 AGCAAAATGTTGGGGCATCA 58.650 45.000 0.00 0.00 35.10 3.07
2631 4735 3.840831 TGCCAGATGTAGCACAGAC 57.159 52.632 0.00 0.00 33.08 3.51
2655 4760 1.215173 TGAATATTGGGCTCCAGGTGG 59.785 52.381 0.00 0.00 33.81 4.61
2663 4768 1.153208 GCTCCAGGTGGCATGAGAG 60.153 63.158 0.00 6.49 34.44 3.20
2754 4859 3.049912 GTTTTGTCACCTGCGGAAATTC 58.950 45.455 0.00 0.00 0.00 2.17
2912 5168 5.842907 GGGGGAATCATTTGCAACTTATAC 58.157 41.667 0.00 0.00 0.00 1.47
2914 5170 6.461509 GGGGGAATCATTTGCAACTTATACTG 60.462 42.308 0.00 0.00 0.00 2.74
2919 5204 6.509418 TCATTTGCAACTTATACTGGTTCC 57.491 37.500 0.00 0.00 0.00 3.62
2937 5222 4.202284 GGTTCCTTTTTGGGGGTAAGTTTC 60.202 45.833 0.00 0.00 36.20 2.78
2955 5240 5.874093 AGTTTCCAGATGAGAAGTTGATGT 58.126 37.500 0.00 0.00 0.00 3.06
3114 5404 7.448748 TGGAAATTTCTAGGAGCTTGTAAAC 57.551 36.000 17.42 0.00 0.00 2.01
3119 5409 9.967346 AAATTTCTAGGAGCTTGTAAACTTTTC 57.033 29.630 0.00 0.00 0.00 2.29
3147 5437 1.045911 ATGACTTCGGGGGAGCTCTC 61.046 60.000 14.64 10.01 0.00 3.20
3254 5544 7.408756 TTGAATTTAATGTTCATCTGGGAGG 57.591 36.000 5.07 0.00 35.68 4.30
3267 5557 0.033109 TGGGAGGAGATGAGCTCGAA 60.033 55.000 9.64 0.00 44.91 3.71
3440 5743 6.291648 TCATCAGATAACTATCATCAGCCC 57.708 41.667 0.00 0.00 35.17 5.19
3441 5744 5.781818 TCATCAGATAACTATCATCAGCCCA 59.218 40.000 0.00 0.00 35.17 5.36
3442 5745 6.270695 TCATCAGATAACTATCATCAGCCCAA 59.729 38.462 0.00 0.00 35.17 4.12
3443 5746 6.106648 TCAGATAACTATCATCAGCCCAAG 57.893 41.667 0.00 0.00 35.17 3.61
3444 5747 5.840693 TCAGATAACTATCATCAGCCCAAGA 59.159 40.000 0.00 0.00 35.17 3.02
3445 5748 5.931146 CAGATAACTATCATCAGCCCAAGAC 59.069 44.000 0.00 0.00 35.17 3.01
3446 5749 5.843421 AGATAACTATCATCAGCCCAAGACT 59.157 40.000 0.00 0.00 35.17 3.24
3447 5750 7.013220 AGATAACTATCATCAGCCCAAGACTA 58.987 38.462 0.00 0.00 35.17 2.59
3448 5751 4.946478 ACTATCATCAGCCCAAGACTAC 57.054 45.455 0.00 0.00 0.00 2.73
3449 5752 4.290093 ACTATCATCAGCCCAAGACTACA 58.710 43.478 0.00 0.00 0.00 2.74
3450 5753 4.716784 ACTATCATCAGCCCAAGACTACAA 59.283 41.667 0.00 0.00 0.00 2.41
3451 5754 4.785346 ATCATCAGCCCAAGACTACAAT 57.215 40.909 0.00 0.00 0.00 2.71
3452 5755 5.894298 ATCATCAGCCCAAGACTACAATA 57.106 39.130 0.00 0.00 0.00 1.90
3453 5756 5.282055 TCATCAGCCCAAGACTACAATAG 57.718 43.478 0.00 0.00 0.00 1.73
3454 5757 4.962362 TCATCAGCCCAAGACTACAATAGA 59.038 41.667 0.00 0.00 0.00 1.98
3455 5758 5.425217 TCATCAGCCCAAGACTACAATAGAA 59.575 40.000 0.00 0.00 0.00 2.10
3456 5759 5.344743 TCAGCCCAAGACTACAATAGAAG 57.655 43.478 0.00 0.00 0.00 2.85
3457 5760 3.873952 CAGCCCAAGACTACAATAGAAGC 59.126 47.826 0.00 0.00 0.00 3.86
3458 5761 3.777522 AGCCCAAGACTACAATAGAAGCT 59.222 43.478 0.00 0.00 0.00 3.74
3459 5762 3.873952 GCCCAAGACTACAATAGAAGCTG 59.126 47.826 0.00 0.00 0.00 4.24
3460 5763 4.446371 CCCAAGACTACAATAGAAGCTGG 58.554 47.826 0.00 0.00 0.00 4.85
3461 5764 4.446371 CCAAGACTACAATAGAAGCTGGG 58.554 47.826 0.00 0.00 0.00 4.45
