Multiple sequence alignment - TraesCS6B01G180600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G180600 chr6B 100.000 2836 0 0 1 2836 201414448 201411613 0.000000e+00 5238.0
1 TraesCS6B01G180600 chr6B 81.859 441 60 12 118 546 9021349 9021781 1.250000e-93 353.0
2 TraesCS6B01G180600 chr6B 79.720 429 65 15 130 546 115518428 115518846 9.940000e-75 291.0
3 TraesCS6B01G180600 chr6D 94.396 910 24 10 1249 2133 112434654 112433747 0.000000e+00 1373.0
4 TraesCS6B01G180600 chr6D 92.788 624 33 6 2225 2836 112433699 112433076 0.000000e+00 893.0
5 TraesCS6B01G180600 chr6D 92.593 297 11 6 587 882 112435669 112435383 1.570000e-112 416.0
6 TraesCS6B01G180600 chr6D 95.798 238 9 1 911 1147 112435013 112434776 1.590000e-102 383.0
7 TraesCS6B01G180600 chr6D 87.013 154 15 3 2277 2425 392273073 392273226 4.860000e-38 169.0
8 TraesCS6B01G180600 chr6A 92.299 896 34 15 1250 2133 137380812 137379940 0.000000e+00 1240.0
9 TraesCS6B01G180600 chr6A 94.649 598 24 6 2244 2836 137379895 137379301 0.000000e+00 920.0
10 TraesCS6B01G180600 chr6A 89.377 546 22 8 616 1155 137381496 137380981 0.000000e+00 654.0
11 TraesCS6B01G180600 chr5B 84.932 438 45 11 118 546 148877078 148877503 9.390000e-115 424.0
12 TraesCS6B01G180600 chr5B 81.348 445 62 12 118 546 24239604 24240043 2.710000e-90 342.0
13 TraesCS6B01G180600 chr5B 79.277 415 60 12 147 547 590394245 590393843 1.670000e-67 267.0
14 TraesCS6B01G180600 chr5B 88.535 157 9 6 2277 2426 98663177 98663331 6.240000e-42 182.0
15 TraesCS6B01G180600 chr5B 78.916 166 29 2 10 169 691454584 691454419 1.070000e-19 108.0
16 TraesCS6B01G180600 chr5B 78.528 163 27 4 14 169 691454470 691454309 1.800000e-17 100.0
17 TraesCS6B01G180600 chr3B 83.565 432 52 12 124 546 762593613 762593192 1.230000e-103 387.0
18 TraesCS6B01G180600 chr4B 82.529 435 59 11 124 546 578345975 578346404 1.610000e-97 366.0
19 TraesCS6B01G180600 chr4B 82.028 434 63 8 124 546 578476023 578476452 3.470000e-94 355.0
20 TraesCS6B01G180600 chr4B 86.709 158 16 4 2273 2425 106227404 106227561 1.350000e-38 171.0
21 TraesCS6B01G180600 chr4B 92.683 41 3 0 1681 1721 398111640 398111680 3.050000e-05 60.2
22 TraesCS6B01G180600 chr4B 92.683 41 3 0 1681 1721 398119205 398119245 3.050000e-05 60.2
23 TraesCS6B01G180600 chr4B 92.683 41 3 0 1681 1721 398154237 398154277 3.050000e-05 60.2
24 TraesCS6B01G180600 chr4B 92.683 41 3 0 1681 1721 398188999 398189039 3.050000e-05 60.2
25 TraesCS6B01G180600 chr1B 80.787 432 53 20 124 546 39625561 39625971 7.630000e-81 311.0
26 TraesCS6B01G180600 chr7B 80.046 436 61 20 127 546 643746298 643745873 1.650000e-77 300.0
27 TraesCS6B01G180600 chr5D 85.787 197 21 4 10 201 514157135 514156941 4.790000e-48 202.0
28 TraesCS6B01G180600 chr5D 86.928 153 17 3 2277 2426 222429082 222428930 4.860000e-38 169.0
29 TraesCS6B01G180600 chr5D 86.792 159 12 7 2275 2425 233044438 233044595 4.860000e-38 169.0
30 TraesCS6B01G180600 chr5A 87.898 157 8 8 2278 2426 86662019 86662172 1.040000e-39 174.0
31 TraesCS6B01G180600 chr5A 83.696 184 27 3 14 195 600697280 600697098 1.350000e-38 171.0
32 TraesCS6B01G180600 chr3D 86.538 156 16 5 2275 2425 322435289 322435444 1.750000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G180600 chr6B 201411613 201414448 2835 True 5238.00 5238 100.000000 1 2836 1 chr6B.!!$R1 2835
1 TraesCS6B01G180600 chr6D 112433076 112435669 2593 True 766.25 1373 93.893750 587 2836 4 chr6D.!!$R1 2249
2 TraesCS6B01G180600 chr6A 137379301 137381496 2195 True 938.00 1240 92.108333 616 2836 3 chr6A.!!$R1 2220

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
113 114 0.038251 GCACGACCATGACTCTCACA 60.038 55.0 0.0 0.0 0.00 3.58 F
502 503 0.107456 ACTGAGAGTGTGCCAAGTGG 59.893 55.0 0.0 0.0 38.53 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1218 1640 1.250328 TTGAACTGAAGCCATGGCAG 58.750 50.0 37.18 27.28 44.88 4.85 R
2217 2720 0.036388 CGGGGAAAACAGAGCTGCTA 60.036 55.0 0.15 0.00 0.00 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.902065 CTTTCTAAAAGAGGCACGCC 57.098 50.000 0.00 0.00 0.00 5.68
20 21 1.468914 CTTTCTAAAAGAGGCACGCCC 59.531 52.381 3.95 0.00 36.58 6.13
21 22 0.398696 TTCTAAAAGAGGCACGCCCA 59.601 50.000 3.95 0.00 36.58 5.36
22 23 0.618458 TCTAAAAGAGGCACGCCCAT 59.382 50.000 3.95 0.00 36.58 4.00
23 24 0.734889 CTAAAAGAGGCACGCCCATG 59.265 55.000 3.95 0.00 36.58 3.66
24 25 1.312371 TAAAAGAGGCACGCCCATGC 61.312 55.000 3.95 0.00 45.34 4.06
30 31 4.783621 GCACGCCCATGCCTCTGA 62.784 66.667 0.00 0.00 39.86 3.27
31 32 2.191375 CACGCCCATGCCTCTGAT 59.809 61.111 0.00 0.00 0.00 2.90
32 33 2.184830 CACGCCCATGCCTCTGATG 61.185 63.158 0.00 0.00 0.00 3.07
33 34 2.593725 CGCCCATGCCTCTGATGG 60.594 66.667 0.00 0.00 40.25 3.51
34 35 2.921435 GCCCATGCCTCTGATGGA 59.079 61.111 1.63 0.00 42.81 3.41
35 36 1.228228 GCCCATGCCTCTGATGGAA 59.772 57.895 1.63 0.00 42.81 3.53
36 37 0.178970 GCCCATGCCTCTGATGGAAT 60.179 55.000 1.63 0.00 42.81 3.01
37 38 1.906990 CCCATGCCTCTGATGGAATC 58.093 55.000 1.63 0.00 42.81 2.52
49 50 2.851195 GATGGAATCATAACCGTGCCT 58.149 47.619 0.00 0.00 44.70 4.75
50 51 2.325583 TGGAATCATAACCGTGCCTC 57.674 50.000 0.00 0.00 0.00 4.70
51 52 1.837439 TGGAATCATAACCGTGCCTCT 59.163 47.619 0.00 0.00 0.00 3.69
52 53 2.158957 TGGAATCATAACCGTGCCTCTC 60.159 50.000 0.00 0.00 0.00 3.20
53 54 2.128035 GAATCATAACCGTGCCTCTCG 58.872 52.381 0.00 0.00 0.00 4.04
54 55 1.112113 ATCATAACCGTGCCTCTCGT 58.888 50.000 0.00 0.00 0.00 4.18
55 56 0.172578 TCATAACCGTGCCTCTCGTG 59.827 55.000 0.00 0.00 0.00 4.35
56 57 0.172578 CATAACCGTGCCTCTCGTGA 59.827 55.000 0.00 0.00 0.00 4.35
57 58 0.892755 ATAACCGTGCCTCTCGTGAA 59.107 50.000 0.00 0.00 0.00 3.18
58 59 0.675083 TAACCGTGCCTCTCGTGAAA 59.325 50.000 0.00 0.00 0.00 2.69
59 60 0.179067 AACCGTGCCTCTCGTGAAAA 60.179 50.000 0.00 0.00 0.00 2.29
60 61 0.179067 ACCGTGCCTCTCGTGAAAAA 60.179 50.000 0.00 0.00 0.00 1.94
83 84 7.994425 AAAACAGAAAACCCATTCTTTTTGT 57.006 28.000 2.92 0.00 37.98 2.83
84 85 7.994425 AAACAGAAAACCCATTCTTTTTGTT 57.006 28.000 1.61 0.00 37.71 2.83
85 86 7.994425 AACAGAAAACCCATTCTTTTTGTTT 57.006 28.000 0.00 0.00 37.56 2.83
86 87 7.994425 ACAGAAAACCCATTCTTTTTGTTTT 57.006 28.000 0.00 0.00 40.65 2.43
89 90 6.429791 AAAACCCATTCTTTTTGTTTTCGG 57.570 33.333 0.00 0.00 34.95 4.30
90 91 4.066646 ACCCATTCTTTTTGTTTTCGGG 57.933 40.909 0.00 0.00 37.19 5.14
91 92 3.181459 ACCCATTCTTTTTGTTTTCGGGG 60.181 43.478 0.00 0.00 35.36 5.73
92 93 3.070302 CCCATTCTTTTTGTTTTCGGGGA 59.930 43.478 0.00 0.00 33.64 4.81
93 94 4.306600 CCATTCTTTTTGTTTTCGGGGAG 58.693 43.478 0.00 0.00 0.00 4.30
94 95 4.306600 CATTCTTTTTGTTTTCGGGGAGG 58.693 43.478 0.00 0.00 0.00 4.30
95 96 1.684450 TCTTTTTGTTTTCGGGGAGGC 59.316 47.619 0.00 0.00 0.00 4.70
96 97 1.410882 CTTTTTGTTTTCGGGGAGGCA 59.589 47.619 0.00 0.00 0.00 4.75
97 98 0.747852 TTTTGTTTTCGGGGAGGCAC 59.252 50.000 0.00 0.00 0.00 5.01
98 99 1.448922 TTTGTTTTCGGGGAGGCACG 61.449 55.000 0.00 0.00 0.00 5.34
99 100 2.031465 GTTTTCGGGGAGGCACGA 59.969 61.111 0.00 0.00 37.33 4.35
100 101 2.031465 TTTTCGGGGAGGCACGAC 59.969 61.111 0.00 0.00 39.04 4.34
101 102 3.540367 TTTTCGGGGAGGCACGACC 62.540 63.158 0.00 0.00 39.04 4.79
104 105 4.838152 CGGGGAGGCACGACCATG 62.838 72.222 0.00 0.00 43.14 3.66
105 106 3.399181 GGGGAGGCACGACCATGA 61.399 66.667 0.00 0.00 43.14 3.07
106 107 2.125106 GGGAGGCACGACCATGAC 60.125 66.667 0.00 0.00 43.14 3.06
107 108 2.660064 GGGAGGCACGACCATGACT 61.660 63.158 0.00 0.00 42.22 3.41
109 110 4.120244 AGGCACGACCATGACTCT 57.880 55.556 0.00 0.00 43.14 3.24
110 111 1.893786 AGGCACGACCATGACTCTC 59.106 57.895 0.00 0.00 43.14 3.20
111 112 0.900182 AGGCACGACCATGACTCTCA 60.900 55.000 0.00 0.00 43.14 3.27
112 113 0.737715 GGCACGACCATGACTCTCAC 60.738 60.000 0.00 0.00 38.86 3.51
