Multiple sequence alignment - TraesCS6B01G180300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G180300 chr6B 100.000 4945 0 0 1 4945 200513019 200508075 0.000000e+00 9132.0
1 TraesCS6B01G180300 chr6B 96.795 312 7 2 2684 2992 132149382 132149071 7.340000e-143 518.0
2 TraesCS6B01G180300 chr6B 96.396 222 5 1 2471 2689 21425147 21424926 3.640000e-96 363.0
3 TraesCS6B01G180300 chr6D 92.614 1882 67 28 3006 4865 111568571 111566740 0.000000e+00 2639.0
4 TraesCS6B01G180300 chr6D 96.982 1458 29 6 986 2435 111570036 111568586 0.000000e+00 2435.0
5 TraesCS6B01G180300 chr6D 88.911 1001 68 11 1 987 111571042 111570071 0.000000e+00 1194.0
6 TraesCS6B01G180300 chr6D 83.714 657 104 3 77 731 393928156 393927501 7.030000e-173 617.0
7 TraesCS6B01G180300 chr6D 92.958 71 2 2 4878 4945 111566378 111566308 3.150000e-17 100.0
8 TraesCS6B01G180300 chr6A 92.776 1412 66 12 986 2369 136541521 136542924 0.000000e+00 2010.0
9 TraesCS6B01G180300 chr6A 88.257 1601 87 38 3009 4582 136543281 136544807 0.000000e+00 1821.0
10 TraesCS6B01G180300 chr6A 84.111 1007 122 21 1 986 136540496 136541485 0.000000e+00 939.0
11 TraesCS6B01G180300 chr6A 97.097 310 8 1 2684 2992 543392913 543392604 5.670000e-144 521.0
12 TraesCS6B01G180300 chr5B 95.796 333 13 1 2684 3015 641303610 641303278 2.030000e-148 536.0
13 TraesCS6B01G180300 chr5B 97.727 44 1 0 2432 2475 572739202 572739159 5.310000e-10 76.8
14 TraesCS6B01G180300 chr7B 96.037 328 11 2 2684 3009 709375811 709375484 2.620000e-147 532.0
15 TraesCS6B01G180300 chr7B 79.538 650 122 8 115 762 470525543 470526183 2.100000e-123 453.0
16 TraesCS6B01G180300 chr7B 77.827 672 129 15 77 733 730392535 730393201 9.970000e-107 398.0
17 TraesCS6B01G180300 chr7B 82.906 117 14 3 4490 4606 699358264 699358374 3.150000e-17 100.0
18 TraesCS6B01G180300 chr2B 97.742 310 6 1 2684 2992 235161372 235161681 2.620000e-147 532.0
19 TraesCS6B01G180300 chr2B 97.419 310 6 2 2684 2992 264573768 264573460 1.220000e-145 527.0
20 TraesCS6B01G180300 chr2B 96.012 326 7 5 2684 3006 396406206 396405884 4.390000e-145 525.0
21 TraesCS6B01G180300 chr2B 77.666 694 145 9 77 764 153229909 153230598 9.900000e-112 414.0
22 TraesCS6B01G180300 chr2B 78.095 630 125 10 80 705 705878990 705878370 2.160000e-103 387.0
23 TraesCS6B01G180300 chr2B 94.690 226 9 3 2467 2689 457603519 457603294 1.020000e-91 348.0
24 TraesCS6B01G180300 chr2B 94.248 226 12 1 2468 2693 137891982 137892206 1.320000e-90 344.0
25 TraesCS6B01G180300 chr2B 87.395 119 9 5 1558 1676 725579767 725579655 1.120000e-26 132.0
26 TraesCS6B01G180300 chr2B 92.754 69 1 3 2 66 351989290 351989222 4.070000e-16 97.1
27 TraesCS6B01G180300 chr3B 96.296 324 11 1 2684 3006 41519822 41520145 9.430000e-147 531.0
28 TraesCS6B01G180300 chr3B 96.296 216 7 1 2472 2686 134090089 134090304 2.190000e-93 353.0
29 TraesCS6B01G180300 chr4B 97.097 310 8 1 2684 2992 530463533 530463842 5.670000e-144 521.0
30 TraesCS6B01G180300 chr4B 91.176 68 3 2 2 66 96706347 96706280 6.820000e-14 89.8
31 TraesCS6B01G180300 chr4B 100.000 40 0 0 2433 2472 530463496 530463535 1.910000e-09 75.0
32 TraesCS6B01G180300 chr4B 100.000 40 0 0 2433 2472 660181139 660181178 1.910000e-09 75.0
33 TraesCS6B01G180300 chr4D 79.336 663 130 7 73 731 484587098 484586439 4.510000e-125 459.0
34 TraesCS6B01G180300 chr4D 100.000 28 0 0 4551 4578 101625875 101625902 9.000000e-03 52.8
35 TraesCS6B01G180300 chr7A 78.520 689 139 8 72 754 89112865 89113550 1.260000e-120 444.0
36 TraesCS6B01G180300 chr7A 95.475 221 7 3 2469 2686 538153171 538153391 2.830000e-92 350.0
37 TraesCS6B01G180300 chr7A 82.680 306 30 16 1414 1718 685213048 685213331 2.960000e-62 250.0
38 TraesCS6B01G180300 chr7A 92.157 51 3 1 2423 2472 527143440 527143490 2.470000e-08 71.3
39 TraesCS6B01G180300 chr2D 81.667 540 94 4 78 615 423615399 423614863 1.260000e-120 444.0
40 TraesCS6B01G180300 chr2D 90.476 105 7 2 1558 1662 596553610 596553509 8.630000e-28 135.0
41 TraesCS6B01G180300 chr2A 77.912 661 134 11 72 729 113602332 113601681 7.710000e-108 401.0
42 TraesCS6B01G180300 chr2A 90.476 105 7 2 1558 1662 730616897 730616796 8.630000e-28 135.0
43 TraesCS6B01G180300 chr2A 97.778 45 1 0 2431 2475 418820497 418820453 1.480000e-10 78.7
44 TraesCS6B01G180300 chr1B 96.847 222 4 1 2471 2689 555003167 555003388 7.820000e-98 368.0
45 TraesCS6B01G180300 chr1B 96.396 222 5 1 2471 2689 555055509 555055730 3.640000e-96 363.0
46 TraesCS6B01G180300 chr3A 95.946 222 6 1 2468 2686 606427829 606427608 1.690000e-94 357.0
47 TraesCS6B01G180300 chr5A 91.803 244 12 6 2449 2689 430028639 430028401 2.850000e-87 333.0
48 TraesCS6B01G180300 chr7D 86.111 108 10 4 2106 2208 592633551 592633658 1.460000e-20 111.0
49 TraesCS6B01G180300 chr5D 76.444 225 32 11 4424 4645 350227237 350227443 8.760000e-18 102.0
50 TraesCS6B01G180300 chr1A 89.474 76 5 2 1 73 451380671 451380596 5.270000e-15 93.5
51 TraesCS6B01G180300 chr1A 100.000 41 0 0 2432 2472 9476895 9476935 5.310000e-10 76.8
52 TraesCS6B01G180300 chr4A 100.000 40 0 0 2433 2472 598727931 598727970 1.910000e-09 75.0
53 TraesCS6B01G180300 chr4A 100.000 40 0 0 2433 2472 742587818 742587857 1.910000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G180300 chr6B 200508075 200513019 4944 True 9132 9132 100.000000 1 4945 1 chr6B.!!$R3 4944
1 TraesCS6B01G180300 chr6D 111566308 111571042 4734 True 1592 2639 92.866250 1 4945 4 chr6D.!!$R2 4944
2 TraesCS6B01G180300 chr6D 393927501 393928156 655 True 617 617 83.714000 77 731 1 chr6D.!!$R1 654
3 TraesCS6B01G180300 chr6A 136540496 136544807 4311 False 1590 2010 88.381333 1 4582 3 chr6A.!!$F1 4581
4 TraesCS6B01G180300 chr7B 470525543 470526183 640 False 453 453 79.538000 115 762 1 chr7B.!!$F1 647
5 TraesCS6B01G180300 chr7B 730392535 730393201 666 False 398 398 77.827000 77 733 1 chr7B.!!$F3 656
6 TraesCS6B01G180300 chr2B 153229909 153230598 689 False 414 414 77.666000 77 764 1 chr2B.!!$F2 687
7 TraesCS6B01G180300 chr2B 705878370 705878990 620 True 387 387 78.095000 80 705 1 chr2B.!!$R5 625
8 TraesCS6B01G180300 chr4D 484586439 484587098 659 True 459 459 79.336000 73 731 1 chr4D.!!$R1 658
9 TraesCS6B01G180300 chr7A 89112865 89113550 685 False 444 444 78.520000 72 754 1 chr7A.!!$F1 682
10 TraesCS6B01G180300 chr2D 423614863 423615399 536 True 444 444 81.667000 78 615 1 chr2D.!!$R1 537
11 TraesCS6B01G180300 chr2A 113601681 113602332 651 True 401 401 77.912000 72 729 1 chr2A.!!$R1 657

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
226 232 0.947180 GTCTGCCACCGCGTTTAGAA 60.947 55.0 4.92 0.0 38.08 2.10 F
1050 1126 0.391130 GTTACGCTCCCATGCAGTCA 60.391 55.0 0.00 0.0 0.00 3.41 F
2840 3222 0.185175 GTCAGGGGTGTTTGGAGGTT 59.815 55.0 0.00 0.0 0.00 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1199 1275 0.392193 CTGCTGGAGCTGGTTACTGG 60.392 60.0 0.00 0.00 42.66 4.00 R
2923 3305 0.104620 AACACCCCTGACTAGTGGGT 60.105 55.0 15.16 15.16 43.97 4.51 R
4820 5245 1.363744 CACGAGGTCCTTGCTTCATC 58.636 55.0 5.98 0.00 0.00 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 130 4.435436 CGCCTACTGCCTCGCACA 62.435 66.667 0.00 0.00 36.24 4.57
167 173 2.465774 CGTTGAATGACGCCCATGA 58.534 52.632 0.00 0.00 36.12 3.07
176 182 3.576356 CGCCCATGATGCGTCCAC 61.576 66.667 17.92 0.00 46.59 4.02
226 232 0.947180 GTCTGCCACCGCGTTTAGAA 60.947 55.000 4.92 0.00 38.08 2.10
419 426 2.746277 GCCGCGTGGGATGAGTTT 60.746 61.111 18.41 0.00 38.47 2.66
433 440 1.475280 TGAGTTTAGGGTCGACGGATG 59.525 52.381 9.92 0.00 0.00 3.51
452 459 1.379977 TAGAGGTGCAGGACTCGGG 60.380 63.158 7.19 0.00 38.72 5.14
535 554 6.295349 GGAGAAGAGTGGAGTGAAGTGATTAA 60.295 42.308 0.00 0.00 0.00 1.40
680 703 3.626924 GGTGCCGGTCAGTCTGGT 61.627 66.667 1.90 0.00 44.16 4.00
708 731 0.947180 GCCCGTTTGAAGCGTCTGTA 60.947 55.000 0.31 0.00 0.00 2.74
714 737 3.242091 CGTTTGAAGCGTCTGTATGGATG 60.242 47.826 0.31 0.00 0.00 3.51
764 787 3.009723 GGCATTTGAGACGGATTTGAGA 58.990 45.455 0.00 0.00 0.00 3.27
772 795 1.404391 GACGGATTTGAGACGCCTCTA 59.596 52.381 0.00 0.00 40.10 2.43