3462 5765 3.828875 AGACTACAATAGAAGCTGGGC 57.171 47.619 0.00 0.00 0.00 5.36
3463 5766 3.107601 AGACTACAATAGAAGCTGGGCA 58.892 45.455 0.00 0.00 0.00 5.36
3464 5767 3.519510 AGACTACAATAGAAGCTGGGCAA 59.480 43.478 0.00 0.00 0.00 4.52
3465 5768 4.019321 AGACTACAATAGAAGCTGGGCAAA 60.019 41.667 0.00 0.00 0.00 3.68
3466 5769 4.265073 ACTACAATAGAAGCTGGGCAAAG 58.735 43.478 0.00 0.00 0.00 2.77
3467 5770 2.450476 ACAATAGAAGCTGGGCAAAGG 58.550 47.619 0.00 0.00 0.00 3.11
3468 5771 2.041620 ACAATAGAAGCTGGGCAAAGGA 59.958 45.455 0.00 0.00 0.00 3.36
3469 5772 3.294214 CAATAGAAGCTGGGCAAAGGAT 58.706 45.455 0.00 0.00 0.00 3.24
3470 5773 4.079787 ACAATAGAAGCTGGGCAAAGGATA 60.080 41.667 0.00 0.00 0.00 2.59
3471 5774 2.725221 AGAAGCTGGGCAAAGGATAG 57.275 50.000 0.00 0.00 0.00 2.08
3472 5775 2.200081 AGAAGCTGGGCAAAGGATAGA 58.800 47.619 0.00 0.00 0.00 1.98
3473 5776 2.578021 AGAAGCTGGGCAAAGGATAGAA 59.422 45.455 0.00 0.00 0.00 2.10
3474 5777 2.725221 AGCTGGGCAAAGGATAGAAG 57.275 50.000 0.00 0.00 0.00 2.85
3475 5778 2.200081 AGCTGGGCAAAGGATAGAAGA 58.800 47.619 0.00 0.00 0.00 2.87
3476 5779 2.578021 AGCTGGGCAAAGGATAGAAGAA 59.422 45.455 0.00 0.00 0.00 2.52
3477 5780 3.203934 AGCTGGGCAAAGGATAGAAGAAT 59.796 43.478 0.00 0.00 0.00 2.40
3478 5781 4.413520 AGCTGGGCAAAGGATAGAAGAATA 59.586 41.667 0.00 0.00 0.00 1.75
3479 5782 4.759183 GCTGGGCAAAGGATAGAAGAATAG 59.241 45.833 0.00 0.00 0.00 1.73
3480 5783 5.455326 GCTGGGCAAAGGATAGAAGAATAGA 60.455 44.000 0.00 0.00 0.00 1.98
3481 5784 6.575244 TGGGCAAAGGATAGAAGAATAGAA 57.425 37.500 0.00 0.00 0.00 2.10
3482 5785 6.969043 TGGGCAAAGGATAGAAGAATAGAAA 58.031 36.000 0.00 0.00 0.00 2.52
3483 5786 7.410174 TGGGCAAAGGATAGAAGAATAGAAAA 58.590 34.615 0.00 0.00 0.00 2.29
3484 5787 7.893302 TGGGCAAAGGATAGAAGAATAGAAAAA 59.107 33.333 0.00 0.00 0.00 1.94
3485 5788 8.918116 GGGCAAAGGATAGAAGAATAGAAAAAT 58.082 33.333 0.00 0.00 0.00 1.82
3486 5789 9.741647 GGCAAAGGATAGAAGAATAGAAAAATG 57.258 33.333 0.00 0.00 0.00 2.32
3496 5799 8.518702 AGAAGAATAGAAAAATGAAGTTGGAGC 58.481 33.333 0.00 0.00 0.00 4.70
3497 5800 7.163001 AGAATAGAAAAATGAAGTTGGAGCC 57.837 36.000 0.00 0.00 0.00 4.70
3498 5801 3.923017 AGAAAAATGAAGTTGGAGCCG 57.077 42.857 0.00 0.00 0.00 5.52
3499 5802 3.222603 AGAAAAATGAAGTTGGAGCCGT 58.777 40.909 0.00 0.00 0.00 5.68
3500 5803 3.636764 AGAAAAATGAAGTTGGAGCCGTT 59.363 39.130 0.00 0.00 0.00 4.44
3501 5804 3.369546 AAAATGAAGTTGGAGCCGTTG 57.630 42.857 0.00 0.00 0.00 4.10
3502 5805 1.247567 AATGAAGTTGGAGCCGTTGG 58.752 50.000 0.00 0.00 0.00 3.77
3503 5806 0.400213 ATGAAGTTGGAGCCGTTGGA 59.600 50.000 0.00 0.00 0.00 3.53
3504 5807 0.400213 TGAAGTTGGAGCCGTTGGAT 59.600 50.000 0.00 0.00 0.00 3.41
3505 5808 1.087501 GAAGTTGGAGCCGTTGGATC 58.912 55.000 0.00 0.00 37.39 3.36
3513 5816 2.222027 GAGCCGTTGGATCCTTAATGG 58.778 52.381 14.23 15.15 31.04 3.16
3526 5829 5.843019 TCCTTAATGGAGACTTCAGGTTT 57.157 39.130 0.00 0.00 40.56 3.27