113 114 0.038251 GCACGACCATGACTCTCACA 60.038 55.000 0.00 0.00 0.00 3.58
114 115 1.605457 GCACGACCATGACTCTCACAA 60.605 52.381 0.00 0.00 0.00 3.33
115 116 2.754472 CACGACCATGACTCTCACAAA 58.246 47.619 0.00 0.00 0.00 2.83
116 117 3.130633 CACGACCATGACTCTCACAAAA 58.869 45.455 0.00 0.00 0.00 2.44
117 118 3.185188 CACGACCATGACTCTCACAAAAG 59.815 47.826 0.00 0.00 0.00 2.27
118 119 2.158449 CGACCATGACTCTCACAAAAGC 59.842 50.000 0.00 0.00 0.00 3.51
119 120 3.141398 GACCATGACTCTCACAAAAGCA 58.859 45.455 0.00 0.00 0.00 3.91
120 121 2.880890 ACCATGACTCTCACAAAAGCAC 59.119 45.455 0.00 0.00 0.00 4.40
121 122 2.880268 CCATGACTCTCACAAAAGCACA 59.120 45.455 0.00 0.00 0.00 4.57
122 123 3.316029 CCATGACTCTCACAAAAGCACAA 59.684 43.478 0.00 0.00 0.00 3.33
123 124 4.285292 CATGACTCTCACAAAAGCACAAC 58.715 43.478 0.00 0.00 0.00 3.32
124 125 2.682856 TGACTCTCACAAAAGCACAACC 59.317 45.455 0.00 0.00 0.00 3.77
125 126 1.670811 ACTCTCACAAAAGCACAACCG 59.329 47.619 0.00 0.00 0.00 4.44
126 127 1.670811 CTCTCACAAAAGCACAACCGT 59.329 47.619 0.00 0.00 0.00 4.83
127 128 1.400142 TCTCACAAAAGCACAACCGTG 59.600 47.619 0.00 0.00 46.56 4.94
128 129 1.400142 CTCACAAAAGCACAACCGTGA 59.600 47.619 0.00 0.00 46.80 4.35
129 130 1.131504 TCACAAAAGCACAACCGTGAC 59.868 47.619 0.00 0.00 46.80 3.67
130 131 1.132262 CACAAAAGCACAACCGTGACT 59.868 47.619 0.00 0.00 46.80 3.41
131 132 1.400494 ACAAAAGCACAACCGTGACTC 59.600 47.619 0.00 0.00 46.80 3.36
132 133 1.670811 CAAAAGCACAACCGTGACTCT 59.329 47.619 0.00 0.00 46.80 3.24
133 134 1.583054 AAAGCACAACCGTGACTCTC 58.417 50.000 0.00 0.00 46.80 3.20
134 135 0.597637 AAGCACAACCGTGACTCTCG 60.598 55.000 0.00 0.00 46.80 4.04
135 136 2.658707 GCACAACCGTGACTCTCGC 61.659 63.158 0.00 0.00 46.80 5.03
158 159 3.414700 CACAACCGTGCCTCTCGC 61.415 66.667 0.00 0.00 36.06 5.03
177 178 2.510615 CGGAAGCAAAATCGTGACTC 57.489 50.000 0.00 0.00 0.00 3.36
178 179 2.069273 CGGAAGCAAAATCGTGACTCT 58.931 47.619 0.00 0.00 0.00 3.24
179 180 2.092838 CGGAAGCAAAATCGTGACTCTC 59.907 50.000 0.00 0.00 0.00 3.20
180 181 2.092838 GGAAGCAAAATCGTGACTCTCG 59.907 50.000 0.00 0.00 0.00 4.04
181 182 1.071605 AGCAAAATCGTGACTCTCGC 58.928 50.000 0.00 0.00 0.00 5.03
189 190 3.491581 GTGACTCTCGCGAAAGGAA 57.508 52.632 14.96 0.00 0.00 3.36
190 191 1.779569 GTGACTCTCGCGAAAGGAAA 58.220 50.000 14.96 0.00 0.00 3.13
191 192 2.132762 GTGACTCTCGCGAAAGGAAAA 58.867 47.619 14.96 0.00 0.00 2.29
192 193 2.542595 GTGACTCTCGCGAAAGGAAAAA 59.457 45.455 14.96 0.00 0.00 1.94
227 228 3.446310 TTTTTCCCGTTTTCAAGAGGC 57.554 42.857 0.00 0.00 0.00 4.70
228 229 2.060050 TTTCCCGTTTTCAAGAGGCA 57.940 45.000 0.00 0.00 0.00 4.75
229 230 1.314730 TTCCCGTTTTCAAGAGGCAC 58.685 50.000 0.00 0.00 0.00 5.01
230 231 0.882927 TCCCGTTTTCAAGAGGCACG 60.883 55.000 0.00 0.00 0.00 5.34
231 232 1.574428 CCGTTTTCAAGAGGCACGG 59.426 57.895 0.00 0.00 44.07 4.94
232 233 1.082104 CGTTTTCAAGAGGCACGGC 60.082 57.895 0.00 0.00 0.00 5.68
267 268 1.753956 AGCACAATCGTGTTTTTCGC 58.246 45.000 0.00 0.00 45.50 4.70
268 269 3.409539 AAGCACAATCGTGTTTTTCGCG 61.410 45.455 0.00 0.00 43.19 5.87
285 286 3.944871 CGAAAGCAAAACTGTGCCT 57.055 47.368 0.00 0.00 46.14 4.75
286 287 1.758783 CGAAAGCAAAACTGTGCCTC 58.241 50.000 0.00 0.00 46.14 4.70
287 288 1.334869 CGAAAGCAAAACTGTGCCTCT 59.665 47.619 0.00 0.00 46.14 3.69
288 289 2.603173 CGAAAGCAAAACTGTGCCTCTC 60.603 50.000 0.00 0.00 46.14 3.20
289 290 0.947244 AAGCAAAACTGTGCCTCTCG 59.053 50.000 0.00 0.00 46.14 4.04
290 291 1.081840 GCAAAACTGTGCCTCTCGC 60.082 57.895 0.00 0.00 38.66 5.03
291 292 1.205064 CAAAACTGTGCCTCTCGCG 59.795 57.895 0.00 0.00 42.08 5.87
292 293 1.961277 AAAACTGTGCCTCTCGCGG 60.961 57.895 6.13 0.00 42.08 6.46
293 294 2.377628 AAAACTGTGCCTCTCGCGGA 62.378 55.000 6.13 1.01 42.08 5.54
294 295 2.377628 AAACTGTGCCTCTCGCGGAA 62.378 55.000 6.13 0.00 42.08 4.30
295 296 2.507992 CTGTGCCTCTCGCGGAAG 60.508 66.667 6.13 3.71 42.08 3.46
307 308 2.978010 CGGAAGCAAACCGTGGCT 60.978 61.111 7.82 0.00 44.57 4.75
311 312 3.030652 AGCAAACCGTGGCTTTCG 58.969 55.556 0.00 0.00 36.92 3.46
312 313 2.729491 GCAAACCGTGGCTTTCGC 60.729 61.111 0.00 0.00 0.00 4.70
368 369 5.996669 TTGTCGAAAAGTTAGGAAAGACC 57.003 39.130 0.00 0.00 39.35 3.85
369 370 4.053295 TGTCGAAAAGTTAGGAAAGACCG 58.947 43.478 0.00 0.00 44.74 4.79
370 371 3.431233 GTCGAAAAGTTAGGAAAGACCGG 59.569 47.826 0.00 0.00 44.74 5.28
371 372 3.070015 TCGAAAAGTTAGGAAAGACCGGT 59.930 43.478 6.92 6.92 44.74 5.28
372 373 3.185797 CGAAAAGTTAGGAAAGACCGGTG 59.814 47.826 14.63 0.00 44.74 4.94
373 374 4.383173 GAAAAGTTAGGAAAGACCGGTGA 58.617 43.478 14.63 0.00 44.74 4.02
374 375 4.426736 AAAGTTAGGAAAGACCGGTGAA 57.573 40.909 14.63 0.00 44.74 3.18
375 376 4.426736 AAGTTAGGAAAGACCGGTGAAA 57.573 40.909 14.63 0.00 44.74 2.69
376 377 4.426736 AGTTAGGAAAGACCGGTGAAAA 57.573 40.909 14.63 0.00 44.74 2.29
377 378 4.784177 AGTTAGGAAAGACCGGTGAAAAA 58.216 39.130 14.63 0.00 44.74 1.94
378 379 4.577693 AGTTAGGAAAGACCGGTGAAAAAC 59.422 41.667 14.63 7.21 44.74 2.43
379 380 2.304092 AGGAAAGACCGGTGAAAAACC 58.696 47.619 14.63 7.96 46.60 3.27
394 395 6.878908 GTGAAAAACCAAAACGTCAAAAAGA 58.121 32.000 0.00 0.00 0.00 2.52
395 396 6.788458 GTGAAAAACCAAAACGTCAAAAAGAC 59.212 34.615 0.00 0.00 44.02 3.01
396 397 5.849357 AAAACCAAAACGTCAAAAAGACC 57.151 34.783 0.00 0.00 44.66 3.85
397 398 3.513680 ACCAAAACGTCAAAAAGACCC 57.486 42.857 0.00 0.00 44.66 4.46
398 399 2.159352 ACCAAAACGTCAAAAAGACCCG 60.159 45.455 0.00 0.00 44.66 5.28
399 400 2.456010 CAAAACGTCAAAAAGACCCGG 58.544 47.619 0.00 0.00 44.66 5.73
400 401 0.382873 AAACGTCAAAAAGACCCGGC 59.617 50.000 0.00 0.00 44.66 6.13
401 402 0.748729 AACGTCAAAAAGACCCGGCA 60.749 50.000 0.00 0.00 44.66 5.69
402 403 0.748729 ACGTCAAAAAGACCCGGCAA 60.749 50.000 0.00 0.00 44.66 4.52
403 404 0.382515 CGTCAAAAAGACCCGGCAAA 59.617 50.000 0.00 0.00 44.66 3.68
404 405 1.202313 CGTCAAAAAGACCCGGCAAAA 60.202 47.619 0.00 0.00 44.66 2.44
405 406 2.735762 CGTCAAAAAGACCCGGCAAAAA 60.736 45.455 0.00 0.00 44.66 1.94
406 407 2.605818 GTCAAAAAGACCCGGCAAAAAC 59.394 45.455 0.00 0.00 41.56 2.43
407 408 1.937223 CAAAAAGACCCGGCAAAAACC 59.063 47.619 0.00 0.00 0.00 3.27
419 420 4.601621 GGCAAAAACCGTTTTAAAAGCA 57.398 36.364 9.63 0.00 35.12 3.91
420 421 4.583426 GGCAAAAACCGTTTTAAAAGCAG 58.417 39.130 9.63 0.00 35.12 4.24
421 422 4.330347 GGCAAAAACCGTTTTAAAAGCAGA 59.670 37.500 9.63 0.00 35.12 4.26
422 423 5.163844 GGCAAAAACCGTTTTAAAAGCAGAA 60.164 36.000 9.63 0.00 35.12 3.02
423 424 6.307915 GCAAAAACCGTTTTAAAAGCAGAAA 58.692 32.000 9.63 0.00 35.12 2.52
424 425 6.797513 GCAAAAACCGTTTTAAAAGCAGAAAA 59.202 30.769 9.63 0.00 35.12 2.29
425 426 7.201199 GCAAAAACCGTTTTAAAAGCAGAAAAC 60.201 33.333 9.63 0.00 40.54 2.43
429 430 4.748503 GTTTTAAAAGCAGAAAACGCGT 57.251 36.364 5.58 5.58 36.22 6.01
430 431 4.492579 GTTTTAAAAGCAGAAAACGCGTG 58.507 39.130 14.98 0.00 36.22 5.34
431 432 1.749153 TAAAAGCAGAAAACGCGTGC 58.251 45.000 14.98 12.20 37.48 5.34
432 433 1.199852 AAAAGCAGAAAACGCGTGCG 61.200 50.000 14.98 13.39 42.26 5.34
433 434 2.042520 AAAGCAGAAAACGCGTGCGA 62.043 50.000 22.32 0.00 42.26 5.10
434 435 2.042520 AAGCAGAAAACGCGTGCGAA 62.043 50.000 22.32 0.00 42.26 4.70
435 436 1.652930 GCAGAAAACGCGTGCGAAA 60.653 52.632 22.32 0.00 42.83 3.46
436 437 1.197368 GCAGAAAACGCGTGCGAAAA 61.197 50.000 22.32 0.00 42.83 2.29
437 438 1.184349 CAGAAAACGCGTGCGAAAAA 58.816 45.000 22.32 0.00 42.83 1.94
463 464 2.115343 AAACAGAATTCGGAGGGAGC 57.885 50.000 12.79 0.00 0.00 4.70
464 465 0.984230 AACAGAATTCGGAGGGAGCA 59.016 50.000 12.79 0.00 0.00 4.26
465 466 0.250513 ACAGAATTCGGAGGGAGCAC 59.749 55.000 12.79 0.00 0.00 4.40
466 467 0.462759 CAGAATTCGGAGGGAGCACC 60.463 60.000 0.00 0.00 40.67 5.01