1050 1126 0.391130 GTTACGCTCCCATGCAGTCA 60.391 55.000 0.00 0.00 0.00 3.41
1071 1147 2.282462 CCCAACTTTGAGCCGGCT 60.282 61.111 33.48 33.48 0.00 5.52
1317 1393 1.202428 GGTATGCTGACGTCTTCCTCC 60.202 57.143 17.92 8.55 0.00 4.30
1816 1912 0.863538 CTAGTGCACAGACGCTAGCG 60.864 60.000 34.27 34.27 42.15 4.26
1907 2007 0.823769 TCCTCTGAGCGTATCGGCAT 60.824 55.000 0.00 0.00 33.93 4.40
1908 2008 0.387878 CCTCTGAGCGTATCGGCATC 60.388 60.000 0.00 0.00 33.93 3.91
1909 2009 0.595588 CTCTGAGCGTATCGGCATCT 59.404 55.000 0.00 0.00 33.93 2.90
1910 2010 0.312102 TCTGAGCGTATCGGCATCTG 59.688 55.000 0.00 0.00 33.93 2.90
1911 2011 1.280886 CTGAGCGTATCGGCATCTGC 61.281 60.000 0.00 0.00 41.14 4.26
1912 2012 1.300156 GAGCGTATCGGCATCTGCA 60.300 57.895 4.33 0.00 44.36 4.41
1970 2070 3.631159 CATCATGGCATTGCAATGGTGC 61.631 50.000 34.23 24.53 42.99 5.01
1989 2089 4.202121 GGTGCTCGATCAGATACCTAAACA 60.202 45.833 0.00 0.00 34.81 2.83
2098 2206 3.377798 TGTTTCCTGTTTGGGTACGTTTC 59.622 43.478 0.00 0.00 36.20 2.78
2285 2393 1.751924 GGCGATCACAGGAGTAAGACT 59.248 52.381 0.00 0.00 0.00 3.24
2441 2823 6.319141 GCTTAGCCAATATTTTAGAGGGTG 57.681 41.667 0.00 0.00 0.00 4.61
2442 2824 5.828328 GCTTAGCCAATATTTTAGAGGGTGT 59.172 40.000 0.00 0.00 0.00 4.16
2444 2826 7.147897 GCTTAGCCAATATTTTAGAGGGTGTTT 60.148 37.037 0.00 0.00 0.00 2.83
2445 2827 6.530019 AGCCAATATTTTAGAGGGTGTTTG 57.470 37.500 0.00 0.00 0.00 2.93
2446 2828 5.422012 AGCCAATATTTTAGAGGGTGTTTGG 59.578 40.000 0.00 0.00 35.36 3.28
2448 2830 6.098266 GCCAATATTTTAGAGGGTGTTTGGAT 59.902 38.462 0.00 0.00 34.40 3.41
2449 2831 7.286775 GCCAATATTTTAGAGGGTGTTTGGATA 59.713 37.037 0.00 0.00 34.40 2.59
2450 2832 8.630037 CCAATATTTTAGAGGGTGTTTGGATAC 58.370 37.037 0.00 0.00 34.40 2.24
2451 2833 9.408648 CAATATTTTAGAGGGTGTTTGGATACT 57.591 33.333 0.00 0.00 37.61 2.12
2452 2834 9.628500 AATATTTTAGAGGGTGTTTGGATACTC 57.372 33.333 0.00 0.00 37.61 2.59
2453 2835 6.697641 TTTTAGAGGGTGTTTGGATACTCT 57.302 37.500 0.00 0.00 38.67 3.24
2454 2836 5.934402 TTAGAGGGTGTTTGGATACTCTC 57.066 43.478 0.00 0.00 42.91 3.20
2455 2837 4.067944 AGAGGGTGTTTGGATACTCTCT 57.932 45.455 1.11 1.11 46.43 3.10
2457 2839 5.523438 GAGGGTGTTTGGATACTCTCTAG 57.477 47.826 0.00 0.00 40.33 2.43
2458 2840 4.949121 AGGGTGTTTGGATACTCTCTAGT 58.051 43.478 0.00 0.00 39.91 2.57
2459 2841 4.957327 AGGGTGTTTGGATACTCTCTAGTC 59.043 45.833 0.00 0.00 37.15 2.59
2460 2842 4.710375 GGGTGTTTGGATACTCTCTAGTCA 59.290 45.833 0.00 0.00 37.15 3.41
2461 2843 5.364157 GGGTGTTTGGATACTCTCTAGTCAT 59.636 44.000 0.00 0.00 37.15 3.06
2462 2844 6.276847 GGTGTTTGGATACTCTCTAGTCATG 58.723 44.000 0.00 0.00 37.15 3.07
2463 2845 6.127310 GGTGTTTGGATACTCTCTAGTCATGT 60.127 42.308 0.00 0.00 37.15 3.21
2464 2846 6.754209 GTGTTTGGATACTCTCTAGTCATGTG 59.246 42.308 0.00 0.00 37.15 3.21
2465 2847 6.663523 TGTTTGGATACTCTCTAGTCATGTGA 59.336 38.462 0.00 0.00 37.15 3.58
2466 2848 6.701145 TTGGATACTCTCTAGTCATGTGAC 57.299 41.667 5.01 5.01 40.95 3.67
2468 2850 7.138054 TGGATACTCTCTAGTCATGTGACTA 57.862 40.000 18.83 18.83 45.93 2.59
2479 2861 5.754543 GTCATGTGACTAGTACTACCTCC 57.245 47.826 0.00 0.00 41.65 4.30
2480 2862 4.272991 GTCATGTGACTAGTACTACCTCCG 59.727 50.000 0.00 0.00 41.65 4.63
2481 2863 3.988976 TGTGACTAGTACTACCTCCGT 57.011 47.619 0.00 0.00 0.00 4.69
2482 2864 3.866651 TGTGACTAGTACTACCTCCGTC 58.133 50.000 10.72 10.72 0.00 4.79
2483 2865 3.517100 TGTGACTAGTACTACCTCCGTCT 59.483 47.826 16.02 0.00 0.00 4.18
2484 2866 4.119136 GTGACTAGTACTACCTCCGTCTC 58.881 52.174 16.02 11.01 0.00 3.36
2485 2867 3.181482 TGACTAGTACTACCTCCGTCTCG 60.181 52.174 16.02 0.53 0.00 4.04
2497 2879 2.933495 CCGTCTCGGTGAATAAGTCA 57.067 50.000 0.00 0.00 42.73 3.41
2498 2880 3.438297 CCGTCTCGGTGAATAAGTCAT 57.562 47.619 0.00 0.00 42.73 3.06
2499 2881 3.782046 CCGTCTCGGTGAATAAGTCATT 58.218 45.455 0.00 0.00 42.73 2.57
2500 2882 3.797256 CCGTCTCGGTGAATAAGTCATTC 59.203 47.826 0.00 0.00 42.73 2.67
2501 2883 3.482472 CGTCTCGGTGAATAAGTCATTCG 59.518 47.826 0.00 0.00 45.25 3.34
2508 2890 5.697848 GTGAATAAGTCATTCGCGTAGTT 57.302 39.130 5.77 2.59 45.25 2.24
2509 2891 5.715264 GTGAATAAGTCATTCGCGTAGTTC 58.285 41.667 5.77 0.29 45.25 3.01
2510 2892 5.515626 GTGAATAAGTCATTCGCGTAGTTCT 59.484 40.000 5.77 0.00 45.25 3.01
2511 2893 6.690098 GTGAATAAGTCATTCGCGTAGTTCTA 59.310 38.462 5.77 0.00 45.25 2.10
2512 2894 6.910972 TGAATAAGTCATTCGCGTAGTTCTAG 59.089 38.462 5.77 0.00 45.25 2.43
2513 2895 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
2514 2896 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
2515 2897 3.442977 AGTCATTCGCGTAGTTCTAGGTT 59.557 43.478 5.77 0.00 0.00 3.50
2516 2898 3.546670 GTCATTCGCGTAGTTCTAGGTTG 59.453 47.826 5.77 0.00 0.00 3.77
2517 2899 3.441222 TCATTCGCGTAGTTCTAGGTTGA 59.559 43.478 5.77 0.00 0.00 3.18
2518 2900 2.907910 TCGCGTAGTTCTAGGTTGAC 57.092 50.000 5.77 0.00 0.00 3.18
2519 2901 1.129251 TCGCGTAGTTCTAGGTTGACG 59.871 52.381 5.77 0.00 0.00 4.35
2520 2902 1.129251 CGCGTAGTTCTAGGTTGACGA 59.871 52.381 0.00 0.00 32.20 4.20
2521 2903 2.223203 CGCGTAGTTCTAGGTTGACGAT 60.223 50.000 0.00 0.00 32.20 3.73
2522 2904 3.730061 CGCGTAGTTCTAGGTTGACGATT 60.730 47.826 0.00 0.00 32.20 3.34
2523 2905 4.171754 GCGTAGTTCTAGGTTGACGATTT 58.828 43.478 10.86 0.00 32.20 2.17
2524 2906 5.335127 GCGTAGTTCTAGGTTGACGATTTA 58.665 41.667 10.86 0.00 32.20 1.40
2525 2907 5.801947 GCGTAGTTCTAGGTTGACGATTTAA 59.198 40.000 10.86 0.00 32.20 1.52
2526 2908 6.237411 GCGTAGTTCTAGGTTGACGATTTAAC 60.237 42.308 10.86 0.00 32.20 2.01
2527 2909 7.025963 CGTAGTTCTAGGTTGACGATTTAACT 58.974 38.462 0.00 0.00 32.20 2.24
2528 2910 8.177663 CGTAGTTCTAGGTTGACGATTTAACTA 58.822 37.037 0.00 0.00 32.20 2.24
2531 2913 8.968969 AGTTCTAGGTTGACGATTTAACTATCT 58.031 33.333 0.00 0.00 0.00 1.98
2647 3029 9.884636 TTTAATTTCTCAAATCGATGACCTAGA 57.115 29.630 0.00 0.00 0.00 2.43
2648 3030 9.884636 TTAATTTCTCAAATCGATGACCTAGAA 57.115 29.630 0.00 1.98 0.00 2.10
2649 3031 7.778470 ATTTCTCAAATCGATGACCTAGAAC 57.222 36.000 0.00 0.00 0.00 3.01
2650 3032 6.531503 TTCTCAAATCGATGACCTAGAACT 57.468 37.500 0.00 0.00 0.00 3.01
2651 3033 7.640597 TTCTCAAATCGATGACCTAGAACTA 57.359 36.000 0.00 0.00 0.00 2.24
2652 3034 7.028926 TCTCAAATCGATGACCTAGAACTAC 57.971 40.000 0.00 0.00 0.00 2.73
2653 3035 5.817988 TCAAATCGATGACCTAGAACTACG 58.182 41.667 0.00 0.00 0.00 3.51
2654 3036 3.900388 ATCGATGACCTAGAACTACGC 57.100 47.619 0.00 0.00 0.00 4.42
2655 3037 1.596260 TCGATGACCTAGAACTACGCG 59.404 52.381 3.53 3.53 0.00 6.01
2656 3038 1.596260 CGATGACCTAGAACTACGCGA 59.404 52.381 15.93 0.00 0.00 5.87
2657 3039 2.031314 CGATGACCTAGAACTACGCGAA 59.969 50.000 15.93 0.00 0.00 4.70
2658 3040 3.303857 CGATGACCTAGAACTACGCGAAT 60.304 47.826 15.93 0.00 0.00 3.34
2659 3041 3.416119 TGACCTAGAACTACGCGAATG 57.584 47.619 15.93 4.47 0.00 2.67
2660 3042 3.011818 TGACCTAGAACTACGCGAATGA 58.988 45.455 15.93 0.00 0.00 2.57
2661 3043 3.181503 TGACCTAGAACTACGCGAATGAC 60.182 47.826 15.93 0.66 0.00 3.06
2662 3044 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
2663 3045 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
2664 3046 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
2665 3047 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
2666 3048 6.183360 ACCTAGAACTACGCGAATGACTTATT 60.183 38.462 15.93 0.00 0.00 1.40
2667 3049 6.360148 CCTAGAACTACGCGAATGACTTATTC 59.640 42.308 15.93 3.24 41.46 1.75
2668 3050 5.647589 AGAACTACGCGAATGACTTATTCA 58.352 37.500 15.93 0.00 44.42 2.57
2669 3051 5.515626 AGAACTACGCGAATGACTTATTCAC 59.484 40.000 15.93 0.00 44.42 3.18
2670 3052 4.110482 ACTACGCGAATGACTTATTCACC 58.890 43.478 15.93 0.00 44.42 4.02
2671 3053 3.247006 ACGCGAATGACTTATTCACCT 57.753 42.857 15.93 0.00 44.42 4.00
2672 3054 4.380841 ACGCGAATGACTTATTCACCTA 57.619 40.909 15.93 0.00 44.42 3.08
2673 3055 4.360563 ACGCGAATGACTTATTCACCTAG 58.639 43.478 15.93 0.00 44.42 3.02
2674 3056 4.097437 ACGCGAATGACTTATTCACCTAGA 59.903 41.667 15.93 0.00 44.42 2.43
2675 3057 4.441415 CGCGAATGACTTATTCACCTAGAC 59.559 45.833 0.00 0.00 44.42 2.59
2676 3058 4.441415 GCGAATGACTTATTCACCTAGACG 59.559 45.833 0.00 0.00 44.42 4.18