3527 5830 5.560724 TCCTTAATGGAGACTTCAGGTTTG 58.439 41.667 0.00 0.00 40.56 2.93
3528 5831 5.309543 TCCTTAATGGAGACTTCAGGTTTGA 59.690 40.000 0.00 0.00 40.56 2.69
3529 5832 6.003950 CCTTAATGGAGACTTCAGGTTTGAA 58.996 40.000 0.00 0.00 38.37 2.69
3530 5833 6.490040 CCTTAATGGAGACTTCAGGTTTGAAA 59.510 38.462 0.00 0.00 39.42 2.69
3531 5834 7.177392 CCTTAATGGAGACTTCAGGTTTGAAAT 59.823 37.037 0.00 0.00 39.42 2.17
3532 5835 5.972107 ATGGAGACTTCAGGTTTGAAATG 57.028 39.130 0.00 0.00 42.48 2.32
3533 5836 4.792068 TGGAGACTTCAGGTTTGAAATGT 58.208 39.130 0.00 0.00 42.48 2.71
3534 5837 5.200483 TGGAGACTTCAGGTTTGAAATGTT 58.800 37.500 0.00 0.00 42.48 2.71
3535 5838 6.361433 TGGAGACTTCAGGTTTGAAATGTTA 58.639 36.000 0.00 0.00 42.48 2.41
3536 5839 6.486657 TGGAGACTTCAGGTTTGAAATGTTAG 59.513 38.462 0.00 0.00 42.48 2.34
3537 5840 6.072452 GGAGACTTCAGGTTTGAAATGTTAGG 60.072 42.308 0.00 0.00 42.48 2.69
3538 5841 5.241728 AGACTTCAGGTTTGAAATGTTAGGC 59.758 40.000 0.00 0.00 42.48 3.93
3539 5842 5.140454 ACTTCAGGTTTGAAATGTTAGGCT 58.860 37.500 0.00 0.00 42.48 4.58
3540 5843 5.010012 ACTTCAGGTTTGAAATGTTAGGCTG 59.990 40.000 0.00 0.00 42.48 4.85
3541 5844 3.826157 TCAGGTTTGAAATGTTAGGCTGG 59.174 43.478 0.00 0.00 0.00 4.85
3542 5845 3.573967 CAGGTTTGAAATGTTAGGCTGGT 59.426 43.478 0.00 0.00 0.00 4.00
3543 5846 3.573967 AGGTTTGAAATGTTAGGCTGGTG 59.426 43.478 0.00 0.00 0.00 4.17
3544 5847 3.572255 GGTTTGAAATGTTAGGCTGGTGA 59.428 43.478 0.00 0.00 0.00 4.02
3545 5848 4.220602 GGTTTGAAATGTTAGGCTGGTGAT 59.779 41.667 0.00 0.00 0.00 3.06
3546 5849 5.279456 GGTTTGAAATGTTAGGCTGGTGATT 60.279 40.000 0.00 0.00 0.00 2.57
3547 5850 6.223120 GTTTGAAATGTTAGGCTGGTGATTT 58.777 36.000 0.00 0.00 0.00 2.17
3548 5851 5.643379 TGAAATGTTAGGCTGGTGATTTC 57.357 39.130 0.00 6.70 32.73 2.17
3549 5852 5.324409 TGAAATGTTAGGCTGGTGATTTCT 58.676 37.500 16.91 0.00 33.11 2.52
3550 5853 5.183713 TGAAATGTTAGGCTGGTGATTTCTG 59.816 40.000 16.91 0.00 33.11 3.02
3551 5854 3.788227 TGTTAGGCTGGTGATTTCTGT 57.212 42.857 0.00 0.00 0.00 3.41
3552 5855 3.411446 TGTTAGGCTGGTGATTTCTGTG 58.589 45.455 0.00 0.00 0.00 3.66
3553 5856 3.181445 TGTTAGGCTGGTGATTTCTGTGT 60.181 43.478 0.00 0.00 0.00 3.72
3554 5857 4.041075 TGTTAGGCTGGTGATTTCTGTGTA 59.959 41.667 0.00 0.00 0.00 2.90
3555 5858 3.059352 AGGCTGGTGATTTCTGTGTAC 57.941 47.619 0.00 0.00 0.00 2.90
3556 5859 2.639839 AGGCTGGTGATTTCTGTGTACT 59.360 45.455 0.00 0.00 0.00 2.73
3557 5860 3.073062 AGGCTGGTGATTTCTGTGTACTT 59.927 43.478 0.00 0.00 0.00 2.24
3558 5861 3.821033 GGCTGGTGATTTCTGTGTACTTT 59.179 43.478 0.00 0.00 0.00 2.66
3559 5862 4.278419 GGCTGGTGATTTCTGTGTACTTTT 59.722 41.667 0.00 0.00 0.00 2.27
3560 5863 5.215160 GCTGGTGATTTCTGTGTACTTTTG 58.785 41.667 0.00 0.00 0.00 2.44
3561 5864 5.181690 TGGTGATTTCTGTGTACTTTTGC 57.818 39.130 0.00 0.00 0.00 3.68
3562 5865 4.219033 GGTGATTTCTGTGTACTTTTGCG 58.781 43.478 0.00 0.00 0.00 4.85