476 477 3.986006 GGAGCACCCGACACGTGA 61.986 66.667 25.01 0.00 32.77 4.35
477 478 2.733593 GAGCACCCGACACGTGAC 60.734 66.667 25.01 16.07 32.77 3.67
478 479 4.640855 AGCACCCGACACGTGACG 62.641 66.667 28.91 28.91 32.77 4.35
479 480 4.634133 GCACCCGACACGTGACGA 62.634 66.667 35.22 0.00 35.37 4.20
480 481 2.026445 CACCCGACACGTGACGAA 59.974 61.111 35.22 0.00 35.37 3.85
481 482 1.372499 CACCCGACACGTGACGAAT 60.372 57.895 35.22 22.17 35.37 3.34
482 483 1.372499 ACCCGACACGTGACGAATG 60.372 57.895 35.22 25.22 35.37 2.67
483 484 1.081041 CCCGACACGTGACGAATGA 60.081 57.895 35.22 0.00 35.37 2.57
484 485 1.342082 CCCGACACGTGACGAATGAC 61.342 60.000 35.22 0.00 35.37 3.06
485 486 0.386858 CCGACACGTGACGAATGACT 60.387 55.000 35.22 5.58 35.37 3.41
486 487 0.702924 CGACACGTGACGAATGACTG 59.297 55.000 31.37 0.00 35.37 3.51
487 488 1.662026 CGACACGTGACGAATGACTGA 60.662 52.381 31.37 0.00 35.37 3.41
488 489 1.979469 GACACGTGACGAATGACTGAG 59.021 52.381 25.01 0.00 0.00 3.35
489 490 1.607148 ACACGTGACGAATGACTGAGA 59.393 47.619 25.01 0.00 0.00 3.27
490 491 2.245942 CACGTGACGAATGACTGAGAG 58.754 52.381 13.70 0.00 0.00 3.20
491 492 1.880675 ACGTGACGAATGACTGAGAGT 59.119 47.619 13.70 0.00 0.00 3.24
492 493 2.245942 CGTGACGAATGACTGAGAGTG 58.754 52.381 0.00 0.00 0.00 3.51
493 494 2.350868 CGTGACGAATGACTGAGAGTGT 60.351 50.000 0.00 0.00 0.00 3.55
494 495 2.983136 GTGACGAATGACTGAGAGTGTG 59.017 50.000 0.00 0.00 0.00 3.82
495 496 1.989165 GACGAATGACTGAGAGTGTGC 59.011 52.381 0.00 0.00 0.00 4.57
496 497 1.337260 ACGAATGACTGAGAGTGTGCC 60.337 52.381 0.00 0.00 0.00 5.01
497 498 1.337167 CGAATGACTGAGAGTGTGCCA 60.337 52.381 0.00 0.00 0.00 4.92
498 499 2.771089 GAATGACTGAGAGTGTGCCAA 58.229 47.619 0.00 0.00 0.00 4.52
499 500 2.469274 ATGACTGAGAGTGTGCCAAG 57.531 50.000 0.00 0.00 0.00 3.61
500 501 1.123077 TGACTGAGAGTGTGCCAAGT 58.877 50.000 0.00 0.00 0.00 3.16
501 502 1.202568 TGACTGAGAGTGTGCCAAGTG 60.203 52.381 0.00 0.00 0.00 3.16
502 503 0.107456 ACTGAGAGTGTGCCAAGTGG 59.893 55.000 0.00 0.00 38.53 4.00
512 513 2.047274 CCAAGTGGCGGTGATCGT 60.047 61.111 0.00 0.00 41.72 3.73
513 514 1.671054 CCAAGTGGCGGTGATCGTT 60.671 57.895 0.00 0.00 41.72 3.85
514 515 1.497278 CAAGTGGCGGTGATCGTTG 59.503 57.895 0.00 0.00 41.72 4.10
515 516 2.325082 AAGTGGCGGTGATCGTTGC 61.325 57.895 0.00 0.00 41.72 4.17
516 517 4.147322 GTGGCGGTGATCGTTGCG 62.147 66.667 0.00 0.00 41.72 4.85
517 518 4.365505 TGGCGGTGATCGTTGCGA 62.366 61.111 0.00 0.00 41.72 5.10
518 519 3.554692 GGCGGTGATCGTTGCGAG 61.555 66.667 0.00 0.00 39.91 5.03
519 520 3.554692 GCGGTGATCGTTGCGAGG 61.555 66.667 0.00 0.00 39.91 4.63
520 521 3.554692 CGGTGATCGTTGCGAGGC 61.555 66.667 0.00 0.00 39.91 4.70
521 522 2.125512 GGTGATCGTTGCGAGGCT 60.126 61.111 0.00 0.00 39.91 4.58
522 523 2.167861 GGTGATCGTTGCGAGGCTC 61.168 63.158 3.87 3.87 39.91 4.70
523 524 2.167861 GTGATCGTTGCGAGGCTCC 61.168 63.158 9.32 2.37 39.91 4.70
524 525 2.586357 GATCGTTGCGAGGCTCCC 60.586 66.667 9.32 0.00 39.91 4.30
525 526 4.514577 ATCGTTGCGAGGCTCCCG 62.515 66.667 9.32 6.56 39.91 5.14
527 528 4.735132 CGTTGCGAGGCTCCCGAA 62.735 66.667 9.32 0.00 0.00 4.30
528 529 2.125106 GTTGCGAGGCTCCCGAAT 60.125 61.111 9.32 0.00 0.00 3.34
529 530 2.125147 TTGCGAGGCTCCCGAATG 60.125 61.111 9.32 0.00 0.00 2.67
530 531 2.655073 TTGCGAGGCTCCCGAATGA 61.655 57.895 9.32 0.00 0.00 2.57
531 532 2.279784 GCGAGGCTCCCGAATGAG 60.280 66.667 9.32 0.00 35.40 2.90
537 538 4.208632 CTCCCGAATGAGCGCTTT 57.791 55.556 13.26 1.49 0.00 3.51
538 539 2.471255 CTCCCGAATGAGCGCTTTT 58.529 52.632 13.26 9.06 0.00 2.27
539 540 0.804989 CTCCCGAATGAGCGCTTTTT 59.195 50.000 13.26 8.63 0.00 1.94
540 541 2.006888 CTCCCGAATGAGCGCTTTTTA 58.993 47.619 13.26 0.00 0.00 1.52
541 542 2.418628 CTCCCGAATGAGCGCTTTTTAA 59.581 45.455 13.26 0.00 0.00 1.52
542 543 3.013921 TCCCGAATGAGCGCTTTTTAAT 58.986 40.909 13.26 0.00 0.00 1.40
543 544 3.442273 TCCCGAATGAGCGCTTTTTAATT 59.558 39.130 13.26 7.14 0.00 1.40
544 545 4.636648 TCCCGAATGAGCGCTTTTTAATTA 59.363 37.500 13.26 0.00 0.00 1.40
545 546 4.970003 CCCGAATGAGCGCTTTTTAATTAG 59.030 41.667 13.26 7.48 0.00 1.73
546 547 4.437820 CCGAATGAGCGCTTTTTAATTAGC 59.562 41.667 13.26 0.00 0.00 3.09
552 553 1.835121 GCTTTTTAATTAGCGCCCGG 58.165 50.000 2.29 0.00 0.00 5.73
553 554 1.133598 GCTTTTTAATTAGCGCCCGGT 59.866 47.619 2.29 0.00 0.00 5.28
554 555 2.416296 GCTTTTTAATTAGCGCCCGGTT 60.416 45.455 2.29 0.00 0.00 4.44
555 556 3.431856 CTTTTTAATTAGCGCCCGGTTC 58.568 45.455 2.29 0.00 0.00 3.62
556 557 1.381522 TTTAATTAGCGCCCGGTTCC 58.618 50.000 2.29 0.00 0.00 3.62
557 558 0.252479 TTAATTAGCGCCCGGTTCCA 59.748 50.000 2.29 0.00 0.00 3.53
558 559 0.252479 TAATTAGCGCCCGGTTCCAA 59.748 50.000 2.29 0.00 0.00 3.53
559 560 1.310216 AATTAGCGCCCGGTTCCAAC 61.310 55.000 2.29 0.00 0.00 3.77
560 561 2.472414 ATTAGCGCCCGGTTCCAACA 62.472 55.000 2.29 0.00 0.00 3.33
561 562 2.677765 TTAGCGCCCGGTTCCAACAA 62.678 55.000 2.29 0.00 0.00 2.83
562 563 2.677765 TAGCGCCCGGTTCCAACAAA 62.678 55.000 2.29 0.00 0.00 2.83
563 564 3.121019 CGCCCGGTTCCAACAAAA 58.879 55.556 0.00 0.00 0.00 2.44
564 565 1.437986 CGCCCGGTTCCAACAAAAA 59.562 52.632 0.00 0.00 0.00 1.94
613 614 2.027325 AAAAACCCGCAGTCGTTCC 58.973 52.632 0.00 0.00 0.00 3.62
728 729 2.669113 CGACGACCCTGTAAACGAATCA 60.669 50.000 0.00 0.00 0.00 2.57
839 840 1.470632 GCCAGCAGCAGACAGTAGTAG 60.471 57.143 0.00 0.00 42.97 2.57
843 844 3.942115 CAGCAGCAGACAGTAGTAGTAGA 59.058 47.826 0.00 0.00 0.00 2.59
844 845 3.942748 AGCAGCAGACAGTAGTAGTAGAC 59.057 47.826 0.00 0.00 0.00 2.59
850 854 4.033709 AGACAGTAGTAGTAGACCCCGTA 58.966 47.826 0.00 0.00 0.00 4.02
893 899 1.448119 GGAAATGGCTAGAAGGCGCC 61.448 60.000 21.89 21.89 44.78 6.53
900 906 1.144936 CTAGAAGGCGCCCAGGAAG 59.855 63.158 26.15 11.04 0.00 3.46
907 913 2.550101 GCGCCCAGGAAGCATCATC 61.550 63.158 0.00 0.00 0.00 2.92
917 1262 2.126467 GAAGCATCATCGCAGAGAGAC 58.874 52.381 0.00 0.00 43.63 3.36
1149 1523 9.330063 TCTGCAACGAATTATCTCTGAATTAAT 57.670 29.630 0.00 0.00 0.00 1.40
1165 1587 6.539324 TGAATTAATTTGCGTTAGTTCCTCG 58.461 36.000 1.43 0.00 32.47 4.63
1171 1593 1.674441 TGCGTTAGTTCCTCGATCGAT 59.326 47.619 19.78 5.78 0.00 3.59
1209 1631 5.104193 AGACTAGTACTATCCCTCCGTTTCA 60.104 44.000 2.33 0.00 0.00 2.69
1218 1640 3.414269 TCCCTCCGTTTCAAAATACACC 58.586 45.455 0.00 0.00 0.00 4.16
1230 1652 1.767759 AATACACCTGCCATGGCTTC 58.232 50.000 35.53 9.68 42.51 3.86
1238 1682 1.614903 CTGCCATGGCTTCAGTTCAAA 59.385 47.619 35.53 11.92 42.51 2.69
1240 1684 2.633967 TGCCATGGCTTCAGTTCAAATT 59.366 40.909 35.53 0.00 42.51 1.82
1242 1686 3.434299 GCCATGGCTTCAGTTCAAATTTG 59.566 43.478 29.98 12.15 38.26 2.32
1243 1687 4.800249 GCCATGGCTTCAGTTCAAATTTGA 60.800 41.667 29.98 16.91 38.26 2.69
1244 1688 5.299148 CCATGGCTTCAGTTCAAATTTGAA 58.701 37.500 26.01 26.01 44.31 2.69
1513 2012 7.926018 GTGTTTGGGTACTTTGAATTTCTCATT 59.074 33.333 0.00 0.00 32.78 2.57
1558 2057 5.706916 TGTAGTCTTACAAAACTAGGAGCG 58.293 41.667 0.00 0.00 36.86 5.03
1576 2075 1.396996 GCGACGCATTTTCTACCACAT 59.603 47.619 16.42 0.00 0.00 3.21
1599 2101 9.167311 ACATGAAAGCTTGTATTTTCTACTAGG 57.833 33.333 0.00 0.00 35.02 3.02
1850 2352 4.373116 TGAGCCCCGCGACTGAAC 62.373 66.667 8.23 0.00 0.00 3.18
1975 2478 0.849417 AGATGGGGCTGGGAAGAATC 59.151 55.000 0.00 0.00 0.00 2.52
2064 2567 2.818169 AAAGGCGGCAGACTGTGGA 61.818 57.895 13.08 0.00 34.63 4.02
2133 2636 3.489355 CTTGTGGCATGGAATAGGCATA 58.511 45.455 0.00 0.00 42.48 3.14
2134 2637 3.812611 TGTGGCATGGAATAGGCATAT 57.187 42.857 0.00 0.00 42.48 1.78
2136 2639 4.588899 TGTGGCATGGAATAGGCATATAC 58.411 43.478 0.00 0.00 42.48 1.47
2138 2641 5.487131 TGTGGCATGGAATAGGCATATACTA 59.513 40.000 0.00 0.00 42.48 1.82