2677 3059 4.976731 CGAATGACTTATTCACCTAGACGG 59.023 45.833 0.00 0.00 44.42 4.79
2678 3060 5.220989 CGAATGACTTATTCACCTAGACGGA 60.221 44.000 0.00 0.00 44.42 4.69
2679 3061 5.776173 ATGACTTATTCACCTAGACGGAG 57.224 43.478 0.00 0.00 36.92 4.63
2680 3062 3.952323 TGACTTATTCACCTAGACGGAGG 59.048 47.826 0.00 0.00 42.89 4.30
2687 3069 3.898969 CCTAGACGGAGGTGGTAGT 57.101 57.895 0.00 0.00 33.16 2.73
2689 3071 2.848691 CCTAGACGGAGGTGGTAGTAG 58.151 57.143 0.00 0.00 33.16 2.57
2690 3072 2.172293 CCTAGACGGAGGTGGTAGTAGT 59.828 54.545 0.00 0.00 33.16 2.73
2691 3073 2.416680 AGACGGAGGTGGTAGTAGTC 57.583 55.000 0.00 0.00 0.00 2.59
2692 3074 1.632409 AGACGGAGGTGGTAGTAGTCA 59.368 52.381 0.00 0.00 0.00 3.41
2693 3075 2.015587 GACGGAGGTGGTAGTAGTCAG 58.984 57.143 0.00 0.00 0.00 3.51
2694 3076 1.632409 ACGGAGGTGGTAGTAGTCAGA 59.368 52.381 0.00 0.00 0.00 3.27
2695 3077 2.015587 CGGAGGTGGTAGTAGTCAGAC 58.984 57.143 0.00 0.00 0.00 3.51
2696 3078 2.355920 CGGAGGTGGTAGTAGTCAGACT 60.356 54.545 8.50 8.50 0.00 3.24
2697 3079 3.118482 CGGAGGTGGTAGTAGTCAGACTA 60.118 52.174 6.15 6.15 0.00 2.59
2698 3080 4.453751 GGAGGTGGTAGTAGTCAGACTAG 58.546 52.174 10.81 0.00 32.56 2.57
2699 3081 4.163839 GGAGGTGGTAGTAGTCAGACTAGA 59.836 50.000 10.81 0.00 32.56 2.43
2700 3082 5.339035 GGAGGTGGTAGTAGTCAGACTAGAA 60.339 48.000 10.81 0.00 32.56 2.10
2701 3083 5.747342 AGGTGGTAGTAGTCAGACTAGAAG 58.253 45.833 10.81 0.00 32.56 2.85
2702 3084 5.251237 AGGTGGTAGTAGTCAGACTAGAAGT 59.749 44.000 10.81 0.00 32.56 3.01
2703 3085 5.945191 GGTGGTAGTAGTCAGACTAGAAGTT 59.055 44.000 10.81 0.00 32.56 2.66
2704 3086 6.433716 GGTGGTAGTAGTCAGACTAGAAGTTT 59.566 42.308 10.81 0.00 32.56 2.66
2705 3087 7.039853 GGTGGTAGTAGTCAGACTAGAAGTTTT 60.040 40.741 10.81 0.00 32.56 2.43
2706 3088 8.358895 GTGGTAGTAGTCAGACTAGAAGTTTTT 58.641 37.037 10.81 0.00 32.56 1.94
2707 3089 9.578576 TGGTAGTAGTCAGACTAGAAGTTTTTA 57.421 33.333 10.81 0.00 32.56 1.52
2711 3093 9.352191 AGTAGTCAGACTAGAAGTTTTTAGTCA 57.648 33.333 21.15 7.40 45.20 3.41
2712 3094 9.615295 GTAGTCAGACTAGAAGTTTTTAGTCAG 57.385 37.037 21.15 16.38 45.20 3.51
2713 3095 8.466617 AGTCAGACTAGAAGTTTTTAGTCAGA 57.533 34.615 21.15 17.72 45.20 3.27
2714 3096 8.510132 GTCAGACTAGAAGTTTTTAGTCAGAC 57.490 38.462 22.96 22.96 46.46 3.51
2715 3097 7.595875 GTCAGACTAGAAGTTTTTAGTCAGACC 59.404 40.741 24.69 15.82 46.58 3.85
2716 3098 6.869388 CAGACTAGAAGTTTTTAGTCAGACCC 59.131 42.308 21.15 4.21 45.20 4.46
2717 3099 6.783482 AGACTAGAAGTTTTTAGTCAGACCCT 59.217 38.462 21.15 5.95 45.20 4.34
2718 3100 6.760291 ACTAGAAGTTTTTAGTCAGACCCTG 58.240 40.000 0.00 0.00 0.00 4.45
2719 3101 5.632034 AGAAGTTTTTAGTCAGACCCTGT 57.368 39.130 0.00 0.00 32.61 4.00
2720 3102 6.002653 AGAAGTTTTTAGTCAGACCCTGTT 57.997 37.500 0.00 0.00 32.61 3.16
2721 3103 6.424032 AGAAGTTTTTAGTCAGACCCTGTTT 58.576 36.000 0.00 0.00 32.61 2.83
2722 3104 6.318900 AGAAGTTTTTAGTCAGACCCTGTTTG 59.681 38.462 0.00 0.00 32.61 2.93
2723 3105 4.887655 AGTTTTTAGTCAGACCCTGTTTGG 59.112 41.667 0.00 0.00 32.61 3.28
2724 3106 4.781775 TTTTAGTCAGACCCTGTTTGGA 57.218 40.909 0.00 0.00 38.35 3.53
2725 3107 4.781775 TTTAGTCAGACCCTGTTTGGAA 57.218 40.909 0.00 0.00 38.35 3.53
2726 3108 2.938956 AGTCAGACCCTGTTTGGAAG 57.061 50.000 0.00 0.00 38.35 3.46
2727 3109 1.421646 AGTCAGACCCTGTTTGGAAGG 59.578 52.381 0.00 0.00 38.35 3.46
2728 3110 1.143073 GTCAGACCCTGTTTGGAAGGT 59.857 52.381 0.00 0.00 38.35 3.50
2729 3111 1.142870 TCAGACCCTGTTTGGAAGGTG 59.857 52.381 0.00 0.00 38.35 4.00
2730 3112 1.142870 CAGACCCTGTTTGGAAGGTGA 59.857 52.381 0.00 0.00 38.35 4.02
2731 3113 1.143073 AGACCCTGTTTGGAAGGTGAC 59.857 52.381 0.00 0.00 38.35 3.67
2733 3115 2.370849 GACCCTGTTTGGAAGGTGACTA 59.629 50.000 0.00 0.00 42.68 2.59
2734 3116 2.105993 ACCCTGTTTGGAAGGTGACTAC 59.894 50.000 0.00 0.00 42.68 2.73
2735 3117 2.372172 CCCTGTTTGGAAGGTGACTACT 59.628 50.000 0.00 0.00 42.68 2.57
2736 3118 3.581332 CCCTGTTTGGAAGGTGACTACTA 59.419 47.826 0.00 0.00 42.68 1.82
2737 3119 4.562963 CCCTGTTTGGAAGGTGACTACTAC 60.563 50.000 0.00 0.00 42.68 2.73
2738 3120 4.283722 CCTGTTTGGAAGGTGACTACTACT 59.716 45.833 0.00 0.00 42.68 2.57
2739 3121 5.479375 CCTGTTTGGAAGGTGACTACTACTA 59.521 44.000 0.00 0.00 42.68 1.82
2740 3122 6.350277 CCTGTTTGGAAGGTGACTACTACTAG 60.350 46.154 0.00 0.00 42.68 2.57
2741 3123 6.073314 TGTTTGGAAGGTGACTACTACTAGT 58.927 40.000 0.00 0.00 42.68 2.57
2742 3124 6.208204 TGTTTGGAAGGTGACTACTACTAGTC 59.792 42.308 0.00 3.34 46.56 2.59
2754 3136 7.941431 ACTACTACTAGTCAGCACTAAATGT 57.059 36.000 0.00 0.00 34.53 2.71
2755 3137 7.987649 ACTACTACTAGTCAGCACTAAATGTC 58.012 38.462 0.00 0.00 34.53 3.06
2756 3138 7.830201 ACTACTACTAGTCAGCACTAAATGTCT 59.170 37.037 0.00 0.00 34.53 3.41
2757 3139 7.469537 ACTACTAGTCAGCACTAAATGTCTT 57.530 36.000 0.00 0.00 34.53 3.01
2758 3140 8.577048 ACTACTAGTCAGCACTAAATGTCTTA 57.423 34.615 0.00 0.00 34.53 2.10
2759 3141 8.679100 ACTACTAGTCAGCACTAAATGTCTTAG 58.321 37.037 0.00 0.00 34.53 2.18
2760 3142 7.469537 ACTAGTCAGCACTAAATGTCTTAGT 57.530 36.000 0.00 0.00 34.53 2.24
2761 3143 8.577048 ACTAGTCAGCACTAAATGTCTTAGTA 57.423 34.615 0.00 0.00 34.53 1.82
2762 3144 9.191479 ACTAGTCAGCACTAAATGTCTTAGTAT 57.809 33.333 0.00 0.00 34.53 2.12
2778 3160 9.555727 TGTCTTAGTATTAAATGTCCCTTATGC 57.444 33.333 0.00 0.00 0.00 3.14
2779 3161 9.555727 GTCTTAGTATTAAATGTCCCTTATGCA 57.444 33.333 0.00 0.00 0.00 3.96
2782 3164 9.688091 TTAGTATTAAATGTCCCTTATGCAACA 57.312 29.630 0.00 0.00 0.00 3.33
2783 3165 7.996385 AGTATTAAATGTCCCTTATGCAACAC 58.004 34.615 0.00 0.00 0.00 3.32
2784 3166 5.652994 TTAAATGTCCCTTATGCAACACC 57.347 39.130 0.00 0.00 0.00 4.16
2785 3167 2.897271 ATGTCCCTTATGCAACACCA 57.103 45.000 0.00 0.00 0.00 4.17
2786 3168 2.666272 TGTCCCTTATGCAACACCAA 57.334 45.000 0.00 0.00 0.00 3.67
2787 3169 3.168035 TGTCCCTTATGCAACACCAAT 57.832 42.857 0.00 0.00 0.00 3.16
2788 3170 3.505386 TGTCCCTTATGCAACACCAATT 58.495 40.909 0.00 0.00 0.00 2.32
2789 3171 4.667573 TGTCCCTTATGCAACACCAATTA 58.332 39.130 0.00 0.00 0.00 1.40
2790 3172 4.704540 TGTCCCTTATGCAACACCAATTAG 59.295 41.667 0.00 0.00 0.00 1.73
2791 3173 4.947388 GTCCCTTATGCAACACCAATTAGA 59.053 41.667 0.00 0.00 0.00 2.10
2792 3174 5.066505 GTCCCTTATGCAACACCAATTAGAG 59.933 44.000 0.00 0.00 0.00 2.43
2793 3175 5.045213 TCCCTTATGCAACACCAATTAGAGA 60.045 40.000 0.00 0.00 0.00 3.10
2794 3176 5.652014 CCCTTATGCAACACCAATTAGAGAA 59.348 40.000 0.00 0.00 0.00 2.87
2795 3177 6.183360 CCCTTATGCAACACCAATTAGAGAAG 60.183 42.308 0.00 0.00 0.00 2.85
2796 3178 6.599244 CCTTATGCAACACCAATTAGAGAAGA 59.401 38.462 0.00 0.00 0.00 2.87
2797 3179 7.201679 CCTTATGCAACACCAATTAGAGAAGAG 60.202 40.741 0.00 0.00 0.00 2.85
2798 3180 5.227569 TGCAACACCAATTAGAGAAGAGA 57.772 39.130 0.00 0.00 0.00 3.10
2799 3181 5.240891 TGCAACACCAATTAGAGAAGAGAG 58.759 41.667 0.00 0.00 0.00 3.20
2800 3182 5.012046 TGCAACACCAATTAGAGAAGAGAGA 59.988 40.000 0.00 0.00 0.00 3.10
2801 3183 5.580297 GCAACACCAATTAGAGAAGAGAGAG 59.420 44.000 0.00 0.00 0.00 3.20
2802 3184 5.930837 ACACCAATTAGAGAAGAGAGAGG 57.069 43.478 0.00 0.00 0.00 3.69
2803 3185 4.714308 ACACCAATTAGAGAAGAGAGAGGG 59.286 45.833 0.00 0.00 0.00 4.30
2804 3186 4.100808 CACCAATTAGAGAAGAGAGAGGGG 59.899 50.000 0.00 0.00 0.00 4.79
2805 3187 4.016105 ACCAATTAGAGAAGAGAGAGGGGA 60.016 45.833 0.00 0.00 0.00 4.81
2806 3188 4.343814 CCAATTAGAGAAGAGAGAGGGGAC 59.656 50.000 0.00 0.00 0.00 4.46
2808 3190 4.957606 TTAGAGAAGAGAGAGGGGACTT 57.042 45.455 0.00 0.00 44.43 3.01
2809 3191 3.845109 AGAGAAGAGAGAGGGGACTTT 57.155 47.619 0.00 0.00 44.43 2.66
2810 3192 4.957606 AGAGAAGAGAGAGGGGACTTTA 57.042 45.455 0.00 0.00 44.43 1.85
2811 3193 4.867086 AGAGAAGAGAGAGGGGACTTTAG 58.133 47.826 0.00 0.00 44.43 1.85
2812 3194 4.293901 AGAGAAGAGAGAGGGGACTTTAGT 59.706 45.833 0.00 0.00 44.43 2.24
2813 3195 4.606210 AGAAGAGAGAGGGGACTTTAGTC 58.394 47.826 1.18 1.18 44.43 2.59
2814 3196 4.044825 AGAAGAGAGAGGGGACTTTAGTCA 59.955 45.833 11.67 0.00 46.47 3.41
2815 3197 3.976015 AGAGAGAGGGGACTTTAGTCAG 58.024 50.000 11.67 0.00 46.47 3.51