3563 5866 4.219033 GTGATTTCTGTGTACTTTTGCGG 58.781 43.478 0.00 0.00 0.00 5.69
3564 5867 4.024387 GTGATTTCTGTGTACTTTTGCGGA 60.024 41.667 0.00 0.00 0.00 5.54
3565 5868 4.576873 TGATTTCTGTGTACTTTTGCGGAA 59.423 37.500 0.00 0.00 0.00 4.30
3566 5869 4.966965 TTTCTGTGTACTTTTGCGGAAA 57.033 36.364 0.00 0.00 34.88 3.13
3577 5880 2.665603 GCGGAAAGCTCCCTGAGT 59.334 61.111 0.00 0.00 44.04 3.41
3578 5881 1.898154 GCGGAAAGCTCCCTGAGTA 59.102 57.895 0.00 0.00 44.04 2.59
3579 5882 0.249398 GCGGAAAGCTCCCTGAGTAA 59.751 55.000 0.00 0.00 44.04 2.24
3580 5883 1.134371 GCGGAAAGCTCCCTGAGTAAT 60.134 52.381 0.00 0.00 44.04 1.89
3581 5884 2.681097 GCGGAAAGCTCCCTGAGTAATT 60.681 50.000 0.00 0.00 44.04 1.40
3582 5885 2.939103 CGGAAAGCTCCCTGAGTAATTG 59.061 50.000 0.00 0.00 38.71 2.32
3583 5886 2.685388 GGAAAGCTCCCTGAGTAATTGC 59.315 50.000 0.00 0.00 35.42 3.56
3584 5887 3.615155 GAAAGCTCCCTGAGTAATTGCT 58.385 45.455 0.00 0.00 31.39 3.91
3585 5888 4.384208 GGAAAGCTCCCTGAGTAATTGCTA 60.384 45.833 0.00 0.00 35.42 3.49
3586 5889 5.372373 GAAAGCTCCCTGAGTAATTGCTAT 58.628 41.667 0.00 0.00 31.39 2.97
3587 5890 6.464465 GGAAAGCTCCCTGAGTAATTGCTATA 60.464 42.308 0.00 0.00 35.42 1.31
3588 5891 6.694445 AAGCTCCCTGAGTAATTGCTATAT 57.306 37.500 0.00 0.00 31.39 0.86
3589 5892 7.798710 AAGCTCCCTGAGTAATTGCTATATA 57.201 36.000 0.00 0.00 31.39 0.86
3590 5893 7.176589 AGCTCCCTGAGTAATTGCTATATAC 57.823 40.000 0.00 0.00 31.39 1.47
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 43 5.041015 ACATACATAGGACCCAAACCCTAA 58.959 41.667 0.00 0.00 38.42 2.69
41 44 4.410883 CACATACATAGGACCCAAACCCTA 59.589 45.833 0.00 0.00 39.18 3.53
82 85 4.518211 GCTGTCTAATTCATGCCATTAGCT 59.482 41.667 15.01 0.00 44.23 3.32
127 130 0.952497 AGTGCCTGACTGTTGATGCG 60.952 55.000 0.00 0.00 31.75 4.73
134 137 4.081420 CCTGACTAAATAGTGCCTGACTGT 60.081 45.833 0.00 0.00 36.50 3.55
154 157 7.543520 GCCTTCTTTGATTTAAATGACTTCCTG 59.456 37.037 5.17 0.00 0.00 3.86
221 230 4.032960 AGGACTTGGAACATATGCAACA 57.967 40.909 1.58 0.00 39.30 3.33
223 232 5.045942 TCTGTAGGACTTGGAACATATGCAA 60.046 40.000 1.58 0.00 39.30 4.08
224 233 4.469586 TCTGTAGGACTTGGAACATATGCA 59.530 41.667 1.58 0.00 39.30 3.96
225 234 5.023533 TCTGTAGGACTTGGAACATATGC 57.976 43.478 1.58 0.00 39.30 3.14
226 235 9.784531 ATAATTCTGTAGGACTTGGAACATATG 57.215 33.333 0.00 0.00 39.30 1.78
229 238 9.533831 AAAATAATTCTGTAGGACTTGGAACAT 57.466 29.630 0.00 0.00 39.30 2.71
230 239 8.792633 CAAAATAATTCTGTAGGACTTGGAACA 58.207 33.333 0.00 0.00 0.00 3.18
231 240 8.244113 CCAAAATAATTCTGTAGGACTTGGAAC 58.756 37.037 0.00 0.00 33.03 3.62
232 241 7.093945 GCCAAAATAATTCTGTAGGACTTGGAA 60.094 37.037 0.00 0.00 33.03 3.53
282 291 1.626654 CTACTGTTGCGGCTTGACGG 61.627 60.000 0.00 5.36 0.00 4.79
317 326 5.532406 CAGTTTTTCTTTCTCCAGATGACCA 59.468 40.000 0.00 0.00 0.00 4.02
548 557 7.254852 TGCCTGTTTTCTGTTACTTTTGTTAG 58.745 34.615 0.00 0.00 0.00 2.34