2140 2643 7.346960 TGTGGCATGGAATAGGCATATACTATA 59.653 37.037 0.00 0.00 42.48 1.31
2142 2645 7.346960 TGGCATGGAATAGGCATATACTATACA 59.653 37.037 0.00 4.13 37.96 2.29
2143 2646 8.378565 GGCATGGAATAGGCATATACTATACAT 58.621 37.037 0.00 5.70 37.96 2.29
2166 2669 9.205513 ACATTTAAAATCAGAATTAGGGCTCAT 57.794 29.630 0.00 0.00 0.00 2.90
2167 2670 9.688592 CATTTAAAATCAGAATTAGGGCTCATC 57.311 33.333 0.00 0.00 0.00 2.92
2168 2671 9.652114 ATTTAAAATCAGAATTAGGGCTCATCT 57.348 29.630 0.00 0.00 0.00 2.90
2169 2672 8.682936 TTAAAATCAGAATTAGGGCTCATCTC 57.317 34.615 0.00 0.00 0.00 2.75
2171 2674 6.451292 AATCAGAATTAGGGCTCATCTCAT 57.549 37.500 0.00 0.00 0.00 2.90
2173 2676 7.565190 ATCAGAATTAGGGCTCATCTCATTA 57.435 36.000 0.00 0.00 0.00 1.90
2174 2677 7.565190 TCAGAATTAGGGCTCATCTCATTAT 57.435 36.000 0.00 0.00 0.00 1.28
2175 2678 8.670521 TCAGAATTAGGGCTCATCTCATTATA 57.329 34.615 0.00 0.00 0.00 0.98
2178 2681 7.682028 AGAATTAGGGCTCATCTCATTATACCT 59.318 37.037 0.00 0.00 0.00 3.08
2179 2682 6.611613 TTAGGGCTCATCTCATTATACCTG 57.388 41.667 0.00 0.00 0.00 4.00
2183 2686 6.274200 AGGGCTCATCTCATTATACCTGAATT 59.726 38.462 0.00 0.00 0.00 2.17
2184 2687 6.944862 GGGCTCATCTCATTATACCTGAATTT 59.055 38.462 0.00 0.00 0.00 1.82
2185 2688 7.094463 GGGCTCATCTCATTATACCTGAATTTG 60.094 40.741 0.00 0.00 0.00 2.32
2186 2689 7.663081 GGCTCATCTCATTATACCTGAATTTGA 59.337 37.037 0.00 0.00 0.00 2.69
2187 2690 9.228949 GCTCATCTCATTATACCTGAATTTGAT 57.771 33.333 0.00 0.00 0.00 2.57
2189 2692 9.006839 TCATCTCATTATACCTGAATTTGATGC 57.993 33.333 0.00 0.00 30.89 3.91
2190 2693 7.425577 TCTCATTATACCTGAATTTGATGCG 57.574 36.000 0.00 0.00 0.00 4.73
2191 2694 7.216494 TCTCATTATACCTGAATTTGATGCGA 58.784 34.615 0.00 0.00 0.00 5.10
2192 2695 7.386025 TCTCATTATACCTGAATTTGATGCGAG 59.614 37.037 0.00 0.00 0.00 5.03
2193 2696 6.427853 TCATTATACCTGAATTTGATGCGAGG 59.572 38.462 0.00 0.00 0.00 4.63
2194 2697 1.098050 ACCTGAATTTGATGCGAGGC 58.902 50.000 0.00 0.00 0.00 4.70
2195 2698 1.097232 CCTGAATTTGATGCGAGGCA 58.903 50.000 0.00 0.00 44.86 4.75
2196 2699 1.473677 CCTGAATTTGATGCGAGGCAA 59.526 47.619 0.00 0.00 43.62 4.52
2197 2700 2.523015 CTGAATTTGATGCGAGGCAAC 58.477 47.619 0.00 0.00 43.62 4.17
2198 2701 1.885233 TGAATTTGATGCGAGGCAACA 59.115 42.857 0.00 0.00 43.62 3.33
2199 2702 2.095110 TGAATTTGATGCGAGGCAACAG 60.095 45.455 0.99 0.00 41.88 3.16
2200 2703 1.538047 ATTTGATGCGAGGCAACAGT 58.462 45.000 0.99 0.00 41.88 3.55
2201 2704 1.317613 TTTGATGCGAGGCAACAGTT 58.682 45.000 0.99 0.00 41.88 3.16
2202 2705 1.317613 TTGATGCGAGGCAACAGTTT 58.682 45.000 0.99 0.00 41.88 2.66
2203 2706 0.592637 TGATGCGAGGCAACAGTTTG 59.407 50.000 0.00 0.00 43.62 2.93
2204 2707 0.593128 GATGCGAGGCAACAGTTTGT 59.407 50.000 0.00 0.00 43.62 2.83
2205 2708 1.804151 GATGCGAGGCAACAGTTTGTA 59.196 47.619 0.00 0.00 43.62 2.41
2206 2709 1.669604 TGCGAGGCAACAGTTTGTAA 58.330 45.000 0.00 0.00 34.76 2.41
2207 2710 1.332375 TGCGAGGCAACAGTTTGTAAC 59.668 47.619 0.00 0.00 34.76 2.50
2208 2711 1.602377 GCGAGGCAACAGTTTGTAACT 59.398 47.619 0.00 0.00 44.06 2.24
2209 2712 2.803956 GCGAGGCAACAGTTTGTAACTA 59.196 45.455 0.00 0.00 40.46 2.24
2210 2713 3.249080 GCGAGGCAACAGTTTGTAACTAA 59.751 43.478 0.00 0.00 40.46 2.24
2211 2714 4.260866 GCGAGGCAACAGTTTGTAACTAAA 60.261 41.667 0.00 0.00 40.46 1.85
2212 2715 5.562113 GCGAGGCAACAGTTTGTAACTAAAT 60.562 40.000 0.00 0.00 40.46 1.40
2213 2716 6.347888 GCGAGGCAACAGTTTGTAACTAAATA 60.348 38.462 0.00 0.00 40.46 1.40
2214 2717 7.234384 CGAGGCAACAGTTTGTAACTAAATAG 58.766 38.462 0.00 0.00 40.46 1.73
2215 2718 7.117236 CGAGGCAACAGTTTGTAACTAAATAGA 59.883 37.037 0.00 0.00 40.46 1.98
2216 2719 8.685838 AGGCAACAGTTTGTAACTAAATAGAA 57.314 30.769 0.00 0.00 40.46 2.10
2217 2720 9.297037 AGGCAACAGTTTGTAACTAAATAGAAT 57.703 29.630 0.00 0.00 40.46 2.40
2223 2726 9.922305 CAGTTTGTAACTAAATAGAATAGCAGC 57.078 33.333 0.00 0.00 40.46 5.25
2229 2732 9.535878 GTAACTAAATAGAATAGCAGCTCTGTT 57.464 33.333 0.00 0.00 0.00 3.16
2232 2735 9.103861 ACTAAATAGAATAGCAGCTCTGTTTTC 57.896 33.333 0.00 0.00 35.44 2.29
2233 2736 6.934048 AATAGAATAGCAGCTCTGTTTTCC 57.066 37.500 0.00 0.00 0.00 3.13
2247 2750 4.463186 TCTGTTTTCCCCGTTTTCTCAAAA 59.537 37.500 0.00 0.00 0.00 2.44
2253 2756 5.699097 TCCCCGTTTTCTCAAAATAACAG 57.301 39.130 0.00 0.00 32.22 3.16
2258 2761 7.169140 CCCCGTTTTCTCAAAATAACAGAAAAG 59.831 37.037 6.37 2.69 43.46 2.27
2260 2763 8.061125 CGTTTTCTCAAAATAACAGAAAAGGG 57.939 34.615 14.12 4.90 43.46 3.95
2275 2778 7.057894 ACAGAAAAGGGATAGTAAACACACAA 58.942 34.615 0.00 0.00 0.00 3.33
2280 2783 9.582648 AAAAGGGATAGTAAACACACAAATACT 57.417 29.630 0.00 0.00 33.45 2.12
2289 2799 1.066143 CACACAAATACTCCCTCCGCT 60.066 52.381 0.00 0.00 0.00 5.52
2292 2802 1.482593 ACAAATACTCCCTCCGCTCAG 59.517 52.381 0.00 0.00 0.00 3.35
2304 2817 5.185249 TCCCTCCGCTCAGTATTATATGTTC 59.815 44.000 0.00 0.00 0.00 3.18
2337 2850 6.396829 TCTGAATCAGATGTATGTCGACAT 57.603 37.500 31.93 31.93 42.82 3.06
2342 2855 6.834959 ATCAGATGTATGTCGACATGTTTC 57.165 37.500 35.46 26.67 40.18 2.78
2358 2871 5.048083 ACATGTTTCAGTGTGTTTGTTCACT 60.048 36.000 0.00 0.00 44.32 3.41
2451 2965 2.396590 CCATACGGGTAAAGTGCTGT 57.603 50.000 0.00 0.00 0.00 4.40
2511 3025 4.389890 TTTGTGCAGTTTCAAATCAGCT 57.610 36.364 0.00 0.00 0.00 4.24
2525 3039 7.020827 TCAAATCAGCTTCCTATAATAGGGG 57.979 40.000 0.00 0.00 46.24 4.79
2597 3112 9.674068 GTCCCTAAAGATAGACAAAAATTCTCT 57.326 33.333 0.00 0.00 0.00 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.468914 GGGCGTGCCTCTTTTAGAAAG 59.531 52.381 11.25 0.00 36.10 2.62
1 2 1.202830 TGGGCGTGCCTCTTTTAGAAA 60.203 47.619 11.25 0.00 36.10 2.52
2 3 0.398696 TGGGCGTGCCTCTTTTAGAA 59.601 50.000 11.25 0.00 36.10 2.10
3 4 0.618458 ATGGGCGTGCCTCTTTTAGA 59.382 50.000 11.25 0.00 36.10 2.10
4 5 0.734889 CATGGGCGTGCCTCTTTTAG 59.265 55.000 11.25 0.00 36.10 1.85
5 6 1.312371 GCATGGGCGTGCCTCTTTTA 61.312 55.000 11.25 0.00 39.18 1.52
6 7 2.639327 GCATGGGCGTGCCTCTTTT 61.639 57.895 11.25 0.00 39.18 2.27
7 8 3.064324 GCATGGGCGTGCCTCTTT 61.064 61.111 11.25 0.00 39.18 2.52
13 14 4.783621 TCAGAGGCATGGGCGTGC 62.784 66.667 5.07 5.07 44.31 5.34
14 15 2.184830 CATCAGAGGCATGGGCGTG 61.185 63.158 0.00 0.00 42.47 5.34
15 16 2.191375 CATCAGAGGCATGGGCGT 59.809 61.111 0.00 0.00 42.47 5.68
16 17 2.593725 CCATCAGAGGCATGGGCG 60.594 66.667 0.00 0.00 42.47 6.13
17 18 0.178970 ATTCCATCAGAGGCATGGGC 60.179 55.000 0.00 0.00 41.25 5.36
18 19 1.144298 TGATTCCATCAGAGGCATGGG 59.856 52.381 0.00 0.00 41.25 4.00
19 20 2.651382 TGATTCCATCAGAGGCATGG 57.349 50.000 0.00 0.00 42.16 3.66
20 21 4.458295 GGTTATGATTCCATCAGAGGCATG 59.542 45.833 0.00 0.00 43.53 4.06
21 22 4.660168 GGTTATGATTCCATCAGAGGCAT 58.340 43.478 0.00 0.00 43.53 4.40
22 23 3.494924 CGGTTATGATTCCATCAGAGGCA 60.495 47.826 0.00 0.00 43.53 4.75
23 24 3.070018 CGGTTATGATTCCATCAGAGGC 58.930 50.000 0.00 0.00 43.53 4.70
24 25 4.060900 CACGGTTATGATTCCATCAGAGG 58.939 47.826 0.00 0.00 43.53 3.69
25 26 3.496130 GCACGGTTATGATTCCATCAGAG 59.504 47.826 0.00 0.00 43.53 3.35
26 27 3.466836 GCACGGTTATGATTCCATCAGA 58.533 45.455 0.00 0.00 43.53 3.27
27 28 2.549754 GGCACGGTTATGATTCCATCAG 59.450 50.000 0.00 0.00 43.53 2.90
28 29 2.172505 AGGCACGGTTATGATTCCATCA 59.827 45.455 0.00 0.00 44.55 3.07
29 30 2.808543 GAGGCACGGTTATGATTCCATC 59.191 50.000 0.00 0.00 34.31 3.51
30 31 2.439507 AGAGGCACGGTTATGATTCCAT 59.560 45.455 0.00 0.00 36.81 3.41
31 32 1.837439 AGAGGCACGGTTATGATTCCA 59.163 47.619 0.00 0.00 0.00 3.53
32 33 2.484889 GAGAGGCACGGTTATGATTCC 58.515 52.381 0.00 0.00 0.00 3.01
33 34 2.128035 CGAGAGGCACGGTTATGATTC 58.872 52.381 0.00 0.00 0.00 2.52
34 35 1.480954 ACGAGAGGCACGGTTATGATT 59.519 47.619 0.00 0.00 34.93 2.57
35 36 1.112113 ACGAGAGGCACGGTTATGAT 58.888 50.000 0.00 0.00 34.93 2.45