2816 3198 3.335484 AGAGAGAGGGGACTTTAGTCAGT 59.665 47.826 11.67 0.00 46.47 3.41
2817 3199 4.540906 AGAGAGAGGGGACTTTAGTCAGTA 59.459 45.833 11.67 0.00 46.47 2.74
2818 3200 5.015391 AGAGAGAGGGGACTTTAGTCAGTAA 59.985 44.000 11.67 0.00 46.47 2.24
2819 3201 5.652324 AGAGAGGGGACTTTAGTCAGTAAA 58.348 41.667 11.67 0.00 46.47 2.01
2820 3202 6.082707 AGAGAGGGGACTTTAGTCAGTAAAA 58.917 40.000 11.67 0.00 46.47 1.52
2821 3203 6.211785 AGAGAGGGGACTTTAGTCAGTAAAAG 59.788 42.308 11.67 0.00 46.47 2.27
2822 3204 5.845065 AGAGGGGACTTTAGTCAGTAAAAGT 59.155 40.000 11.67 0.00 45.99 2.66
2828 3210 5.866207 ACTTTAGTCAGTAAAAGTCAGGGG 58.134 41.667 0.00 0.00 40.96 4.79
2829 3211 5.368816 ACTTTAGTCAGTAAAAGTCAGGGGT 59.631 40.000 0.00 0.00 40.96 4.95
2830 3212 3.771577 AGTCAGTAAAAGTCAGGGGTG 57.228 47.619 0.00 0.00 0.00 4.61
2831 3213 3.046374 AGTCAGTAAAAGTCAGGGGTGT 58.954 45.455 0.00 0.00 0.00 4.16
2832 3214 3.458487 AGTCAGTAAAAGTCAGGGGTGTT 59.542 43.478 0.00 0.00 0.00 3.32
2833 3215 4.079958 AGTCAGTAAAAGTCAGGGGTGTTT 60.080 41.667 0.00 0.00 0.00 2.83
2834 3216 4.036380 GTCAGTAAAAGTCAGGGGTGTTTG 59.964 45.833 0.00 0.00 0.00 2.93
2835 3217 3.317993 CAGTAAAAGTCAGGGGTGTTTGG 59.682 47.826 0.00 0.00 0.00 3.28
2836 3218 2.838637 AAAAGTCAGGGGTGTTTGGA 57.161 45.000 0.00 0.00 0.00 3.53
2837 3219 2.364972 AAAGTCAGGGGTGTTTGGAG 57.635 50.000 0.00 0.00 0.00 3.86
2838 3220 0.478507 AAGTCAGGGGTGTTTGGAGG 59.521 55.000 0.00 0.00 0.00 4.30
2839 3221 0.697854 AGTCAGGGGTGTTTGGAGGT 60.698 55.000 0.00 0.00 0.00 3.85
2840 3222 0.185175 GTCAGGGGTGTTTGGAGGTT 59.815 55.000 0.00 0.00 0.00 3.50
2841 3223 0.930726 TCAGGGGTGTTTGGAGGTTT 59.069 50.000 0.00 0.00 0.00 3.27
2842 3224 2.136863 TCAGGGGTGTTTGGAGGTTTA 58.863 47.619 0.00 0.00 0.00 2.01
2843 3225 2.158579 TCAGGGGTGTTTGGAGGTTTAC 60.159 50.000 0.00 0.00 0.00 2.01
2844 3226 2.141067 AGGGGTGTTTGGAGGTTTACT 58.859 47.619 0.00 0.00 0.00 2.24
2845 3227 2.158519 AGGGGTGTTTGGAGGTTTACTG 60.159 50.000 0.00 0.00 0.00 2.74
2846 3228 2.158579 GGGGTGTTTGGAGGTTTACTGA 60.159 50.000 0.00 0.00 0.00 3.41
2847 3229 2.882761 GGGTGTTTGGAGGTTTACTGAC 59.117 50.000 0.00 0.00 0.00 3.51
2848 3230 3.434596 GGGTGTTTGGAGGTTTACTGACT 60.435 47.826 0.00 0.00 0.00 3.41
2849 3231 4.202388 GGGTGTTTGGAGGTTTACTGACTA 60.202 45.833 0.00 0.00 0.00 2.59
2850 3232 5.370679 GGTGTTTGGAGGTTTACTGACTAA 58.629 41.667 0.00 0.00 0.00 2.24
2851 3233 5.824097 GGTGTTTGGAGGTTTACTGACTAAA 59.176 40.000 0.00 0.00 0.00 1.85
2852 3234 6.017357 GGTGTTTGGAGGTTTACTGACTAAAG 60.017 42.308 0.00 0.00 0.00 1.85
2853 3235 6.017357 GTGTTTGGAGGTTTACTGACTAAAGG 60.017 42.308 0.00 0.00 0.00 3.11
2854 3236 5.899631 TTGGAGGTTTACTGACTAAAGGT 57.100 39.130 0.00 0.00 0.00 3.50
2855 3237 5.223449 TGGAGGTTTACTGACTAAAGGTG 57.777 43.478 0.00 0.00 0.00 4.00
2856 3238 4.903049 TGGAGGTTTACTGACTAAAGGTGA 59.097 41.667 0.00 0.00 0.00 4.02
2857 3239 5.221581 TGGAGGTTTACTGACTAAAGGTGAC 60.222 44.000 0.00 0.00 0.00 3.67
2859 3241 6.210185 GGAGGTTTACTGACTAAAGGTGACTA 59.790 42.308 0.00 0.00 42.68 2.59
2860 3242 6.990798 AGGTTTACTGACTAAAGGTGACTAC 58.009 40.000 0.00 0.00 42.68 2.73
2861 3243 6.781507 AGGTTTACTGACTAAAGGTGACTACT 59.218 38.462 0.00 0.00 42.68 2.57
2862 3244 7.946776 AGGTTTACTGACTAAAGGTGACTACTA 59.053 37.037 0.00 0.00 42.68 1.82
2863 3245 8.026026 GGTTTACTGACTAAAGGTGACTACTAC 58.974 40.741 0.00 0.00 42.68 2.73
2864 3246 8.791675 GTTTACTGACTAAAGGTGACTACTACT 58.208 37.037 0.00 0.00 42.68 2.57
2866 3248 9.664332 TTACTGACTAAAGGTGACTACTACTAG 57.336 37.037 0.00 0.00 42.68 2.57
2867 3249 7.688343 ACTGACTAAAGGTGACTACTACTAGT 58.312 38.462 0.00 0.00 42.68 2.57
2868 3250 7.823799 ACTGACTAAAGGTGACTACTACTAGTC 59.176 40.741 0.00 3.34 46.56 2.59
2869 3251 7.915930 TGACTAAAGGTGACTACTACTAGTCT 58.084 38.462 0.00 0.00 46.53 3.24
2870 3252 8.040132 TGACTAAAGGTGACTACTACTAGTCTC 58.960 40.741 0.00 6.95 46.53 3.36
2871 3253 8.149631 ACTAAAGGTGACTACTACTAGTCTCT 57.850 38.462 0.00 5.95 46.53 3.10
2872 3254 9.265862 ACTAAAGGTGACTACTACTAGTCTCTA 57.734 37.037 0.00 0.00 46.53 2.43
2873 3255 9.754382 CTAAAGGTGACTACTACTAGTCTCTAG 57.246 40.741 0.00 0.00 46.53 2.43
2874 3256 7.738437 AAGGTGACTACTACTAGTCTCTAGT 57.262 40.000 0.00 12.91 46.53 2.57
2875 3257 7.352079 AGGTGACTACTACTAGTCTCTAGTC 57.648 44.000 18.91 18.91 46.53 2.59
2876 3258 6.896860 AGGTGACTACTACTAGTCTCTAGTCA 59.103 42.308 21.95 21.95 46.53 3.41
2877 3259 7.069085 AGGTGACTACTACTAGTCTCTAGTCAG 59.931 44.444 24.28 13.34 46.53 3.51
2878 3260 7.147846 GGTGACTACTACTAGTCTCTAGTCAGT 60.148 44.444 24.28 13.61 46.53 3.41
2879 3261 8.902806 GTGACTACTACTAGTCTCTAGTCAGTA 58.097 40.741 24.28 13.91 46.53 2.74
2880 3262 9.473007 TGACTACTACTAGTCTCTAGTCAGTAA 57.527 37.037 21.95 9.07 46.53 2.24
2887 3269 8.113173 ACTAGTCTCTAGTCAGTAAAAGTTGG 57.887 38.462 3.91 0.00 0.00 3.77
2888 3270 6.347859 AGTCTCTAGTCAGTAAAAGTTGGG 57.652 41.667 0.00 0.00 0.00 4.12
2889 3271 5.246429 AGTCTCTAGTCAGTAAAAGTTGGGG 59.754 44.000 0.00 0.00 0.00 4.96
2890 3272 4.530946 TCTCTAGTCAGTAAAAGTTGGGGG 59.469 45.833 0.00 0.00 0.00 5.40
2891 3273 4.237018 TCTAGTCAGTAAAAGTTGGGGGT 58.763 43.478 0.00 0.00 0.00 4.95
2892 3274 3.223674 AGTCAGTAAAAGTTGGGGGTG 57.776 47.619 0.00 0.00 0.00 4.61
2893 3275 2.158519 AGTCAGTAAAAGTTGGGGGTGG 60.159 50.000 0.00 0.00 0.00 4.61
2894 3276 1.146152 TCAGTAAAAGTTGGGGGTGGG 59.854 52.381 0.00 0.00 0.00 4.61
2895 3277 0.485543 AGTAAAAGTTGGGGGTGGGG 59.514 55.000 0.00 0.00 0.00 4.96
2896 3278 0.189080 GTAAAAGTTGGGGGTGGGGT 59.811 55.000 0.00 0.00 0.00 4.95
2897 3279 0.188834 TAAAAGTTGGGGGTGGGGTG 59.811 55.000 0.00 0.00 0.00 4.61
2898 3280 1.595058 AAAAGTTGGGGGTGGGGTGA 61.595 55.000 0.00 0.00 0.00 4.02
2899 3281 2.306715 AAAGTTGGGGGTGGGGTGAC 62.307 60.000 0.00 0.00 0.00 3.67
2900 3282 3.182996 GTTGGGGGTGGGGTGACT 61.183 66.667 0.00 0.00 0.00 3.41
2901 3283 1.848895 GTTGGGGGTGGGGTGACTA 60.849 63.158 0.00 0.00 0.00 2.59
2902 3284 1.540367 TTGGGGGTGGGGTGACTAG 60.540 63.158 0.00 0.00 0.00 2.57
2903 3285 2.691252 GGGGGTGGGGTGACTAGG 60.691 72.222 0.00 0.00 0.00 3.02
2904 3286 2.691252 GGGGTGGGGTGACTAGGG 60.691 72.222 0.00 0.00 0.00 3.53
2905 3287 2.453054 GGGTGGGGTGACTAGGGA 59.547 66.667 0.00 0.00 0.00 4.20
2906 3288 1.993948 GGGTGGGGTGACTAGGGAC 60.994 68.421 0.00 0.00 0.00 4.46
2907 3289 1.080538 GGTGGGGTGACTAGGGACT 59.919 63.158 0.00 0.00 46.37 3.85
2908 3290 0.337428 GGTGGGGTGACTAGGGACTA 59.663 60.000 0.00 0.00 41.75 2.59
2909 3291 1.273438 GGTGGGGTGACTAGGGACTAA 60.273 57.143 0.00 0.00 42.17 2.24
2910 3292 2.543635 GTGGGGTGACTAGGGACTAAA 58.456 52.381 0.00 0.00 42.17 1.85
2911 3293 2.235650 GTGGGGTGACTAGGGACTAAAC 59.764 54.545 0.00 0.00 42.17 2.01
2912 3294 2.113052 TGGGGTGACTAGGGACTAAACT 59.887 50.000 0.00 0.00 42.17 2.66
2913 3295 3.337605 TGGGGTGACTAGGGACTAAACTA 59.662 47.826 0.00 0.00 42.17 2.24
2914 3296 3.959449 GGGGTGACTAGGGACTAAACTAG 59.041 52.174 0.00 0.00 42.17 2.57
2931 3313 8.983307 CTAAACTAGTTTTAGTCACCCACTAG 57.017 38.462 25.07 8.57 41.30 2.57
2933 3315 6.587206 ACTAGTTTTAGTCACCCACTAGTC 57.413 41.667 4.77 0.00 44.42 2.59
2934 3316 6.073314 ACTAGTTTTAGTCACCCACTAGTCA 58.927 40.000 4.77 0.00 44.42 3.41
2935 3317 5.470047 AGTTTTAGTCACCCACTAGTCAG 57.530 43.478 0.00 0.00 38.90 3.51
2936 3318 4.283722 AGTTTTAGTCACCCACTAGTCAGG 59.716 45.833 6.89 6.89 38.90 3.86
2941 3323 4.561155 CCCACTAGTCAGGGGTGT 57.439 61.111 9.99 0.00 44.87 4.16
2942 3324 2.773458 CCCACTAGTCAGGGGTGTT 58.227 57.895 9.99 0.00 44.87 3.32
2943 3325 1.064825 CCCACTAGTCAGGGGTGTTT 58.935 55.000 9.99 0.00 44.87 2.83
2944 3326 1.271379 CCCACTAGTCAGGGGTGTTTG 60.271 57.143 9.99 0.00 44.87 2.93
2945 3327 1.271379 CCACTAGTCAGGGGTGTTTGG 60.271 57.143 0.00 0.00 40.92 3.28
2946 3328 1.697432 CACTAGTCAGGGGTGTTTGGA 59.303 52.381 0.00 0.00 0.00 3.53
2947 3329 1.978580 ACTAGTCAGGGGTGTTTGGAG 59.021 52.381 0.00 0.00 0.00 3.86
2948 3330 1.279271 CTAGTCAGGGGTGTTTGGAGG 59.721 57.143 0.00 0.00 0.00 4.30
2949 3331 0.697854 AGTCAGGGGTGTTTGGAGGT 60.698 55.000 0.00 0.00 0.00 3.85
2950 3332 0.185175 GTCAGGGGTGTTTGGAGGTT 59.815 55.000 0.00 0.00 0.00 3.50