565 574 5.507985 GCTCTCTTTGTATGTTTGCCTGTTT 60.508 40.000 0.00 0.00 0.00 2.83
641 650 3.458189 GAGTGGGTGGAATCTACATTCG 58.542 50.000 0.00 0.00 39.64 3.34
709 718 4.039004 ACACATGGCTTCTGCAAACATTTA 59.961 37.500 0.00 0.00 41.91 1.40
785 795 7.056844 AGCCCAAGAGACTATACTTACAATC 57.943 40.000 0.00 0.00 0.00 2.67
830 840 4.678509 AAAGCAAGCGTATTCGAATGAA 57.321 36.364 20.87 0.00 39.71 2.57
837 847 5.476752 AGAGATCAAAAGCAAGCGTATTC 57.523 39.130 0.00 0.00 0.00 1.75
1061 1075 6.653020 TCATGTTAACAGCACATCTTCCTAT 58.347 36.000 14.65 0.00 32.25 2.57
1357 1387 6.615088 ACACTAGCAGCATATGAAAAACAAG 58.385 36.000 6.97 0.00 0.00 3.16
1358 1388 6.573664 ACACTAGCAGCATATGAAAAACAA 57.426 33.333 6.97 0.00 0.00 2.83
1578 3658 3.191371 CGCAAAAGATAGCCAGACCTTTT 59.809 43.478 0.00 0.00 38.81 2.27
1627 3708 5.047590 ACTGCTCATGCTTTCATTTCATGAA 60.048 36.000 3.38 3.38 43.88 2.57
2015 4109 0.251165 AAGGTAACCTTGCATGCCGT 60.251 50.000 16.68 5.75 42.96 5.68
2059 4153 8.642432 TCCCTAGTCTATATTGACAAAGTGATG 58.358 37.037 17.69 4.33 39.27 3.07
2255 4349 4.207891 ACCTGCAGTGTAGATGGTTAAG 57.792 45.455 13.81 0.00 0.00 1.85
2261 4355 5.050490 GGTGTATAACCTGCAGTGTAGATG 58.950 45.833 13.81 0.00 46.55 2.90
2262 4356 5.277857 GGTGTATAACCTGCAGTGTAGAT 57.722 43.478 13.81 9.65 46.55 1.98
2557 4660 1.213013 GCTCTTCTTCCTCGCGTCA 59.787 57.895 5.77 0.00 0.00 4.35
2563 4666 4.799564 TCTCTTCAAGCTCTTCTTCCTC 57.200 45.455 0.00 0.00 31.27 3.71
2631 4735 2.816087 CCTGGAGCCCAATATTCATTCG 59.184 50.000 0.00 0.00 30.80 3.34
2655 4760 2.827642 GCACCTGCCCTCTCATGC 60.828 66.667 0.00 0.00 34.31 4.06
2754 4859 5.618056 ACACAAGTGTTGATGCAAGATAG 57.382 39.130 0.00 0.00 41.83 2.08
2890 5146 6.461509 CCAGTATAAGTTGCAAATGATTCCCC 60.462 42.308 1.30 0.00 0.00 4.81
2908 5164 3.663632 ACCCCCAAAAAGGAACCAGTATA 59.336 43.478 0.00 0.00 41.22 1.47
2910 5166 1.860906 ACCCCCAAAAAGGAACCAGTA 59.139 47.619 0.00 0.00 41.22 2.74
2911 5167 0.639943 ACCCCCAAAAAGGAACCAGT 59.360 50.000 0.00 0.00 41.22 4.00
2912 5168 2.687003 TACCCCCAAAAAGGAACCAG 57.313 50.000 0.00 0.00 41.22 4.00
2914 5170 2.966915 ACTTACCCCCAAAAAGGAACC 58.033 47.619 0.00 0.00 41.22 3.62
2919 5204 4.219919 TCTGGAAACTTACCCCCAAAAAG 58.780 43.478 0.00 0.00 0.00 2.27
2937 5222 3.854666 ACGACATCAACTTCTCATCTGG 58.145 45.455 0.00 0.00 0.00 3.86
2955 5240 4.202274 TGTTCTCCCAGAAACACAATACGA 60.202 41.667 0.00 0.00 35.75 3.43
2983 5268 2.657237 CTCGGGTGGAGAAACGCT 59.343 61.111 0.00 0.00 46.23 5.07
3147 5437 2.712057 AGACGCTGGAAAGCAAAATG 57.288 45.000 0.00 0.00 34.41 2.32
3184 5474 9.985730 AGATGATAAAATTTTCTGAAGTTTGCA 57.014 25.926 6.72 0.00 0.00 4.08
3254 5544 1.405105 AGCTGAGTTCGAGCTCATCTC 59.595 52.381 28.84 20.47 43.54 2.75
3267 5557 3.396685 AGAAGTATCCAGGAGCTGAGT 57.603 47.619 0.00 0.00 32.44 3.41
3440 5743 3.873952 GCCCAGCTTCTATTGTAGTCTTG 59.126 47.826 0.00 0.00 0.00 3.02
3441 5744 3.519510 TGCCCAGCTTCTATTGTAGTCTT 59.480 43.478 0.00 0.00 0.00 3.01