36 37 0.172578 CACGAGAGGCACGGTTATGA 59.827 55.000 0.00 0.00 34.93 2.15
37 38 0.172578 TCACGAGAGGCACGGTTATG 59.827 55.000 0.00 0.00 34.93 1.90
38 39 0.892755 TTCACGAGAGGCACGGTTAT 59.107 50.000 0.00 0.00 34.93 1.89
39 40 0.675083 TTTCACGAGAGGCACGGTTA 59.325 50.000 0.00 0.00 34.93 2.85
40 41 0.179067 TTTTCACGAGAGGCACGGTT 60.179 50.000 0.00 0.00 34.93 4.44
41 42 0.179067 TTTTTCACGAGAGGCACGGT 60.179 50.000 0.00 0.00 34.93 4.83
42 43 2.612200 TTTTTCACGAGAGGCACGG 58.388 52.632 0.00 0.00 34.93 4.94
58 59 8.402798 ACAAAAAGAATGGGTTTTCTGTTTTT 57.597 26.923 0.68 0.00 39.17 1.94
59 60 7.994425 ACAAAAAGAATGGGTTTTCTGTTTT 57.006 28.000 0.68 2.33 39.17 2.43
60 61 7.994425 AACAAAAAGAATGGGTTTTCTGTTT 57.006 28.000 0.00 0.00 41.65 2.83
61 62 7.994425 AAACAAAAAGAATGGGTTTTCTGTT 57.006 28.000 0.00 0.00 35.18 3.16
62 63 7.994425 AAAACAAAAAGAATGGGTTTTCTGT 57.006 28.000 0.00 0.00 37.13 3.41
65 66 6.457663 CCCGAAAACAAAAAGAATGGGTTTTC 60.458 38.462 14.82 14.82 46.79 2.29
66 67 5.355630 CCCGAAAACAAAAAGAATGGGTTTT 59.644 36.000 0.00 0.00 42.44 2.43
67 68 4.878971 CCCGAAAACAAAAAGAATGGGTTT 59.121 37.500 0.00 0.00 33.45 3.27
68 69 4.447290 CCCGAAAACAAAAAGAATGGGTT 58.553 39.130 0.00 0.00 0.00 4.11
69 70 3.181459 CCCCGAAAACAAAAAGAATGGGT 60.181 43.478 0.00 0.00 32.07 4.51
70 71 3.070302 TCCCCGAAAACAAAAAGAATGGG 59.930 43.478 0.00 0.00 0.00 4.00
71 72 4.306600 CTCCCCGAAAACAAAAAGAATGG 58.693 43.478 0.00 0.00 0.00 3.16
72 73 4.306600 CCTCCCCGAAAACAAAAAGAATG 58.693 43.478 0.00 0.00 0.00 2.67
73 74 3.244078 GCCTCCCCGAAAACAAAAAGAAT 60.244 43.478 0.00 0.00 0.00 2.40
74 75 2.101750 GCCTCCCCGAAAACAAAAAGAA 59.898 45.455 0.00 0.00 0.00 2.52
75 76 1.684450 GCCTCCCCGAAAACAAAAAGA 59.316 47.619 0.00 0.00 0.00 2.52
76 77 1.410882 TGCCTCCCCGAAAACAAAAAG 59.589 47.619 0.00 0.00 0.00 2.27
77 78 1.137282 GTGCCTCCCCGAAAACAAAAA 59.863 47.619 0.00 0.00 0.00 1.94
78 79 0.747852 GTGCCTCCCCGAAAACAAAA 59.252 50.000 0.00 0.00 0.00 2.44
79 80 1.448922 CGTGCCTCCCCGAAAACAAA 61.449 55.000 0.00 0.00 0.00 2.83
80 81 1.894756 CGTGCCTCCCCGAAAACAA 60.895 57.895 0.00 0.00 0.00 2.83
81 82 2.281208 CGTGCCTCCCCGAAAACA 60.281 61.111 0.00 0.00 0.00 2.83
82 83 2.031465 TCGTGCCTCCCCGAAAAC 59.969 61.111 0.00 0.00 0.00 2.43
83 84 2.031465 GTCGTGCCTCCCCGAAAA 59.969 61.111 0.00 0.00 34.47 2.29
84 85 4.011517 GGTCGTGCCTCCCCGAAA 62.012 66.667 0.00 0.00 34.47 3.46
87 88 4.838152 CATGGTCGTGCCTCCCCG 62.838 72.222 0.00 0.00 38.35 5.73
88 89 3.399181 TCATGGTCGTGCCTCCCC 61.399 66.667 0.00 0.00 38.35 4.81
89 90 2.125106 GTCATGGTCGTGCCTCCC 60.125 66.667 0.00 0.00 38.35 4.30
90 91 1.153549 GAGTCATGGTCGTGCCTCC 60.154 63.158 0.00 0.00 38.35 4.30
91 92 0.179124 GAGAGTCATGGTCGTGCCTC 60.179 60.000 0.00 0.00 38.35 4.70
92 93 0.900182 TGAGAGTCATGGTCGTGCCT 60.900 55.000 0.00 0.00 38.35 4.75
93 94 0.737715 GTGAGAGTCATGGTCGTGCC 60.738 60.000 0.00 0.00 37.90 5.01
94 95 0.038251 TGTGAGAGTCATGGTCGTGC 60.038 55.000 0.00 0.00 0.00 5.34
95 96 2.438868 TTGTGAGAGTCATGGTCGTG 57.561 50.000 0.00 0.00 0.00 4.35
96 97 3.393800 CTTTTGTGAGAGTCATGGTCGT 58.606 45.455 0.00 0.00 0.00 4.34
97 98 2.158449 GCTTTTGTGAGAGTCATGGTCG 59.842 50.000 0.00 0.00 0.00 4.79
98 99 3.058639 GTGCTTTTGTGAGAGTCATGGTC 60.059 47.826 0.00 0.00 0.00 4.02
99 100 2.880890 GTGCTTTTGTGAGAGTCATGGT 59.119 45.455 0.00 0.00 0.00 3.55
100 101 2.880268 TGTGCTTTTGTGAGAGTCATGG 59.120 45.455 0.00 0.00 0.00 3.66
101 102 4.285292 GTTGTGCTTTTGTGAGAGTCATG 58.715 43.478 0.00 0.00 0.00 3.07
102 103 3.316308 GGTTGTGCTTTTGTGAGAGTCAT 59.684 43.478 0.00 0.00 0.00 3.06
103 104 2.682856 GGTTGTGCTTTTGTGAGAGTCA 59.317 45.455 0.00 0.00 0.00 3.41
104 105 2.286418 CGGTTGTGCTTTTGTGAGAGTC 60.286 50.000 0.00 0.00 0.00 3.36
105 106 1.670811 CGGTTGTGCTTTTGTGAGAGT 59.329 47.619 0.00 0.00 0.00 3.24
106 107 1.670811 ACGGTTGTGCTTTTGTGAGAG 59.329 47.619 0.00 0.00 0.00 3.20
107 108 1.400142 CACGGTTGTGCTTTTGTGAGA 59.600 47.619 0.00 0.00 39.67 3.27
108 109 1.400142 TCACGGTTGTGCTTTTGTGAG 59.600 47.619 0.00 0.00 46.01 3.51
109 110 1.131504 GTCACGGTTGTGCTTTTGTGA 59.868 47.619 0.00 0.00 46.01 3.58
110 111 1.132262 AGTCACGGTTGTGCTTTTGTG 59.868 47.619 0.00 0.00 46.01 3.33
111 112 1.400494 GAGTCACGGTTGTGCTTTTGT 59.600 47.619 0.00 0.00 46.01 2.83
112 113 1.670811 AGAGTCACGGTTGTGCTTTTG 59.329 47.619 0.00 0.00 46.01 2.44
113 114 1.940613 GAGAGTCACGGTTGTGCTTTT 59.059 47.619 0.00 0.00 46.01 2.27
114 115 1.583054 GAGAGTCACGGTTGTGCTTT 58.417 50.000 0.00 0.00 46.01 3.51
115 116 0.597637 CGAGAGTCACGGTTGTGCTT 60.598 55.000 1.62 0.00 46.01 3.91
116 117 1.007271 CGAGAGTCACGGTTGTGCT 60.007 57.895 1.62 0.00 46.01 4.40
117 118 2.658707 GCGAGAGTCACGGTTGTGC 61.659 63.158 11.95 0.00 46.01 4.57
118 119 2.726850 TCGCGAGAGTCACGGTTGTG 62.727 60.000 3.71 0.00 40.81 3.33
119 120 2.050351 CGCGAGAGTCACGGTTGT 60.050 61.111 11.95 0.00 0.00 3.32
120 121 0.937699 TTTCGCGAGAGTCACGGTTG 60.938 55.000 9.59 0.00 43.69 3.77
121 122 0.663568 CTTTCGCGAGAGTCACGGTT 60.664 55.000 17.92 0.00 43.69 4.44
122 123 1.081376 CTTTCGCGAGAGTCACGGT 60.081 57.895 17.92 0.00 43.69 4.83
123 124 2.437343 GCTTTCGCGAGAGTCACGG 61.437 63.158 25.34 2.90 43.69 4.94
124 125 1.729484 TGCTTTCGCGAGAGTCACG 60.729 57.895 25.34 5.53 43.69 4.35
125 126 0.939577 TGTGCTTTCGCGAGAGTCAC 60.940 55.000 29.56 29.56 43.69 3.67
126 127 0.249280 TTGTGCTTTCGCGAGAGTCA 60.249 50.000 25.34 20.22 43.69 3.41
127 128 0.161870 GTTGTGCTTTCGCGAGAGTC 59.838 55.000 25.34 18.16 43.69 3.36
128 129 1.222115 GGTTGTGCTTTCGCGAGAGT 61.222 55.000 25.34 0.00 43.69 3.24
129 130 1.493311 GGTTGTGCTTTCGCGAGAG 59.507 57.895 21.42 21.42 43.69 3.20
130 131 2.307309 CGGTTGTGCTTTCGCGAGA 61.307 57.895 9.59 3.35 39.65 4.04
131 132 2.170985 CGGTTGTGCTTTCGCGAG 59.829 61.111 9.59 0.00 39.65 5.03
132 133 2.586635 ACGGTTGTGCTTTCGCGA 60.587 55.556 3.71 3.71 39.65 5.87
133 134 2.425124 CACGGTTGTGCTTTCGCG 60.425 61.111 0.00 0.00 39.67 5.87
151 152 0.375106 GATTTTGCTTCCGCGAGAGG 59.625 55.000 8.23 4.88 39.65 3.69
152 153 0.025513 CGATTTTGCTTCCGCGAGAG 59.974 55.000 8.23 5.93 39.65 3.20
153 154 0.669318 ACGATTTTGCTTCCGCGAGA 60.669 50.000 8.23 0.00 39.65 4.04
154 155 0.519175 CACGATTTTGCTTCCGCGAG 60.519 55.000 8.23 0.00 39.65 5.03
155 156 0.946700 TCACGATTTTGCTTCCGCGA 60.947 50.000 8.23 0.00 39.65 5.87
156 157 0.789383 GTCACGATTTTGCTTCCGCG 60.789 55.000 0.00 0.00 39.65 6.46
157 158 0.517316 AGTCACGATTTTGCTTCCGC 59.483 50.000 0.00 0.00 0.00 5.54
158 159 2.069273 AGAGTCACGATTTTGCTTCCG 58.931 47.619 0.00 0.00 0.00 4.30
159 160 2.092838 CGAGAGTCACGATTTTGCTTCC 59.907 50.000 3.68 0.00 0.00 3.46
160 161 2.473049 GCGAGAGTCACGATTTTGCTTC 60.473 50.000 14.42 0.00 0.00 3.86
161 162 1.461127 GCGAGAGTCACGATTTTGCTT 59.539 47.619 14.42 0.00 0.00 3.91
162 163 1.071605 GCGAGAGTCACGATTTTGCT 58.928 50.000 14.42 0.00 0.00 3.91
163 164 0.246912 CGCGAGAGTCACGATTTTGC 60.247 55.000 14.42 0.00 0.00 3.68
164 165 1.336877 TCGCGAGAGTCACGATTTTG 58.663 50.000 14.42 0.00 34.84 2.44
165 166 2.060326 TTCGCGAGAGTCACGATTTT 57.940 45.000 14.42 0.00 43.69 1.82
166 167 1.986378 CTTTCGCGAGAGTCACGATTT 59.014 47.619 17.92 0.00 43.69 2.17
167 168 1.618861 CTTTCGCGAGAGTCACGATT 58.381 50.000 17.92 0.00 43.69 3.34
168 169 0.179161 CCTTTCGCGAGAGTCACGAT 60.179 55.000 23.28 0.00 43.69 3.73
169 170 1.209383 CCTTTCGCGAGAGTCACGA 59.791 57.895 23.28 6.50 43.69 4.35
170 171 0.386858 TTCCTTTCGCGAGAGTCACG 60.387 55.000 23.28 9.67 43.69 4.35
171 172 1.779569 TTTCCTTTCGCGAGAGTCAC 58.220 50.000 23.28 0.00 43.69 3.67
172 173 2.519377 TTTTCCTTTCGCGAGAGTCA 57.481 45.000 23.28 8.47 43.69 3.41
207 208 2.761208 TGCCTCTTGAAAACGGGAAAAA 59.239 40.909 0.00 0.00 0.00 1.94
208 209 2.100087 GTGCCTCTTGAAAACGGGAAAA 59.900 45.455 0.00 0.00 0.00 2.29