2951 3333 0.930726 TCAGGGGTGTTTGGAGGTTT 59.069 50.000 0.00 0.00 0.00 3.27
2952 3334 2.136863 TCAGGGGTGTTTGGAGGTTTA 58.863 47.619 0.00 0.00 0.00 2.01
2953 3335 2.158579 TCAGGGGTGTTTGGAGGTTTAC 60.159 50.000 0.00 0.00 0.00 2.01
2954 3336 2.141067 AGGGGTGTTTGGAGGTTTACT 58.859 47.619 0.00 0.00 0.00 2.24
2955 3337 2.158519 AGGGGTGTTTGGAGGTTTACTG 60.159 50.000 0.00 0.00 0.00 2.74
2956 3338 2.158579 GGGGTGTTTGGAGGTTTACTGA 60.159 50.000 0.00 0.00 0.00 3.41
2957 3339 2.882761 GGGTGTTTGGAGGTTTACTGAC 59.117 50.000 0.00 0.00 0.00 3.51
2958 3340 3.434596 GGGTGTTTGGAGGTTTACTGACT 60.435 47.826 0.00 0.00 0.00 3.41
2959 3341 4.202388 GGGTGTTTGGAGGTTTACTGACTA 60.202 45.833 0.00 0.00 0.00 2.59
2960 3342 5.370679 GGTGTTTGGAGGTTTACTGACTAA 58.629 41.667 0.00 0.00 0.00 2.24
2961 3343 5.824097 GGTGTTTGGAGGTTTACTGACTAAA 59.176 40.000 0.00 0.00 0.00 1.85
2962 3344 6.319405 GGTGTTTGGAGGTTTACTGACTAAAA 59.681 38.462 0.00 0.00 0.00 1.52
2963 3345 7.415229 GTGTTTGGAGGTTTACTGACTAAAAG 58.585 38.462 0.00 0.00 0.00 2.27
2964 3346 7.066645 GTGTTTGGAGGTTTACTGACTAAAAGT 59.933 37.037 0.00 0.00 0.00 2.66
2965 3347 7.066525 TGTTTGGAGGTTTACTGACTAAAAGTG 59.933 37.037 0.00 0.00 0.00 3.16
2966 3348 6.488769 TGGAGGTTTACTGACTAAAAGTGA 57.511 37.500 0.00 0.00 0.00 3.41
2967 3349 6.285990 TGGAGGTTTACTGACTAAAAGTGAC 58.714 40.000 0.00 0.00 0.00 3.67
2968 3350 6.099269 TGGAGGTTTACTGACTAAAAGTGACT 59.901 38.462 0.00 0.00 0.00 3.41
2969 3351 7.288389 TGGAGGTTTACTGACTAAAAGTGACTA 59.712 37.037 0.00 0.00 0.00 2.59
2970 3352 7.598118 GGAGGTTTACTGACTAAAAGTGACTAC 59.402 40.741 0.00 0.00 0.00 2.73
2971 3353 8.247666 AGGTTTACTGACTAAAAGTGACTACT 57.752 34.615 0.00 0.00 39.32 2.57
2972 3354 9.359653 AGGTTTACTGACTAAAAGTGACTACTA 57.640 33.333 0.00 0.00 35.69 1.82
2973 3355 9.404348 GGTTTACTGACTAAAAGTGACTACTAC 57.596 37.037 0.00 0.00 35.69 2.73
2978 3360 9.218440 ACTGACTAAAAGTGACTACTACTAGTC 57.782 37.037 0.00 15.20 46.56 2.59
2979 3361 9.439500 CTGACTAAAAGTGACTACTACTAGTCT 57.561 37.037 19.09 0.00 46.53 3.24
2980 3362 9.434420 TGACTAAAAGTGACTACTACTAGTCTC 57.566 37.037 19.09 7.11 46.53 3.36
2985 3367 9.657419 AAAAGTGACTACTACTAGTCTCTAGTC 57.343 37.037 18.91 18.91 46.30 2.59
2986 3368 8.599624 AAGTGACTACTACTAGTCTCTAGTCT 57.400 38.462 22.69 10.55 46.30 3.24
2987 3369 8.230472 AGTGACTACTACTAGTCTCTAGTCTC 57.770 42.308 22.69 20.43 45.67 3.36
2988 3370 8.057623 AGTGACTACTACTAGTCTCTAGTCTCT 58.942 40.741 22.69 21.56 45.67 3.10
2989 3371 9.342308 GTGACTACTACTAGTCTCTAGTCTCTA 57.658 40.741 22.69 10.09 46.53 2.43
2990 3372 9.565090 TGACTACTACTAGTCTCTAGTCTCTAG 57.435 40.741 22.69 10.54 46.53 2.43
2991 3373 9.566432 GACTACTACTAGTCTCTAGTCTCTAGT 57.434 40.741 18.66 18.91 44.02 2.57
2992 3374 9.347240 ACTACTACTAGTCTCTAGTCTCTAGTG 57.653 40.741 21.45 16.54 41.71 2.74
2993 3375 9.565090 CTACTACTAGTCTCTAGTCTCTAGTGA 57.435 40.741 21.45 4.58 41.71 3.41
2997 3379 8.771521 ACTAGTCTCTAGTCTCTAGTGATACA 57.228 38.462 16.30 0.00 40.66 2.29
2998 3380 9.204337 ACTAGTCTCTAGTCTCTAGTGATACAA 57.796 37.037 16.30 0.44 40.66 2.41
3000 3382 8.726870 AGTCTCTAGTCTCTAGTGATACAAAC 57.273 38.462 10.35 0.00 0.00 2.93
3001 3383 8.322828 AGTCTCTAGTCTCTAGTGATACAAACA 58.677 37.037 10.35 0.00 0.00 2.83
3002 3384 8.392612 GTCTCTAGTCTCTAGTGATACAAACAC 58.607 40.741 10.35 0.00 38.38 3.32
3003 3385 7.553402 TCTCTAGTCTCTAGTGATACAAACACC 59.447 40.741 0.00 0.00 38.82 4.16
3004 3386 5.662674 AGTCTCTAGTGATACAAACACCC 57.337 43.478 0.00 0.00 38.82 4.61
3042 3424 5.977129 ACAAAAACTGTTTGCCTAATTCTCG 59.023 36.000 6.53 0.00 32.99 4.04
3119 3509 6.825721 GCTAGCCCAATAATGTAGCATCTTAT 59.174 38.462 2.29 0.00 36.83 1.73
3120 3510 7.987458 GCTAGCCCAATAATGTAGCATCTTATA 59.013 37.037 2.29 0.00 36.83 0.98
3211 3609 1.019673 ATTCTATGTGCCAGCAAGCG 58.980 50.000 0.00 0.00 34.65 4.68
3404 3809 8.467402 ACATACGTAGGTGTACTATATCGTAC 57.533 38.462 12.76 9.94 37.14 3.67
3405 3810 8.307483 ACATACGTAGGTGTACTATATCGTACT 58.693 37.037 12.76 2.24 37.14 2.73
3521 3926 2.355481 AACAAGTCGACGACGGGC 60.355 61.111 21.44 0.00 37.67 6.13
3626 4040 4.424566 GCCACGCCGACGAACCTA 62.425 66.667 0.00 0.00 43.93 3.08
3677 4091 3.041940 CAAGACGACGCCCGCTTT 61.042 61.111 0.00 0.00 43.32 3.51
3732 4146 4.496336 AAGGGCCCGATGAGCAGC 62.496 66.667 18.44 0.00 0.00 5.25
3794 4211 3.190849 CAGTCGCATCGCCACCAG 61.191 66.667 0.00 0.00 0.00 4.00
3800 4217 3.506096 CATCGCCACCAGCAGCAG 61.506 66.667 0.00 0.00 44.04 4.24
3944 4361 3.830178 TCTTCGAGGTGGAGTTCATGTAA 59.170 43.478 0.00 0.00 0.00 2.41
4017 4435 3.196901 AGGTGGTTTGACTGCATATCGTA 59.803 43.478 0.00 0.00 0.00 3.43
4041 4459 0.523072 GTGCGTGCATGAGGTGAAAT 59.477 50.000 10.93 0.00 0.00 2.17
4089 4509 1.072965 GCTGGGCATGGAGTATAGCTT 59.927 52.381 0.00 0.00 0.00 3.74
4091 4511 2.105477 CTGGGCATGGAGTATAGCTTGT 59.895 50.000 0.00 0.00 0.00 3.16
4092 4512 3.313791 TGGGCATGGAGTATAGCTTGTA 58.686 45.455 0.00 0.00 0.00 2.41
4182 4603 7.968956 TGTGTTTTTAATTGTACTTTTCGCAGA 59.031 29.630 0.00 0.00 0.00 4.26
4183 4604 8.800031 GTGTTTTTAATTGTACTTTTCGCAGAA 58.200 29.630 0.00 0.00 45.90 3.02
4184 4605 9.015577 TGTTTTTAATTGTACTTTTCGCAGAAG 57.984 29.630 0.00 0.00 45.90 2.85
4185 4606 7.617533 TTTTAATTGTACTTTTCGCAGAAGC 57.382 32.000 0.00 0.00 45.90 3.86
4186 4607 6.554334 TTAATTGTACTTTTCGCAGAAGCT 57.446 33.333 0.00 0.00 45.90 3.74
4187 4608 3.878086 TTGTACTTTTCGCAGAAGCTG 57.122 42.857 0.00 0.00 45.90 4.24
4188 4609 2.833794 TGTACTTTTCGCAGAAGCTGT 58.166 42.857 0.00 0.00 45.90 4.40
4196 4617 1.897133 TCGCAGAAGCTGTTTACCCTA 59.103 47.619 0.00 0.00 39.10 3.53
4227 4648 9.430399 AATGGGTAATAGTGTATGTACTACTGT 57.570 33.333 0.00 0.00 36.09 3.55
4300 4722 7.345914 ACACTATATGTTAGCCTCCTCTTCTTT 59.654 37.037 0.00 0.00 38.98 2.52
4333 4755 9.840427 CCATGTTTTGTTTCTTTACTAGTATGG 57.160 33.333 2.79 0.43 0.00 2.74
4453 4876 4.043184 TCCCTTCGGTTGGGTTTATAAGTT 59.957 41.667 7.87 0.00 44.84 2.66
4465 4888 7.691213 TGGGTTTATAAGTTGGACATGAGTTA 58.309 34.615 0.00 0.00 0.00 2.24
4466 4889 8.164733 TGGGTTTATAAGTTGGACATGAGTTAA 58.835 33.333 0.00 0.00 0.00 2.01
4612 5036 5.930837 AGTCAAATCAAAGACCCAAAACA 57.069 34.783 0.00 0.00 35.38 2.83
4615 5039 5.050159 GTCAAATCAAAGACCCAAAACATGC 60.050 40.000 0.00 0.00 0.00 4.06
4637 5061 2.282407 CCCGACTAATAAACCCAACCG 58.718 52.381 0.00 0.00 0.00 4.44
4820 5245 2.096496 GCAATCATCTTCACACTTCCCG 59.904 50.000 0.00 0.00 0.00 5.14
4865 5290 7.217200 GTGTTTCAAGTATAGATCCTGCCATA 58.783 38.462 0.00 0.00 0.00 2.74
4867 5292 7.071196 TGTTTCAAGTATAGATCCTGCCATAGT 59.929 37.037 0.00 0.00 0.00 2.12
4868 5293 6.596309 TCAAGTATAGATCCTGCCATAGTG 57.404 41.667 0.00 0.00 0.00 2.74
4869 5294 5.047021 TCAAGTATAGATCCTGCCATAGTGC 60.047 44.000 0.00 0.00 0.00 4.40
4870 5295 3.772025 AGTATAGATCCTGCCATAGTGCC 59.228 47.826 0.00 0.00 0.00 5.01
4872 5297 1.442773 AGATCCTGCCATAGTGCCAT 58.557 50.000 0.00 0.00 0.00 4.40
4873 5298 1.350351 AGATCCTGCCATAGTGCCATC 59.650 52.381 0.00 0.00 0.00 3.51
4875 5300 1.048160 TCCTGCCATAGTGCCATCGA 61.048 55.000 0.00 0.00 0.00 3.59
4876 5301 0.035881 CCTGCCATAGTGCCATCGAT 59.964 55.000 0.00 0.00 0.00 3.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 71 1.689352 CGGCGGTGGATGTCGTTTAC 61.689 60.000 0.00 0.00 0.00 2.01
222 228 0.750850 GGCGGTATGTCTGGCTTCTA 59.249 55.000 0.00 0.00 43.52 2.10
226 232 3.480133 GGGGCGGTATGTCTGGCT 61.480 66.667 0.00 0.00 45.74 4.75
381 388 0.179026 CCGAGGAGGAGATGGTCGTA 60.179 60.000 0.00 0.00 45.00 3.43
419 426 1.202734 CCTCTACATCCGTCGACCCTA 60.203 57.143 10.58 0.00 0.00 3.53
433 440 1.668101 CCCGAGTCCTGCACCTCTAC 61.668 65.000 0.00 0.00 0.00 2.59
535 554 2.030562 CACTCGCCGACCAAACCT 59.969 61.111 0.00 0.00 0.00 3.50
680 703 1.750341 TTCAAACGGGCCTCAGACGA 61.750 55.000 0.84 0.00 0.00 4.20
708 731 4.526262 TCCGGTCACAAAAATTTCATCCAT 59.474 37.500 0.00 0.00 0.00 3.41
714 737 2.033675 ACGGTCCGGTCACAAAAATTTC 59.966 45.455 17.28 0.00 0.00 2.17
764 787 4.886496 AAACTTAACTCCTTAGAGGCGT 57.114 40.909 0.00 0.00 45.11 5.68
772 795 4.417854 ACCCCACCTAAAACTTAACTCCTT 59.582 41.667 0.00 0.00 0.00 3.36
841 881 0.758685 CCGGAGAAGGAGAGAGGCAT 60.759 60.000 0.00 0.00 0.00 4.40