3442 5745 3.107601 TGCCCAGCTTCTATTGTAGTCT 58.892 45.455 0.00 0.00 0.00 3.24
3443 5746 3.543680 TGCCCAGCTTCTATTGTAGTC 57.456 47.619 0.00 0.00 0.00 2.59
3444 5747 4.265073 CTTTGCCCAGCTTCTATTGTAGT 58.735 43.478 0.00 0.00 0.00 2.73
3445 5748 3.629398 CCTTTGCCCAGCTTCTATTGTAG 59.371 47.826 0.00 0.00 0.00 2.74
3446 5749 3.265737 TCCTTTGCCCAGCTTCTATTGTA 59.734 43.478 0.00 0.00 0.00 2.41
3447 5750 2.041620 TCCTTTGCCCAGCTTCTATTGT 59.958 45.455 0.00 0.00 0.00 2.71
3448 5751 2.726821 TCCTTTGCCCAGCTTCTATTG 58.273 47.619 0.00 0.00 0.00 1.90
3449 5752 3.677156 ATCCTTTGCCCAGCTTCTATT 57.323 42.857 0.00 0.00 0.00 1.73
3450 5753 3.976654 TCTATCCTTTGCCCAGCTTCTAT 59.023 43.478 0.00 0.00 0.00 1.98
3451 5754 3.384168 TCTATCCTTTGCCCAGCTTCTA 58.616 45.455 0.00 0.00 0.00 2.10
3452 5755 2.200081 TCTATCCTTTGCCCAGCTTCT 58.800 47.619 0.00 0.00 0.00 2.85
3453 5756 2.717639 TCTATCCTTTGCCCAGCTTC 57.282 50.000 0.00 0.00 0.00 3.86
3454 5757 2.578021 TCTTCTATCCTTTGCCCAGCTT 59.422 45.455 0.00 0.00 0.00 3.74
3455 5758 2.200081 TCTTCTATCCTTTGCCCAGCT 58.800 47.619 0.00 0.00 0.00 4.24
3456 5759 2.717639 TCTTCTATCCTTTGCCCAGC 57.282 50.000 0.00 0.00 0.00 4.85
3457 5760 6.179906 TCTATTCTTCTATCCTTTGCCCAG 57.820 41.667 0.00 0.00 0.00 4.45
3458 5761 6.575244 TTCTATTCTTCTATCCTTTGCCCA 57.425 37.500 0.00 0.00 0.00 5.36
3459 5762 7.881775 TTTTCTATTCTTCTATCCTTTGCCC 57.118 36.000 0.00 0.00 0.00 5.36
3460 5763 9.741647 CATTTTTCTATTCTTCTATCCTTTGCC 57.258 33.333 0.00 0.00 0.00 4.52
3470 5773 8.518702 GCTCCAACTTCATTTTTCTATTCTTCT 58.481 33.333 0.00 0.00 0.00 2.85
3471 5774 7.757173 GGCTCCAACTTCATTTTTCTATTCTTC 59.243 37.037 0.00 0.00 0.00 2.87
3472 5775 7.575720 CGGCTCCAACTTCATTTTTCTATTCTT 60.576 37.037 0.00 0.00 0.00 2.52
3473 5776 6.127897 CGGCTCCAACTTCATTTTTCTATTCT 60.128 38.462 0.00 0.00 0.00 2.40
3474 5777 6.030228 CGGCTCCAACTTCATTTTTCTATTC 58.970 40.000 0.00 0.00 0.00 1.75
3475 5778 5.476945 ACGGCTCCAACTTCATTTTTCTATT 59.523 36.000 0.00 0.00 0.00 1.73
3476 5779 5.010282 ACGGCTCCAACTTCATTTTTCTAT 58.990 37.500 0.00 0.00 0.00 1.98
3477 5780 4.394729 ACGGCTCCAACTTCATTTTTCTA 58.605 39.130 0.00 0.00 0.00 2.10
3478 5781 3.222603 ACGGCTCCAACTTCATTTTTCT 58.777 40.909 0.00 0.00 0.00 2.52
3479 5782 3.643159 ACGGCTCCAACTTCATTTTTC 57.357 42.857 0.00 0.00 0.00 2.29
3480 5783 3.492482 CCAACGGCTCCAACTTCATTTTT 60.492 43.478 0.00 0.00 0.00 1.94
3481 5784 2.035832 CCAACGGCTCCAACTTCATTTT 59.964 45.455 0.00 0.00 0.00 1.82
3482 5785 1.613437 CCAACGGCTCCAACTTCATTT 59.387 47.619 0.00 0.00 0.00 2.32
3483 5786 1.202879 TCCAACGGCTCCAACTTCATT 60.203 47.619 0.00 0.00 0.00 2.57
3484 5787 0.400213 TCCAACGGCTCCAACTTCAT 59.600 50.000 0.00 0.00 0.00 2.57
3485 5788 0.400213 ATCCAACGGCTCCAACTTCA 59.600 50.000 0.00 0.00 0.00 3.02
3486 5789 1.087501 GATCCAACGGCTCCAACTTC 58.912 55.000 0.00 0.00 0.00 3.01
3487 5790 0.322546 GGATCCAACGGCTCCAACTT 60.323 55.000 6.95 0.00 37.87 2.66