209 210 1.679153 GTGCCTCTTGAAAACGGGAAA 59.321 47.619 0.00 0.00 0.00 3.13
210 211 1.314730 GTGCCTCTTGAAAACGGGAA 58.685 50.000 0.00 0.00 0.00 3.97
211 212 0.882927 CGTGCCTCTTGAAAACGGGA 60.883 55.000 0.00 0.00 0.00 5.14
212 213 1.574428 CGTGCCTCTTGAAAACGGG 59.426 57.895 0.00 0.00 0.00 5.28
213 214 1.574428 CCGTGCCTCTTGAAAACGG 59.426 57.895 0.00 0.00 46.69 4.44
214 215 1.082104 GCCGTGCCTCTTGAAAACG 60.082 57.895 0.00 0.00 0.00 3.60
215 216 1.285950 GGCCGTGCCTCTTGAAAAC 59.714 57.895 7.58 0.00 46.69 2.43
216 217 3.758172 GGCCGTGCCTCTTGAAAA 58.242 55.556 7.58 0.00 46.69 2.29
230 231 3.909258 TTTCGCGAGAGTCACGGCC 62.909 63.158 9.59 0.00 43.69 6.13
231 232 2.430244 TTTCGCGAGAGTCACGGC 60.430 61.111 9.59 3.61 43.69 5.68
232 233 2.437343 GCTTTCGCGAGAGTCACGG 61.437 63.158 25.34 2.90 43.69 4.94
233 234 1.729484 TGCTTTCGCGAGAGTCACG 60.729 57.895 25.34 5.53 43.69 4.35
234 235 0.939577 TGTGCTTTCGCGAGAGTCAC 60.940 55.000 29.56 29.56 43.69 3.67
235 236 0.249280 TTGTGCTTTCGCGAGAGTCA 60.249 50.000 25.34 20.22 43.69 3.41
236 237 1.059835 GATTGTGCTTTCGCGAGAGTC 59.940 52.381 25.34 18.16 43.69 3.36
237 238 1.071605 GATTGTGCTTTCGCGAGAGT 58.928 50.000 25.34 7.43 43.69 3.24
238 239 0.024238 CGATTGTGCTTTCGCGAGAG 59.976 55.000 21.42 21.42 43.69 3.20
239 240 0.666274 ACGATTGTGCTTTCGCGAGA 60.666 50.000 9.59 3.35 38.91 4.04
240 241 0.517132 CACGATTGTGCTTTCGCGAG 60.517 55.000 9.59 0.00 39.67 5.03
241 242 1.491127 CACGATTGTGCTTTCGCGA 59.509 52.632 3.71 3.71 39.67 5.87
242 243 4.026156 CACGATTGTGCTTTCGCG 57.974 55.556 0.00 0.00 39.67 5.87
251 252 2.741122 TTCGCGAAAAACACGATTGT 57.259 40.000 21.14 0.00 37.67 2.71
252 253 2.160285 GCTTTCGCGAAAAACACGATTG 60.160 45.455 31.68 18.83 35.48 2.67
253 254 2.041244 GCTTTCGCGAAAAACACGATT 58.959 42.857 31.68 0.00 35.48 3.34
254 255 1.003331 TGCTTTCGCGAAAAACACGAT 60.003 42.857 31.68 0.00 39.65 3.73
255 256 0.374063 TGCTTTCGCGAAAAACACGA 59.626 45.000 31.68 11.10 39.65 4.35
256 257 1.184349 TTGCTTTCGCGAAAAACACG 58.816 45.000 31.68 21.46 39.65 4.49
257 258 3.626389 TTTTGCTTTCGCGAAAAACAC 57.374 38.095 31.68 21.59 44.42 3.32
262 263 2.181205 CACAGTTTTGCTTTCGCGAAA 58.819 42.857 30.47 30.47 45.01 3.46
263 264 1.821336 CACAGTTTTGCTTTCGCGAA 58.179 45.000 19.38 19.38 39.65 4.70
264 265 0.591236 GCACAGTTTTGCTTTCGCGA 60.591 50.000 3.71 3.71 39.59 5.87
265 266 1.539776 GGCACAGTTTTGCTTTCGCG 61.540 55.000 0.00 0.00 42.56 5.87
266 267 0.249031 AGGCACAGTTTTGCTTTCGC 60.249 50.000 0.00 0.00 42.56 4.70
267 268 1.334869 AGAGGCACAGTTTTGCTTTCG 59.665 47.619 0.00 0.00 42.56 3.46
268 269 2.603173 CGAGAGGCACAGTTTTGCTTTC 60.603 50.000 0.00 0.00 42.56 2.62
269 270 1.334869 CGAGAGGCACAGTTTTGCTTT 59.665 47.619 0.00 0.00 42.56 3.51
270 271 0.947244 CGAGAGGCACAGTTTTGCTT 59.053 50.000 0.00 0.00 42.56 3.91
271 272 1.510480 GCGAGAGGCACAGTTTTGCT 61.510 55.000 0.00 0.00 42.56 3.91
272 273 1.081840 GCGAGAGGCACAGTTTTGC 60.082 57.895 0.00 0.00 42.87 3.68
273 274 1.205064 CGCGAGAGGCACAGTTTTG 59.795 57.895 0.00 0.00 43.84 2.44
274 275 1.961277 CCGCGAGAGGCACAGTTTT 60.961 57.895 8.23 0.00 43.84 2.43
275 276 2.357517 CCGCGAGAGGCACAGTTT 60.358 61.111 8.23 0.00 43.84 2.66
276 277 2.771763 CTTCCGCGAGAGGCACAGTT 62.772 60.000 8.23 0.00 43.84 3.16
277 278 3.288308 CTTCCGCGAGAGGCACAGT 62.288 63.158 8.23 0.00 43.84 3.55
278 279 2.507992 CTTCCGCGAGAGGCACAG 60.508 66.667 8.23 0.00 43.84 3.66
279 280 4.742201 GCTTCCGCGAGAGGCACA 62.742 66.667 20.89 0.00 46.54 4.57
283 284 2.391389 GGTTTGCTTCCGCGAGAGG 61.391 63.158 8.23 4.88 39.65 3.69
284 285 2.730672 CGGTTTGCTTCCGCGAGAG 61.731 63.158 8.23 5.93 41.48 3.20
285 286 2.736995 CGGTTTGCTTCCGCGAGA 60.737 61.111 8.23 0.00 41.48 4.04
290 291 2.070654 AAAGCCACGGTTTGCTTCCG 62.071 55.000 13.29 11.78 46.58 4.30
291 292 0.318699 GAAAGCCACGGTTTGCTTCC 60.319 55.000 13.29 0.00 46.58 3.46
292 293 0.660300 CGAAAGCCACGGTTTGCTTC 60.660 55.000 13.29 7.77 46.58 3.86
294 295 3.030652 CGAAAGCCACGGTTTGCT 58.969 55.556 0.00 0.00 40.17 3.91
343 344 7.252708 GGTCTTTCCTAACTTTTCGACAAAAA 58.747 34.615 0.00 0.00 35.56 1.94
344 345 6.457257 CGGTCTTTCCTAACTTTTCGACAAAA 60.457 38.462 0.00 0.00 0.00 2.44
345 346 5.006941 CGGTCTTTCCTAACTTTTCGACAAA 59.993 40.000 0.00 0.00 0.00 2.83
346 347 4.508861 CGGTCTTTCCTAACTTTTCGACAA 59.491 41.667 0.00 0.00 0.00 3.18
347 348 4.053295 CGGTCTTTCCTAACTTTTCGACA 58.947 43.478 0.00 0.00 0.00 4.35
348 349 3.431233 CCGGTCTTTCCTAACTTTTCGAC 59.569 47.826 0.00 0.00 0.00 4.20
349 350 3.070015 ACCGGTCTTTCCTAACTTTTCGA 59.930 43.478 0.00 0.00 0.00 3.71
350 351 3.185797 CACCGGTCTTTCCTAACTTTTCG 59.814 47.826 2.59 0.00 0.00 3.46
351 352 4.383173 TCACCGGTCTTTCCTAACTTTTC 58.617 43.478 2.59 0.00 0.00 2.29
352 353 4.426736 TCACCGGTCTTTCCTAACTTTT 57.573 40.909 2.59 0.00 0.00 2.27
353 354 4.426736 TTCACCGGTCTTTCCTAACTTT 57.573 40.909 2.59 0.00 0.00 2.66
354 355 4.426736 TTTCACCGGTCTTTCCTAACTT 57.573 40.909 2.59 0.00 0.00 2.66
355 356 4.426736 TTTTCACCGGTCTTTCCTAACT 57.573 40.909 2.59 0.00 0.00 2.24
356 357 4.261322 GGTTTTTCACCGGTCTTTCCTAAC 60.261 45.833 2.59 3.03 35.12 2.34
357 358 3.884693 GGTTTTTCACCGGTCTTTCCTAA 59.115 43.478 2.59 0.00 35.12 2.69
358 359 3.479489 GGTTTTTCACCGGTCTTTCCTA 58.521 45.455 2.59 0.00 35.12 2.94
359 360 2.304092 GGTTTTTCACCGGTCTTTCCT 58.696 47.619 2.59 0.00 35.12 3.36
360 361 2.787601 GGTTTTTCACCGGTCTTTCC 57.212 50.000 2.59 0.00 35.12 3.13
369 370 8.037293 GTCTTTTTGACGTTTTGGTTTTTCACC 61.037 37.037 0.00 0.00 40.00 4.02
370 371 6.788458 GTCTTTTTGACGTTTTGGTTTTTCAC 59.212 34.615 0.00 0.00 35.81 3.18
371 372 6.073711 GGTCTTTTTGACGTTTTGGTTTTTCA 60.074 34.615 0.00 0.00 46.24 2.69
372 373 6.301108 GGTCTTTTTGACGTTTTGGTTTTTC 58.699 36.000 0.00 0.00 46.24 2.29
373 374 5.179742 GGGTCTTTTTGACGTTTTGGTTTTT 59.820 36.000 0.00 0.00 46.24 1.94
374 375 4.691685 GGGTCTTTTTGACGTTTTGGTTTT 59.308 37.500 0.00 0.00 46.24 2.43
375 376 4.247258 GGGTCTTTTTGACGTTTTGGTTT 58.753 39.130 0.00 0.00 46.24 3.27
376 377 3.673866 CGGGTCTTTTTGACGTTTTGGTT 60.674 43.478 0.00 0.00 46.24 3.67
377 378 2.159352 CGGGTCTTTTTGACGTTTTGGT 60.159 45.455 0.00 0.00 46.24 3.67
378 379 2.456010 CGGGTCTTTTTGACGTTTTGG 58.544 47.619 0.00 0.00 46.24 3.28
379 380 2.456010 CCGGGTCTTTTTGACGTTTTG 58.544 47.619 0.00 0.00 46.24 2.44
380 381 1.202325 GCCGGGTCTTTTTGACGTTTT 60.202 47.619 2.18 0.00 46.24 2.43
381 382 0.382873 GCCGGGTCTTTTTGACGTTT 59.617 50.000 2.18 0.00 46.24 3.60
382 383 0.748729 TGCCGGGTCTTTTTGACGTT 60.749 50.000 2.18 0.00 46.24 3.99
383 384 0.748729 TTGCCGGGTCTTTTTGACGT 60.749 50.000 2.18 0.00 46.24 4.34
384 385 0.382515 TTTGCCGGGTCTTTTTGACG 59.617 50.000 2.18 0.00 46.24 4.35
385 386 2.588027 TTTTGCCGGGTCTTTTTGAC 57.412 45.000 2.18 0.00 44.63 3.18
386 387 2.418884 GGTTTTTGCCGGGTCTTTTTGA 60.419 45.455 2.18 0.00 0.00 2.69
387 388 1.937223 GGTTTTTGCCGGGTCTTTTTG 59.063 47.619 2.18 0.00 0.00 2.44
388 389 2.319136 GGTTTTTGCCGGGTCTTTTT 57.681 45.000 2.18 0.00 0.00 1.94
398 399 4.330347 TCTGCTTTTAAAACGGTTTTTGCC 59.670 37.500 22.44 8.95 35.62 4.52
399 400 5.457650 TCTGCTTTTAAAACGGTTTTTGC 57.542 34.783 22.44 19.55 35.62 3.68
400 401 8.141216 GTTTTCTGCTTTTAAAACGGTTTTTG 57.859 30.769 22.44 12.19 36.27 2.44
408 409 4.492579 CACGCGTTTTCTGCTTTTAAAAC 58.507 39.130 10.22 0.00 40.53 2.43
409 410 3.000575 GCACGCGTTTTCTGCTTTTAAAA 60.001 39.130 10.22 0.00 0.00 1.52
410 411 2.532317 GCACGCGTTTTCTGCTTTTAAA 59.468 40.909 10.22 0.00 0.00 1.52
411 412 2.113289 GCACGCGTTTTCTGCTTTTAA 58.887 42.857 10.22 0.00 0.00 1.52
412 413 1.749153 GCACGCGTTTTCTGCTTTTA 58.251 45.000 10.22 0.00 0.00 1.52
413 414 1.199852 CGCACGCGTTTTCTGCTTTT 61.200 50.000 10.22 0.00 34.35 2.27
414 415 1.654137 CGCACGCGTTTTCTGCTTT 60.654 52.632 10.22 0.00 34.35 3.51