1050 1126 0.034477 CCGGCTCAAAGTTGGGGTAT 60.034 55.000 0.00 0.00 0.00 2.73
1199 1275 0.392193 CTGCTGGAGCTGGTTACTGG 60.392 60.000 0.00 0.00 42.66 4.00
1816 1912 6.990939 ACATGATATGATCAGTGCATATAGCC 59.009 38.462 0.00 0.00 43.53 3.93
1910 2010 0.672342 GGACAATGGGATGCAGATGC 59.328 55.000 0.00 0.00 42.50 3.91
1911 2011 2.061509 TGGACAATGGGATGCAGATG 57.938 50.000 0.00 0.00 0.00 2.90
1912 2012 2.832643 TTGGACAATGGGATGCAGAT 57.167 45.000 0.00 0.00 0.00 2.90
1970 2070 8.233868 CAGAGTATGTTTAGGTATCTGATCGAG 58.766 40.741 0.00 0.00 35.78 4.04
2098 2206 1.474077 GCACATGAAACCTAGCCCAAG 59.526 52.381 0.00 0.00 0.00 3.61
2340 2449 7.449704 ACTTCTTGGACTGATCAAGCTTTAAAT 59.550 33.333 0.00 0.00 40.82 1.40
2425 2764 9.408648 AGTATCCAAACACCCTCTAAAATATTG 57.591 33.333 0.00 0.00 0.00 1.90
2427 2766 9.004231 AGAGTATCCAAACACCCTCTAAAATAT 57.996 33.333 0.00 0.00 33.66 1.28
2435 2817 4.957327 ACTAGAGAGTATCCAAACACCCTC 59.043 45.833 0.00 0.00 32.65 4.30
2436 2818 4.949121 ACTAGAGAGTATCCAAACACCCT 58.051 43.478 0.00 0.00 32.65 4.34
2438 2820 5.916661 TGACTAGAGAGTATCCAAACACC 57.083 43.478 0.00 0.00 35.45 4.16
2439 2821 6.754209 CACATGACTAGAGAGTATCCAAACAC 59.246 42.308 0.00 0.00 35.45 3.32
2440 2822 6.663523 TCACATGACTAGAGAGTATCCAAACA 59.336 38.462 0.00 0.00 35.45 2.83
2441 2823 6.975772 GTCACATGACTAGAGAGTATCCAAAC 59.024 42.308 0.00 0.00 41.65 2.93
2442 2824 7.101652 GTCACATGACTAGAGAGTATCCAAA 57.898 40.000 0.00 0.00 41.65 3.28
2457 2839 4.272991 CGGAGGTAGTACTAGTCACATGAC 59.727 50.000 1.87 3.72 45.08 3.06
2458 2840 4.080695 ACGGAGGTAGTACTAGTCACATGA 60.081 45.833 1.87 0.00 0.00 3.07
2459 2841 4.197750 ACGGAGGTAGTACTAGTCACATG 58.802 47.826 1.87 0.00 0.00 3.21
2460 2842 4.163839 AGACGGAGGTAGTACTAGTCACAT 59.836 45.833 16.96 1.91 33.39 3.21
2461 2843 3.517100 AGACGGAGGTAGTACTAGTCACA 59.483 47.826 16.96 0.00 33.39 3.58
2462 2844 4.119136 GAGACGGAGGTAGTACTAGTCAC 58.881 52.174 16.96 9.98 33.39 3.67
2463 2845 3.181482 CGAGACGGAGGTAGTACTAGTCA 60.181 52.174 16.96 0.00 33.39 3.41
2464 2846 3.380142 CGAGACGGAGGTAGTACTAGTC 58.620 54.545 1.87 6.96 0.00 2.59
2465 2847 3.451141 CGAGACGGAGGTAGTACTAGT 57.549 52.381 1.87 0.00 0.00 2.57
2476 2858 6.238416 GAATGACTTATTCACCGAGACGGAG 61.238 48.000 16.99 9.14 45.73 4.63
2477 2859 4.439700 GAATGACTTATTCACCGAGACGGA 60.440 45.833 16.99 0.00 45.73 4.69
2478 2860 3.797256 GAATGACTTATTCACCGAGACGG 59.203 47.826 8.67 8.67 43.79 4.79
2479 2861 3.482472 CGAATGACTTATTCACCGAGACG 59.518 47.826 0.00 0.00 44.42 4.18
2480 2862 3.243177 GCGAATGACTTATTCACCGAGAC 59.757 47.826 0.00 0.00 44.42 3.36
2481 2863 3.444916 GCGAATGACTTATTCACCGAGA 58.555 45.455 0.00 0.00 44.42 4.04
2482 2864 2.216488 CGCGAATGACTTATTCACCGAG 59.784 50.000 0.00 0.00 44.42 4.63
2483 2865 2.190161 CGCGAATGACTTATTCACCGA 58.810 47.619 0.00 0.00 44.42 4.69
2484 2866 1.924524 ACGCGAATGACTTATTCACCG 59.075 47.619 15.93 0.00 44.42 4.94
2485 2867 4.110482 ACTACGCGAATGACTTATTCACC 58.890 43.478 15.93 0.00 44.42 4.02
2486 2868 5.515626 AGAACTACGCGAATGACTTATTCAC 59.484 40.000 15.93 0.00 44.42 3.18
2487 2869 5.647589 AGAACTACGCGAATGACTTATTCA 58.352 37.500 15.93 0.00 44.42 2.57
2488 2870 6.360148 CCTAGAACTACGCGAATGACTTATTC 59.640 42.308 15.93 3.24 41.46 1.75
2489 2871 6.183360 ACCTAGAACTACGCGAATGACTTATT 60.183 38.462 15.93 0.00 0.00 1.40
2490 2872 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
2491 2873 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
2492 2874 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
2493 2875 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
2494 2876 3.417690 ACCTAGAACTACGCGAATGAC 57.582 47.619 15.93 0.66 0.00 3.06
2495 2877 3.441222 TCAACCTAGAACTACGCGAATGA 59.559 43.478 15.93 0.00 0.00 2.57
2496 2878 3.546670 GTCAACCTAGAACTACGCGAATG 59.453 47.826 15.93 4.47 0.00 2.67
2497 2879 3.730061 CGTCAACCTAGAACTACGCGAAT 60.730 47.826 15.93 0.00 0.00 3.34
2498 2880 2.413239 CGTCAACCTAGAACTACGCGAA 60.413 50.000 15.93 0.00 0.00 4.70
2499 2881 1.129251 CGTCAACCTAGAACTACGCGA 59.871 52.381 15.93 0.00 0.00 5.87
2500 2882 1.129251 TCGTCAACCTAGAACTACGCG 59.871 52.381 3.53 3.53 0.00 6.01
2501 2883 2.907910 TCGTCAACCTAGAACTACGC 57.092 50.000 0.00 0.00 0.00 4.42
2502 2884 7.025963 AGTTAAATCGTCAACCTAGAACTACG 58.974 38.462 0.00 0.00 0.00 3.51
2505 2887 8.968969 AGATAGTTAAATCGTCAACCTAGAACT 58.031 33.333 0.00 0.00 0.00 3.01
2621 3003 9.884636 TCTAGGTCATCGATTTGAGAAATTAAA 57.115 29.630 0.00 0.00 0.00 1.52
2622 3004 9.884636 TTCTAGGTCATCGATTTGAGAAATTAA 57.115 29.630 0.00 0.00 0.00 1.40
2623 3005 9.314321 GTTCTAGGTCATCGATTTGAGAAATTA 57.686 33.333 0.00 0.00 0.00 1.40
2624 3006 8.043710 AGTTCTAGGTCATCGATTTGAGAAATT 58.956 33.333 0.00 0.00 0.00 1.82
2625 3007 7.560368 AGTTCTAGGTCATCGATTTGAGAAAT 58.440 34.615 0.00 0.00 0.00 2.17
2626 3008 6.936279 AGTTCTAGGTCATCGATTTGAGAAA 58.064 36.000 0.00 0.00 0.00 2.52
2627 3009 6.531503 AGTTCTAGGTCATCGATTTGAGAA 57.468 37.500 0.00 0.00 0.00 2.87
2628 3010 6.238402 CGTAGTTCTAGGTCATCGATTTGAGA 60.238 42.308 0.00 0.00 0.00 3.27
2629 3011 5.910166 CGTAGTTCTAGGTCATCGATTTGAG 59.090 44.000 0.00 0.00 0.00 3.02
2630 3012 5.732528 GCGTAGTTCTAGGTCATCGATTTGA 60.733 44.000 0.00 0.00 0.00 2.69
2631 3013 4.441415 GCGTAGTTCTAGGTCATCGATTTG 59.559 45.833 0.00 0.00 0.00 2.32
2632 3014 4.608951 GCGTAGTTCTAGGTCATCGATTT 58.391 43.478 0.00 0.00 0.00 2.17
2633 3015 3.303857 CGCGTAGTTCTAGGTCATCGATT 60.304 47.826 0.00 0.00 0.00 3.34
2634 3016 2.223611 CGCGTAGTTCTAGGTCATCGAT 59.776 50.000 0.00 0.00 0.00 3.59
2635 3017 1.596260 CGCGTAGTTCTAGGTCATCGA 59.404 52.381 0.00 0.00 0.00 3.59
2636 3018 1.596260 TCGCGTAGTTCTAGGTCATCG 59.404 52.381 5.77 0.00 0.00 3.84
2637 3019 3.687572 TTCGCGTAGTTCTAGGTCATC 57.312 47.619 5.77 0.00 0.00 2.92
2638 3020 3.630769 TCATTCGCGTAGTTCTAGGTCAT 59.369 43.478 5.77 0.00 0.00 3.06
2639 3021 3.011818 TCATTCGCGTAGTTCTAGGTCA 58.988 45.455 5.77 0.00 0.00 4.02
2640 3022 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
2641 3023 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
2642 3024 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
2643 3025 6.910972 TGAATAAGTCATTCGCGTAGTTCTAG 59.089 38.462 5.77 0.00 45.25 2.43
2644 3026 6.690098 GTGAATAAGTCATTCGCGTAGTTCTA 59.310 38.462 5.77 0.00 45.25 2.10
2645 3027 5.515626 GTGAATAAGTCATTCGCGTAGTTCT 59.484 40.000 5.77 0.00 45.25 3.01
2646 3028 5.715264 GTGAATAAGTCATTCGCGTAGTTC 58.285 41.667 5.77 0.29 45.25 3.01
2647 3029 5.697848 GTGAATAAGTCATTCGCGTAGTT 57.302 39.130 5.77 2.59 45.25 2.24
2654 3036 4.976731 CCGTCTAGGTGAATAAGTCATTCG 59.023 45.833 0.00 0.00 45.25 3.34
2655 3037 6.145338 TCCGTCTAGGTGAATAAGTCATTC 57.855 41.667 0.00 0.00 40.27 2.67
2656 3038 5.069251 CCTCCGTCTAGGTGAATAAGTCATT 59.931 44.000 0.00 0.00 38.90 2.57
2657 3039 4.585162 CCTCCGTCTAGGTGAATAAGTCAT 59.415 45.833 0.00 0.00 38.90 3.06
2658 3040 3.952323 CCTCCGTCTAGGTGAATAAGTCA 59.048 47.826 0.00 0.00 41.99 3.41
2659 3041 4.571372 CCTCCGTCTAGGTGAATAAGTC 57.429 50.000 0.00 0.00 41.99 3.01
2669 3051 2.172293 ACTACTACCACCTCCGTCTAGG 59.828 54.545 0.00 0.00 42.82 3.02
2670 3052 3.118482 TGACTACTACCACCTCCGTCTAG 60.118 52.174 0.00 0.00 0.00 2.43
2671 3053 2.840038 TGACTACTACCACCTCCGTCTA 59.160 50.000 0.00 0.00 0.00 2.59
2672 3054 1.632409 TGACTACTACCACCTCCGTCT 59.368 52.381 0.00 0.00 0.00 4.18
2673 3055 2.015587 CTGACTACTACCACCTCCGTC 58.984 57.143 0.00 0.00 0.00 4.79
2674 3056 1.632409 TCTGACTACTACCACCTCCGT 59.368 52.381 0.00 0.00 0.00 4.69
2675 3057 2.015587 GTCTGACTACTACCACCTCCG 58.984 57.143 0.00 0.00 0.00 4.63
2676 3058 3.369242 AGTCTGACTACTACCACCTCC 57.631 52.381 8.91 0.00 0.00 4.30
2677 3059 5.356291 TCTAGTCTGACTACTACCACCTC 57.644 47.826 13.34 0.00 0.00 3.85
2678 3060 5.251237 ACTTCTAGTCTGACTACTACCACCT 59.749 44.000 13.34 0.00 0.00 4.00
2679 3061 5.499313 ACTTCTAGTCTGACTACTACCACC 58.501 45.833 13.34 0.00 0.00 4.61
2680 3062 7.451501 AAACTTCTAGTCTGACTACTACCAC 57.548 40.000 13.34 0.00 0.00 4.16
2681 3063 8.474710 AAAAACTTCTAGTCTGACTACTACCA 57.525 34.615 13.34 0.00 0.00 3.25
2685 3067 9.352191 TGACTAAAAACTTCTAGTCTGACTACT 57.648 33.333 13.34 0.00 42.96 2.57