3488 5791 1.201429 AGGATCCAACGGCTCCAACT 61.201 55.000 15.82 0.00 40.20 3.16
3489 5792 0.322546 AAGGATCCAACGGCTCCAAC 60.323 55.000 15.82 0.00 40.20 3.77
3490 5793 1.281419 TAAGGATCCAACGGCTCCAA 58.719 50.000 15.82 0.00 40.20 3.53
3491 5794 1.281419 TTAAGGATCCAACGGCTCCA 58.719 50.000 15.82 0.00 40.20 3.86
3492 5795 2.222027 CATTAAGGATCCAACGGCTCC 58.778 52.381 15.82 0.00 38.20 4.70
3493 5796 2.158813 TCCATTAAGGATCCAACGGCTC 60.159 50.000 15.82 0.00 43.07 4.70
3494 5797 1.843851 TCCATTAAGGATCCAACGGCT 59.156 47.619 15.82 0.00 43.07 5.52
3495 5798 2.341846 TCCATTAAGGATCCAACGGC 57.658 50.000 15.82 0.00 43.07 5.68
3503 5806 7.476231 TTCAAACCTGAAGTCTCCATTAAGGAT 60.476 37.037 0.00 0.00 40.24 3.24
3504 5807 5.309543 TCAAACCTGAAGTCTCCATTAAGGA 59.690 40.000 0.00 0.00 46.75 3.36
3505 5808 5.560724 TCAAACCTGAAGTCTCCATTAAGG 58.439 41.667 0.00 0.00 34.75 2.69
3506 5809 7.510549 TTTCAAACCTGAAGTCTCCATTAAG 57.489 36.000 0.00 0.00 42.48 1.85
3507 5810 7.505585 ACATTTCAAACCTGAAGTCTCCATTAA 59.494 33.333 0.00 0.00 42.48 1.40
3508 5811 7.004086 ACATTTCAAACCTGAAGTCTCCATTA 58.996 34.615 0.00 0.00 42.48 1.90
3509 5812 5.835280 ACATTTCAAACCTGAAGTCTCCATT 59.165 36.000 0.00 0.00 42.48 3.16
3510 5813 5.388654 ACATTTCAAACCTGAAGTCTCCAT 58.611 37.500 0.00 0.00 42.48 3.41
3511 5814 4.792068 ACATTTCAAACCTGAAGTCTCCA 58.208 39.130 0.00 0.00 42.48 3.86
3512 5815 5.774498 AACATTTCAAACCTGAAGTCTCC 57.226 39.130 0.00 0.00 42.48 3.71
3513 5816 6.568653 GCCTAACATTTCAAACCTGAAGTCTC 60.569 42.308 0.00 0.00 42.48 3.36
3514 5817 5.241728 GCCTAACATTTCAAACCTGAAGTCT 59.758 40.000 0.00 0.00 42.48 3.24
3515 5818 5.241728 AGCCTAACATTTCAAACCTGAAGTC 59.758 40.000 0.00 0.00 42.48 3.01
3516 5819 5.010012 CAGCCTAACATTTCAAACCTGAAGT 59.990 40.000 0.00 0.00 42.48 3.01
3517 5820 5.464168 CAGCCTAACATTTCAAACCTGAAG 58.536 41.667 0.00 0.00 42.48 3.02
3518 5821 4.280677 CCAGCCTAACATTTCAAACCTGAA 59.719 41.667 0.00 0.00 39.87 3.02
3519 5822 3.826157 CCAGCCTAACATTTCAAACCTGA 59.174 43.478 0.00 0.00 0.00 3.86
3520 5823 3.573967 ACCAGCCTAACATTTCAAACCTG 59.426 43.478 0.00 0.00 0.00 4.00
3521 5824 3.573967 CACCAGCCTAACATTTCAAACCT 59.426 43.478 0.00 0.00 0.00 3.50
3522 5825 3.572255 TCACCAGCCTAACATTTCAAACC 59.428 43.478 0.00 0.00 0.00 3.27
3523 5826 4.846779 TCACCAGCCTAACATTTCAAAC 57.153 40.909 0.00 0.00 0.00 2.93
3524 5827 6.267471 AGAAATCACCAGCCTAACATTTCAAA 59.733 34.615 9.46 0.00 34.20 2.69
3525 5828 5.774690 AGAAATCACCAGCCTAACATTTCAA 59.225 36.000 9.46 0.00 34.20 2.69
3526 5829 5.183713 CAGAAATCACCAGCCTAACATTTCA 59.816 40.000 9.46 0.00 34.20 2.69
3527 5830 5.183904 ACAGAAATCACCAGCCTAACATTTC 59.816 40.000 0.00 0.00 32.65 2.17
3528 5831 5.047802 CACAGAAATCACCAGCCTAACATTT 60.048 40.000 0.00 0.00 0.00 2.32
3529 5832 4.460382 CACAGAAATCACCAGCCTAACATT 59.540 41.667 0.00 0.00 0.00 2.71
3530 5833 4.012374 CACAGAAATCACCAGCCTAACAT 58.988 43.478 0.00 0.00 0.00 2.71