415 416 2.042520 TTCGCACGCGTTTTCTGCTT 62.043 50.000 10.22 0.00 40.74 3.91
416 417 2.042520 TTTCGCACGCGTTTTCTGCT 62.043 50.000 10.22 0.00 40.74 4.24
417 418 1.197368 TTTTCGCACGCGTTTTCTGC 61.197 50.000 10.22 9.13 40.74 4.26
418 419 1.184349 TTTTTCGCACGCGTTTTCTG 58.816 45.000 10.22 0.00 40.74 3.02
419 420 3.607777 TTTTTCGCACGCGTTTTCT 57.392 42.105 10.22 0.00 40.74 2.52
442 443 2.820197 GCTCCCTCCGAATTCTGTTTTT 59.180 45.455 3.52 0.00 0.00 1.94
443 444 2.224769 TGCTCCCTCCGAATTCTGTTTT 60.225 45.455 3.52 0.00 0.00 2.43
444 445 1.351017 TGCTCCCTCCGAATTCTGTTT 59.649 47.619 3.52 0.00 0.00 2.83
445 446 0.984230 TGCTCCCTCCGAATTCTGTT 59.016 50.000 3.52 0.00 0.00 3.16
446 447 0.250513 GTGCTCCCTCCGAATTCTGT 59.749 55.000 3.52 0.00 0.00 3.41
447 448 0.462759 GGTGCTCCCTCCGAATTCTG 60.463 60.000 3.52 0.00 0.00 3.02
448 449 1.908483 GGTGCTCCCTCCGAATTCT 59.092 57.895 3.52 0.00 0.00 2.40
449 450 4.542075 GGTGCTCCCTCCGAATTC 57.458 61.111 0.00 0.00 0.00 2.17
459 460 3.986006 TCACGTGTCGGGTGCTCC 61.986 66.667 16.51 0.00 35.39 4.70
460 461 2.733593 GTCACGTGTCGGGTGCTC 60.734 66.667 16.51 0.00 35.39 4.26
461 462 4.640855 CGTCACGTGTCGGGTGCT 62.641 66.667 24.33 0.00 35.39 4.40
462 463 4.634133 TCGTCACGTGTCGGGTGC 62.634 66.667 29.42 7.10 35.39 5.01
463 464 1.372499 ATTCGTCACGTGTCGGGTG 60.372 57.895 29.42 7.14 36.74 4.61
464 465 1.372499 CATTCGTCACGTGTCGGGT 60.372 57.895 29.42 18.01 0.00 5.28
465 466 1.081041 TCATTCGTCACGTGTCGGG 60.081 57.895 29.42 20.45 0.00 5.14
466 467 0.386858 AGTCATTCGTCACGTGTCGG 60.387 55.000 29.42 16.84 0.00 4.79
467 468 0.702924 CAGTCATTCGTCACGTGTCG 59.297 55.000 25.70 25.70 0.00 4.35
468 469 1.979469 CTCAGTCATTCGTCACGTGTC 59.021 52.381 16.51 9.31 0.00 3.67
469 470 1.607148 TCTCAGTCATTCGTCACGTGT 59.393 47.619 16.51 0.00 0.00 4.49
470 471 2.245942 CTCTCAGTCATTCGTCACGTG 58.754 52.381 9.94 9.94 0.00 4.49
471 472 1.880675 ACTCTCAGTCATTCGTCACGT 59.119 47.619 0.00 0.00 0.00 4.49
472 473 2.245942 CACTCTCAGTCATTCGTCACG 58.754 52.381 0.00 0.00 0.00 4.35
473 474 2.983136 CACACTCTCAGTCATTCGTCAC 59.017 50.000 0.00 0.00 0.00 3.67
474 475 2.608016 GCACACTCTCAGTCATTCGTCA 60.608 50.000 0.00 0.00 0.00 4.35
475 476 1.989165 GCACACTCTCAGTCATTCGTC 59.011 52.381 0.00 0.00 0.00 4.20
476 477 1.337260 GGCACACTCTCAGTCATTCGT 60.337 52.381 0.00 0.00 0.00 3.85
477 478 1.337167 TGGCACACTCTCAGTCATTCG 60.337 52.381 0.00 0.00 0.00 3.34
478 479 2.462456 TGGCACACTCTCAGTCATTC 57.538 50.000 0.00 0.00 0.00 2.67
479 480 2.105477 ACTTGGCACACTCTCAGTCATT 59.895 45.455 0.00 0.00 39.29 2.57
480 481 1.696336 ACTTGGCACACTCTCAGTCAT 59.304 47.619 0.00 0.00 39.29 3.06
481 482 1.123077 ACTTGGCACACTCTCAGTCA 58.877 50.000 0.00 0.00 39.29 3.41
482 483 1.506493 CACTTGGCACACTCTCAGTC 58.494 55.000 0.00 0.00 39.29 3.51
483 484 0.107456 CCACTTGGCACACTCTCAGT 59.893 55.000 0.00 0.00 39.29 3.41
484 485 2.924185 CCACTTGGCACACTCTCAG 58.076 57.895 0.00 0.00 39.29 3.35
495 496 1.671054 AACGATCACCGCCACTTGG 60.671 57.895 0.00 0.00 43.32 3.61
496 497 1.497278 CAACGATCACCGCCACTTG 59.503 57.895 0.00 0.00 43.32 3.16
497 498 2.325082 GCAACGATCACCGCCACTT 61.325 57.895 0.00 0.00 43.32 3.16
498 499 2.742372 GCAACGATCACCGCCACT 60.742 61.111 0.00 0.00 43.32 4.00
499 500 4.147322 CGCAACGATCACCGCCAC 62.147 66.667 0.00 0.00 43.32 5.01
500 501 4.365505 TCGCAACGATCACCGCCA 62.366 61.111 0.00 0.00 43.32 5.69
501 502 3.554692 CTCGCAACGATCACCGCC 61.555 66.667 0.00 0.00 43.32 6.13
502 503 3.554692 CCTCGCAACGATCACCGC 61.555 66.667 0.00 0.00 43.32 5.68
503 504 3.554692 GCCTCGCAACGATCACCG 61.555 66.667 0.00 0.00 45.44 4.94
504 505 2.125512 AGCCTCGCAACGATCACC 60.126 61.111 0.00 0.00 34.61 4.02
505 506 2.167861 GGAGCCTCGCAACGATCAC 61.168 63.158 0.00 0.00 34.61 3.06
506 507 2.184322 GGAGCCTCGCAACGATCA 59.816 61.111 0.00 0.00 34.61 2.92
507 508 2.586357 GGGAGCCTCGCAACGATC 60.586 66.667 3.57 0.00 34.61 3.69
508 509 4.514577 CGGGAGCCTCGCAACGAT 62.515 66.667 9.61 0.00 34.61 3.73
510 511 4.735132 TTCGGGAGCCTCGCAACG 62.735 66.667 9.61 0.36 0.00 4.10
511 512 2.125106 ATTCGGGAGCCTCGCAAC 60.125 61.111 9.61 0.00 0.00 4.17
512 513 2.125147 CATTCGGGAGCCTCGCAA 60.125 61.111 9.61 3.26 0.00 4.85
513 514 3.074369 TCATTCGGGAGCCTCGCA 61.074 61.111 9.61 0.00 0.00 5.10
514 515 2.279784 CTCATTCGGGAGCCTCGC 60.280 66.667 0.00 0.00 0.00 5.03
520 521 0.804989 AAAAAGCGCTCATTCGGGAG 59.195 50.000 12.06 0.00 37.97 4.30
521 522 2.102070 TAAAAAGCGCTCATTCGGGA 57.898 45.000 12.06 0.00 0.00 5.14
522 523 2.911819 TTAAAAAGCGCTCATTCGGG 57.088 45.000 12.06 0.00 0.00 5.14
523 524 4.437820 GCTAATTAAAAAGCGCTCATTCGG 59.562 41.667 12.06 3.26 0.00 4.30
524 525 5.531416 GCTAATTAAAAAGCGCTCATTCG 57.469 39.130 12.06 2.22 0.00 3.34
533 534 1.133598 ACCGGGCGCTAATTAAAAAGC 59.866 47.619 7.64 3.01 35.33 3.51
534 535 3.431856 GAACCGGGCGCTAATTAAAAAG 58.568 45.455 7.64 0.00 0.00 2.27
535 536 2.164017 GGAACCGGGCGCTAATTAAAAA 59.836 45.455 7.64 0.00 0.00 1.94
536 537 1.744522 GGAACCGGGCGCTAATTAAAA 59.255 47.619 7.64 0.00 0.00 1.52
537 538 1.339824 TGGAACCGGGCGCTAATTAAA 60.340 47.619 7.64 0.00 0.00 1.52
538 539 0.252479 TGGAACCGGGCGCTAATTAA 59.748 50.000 7.64 0.00 0.00 1.40
539 540 0.252479 TTGGAACCGGGCGCTAATTA 59.748 50.000 7.64 0.00 0.00 1.40
540 541 1.001887 TTGGAACCGGGCGCTAATT 60.002 52.632 7.64 0.00 0.00 1.40
541 542 1.747745 GTTGGAACCGGGCGCTAAT 60.748 57.895 7.64 0.00 0.00 1.73
542 543 2.358984 GTTGGAACCGGGCGCTAA 60.359 61.111 7.64 0.00 0.00 3.09
543 544 2.677765 TTTGTTGGAACCGGGCGCTA 62.678 55.000 7.64 0.00 0.00 4.26
544 545 4.572571 TTGTTGGAACCGGGCGCT 62.573 61.111 7.64 0.00 0.00 5.92
545 546 2.630592 TTTTTGTTGGAACCGGGCGC 62.631 55.000 6.32 0.00 0.00 6.53
546 547 1.437986 TTTTTGTTGGAACCGGGCG 59.562 52.632 6.32 0.00 0.00 6.13
566 567 9.602568 TTTGGTTTATTTAGACAAGGTTTTTCC 57.397 29.630 0.00 0.00 0.00 3.13
599 600 0.322816 TACTAGGAACGACTGCGGGT 60.323 55.000 0.00 0.00 43.17 5.28
602 603 1.794437 GCTGTACTAGGAACGACTGCG 60.794 57.143 0.00 0.00 44.79 5.18
705 706 1.172180 TCGTTTACAGGGTCGTCGGT 61.172 55.000 0.00 0.00 0.00 4.69
728 729 4.096003 CGCTTCCCGGGTCCATGT 62.096 66.667 22.86 0.00 0.00 3.21
776 777 2.819115 CCTGTGATCTCTGATCGGTTG 58.181 52.381 0.42 0.00 0.00 3.77
839 840 4.642437 GGCCTTATATAGTACGGGGTCTAC 59.358 50.000 0.00 0.00 0.00 2.59
843 844 3.438183 CAGGCCTTATATAGTACGGGGT 58.562 50.000 0.00 0.00 0.00 4.95
844 845 2.764572 CCAGGCCTTATATAGTACGGGG 59.235 54.545 0.00 0.00 0.00 5.73
850 854 3.097614 CGGTAGCCAGGCCTTATATAGT 58.902 50.000 8.22 0.00 0.00 2.12
893 899 0.179065 TCTGCGATGATGCTTCCTGG 60.179 55.000 0.00 0.00 35.36 4.45
900 906 1.066757 TCTGTCTCTCTGCGATGATGC 59.933 52.381 0.00 0.00 0.00 3.91
907 913 1.935873 CTCTCTCTCTGTCTCTCTGCG 59.064 57.143 0.00 0.00 0.00 5.18
917 1262 2.615447 CTGACAGCTAGCTCTCTCTCTG 59.385 54.545 16.15 4.38 0.00 3.35
1110 1456 1.464997 GTTGCAGAAACGATGGAGGTC 59.535 52.381 0.00 0.00 0.00 3.85
1149 1523 2.095110 TCGATCGAGGAACTAACGCAAA 60.095 45.455 15.15 0.00 41.55 3.68
1190 1612 5.750352 TTTTGAAACGGAGGGATAGTACT 57.250 39.130 0.00 0.00 0.00 2.73
1192 1614 7.043565 GTGTATTTTGAAACGGAGGGATAGTA 58.956 38.462 0.00 0.00 0.00 1.82
1195 1617 5.045432 AGGTGTATTTTGAAACGGAGGGATA 60.045 40.000 0.00 0.00 0.00 2.59
1196 1618 4.014406 GGTGTATTTTGAAACGGAGGGAT 58.986 43.478 0.00 0.00 0.00 3.85
1209 1631 2.236489 AGCCATGGCAGGTGTATTTT 57.764 45.000 37.18 10.88 44.88 1.82
1218 1640 1.250328 TTGAACTGAAGCCATGGCAG 58.750 50.000 37.18 27.28 44.88 4.85
1238 1682 5.520376 AAGTGCAGCAACTTAGTTCAAAT 57.480 34.783 0.00 0.00 38.62 2.32
1240 1684 4.157656 ACAAAGTGCAGCAACTTAGTTCAA 59.842 37.500 0.00 0.00 39.48 2.69
1242 1686 4.292977 ACAAAGTGCAGCAACTTAGTTC 57.707 40.909 0.00 0.00 39.48 3.01