2686 3068 9.615295 CTGACTAAAAACTTCTAGTCTGACTAC 57.385 37.037 13.34 0.68 42.96 2.73
2687 3069 9.570468 TCTGACTAAAAACTTCTAGTCTGACTA 57.430 33.333 16.17 16.17 42.94 2.59
2688 3070 8.466617 TCTGACTAAAAACTTCTAGTCTGACT 57.533 34.615 15.57 15.57 42.94 3.41
2690 3072 7.255871 GGGTCTGACTAAAAACTTCTAGTCTGA 60.256 40.741 7.85 12.18 44.29 3.27
2691 3073 6.869388 GGGTCTGACTAAAAACTTCTAGTCTG 59.131 42.308 7.85 9.33 42.96 3.51
2692 3074 6.783482 AGGGTCTGACTAAAAACTTCTAGTCT 59.217 38.462 7.85 0.00 42.96 3.24
2693 3075 6.869388 CAGGGTCTGACTAAAAACTTCTAGTC 59.131 42.308 7.85 2.91 42.88 2.59
2694 3076 6.326843 ACAGGGTCTGACTAAAAACTTCTAGT 59.673 38.462 7.85 0.00 35.18 2.57
2695 3077 6.760291 ACAGGGTCTGACTAAAAACTTCTAG 58.240 40.000 7.85 0.00 35.18 2.43
2696 3078 6.742559 ACAGGGTCTGACTAAAAACTTCTA 57.257 37.500 7.85 0.00 35.18 2.10
2697 3079 5.632034 ACAGGGTCTGACTAAAAACTTCT 57.368 39.130 7.85 0.00 35.18 2.85
2698 3080 6.459710 CCAAACAGGGTCTGACTAAAAACTTC 60.460 42.308 7.85 0.00 35.18 3.01
2699 3081 5.359860 CCAAACAGGGTCTGACTAAAAACTT 59.640 40.000 7.85 0.00 35.18 2.66
2700 3082 4.887655 CCAAACAGGGTCTGACTAAAAACT 59.112 41.667 7.85 0.00 35.18 2.66
2701 3083 4.885325 TCCAAACAGGGTCTGACTAAAAAC 59.115 41.667 7.85 0.00 38.24 2.43
2702 3084 5.118729 TCCAAACAGGGTCTGACTAAAAA 57.881 39.130 7.85 0.00 38.24 1.94
2703 3085 4.781775 TCCAAACAGGGTCTGACTAAAA 57.218 40.909 7.85 0.00 38.24 1.52
2704 3086 4.445735 CCTTCCAAACAGGGTCTGACTAAA 60.446 45.833 7.85 0.00 38.24 1.85
2705 3087 3.072476 CCTTCCAAACAGGGTCTGACTAA 59.928 47.826 7.85 0.00 38.24 2.24
2706 3088 2.637872 CCTTCCAAACAGGGTCTGACTA 59.362 50.000 7.85 0.00 38.24 2.59
2707 3089 1.421646 CCTTCCAAACAGGGTCTGACT 59.578 52.381 7.85 0.00 38.24 3.41
2708 3090 1.143073 ACCTTCCAAACAGGGTCTGAC 59.857 52.381 0.00 0.00 38.24 3.51
2709 3091 1.142870 CACCTTCCAAACAGGGTCTGA 59.857 52.381 1.59 0.00 38.24 3.27
2710 3092 1.142870 TCACCTTCCAAACAGGGTCTG 59.857 52.381 0.00 0.00 38.24 3.51
2711 3093 1.143073 GTCACCTTCCAAACAGGGTCT 59.857 52.381 0.00 0.00 38.24 3.85
2712 3094 1.143073 AGTCACCTTCCAAACAGGGTC 59.857 52.381 0.00 0.00 38.24 4.46
2713 3095 1.222567 AGTCACCTTCCAAACAGGGT 58.777 50.000 0.00 0.00 38.24 4.34
2714 3096 2.372172 AGTAGTCACCTTCCAAACAGGG 59.628 50.000 0.00 0.00 38.24 4.45
2715 3097 3.771577 AGTAGTCACCTTCCAAACAGG 57.228 47.619 0.00 0.00 37.45 4.00
2716 3098 5.470047 AGTAGTAGTCACCTTCCAAACAG 57.530 43.478 0.00 0.00 0.00 3.16
2717 3099 6.073314 ACTAGTAGTAGTCACCTTCCAAACA 58.927 40.000 0.00 0.00 34.00 2.83
2718 3100 6.587206 ACTAGTAGTAGTCACCTTCCAAAC 57.413 41.667 0.00 0.00 34.00 2.93
2730 3112 7.830201 AGACATTTAGTGCTGACTAGTAGTAGT 59.170 37.037 10.09 10.09 42.59 2.73
2731 3113 8.215926 AGACATTTAGTGCTGACTAGTAGTAG 57.784 38.462 1.88 2.87 36.03 2.57
2732 3114 8.577048 AAGACATTTAGTGCTGACTAGTAGTA 57.423 34.615 1.88 0.00 36.03 1.82
2733 3115 7.469537 AAGACATTTAGTGCTGACTAGTAGT 57.530 36.000 1.37 1.37 36.03 2.73
2734 3116 8.679100 ACTAAGACATTTAGTGCTGACTAGTAG 58.321 37.037 0.00 0.00 36.03 2.57
2735 3117 8.577048 ACTAAGACATTTAGTGCTGACTAGTA 57.423 34.615 0.00 0.00 36.03 1.82
2736 3118 7.469537 ACTAAGACATTTAGTGCTGACTAGT 57.530 36.000 0.00 0.00 36.03 2.57
2752 3134 9.555727 GCATAAGGGACATTTAATACTAAGACA 57.444 33.333 0.00 0.00 0.00 3.41
2753 3135 9.555727 TGCATAAGGGACATTTAATACTAAGAC 57.444 33.333 0.00 0.00 0.00 3.01
2756 3138 9.688091 TGTTGCATAAGGGACATTTAATACTAA 57.312 29.630 0.00 0.00 0.00 2.24
2757 3139 9.116067 GTGTTGCATAAGGGACATTTAATACTA 57.884 33.333 0.00 0.00 0.00 1.82
2758 3140 7.068226 GGTGTTGCATAAGGGACATTTAATACT 59.932 37.037 0.00 0.00 0.00 2.12
2759 3141 7.147983 TGGTGTTGCATAAGGGACATTTAATAC 60.148 37.037 0.00 0.00 0.00 1.89
2760 3142 6.892456 TGGTGTTGCATAAGGGACATTTAATA 59.108 34.615 0.00 0.00 0.00 0.98
2761 3143 5.719085 TGGTGTTGCATAAGGGACATTTAAT 59.281 36.000 0.00 0.00 0.00 1.40
2762 3144 5.080337 TGGTGTTGCATAAGGGACATTTAA 58.920 37.500 0.00 0.00 0.00 1.52
2763 3145 4.667573 TGGTGTTGCATAAGGGACATTTA 58.332 39.130 0.00 0.00 0.00 1.40
2764 3146 3.505386 TGGTGTTGCATAAGGGACATTT 58.495 40.909 0.00 0.00 0.00 2.32
2765 3147 3.168035 TGGTGTTGCATAAGGGACATT 57.832 42.857 0.00 0.00 0.00 2.71
2766 3148 2.897271 TGGTGTTGCATAAGGGACAT 57.103 45.000 0.00 0.00 0.00 3.06
2767 3149 2.666272 TTGGTGTTGCATAAGGGACA 57.334 45.000 0.00 0.00 0.00 4.02
2768 3150 4.947388 TCTAATTGGTGTTGCATAAGGGAC 59.053 41.667 0.00 0.00 0.00 4.46
2769 3151 5.045213 TCTCTAATTGGTGTTGCATAAGGGA 60.045 40.000 0.00 0.00 0.00 4.20
2770 3152 5.192927 TCTCTAATTGGTGTTGCATAAGGG 58.807 41.667 0.00 0.00 0.00 3.95
2771 3153 6.599244 TCTTCTCTAATTGGTGTTGCATAAGG 59.401 38.462 0.00 0.00 0.00 2.69
2772 3154 7.550551 TCTCTTCTCTAATTGGTGTTGCATAAG 59.449 37.037 0.00 0.00 0.00 1.73
2773 3155 7.394016 TCTCTTCTCTAATTGGTGTTGCATAA 58.606 34.615 0.00 0.00 0.00 1.90
2774 3156 6.946340 TCTCTTCTCTAATTGGTGTTGCATA 58.054 36.000 0.00 0.00 0.00 3.14
2775 3157 5.809001 TCTCTTCTCTAATTGGTGTTGCAT 58.191 37.500 0.00 0.00 0.00 3.96
2776 3158 5.012046 TCTCTCTTCTCTAATTGGTGTTGCA 59.988 40.000 0.00 0.00 0.00 4.08
2777 3159 5.482908 TCTCTCTTCTCTAATTGGTGTTGC 58.517 41.667 0.00 0.00 0.00 4.17
2778 3160 6.105333 CCTCTCTCTTCTCTAATTGGTGTTG 58.895 44.000 0.00 0.00 0.00 3.33
2779 3161 5.188751 CCCTCTCTCTTCTCTAATTGGTGTT 59.811 44.000 0.00 0.00 0.00 3.32
2780 3162 4.714308 CCCTCTCTCTTCTCTAATTGGTGT 59.286 45.833 0.00 0.00 0.00 4.16
2781 3163 4.100808 CCCCTCTCTCTTCTCTAATTGGTG 59.899 50.000 0.00 0.00 0.00 4.17
2782 3164 4.016105 TCCCCTCTCTCTTCTCTAATTGGT 60.016 45.833 0.00 0.00 0.00 3.67
2783 3165 4.343814 GTCCCCTCTCTCTTCTCTAATTGG 59.656 50.000 0.00 0.00 0.00 3.16
2784 3166 5.208121 AGTCCCCTCTCTCTTCTCTAATTG 58.792 45.833 0.00 0.00 0.00 2.32
2785 3167 5.481615 AGTCCCCTCTCTCTTCTCTAATT 57.518 43.478 0.00 0.00 0.00 1.40
2786 3168 5.481615 AAGTCCCCTCTCTCTTCTCTAAT 57.518 43.478 0.00 0.00 0.00 1.73
2787 3169 4.957606 AAGTCCCCTCTCTCTTCTCTAA 57.042 45.455 0.00 0.00 0.00 2.10
2788 3170 4.957606 AAAGTCCCCTCTCTCTTCTCTA 57.042 45.455 0.00 0.00 0.00 2.43
2789 3171 3.845109 AAAGTCCCCTCTCTCTTCTCT 57.155 47.619 0.00 0.00 0.00 3.10
2790 3172 4.606210 ACTAAAGTCCCCTCTCTCTTCTC 58.394 47.826 0.00 0.00 0.00 2.87
2791 3173 4.044825 TGACTAAAGTCCCCTCTCTCTTCT 59.955 45.833 7.63 0.00 44.15 2.85
2792 3174 4.345854 TGACTAAAGTCCCCTCTCTCTTC 58.654 47.826 7.63 0.00 44.15 2.87
2793 3175 4.202738 ACTGACTAAAGTCCCCTCTCTCTT 60.203 45.833 7.63 0.00 44.15 2.85
2794 3176 3.335484 ACTGACTAAAGTCCCCTCTCTCT 59.665 47.826 7.63 0.00 44.15 3.10
2795 3177 3.703921 ACTGACTAAAGTCCCCTCTCTC 58.296 50.000 7.63 0.00 44.15 3.20
2796 3178 3.837399 ACTGACTAAAGTCCCCTCTCT 57.163 47.619 7.63 0.00 44.15 3.10
2797 3179 5.997384 TTTACTGACTAAAGTCCCCTCTC 57.003 43.478 7.63 0.00 44.15 3.20
2798 3180 5.845065 ACTTTTACTGACTAAAGTCCCCTCT 59.155 40.000 7.63 0.00 44.15 3.69
2799 3181 6.111669 ACTTTTACTGACTAAAGTCCCCTC 57.888 41.667 7.63 0.00 44.15 4.30
2805 3187 5.368816 ACCCCTGACTTTTACTGACTAAAGT 59.631 40.000 0.00 0.00 44.78 2.66
2806 3188 5.701290 CACCCCTGACTTTTACTGACTAAAG 59.299 44.000 0.00 0.00 37.38 1.85
2807 3189 5.131475 ACACCCCTGACTTTTACTGACTAAA 59.869 40.000 0.00 0.00 0.00 1.85
2808 3190 4.657039 ACACCCCTGACTTTTACTGACTAA 59.343 41.667 0.00 0.00 0.00 2.24
2809 3191 4.228824 ACACCCCTGACTTTTACTGACTA 58.771 43.478 0.00 0.00 0.00 2.59
2810 3192 3.046374 ACACCCCTGACTTTTACTGACT 58.954 45.455 0.00 0.00 0.00 3.41
2811 3193 3.487120 ACACCCCTGACTTTTACTGAC 57.513 47.619 0.00 0.00 0.00 3.51
2812 3194 4.204012 CAAACACCCCTGACTTTTACTGA 58.796 43.478 0.00 0.00 0.00 3.41
2813 3195 3.317993 CCAAACACCCCTGACTTTTACTG 59.682 47.826 0.00 0.00 0.00 2.74
2814 3196 3.203487 TCCAAACACCCCTGACTTTTACT 59.797 43.478 0.00 0.00 0.00 2.24
2815 3197 3.558033 TCCAAACACCCCTGACTTTTAC 58.442 45.455 0.00 0.00 0.00 2.01
2816 3198 3.435890 CCTCCAAACACCCCTGACTTTTA 60.436 47.826 0.00 0.00 0.00 1.52
2817 3199 2.666317 CTCCAAACACCCCTGACTTTT 58.334 47.619 0.00 0.00 0.00 2.27
2818 3200 1.133482 CCTCCAAACACCCCTGACTTT 60.133 52.381 0.00 0.00 0.00 2.66