3531 5834 3.181445 ACACAGAAATCACCAGCCTAACA 60.181 43.478 0.00 0.00 0.00 2.41
3532 5835 3.412386 ACACAGAAATCACCAGCCTAAC 58.588 45.455 0.00 0.00 0.00 2.34
3533 5836 3.788227 ACACAGAAATCACCAGCCTAA 57.212 42.857 0.00 0.00 0.00 2.69
3534 5837 3.838317 AGTACACAGAAATCACCAGCCTA 59.162 43.478 0.00 0.00 0.00 3.93
3535 5838 2.639839 AGTACACAGAAATCACCAGCCT 59.360 45.455 0.00 0.00 0.00 4.58
3536 5839 3.059352 AGTACACAGAAATCACCAGCC 57.941 47.619 0.00 0.00 0.00 4.85
3537 5840 5.215160 CAAAAGTACACAGAAATCACCAGC 58.785 41.667 0.00 0.00 0.00 4.85
3538 5841 5.215160 GCAAAAGTACACAGAAATCACCAG 58.785 41.667 0.00 0.00 0.00 4.00
3539 5842 4.260990 CGCAAAAGTACACAGAAATCACCA 60.261 41.667 0.00 0.00 0.00 4.17
3540 5843 4.219033 CGCAAAAGTACACAGAAATCACC 58.781 43.478 0.00 0.00 0.00 4.02
3541 5844 4.024387 TCCGCAAAAGTACACAGAAATCAC 60.024 41.667 0.00 0.00 0.00 3.06
3542 5845 4.130857 TCCGCAAAAGTACACAGAAATCA 58.869 39.130 0.00 0.00 0.00 2.57
3543 5846 4.742438 TCCGCAAAAGTACACAGAAATC 57.258 40.909 0.00 0.00 0.00 2.17
3544 5847 5.508200 TTTCCGCAAAAGTACACAGAAAT 57.492 34.783 0.00 0.00 0.00 2.17
3545 5848 4.732355 GCTTTCCGCAAAAGTACACAGAAA 60.732 41.667 9.57 0.00 45.23 2.52
3546 5849 3.242936 GCTTTCCGCAAAAGTACACAGAA 60.243 43.478 9.57 0.00 45.23 3.02
3547 5850 2.289547 GCTTTCCGCAAAAGTACACAGA 59.710 45.455 9.57 0.00 45.23 3.41
3548 5851 2.290641 AGCTTTCCGCAAAAGTACACAG 59.709 45.455 9.57 0.00 45.23 3.66
3549 5852 2.289547 GAGCTTTCCGCAAAAGTACACA 59.710 45.455 9.57 0.00 45.23 3.72
3550 5853 2.350484 GGAGCTTTCCGCAAAAGTACAC 60.350 50.000 9.57 1.51 45.23 2.90
3551 5854 1.877443 GGAGCTTTCCGCAAAAGTACA 59.123 47.619 9.57 0.00 45.23 2.90
3552 5855 1.199327 GGGAGCTTTCCGCAAAAGTAC 59.801 52.381 9.57 0.00 45.23 2.73
3553 5856 1.073284 AGGGAGCTTTCCGCAAAAGTA 59.927 47.619 9.57 0.00 45.23 2.24
3554 5857 0.178990 AGGGAGCTTTCCGCAAAAGT 60.179 50.000 9.57 0.00 45.23 2.66
3555 5858 0.242017 CAGGGAGCTTTCCGCAAAAG 59.758 55.000 4.58 4.58 46.05 2.27
3556 5859 0.179004 TCAGGGAGCTTTCCGCAAAA 60.179 50.000 0.00 0.00 42.61 2.44
3557 5860 0.606401 CTCAGGGAGCTTTCCGCAAA 60.606 55.000 0.00 0.00 42.61 3.68
3558 5861 1.003355 CTCAGGGAGCTTTCCGCAA 60.003 57.895 0.00 0.00 42.61 4.85
3559 5862 0.902984 TACTCAGGGAGCTTTCCGCA 60.903 55.000 0.00 0.00 42.61 5.69
3560 5863 0.249398 TTACTCAGGGAGCTTTCCGC 59.751 55.000 0.00 0.00 39.57 5.54
3561 5864 2.939103 CAATTACTCAGGGAGCTTTCCG 59.061 50.000 0.00 0.00 32.04 4.30
3562 5865 2.685388 GCAATTACTCAGGGAGCTTTCC 59.315 50.000 0.00 0.00 32.04 3.13
3563 5866 3.615155 AGCAATTACTCAGGGAGCTTTC 58.385 45.455 0.00 0.00 32.04 2.62
3564 5867 3.728385 AGCAATTACTCAGGGAGCTTT 57.272 42.857 0.00 0.00 32.04 3.51
3565 5868 6.694445 ATATAGCAATTACTCAGGGAGCTT 57.306 37.500 0.00 0.00 32.04 3.74
3566 5869 7.176589 GTATATAGCAATTACTCAGGGAGCT 57.823 40.000 0.00 0.00 32.04 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.