1243 1687 6.710744 AGTATACAAAGTGCAGCAACTTAGTT 59.289 34.615 5.50 0.00 39.48 2.24
1244 1688 6.231211 AGTATACAAAGTGCAGCAACTTAGT 58.769 36.000 5.50 0.00 39.48 2.24
1245 1689 6.727824 AGTATACAAAGTGCAGCAACTTAG 57.272 37.500 5.50 0.00 39.48 2.18
1246 1690 9.529325 CTATAGTATACAAAGTGCAGCAACTTA 57.471 33.333 5.50 0.00 39.48 2.24
1289 1761 4.211374 CGGGAAAACATATACTACTGCTGC 59.789 45.833 0.00 0.00 0.00 5.25
1290 1762 5.597806 TCGGGAAAACATATACTACTGCTG 58.402 41.667 0.00 0.00 0.00 4.41
1447 1940 3.951663 ACCTGTTCATTGGCTTAGTACC 58.048 45.455 0.00 0.00 0.00 3.34
1474 1973 8.834004 AGTACCCAAACACTGATAGTCTATAA 57.166 34.615 0.00 0.00 0.00 0.98
1477 1976 7.233962 TCAAAGTACCCAAACACTGATAGTCTA 59.766 37.037 0.00 0.00 0.00 2.59
1479 1978 6.228258 TCAAAGTACCCAAACACTGATAGTC 58.772 40.000 0.00 0.00 0.00 2.59
1480 1979 6.182507 TCAAAGTACCCAAACACTGATAGT 57.817 37.500 0.00 0.00 0.00 2.12
1481 1980 7.687941 ATTCAAAGTACCCAAACACTGATAG 57.312 36.000 0.00 0.00 0.00 2.08
1483 1982 6.976934 AATTCAAAGTACCCAAACACTGAT 57.023 33.333 0.00 0.00 0.00 2.90
1484 1983 6.605594 AGAAATTCAAAGTACCCAAACACTGA 59.394 34.615 0.00 0.00 0.00 3.41
1558 2057 4.678509 TTCATGTGGTAGAAAATGCGTC 57.321 40.909 0.00 0.00 0.00 5.19
1576 2075 9.787435 TTTCCTAGTAGAAAATACAAGCTTTCA 57.213 29.630 0.00 0.00 34.60 2.69
1599 2101 7.460296 CCAACAAAAATGGTTAGTGTTGTTTC 58.540 34.615 12.35 0.00 44.78 2.78
1975 2478 4.899239 GCGAGATGCCCCTGACCG 62.899 72.222 0.00 0.00 37.76 4.79
2064 2567 3.179443 AGCATCGTCACACGGATTAAT 57.821 42.857 0.00 0.00 42.81 1.40
2140 2643 8.593945 TGAGCCCTAATTCTGATTTTAAATGT 57.406 30.769 0.00 0.00 0.00 2.71
2142 2645 9.652114 AGATGAGCCCTAATTCTGATTTTAAAT 57.348 29.630 0.00 0.00 0.00 1.40
2143 2646 9.125026 GAGATGAGCCCTAATTCTGATTTTAAA 57.875 33.333 0.00 0.00 0.00 1.52
2145 2648 7.805163 TGAGATGAGCCCTAATTCTGATTTTA 58.195 34.615 0.00 0.00 0.00 1.52
2146 2649 6.666678 TGAGATGAGCCCTAATTCTGATTTT 58.333 36.000 0.00 0.00 0.00 1.82
2147 2650 6.257994 TGAGATGAGCCCTAATTCTGATTT 57.742 37.500 0.00 0.00 0.00 2.17
2151 2654 7.768120 GGTATAATGAGATGAGCCCTAATTCTG 59.232 40.741 0.00 0.00 0.00 3.02
2152 2655 7.682028 AGGTATAATGAGATGAGCCCTAATTCT 59.318 37.037 0.00 0.00 0.00 2.40
2153 2656 7.768120 CAGGTATAATGAGATGAGCCCTAATTC 59.232 40.741 0.00 0.00 0.00 2.17
2154 2657 7.459125 TCAGGTATAATGAGATGAGCCCTAATT 59.541 37.037 0.00 0.00 0.00 1.40
2156 2659 6.322931 TCAGGTATAATGAGATGAGCCCTAA 58.677 40.000 0.00 0.00 0.00 2.69
2157 2660 5.903923 TCAGGTATAATGAGATGAGCCCTA 58.096 41.667 0.00 0.00 0.00 3.53
2158 2661 4.756564 TCAGGTATAATGAGATGAGCCCT 58.243 43.478 0.00 0.00 0.00 5.19
2159 2662 5.489792 TTCAGGTATAATGAGATGAGCCC 57.510 43.478 0.00 0.00 0.00 5.19
2160 2663 7.663081 TCAAATTCAGGTATAATGAGATGAGCC 59.337 37.037 0.00 0.00 0.00 4.70
2161 2664 8.613060 TCAAATTCAGGTATAATGAGATGAGC 57.387 34.615 0.00 0.00 0.00 4.26
2164 2667 7.961283 CGCATCAAATTCAGGTATAATGAGATG 59.039 37.037 0.00 0.00 34.64 2.90
2166 2669 7.216494 TCGCATCAAATTCAGGTATAATGAGA 58.784 34.615 0.00 0.00 0.00 3.27
2167 2670 7.360691 CCTCGCATCAAATTCAGGTATAATGAG 60.361 40.741 0.00 0.00 0.00 2.90
2168 2671 6.427853 CCTCGCATCAAATTCAGGTATAATGA 59.572 38.462 0.00 0.00 0.00 2.57
2169 2672 6.605849 CCTCGCATCAAATTCAGGTATAATG 58.394 40.000 0.00 0.00 0.00 1.90
2171 2674 4.515191 GCCTCGCATCAAATTCAGGTATAA 59.485 41.667 0.00 0.00 0.00 0.98
2173 2676 2.880890 GCCTCGCATCAAATTCAGGTAT 59.119 45.455 0.00 0.00 0.00 2.73
2174 2677 2.288666 GCCTCGCATCAAATTCAGGTA 58.711 47.619 0.00 0.00 0.00 3.08
2175 2678 1.098050 GCCTCGCATCAAATTCAGGT 58.902 50.000 0.00 0.00 0.00 4.00
2178 2681 1.885233 TGTTGCCTCGCATCAAATTCA 59.115 42.857 0.00 0.00 38.76 2.57
2179 2682 2.095059 ACTGTTGCCTCGCATCAAATTC 60.095 45.455 0.00 0.00 37.72 2.17
2183 2686 1.001487 CAAACTGTTGCCTCGCATCAA 60.001 47.619 0.00 0.00 37.72 2.57
2184 2687 0.592637 CAAACTGTTGCCTCGCATCA 59.407 50.000 0.00 0.00 38.76 3.07
2185 2688 0.593128 ACAAACTGTTGCCTCGCATC 59.407 50.000 0.00 0.00 38.76 3.91
2186 2689 1.890876 TACAAACTGTTGCCTCGCAT 58.109 45.000 0.00 0.00 38.76 4.73
2187 2690 1.332375 GTTACAAACTGTTGCCTCGCA 59.668 47.619 0.00 0.00 38.39 5.10
2188 2691 1.602377 AGTTACAAACTGTTGCCTCGC 59.398 47.619 0.00 0.00 41.01 5.03
2189 2692 5.412526 TTTAGTTACAAACTGTTGCCTCG 57.587 39.130 2.59 0.00 42.84 4.63
2190 2693 8.319143 TCTATTTAGTTACAAACTGTTGCCTC 57.681 34.615 2.59 0.00 42.84 4.70
2191 2694 8.685838 TTCTATTTAGTTACAAACTGTTGCCT 57.314 30.769 2.59 0.00 42.84 4.75
2197 2700 9.922305 GCTGCTATTCTATTTAGTTACAAACTG 57.078 33.333 2.59 0.00 42.84 3.16
2198 2701 9.892130 AGCTGCTATTCTATTTAGTTACAAACT 57.108 29.630 0.00 0.00 45.40 2.66
2201 2704 9.534565 CAGAGCTGCTATTCTATTTAGTTACAA 57.465 33.333 0.15 0.00 0.00 2.41
2202 2705 8.696374 ACAGAGCTGCTATTCTATTTAGTTACA 58.304 33.333 0.15 0.00 0.00 2.41
2203 2706 9.535878 AACAGAGCTGCTATTCTATTTAGTTAC 57.464 33.333 0.15 0.00 0.00 2.50
2205 2708 9.454859 AAAACAGAGCTGCTATTCTATTTAGTT 57.545 29.630 0.15 0.00 0.00 2.24
2206 2709 9.103861 GAAAACAGAGCTGCTATTCTATTTAGT 57.896 33.333 0.15 0.00 0.00 2.24
2207 2710 8.555361 GGAAAACAGAGCTGCTATTCTATTTAG 58.445 37.037 0.15 0.00 0.00 1.85
2208 2711 7.499232 GGGAAAACAGAGCTGCTATTCTATTTA 59.501 37.037 0.15 0.00 0.00 1.40
2209 2712 6.319911 GGGAAAACAGAGCTGCTATTCTATTT 59.680 38.462 0.15 0.00 0.00 1.40
2210 2713 5.825151 GGGAAAACAGAGCTGCTATTCTATT 59.175 40.000 0.15 0.00 0.00 1.73
2211 2714 5.372373 GGGAAAACAGAGCTGCTATTCTAT 58.628 41.667 0.15 0.00 0.00 1.98
2212 2715 4.384208 GGGGAAAACAGAGCTGCTATTCTA 60.384 45.833 0.15 0.00 0.00 2.10
2213 2716 3.615155 GGGAAAACAGAGCTGCTATTCT 58.385 45.455 0.15 0.00 0.00 2.40
2214 2717 2.685388 GGGGAAAACAGAGCTGCTATTC 59.315 50.000 0.15 2.88 0.00 1.75
2215 2718 2.728007 GGGGAAAACAGAGCTGCTATT 58.272 47.619 0.15 0.00 0.00 1.73
2216 2719 1.407437 CGGGGAAAACAGAGCTGCTAT 60.407 52.381 0.15 0.00 0.00 2.97
2217 2720 0.036388 CGGGGAAAACAGAGCTGCTA 60.036 55.000 0.15 0.00 0.00 3.49
2218 2721 1.302832 CGGGGAAAACAGAGCTGCT 60.303 57.895 0.00 0.00 0.00 4.24
2219 2722 1.172812 AACGGGGAAAACAGAGCTGC 61.173 55.000 0.00 0.00 0.00 5.25
2220 2723 1.318576 AAACGGGGAAAACAGAGCTG 58.681 50.000 0.00 0.00 0.00 4.24
2221 2724 1.954382 GAAAACGGGGAAAACAGAGCT 59.046 47.619 0.00 0.00 0.00 4.09
2222 2725 1.954382 AGAAAACGGGGAAAACAGAGC 59.046 47.619 0.00 0.00 0.00 4.09
2223 2726 3.211045 TGAGAAAACGGGGAAAACAGAG 58.789 45.455 0.00 0.00 0.00 3.35
2229 2732 6.321690 TCTGTTATTTTGAGAAAACGGGGAAA 59.678 34.615 0.00 0.00 32.37 3.13
2232 2735 5.699097 TCTGTTATTTTGAGAAAACGGGG 57.301 39.130 0.00 0.00 32.37 5.73
2233 2736 7.169140 CCTTTTCTGTTATTTTGAGAAAACGGG 59.831 37.037 0.00 0.00 39.58 5.28
2247 2750 9.227777 GTGTGTTTACTATCCCTTTTCTGTTAT 57.772 33.333 0.00 0.00 0.00 1.89
2253 2756 9.836076 GTATTTGTGTGTTTACTATCCCTTTTC 57.164 33.333 0.00 0.00 0.00 2.29
2258 2761 6.541278 GGGAGTATTTGTGTGTTTACTATCCC 59.459 42.308 0.00 0.00 0.00 3.85
2260 2763 7.494952 GGAGGGAGTATTTGTGTGTTTACTATC 59.505 40.741 0.00 0.00 0.00 2.08
2263 2766 5.557866 GGAGGGAGTATTTGTGTGTTTACT 58.442 41.667 0.00 0.00 0.00 2.24
2275 2778 2.750141 TACTGAGCGGAGGGAGTATT 57.250 50.000 0.00 0.00 0.00 1.89
2280 2783 4.673968 ACATATAATACTGAGCGGAGGGA 58.326 43.478 0.00 0.00 0.00 4.20
2332 2845 4.014847 ACAAACACACTGAAACATGTCG 57.985 40.909 0.00 0.00 0.00 4.35
2337 2850 4.517075 TGAGTGAACAAACACACTGAAACA 59.483 37.500 0.00 0.00 45.54 2.83
2342 2855 5.639757 TGAAATGAGTGAACAAACACACTG 58.360 37.500 0.00 0.00 45.54 3.66
2358 2871 3.449377 TGGCTACATACGGACTGAAATGA 59.551 43.478 7.93 0.00 0.00 2.57
2451 2965 8.771920 ATTTTGAGTTGTCTCGTGTCATATTA 57.228 30.769 0.00 0.00 43.09 0.98
2597 3112 5.186992 TCTCCATCGTGATTTAAAGGAGACA 59.813 40.000 13.36 0.00 43.67 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.