2819 3201 0.478507 CCTCCAAACACCCCTGACTT 59.521 55.000 0.00 0.00 0.00 3.01
2820 3202 0.697854 ACCTCCAAACACCCCTGACT 60.698 55.000 0.00 0.00 0.00 3.41
2821 3203 0.185175 AACCTCCAAACACCCCTGAC 59.815 55.000 0.00 0.00 0.00 3.51
2822 3204 0.930726 AAACCTCCAAACACCCCTGA 59.069 50.000 0.00 0.00 0.00 3.86
2823 3205 2.158519 AGTAAACCTCCAAACACCCCTG 60.159 50.000 0.00 0.00 0.00 4.45
2824 3206 2.141067 AGTAAACCTCCAAACACCCCT 58.859 47.619 0.00 0.00 0.00 4.79
2825 3207 2.158579 TCAGTAAACCTCCAAACACCCC 60.159 50.000 0.00 0.00 0.00 4.95
2826 3208 2.882761 GTCAGTAAACCTCCAAACACCC 59.117 50.000 0.00 0.00 0.00 4.61
2827 3209 3.816994 AGTCAGTAAACCTCCAAACACC 58.183 45.455 0.00 0.00 0.00 4.16
2828 3210 6.017357 CCTTTAGTCAGTAAACCTCCAAACAC 60.017 42.308 0.00 0.00 0.00 3.32
2829 3211 6.059484 CCTTTAGTCAGTAAACCTCCAAACA 58.941 40.000 0.00 0.00 0.00 2.83
2830 3212 6.017357 CACCTTTAGTCAGTAAACCTCCAAAC 60.017 42.308 0.00 0.00 0.00 2.93
2831 3213 6.059484 CACCTTTAGTCAGTAAACCTCCAAA 58.941 40.000 0.00 0.00 0.00 3.28
2832 3214 5.367352 TCACCTTTAGTCAGTAAACCTCCAA 59.633 40.000 0.00 0.00 0.00 3.53
2833 3215 4.903049 TCACCTTTAGTCAGTAAACCTCCA 59.097 41.667 0.00 0.00 0.00 3.86
2834 3216 5.011840 AGTCACCTTTAGTCAGTAAACCTCC 59.988 44.000 0.00 0.00 0.00 4.30
2835 3217 6.099159 AGTCACCTTTAGTCAGTAAACCTC 57.901 41.667 0.00 0.00 0.00 3.85
2836 3218 6.781507 AGTAGTCACCTTTAGTCAGTAAACCT 59.218 38.462 0.00 0.00 0.00 3.50
2837 3219 6.990798 AGTAGTCACCTTTAGTCAGTAAACC 58.009 40.000 0.00 0.00 0.00 3.27
2838 3220 8.791675 AGTAGTAGTCACCTTTAGTCAGTAAAC 58.208 37.037 0.00 0.00 0.00 2.01
2839 3221 8.930846 AGTAGTAGTCACCTTTAGTCAGTAAA 57.069 34.615 0.00 0.00 0.00 2.01
2840 3222 9.664332 CTAGTAGTAGTCACCTTTAGTCAGTAA 57.336 37.037 0.00 0.00 0.00 2.24
2841 3223 8.820831 ACTAGTAGTAGTCACCTTTAGTCAGTA 58.179 37.037 0.00 0.00 34.00 2.74
2842 3224 7.688343 ACTAGTAGTAGTCACCTTTAGTCAGT 58.312 38.462 0.00 0.00 34.00 3.41
2861 3243 9.228949 CCAACTTTTACTGACTAGAGACTAGTA 57.771 37.037 10.76 0.00 0.00 1.82
2862 3244 7.177041 CCCAACTTTTACTGACTAGAGACTAGT 59.823 40.741 10.61 10.61 0.00 2.57
2863 3245 7.363094 CCCCAACTTTTACTGACTAGAGACTAG 60.363 44.444 0.00 0.00 0.00 2.57
2864 3246 6.436532 CCCCAACTTTTACTGACTAGAGACTA 59.563 42.308 0.00 0.00 0.00 2.59
2865 3247 5.246429 CCCCAACTTTTACTGACTAGAGACT 59.754 44.000 0.00 0.00 0.00 3.24
2866 3248 5.480205 CCCCAACTTTTACTGACTAGAGAC 58.520 45.833 0.00 0.00 0.00 3.36
2867 3249 4.530946 CCCCCAACTTTTACTGACTAGAGA 59.469 45.833 0.00 0.00 0.00 3.10
2868 3250 4.286291 ACCCCCAACTTTTACTGACTAGAG 59.714 45.833 0.00 0.00 0.00 2.43
2869 3251 4.041198 CACCCCCAACTTTTACTGACTAGA 59.959 45.833 0.00 0.00 0.00 2.43
2870 3252 4.324267 CACCCCCAACTTTTACTGACTAG 58.676 47.826 0.00 0.00 0.00 2.57
2871 3253 3.073356 CCACCCCCAACTTTTACTGACTA 59.927 47.826 0.00 0.00 0.00 2.59
2872 3254 2.158519 CCACCCCCAACTTTTACTGACT 60.159 50.000 0.00 0.00 0.00 3.41
2873 3255 2.235891 CCACCCCCAACTTTTACTGAC 58.764 52.381 0.00 0.00 0.00 3.51
2874 3256 1.146152 CCCACCCCCAACTTTTACTGA 59.854 52.381 0.00 0.00 0.00 3.41
2875 3257 1.627864 CCCACCCCCAACTTTTACTG 58.372 55.000 0.00 0.00 0.00 2.74
2876 3258 0.485543 CCCCACCCCCAACTTTTACT 59.514 55.000 0.00 0.00 0.00 2.24
2877 3259 0.189080 ACCCCACCCCCAACTTTTAC 59.811 55.000 0.00 0.00 0.00 2.01
2878 3260 0.188834 CACCCCACCCCCAACTTTTA 59.811 55.000 0.00 0.00 0.00 1.52
2879 3261 1.074850 CACCCCACCCCCAACTTTT 60.075 57.895 0.00 0.00 0.00 2.27
2880 3262 2.015726 TCACCCCACCCCCAACTTT 61.016 57.895 0.00 0.00 0.00 2.66
2881 3263 2.370403 TCACCCCACCCCCAACTT 60.370 61.111 0.00 0.00 0.00 2.66
2882 3264 2.349630 TAGTCACCCCACCCCCAACT 62.350 60.000 0.00 0.00 0.00 3.16
2883 3265 1.848886 CTAGTCACCCCACCCCCAAC 61.849 65.000 0.00 0.00 0.00 3.77
2884 3266 1.540367 CTAGTCACCCCACCCCCAA 60.540 63.158 0.00 0.00 0.00 4.12
2885 3267 2.124085 CTAGTCACCCCACCCCCA 59.876 66.667 0.00 0.00 0.00 4.96
2886 3268 2.691252 CCTAGTCACCCCACCCCC 60.691 72.222 0.00 0.00 0.00 5.40
2887 3269 2.691252 CCCTAGTCACCCCACCCC 60.691 72.222 0.00 0.00 0.00 4.95
2888 3270 1.993948 GTCCCTAGTCACCCCACCC 60.994 68.421 0.00 0.00 0.00 4.61
2889 3271 0.337428 TAGTCCCTAGTCACCCCACC 59.663 60.000 0.00 0.00 0.00 4.61
2890 3272 2.235650 GTTTAGTCCCTAGTCACCCCAC 59.764 54.545 0.00 0.00 0.00 4.61
2891 3273 2.113052 AGTTTAGTCCCTAGTCACCCCA 59.887 50.000 0.00 0.00 0.00 4.96
2892 3274 2.830293 AGTTTAGTCCCTAGTCACCCC 58.170 52.381 0.00 0.00 0.00 4.95
2893 3275 4.608269 ACTAGTTTAGTCCCTAGTCACCC 58.392 47.826 0.00 0.00 39.69 4.61
2894 3276 6.602410 AAACTAGTTTAGTCCCTAGTCACC 57.398 41.667 19.26 0.00 42.26 4.02
2911 3293 6.350277 CCTGACTAGTGGGTGACTAAAACTAG 60.350 46.154 0.00 6.61 43.80 2.57
2912 3294 5.479375 CCTGACTAGTGGGTGACTAAAACTA 59.521 44.000 0.00 0.00 36.69 2.24
2913 3295 4.283722 CCTGACTAGTGGGTGACTAAAACT 59.716 45.833 0.00 0.00 36.69 2.66
2914 3296 4.562963 CCCTGACTAGTGGGTGACTAAAAC 60.563 50.000 9.70 0.00 36.69 2.43
2915 3297 3.581332 CCCTGACTAGTGGGTGACTAAAA 59.419 47.826 9.70 0.00 36.69 1.52
2916 3298 3.170717 CCCTGACTAGTGGGTGACTAAA 58.829 50.000 9.70 0.00 36.69 1.85
2917 3299 2.559026 CCCCTGACTAGTGGGTGACTAA 60.559 54.545 15.41 0.00 41.82 2.24
2918 3300 1.006758 CCCCTGACTAGTGGGTGACTA 59.993 57.143 15.41 0.00 41.82 2.59
2919 3301 0.252284 CCCCTGACTAGTGGGTGACT 60.252 60.000 15.41 0.00 41.82 3.41
2920 3302 0.544595 ACCCCTGACTAGTGGGTGAC 60.545 60.000 19.14 0.00 42.53 3.67
2921 3303 1.865845 ACCCCTGACTAGTGGGTGA 59.134 57.895 19.14 0.00 42.53 4.02
2922 3304 4.561155 ACCCCTGACTAGTGGGTG 57.439 61.111 19.14 11.75 42.53 4.61
2923 3305 0.104620 AACACCCCTGACTAGTGGGT 60.105 55.000 15.16 15.16 43.97 4.51
2924 3306 1.064825 AAACACCCCTGACTAGTGGG 58.935 55.000 13.94 13.94 42.98 4.61
2925 3307 1.271379 CCAAACACCCCTGACTAGTGG 60.271 57.143 0.00 0.00 35.79 4.00
2926 3308 1.697432 TCCAAACACCCCTGACTAGTG 59.303 52.381 0.00 0.00 37.53 2.74
2927 3309 1.978580 CTCCAAACACCCCTGACTAGT 59.021 52.381 0.00 0.00 0.00 2.57
2928 3310 1.279271 CCTCCAAACACCCCTGACTAG 59.721 57.143 0.00 0.00 0.00 2.57
2929 3311 1.358152 CCTCCAAACACCCCTGACTA 58.642 55.000 0.00 0.00 0.00 2.59
2930 3312 0.697854 ACCTCCAAACACCCCTGACT 60.698 55.000 0.00 0.00 0.00 3.41
2931 3313 0.185175 AACCTCCAAACACCCCTGAC 59.815 55.000 0.00 0.00 0.00 3.51
2932 3314 0.930726 AAACCTCCAAACACCCCTGA 59.069 50.000 0.00 0.00 0.00 3.86
2933 3315 2.158519 AGTAAACCTCCAAACACCCCTG 60.159 50.000 0.00 0.00 0.00 4.45
2934 3316 2.141067 AGTAAACCTCCAAACACCCCT 58.859 47.619 0.00 0.00 0.00 4.79
2935 3317 2.158579 TCAGTAAACCTCCAAACACCCC 60.159 50.000 0.00 0.00 0.00 4.95
2936 3318 2.882761 GTCAGTAAACCTCCAAACACCC 59.117 50.000 0.00 0.00 0.00 4.61
2937 3319 3.816994 AGTCAGTAAACCTCCAAACACC 58.183 45.455 0.00 0.00 0.00 4.16
2938 3320 6.930667 TTTAGTCAGTAAACCTCCAAACAC 57.069 37.500 0.00 0.00 0.00 3.32
2939 3321 7.066525 CACTTTTAGTCAGTAAACCTCCAAACA 59.933 37.037 0.00 0.00 29.89 2.83
2940 3322 7.281549 TCACTTTTAGTCAGTAAACCTCCAAAC 59.718 37.037 0.00 0.00 29.89 2.93
2941 3323 7.281549 GTCACTTTTAGTCAGTAAACCTCCAAA 59.718 37.037 0.00 0.00 29.89 3.28
2942 3324 6.764560 GTCACTTTTAGTCAGTAAACCTCCAA 59.235 38.462 0.00 0.00 29.89 3.53
2943 3325 6.099269 AGTCACTTTTAGTCAGTAAACCTCCA 59.901 38.462 0.00 0.00 29.89 3.86
2944 3326 6.522946 AGTCACTTTTAGTCAGTAAACCTCC 58.477 40.000 0.00 0.00 29.89 4.30
2945 3327 8.358895 AGTAGTCACTTTTAGTCAGTAAACCTC 58.641 37.037 0.00 0.00 29.89 3.85
2946 3328 8.247666 AGTAGTCACTTTTAGTCAGTAAACCT 57.752 34.615 0.00 0.00 29.89 3.50
2947 3329 9.404348 GTAGTAGTCACTTTTAGTCAGTAAACC 57.596 37.037 0.00 0.00 36.14 3.27
2966 3348 9.347240 CACTAGAGACTAGAGACTAGTAGTAGT 57.653 40.741 10.09 10.09 42.02 2.73
2967 3349 9.565090 TCACTAGAGACTAGAGACTAGTAGTAG 57.435 40.741 18.70 2.87 42.02 2.57
2971 3353 9.865152 TGTATCACTAGAGACTAGAGACTAGTA 57.135 37.037 18.70 12.15 42.02 1.82
2972 3354 8.771521 TGTATCACTAGAGACTAGAGACTAGT 57.228 38.462 10.61 10.61 43.85 2.57
2974 3356 9.820725 GTTTGTATCACTAGAGACTAGAGACTA 57.179 37.037 11.94 0.00 36.92 2.59
2975 3357 8.322828 TGTTTGTATCACTAGAGACTAGAGACT 58.677 37.037 11.94 0.00 36.92 3.24
2976 3358 8.392612 GTGTTTGTATCACTAGAGACTAGAGAC 58.607 40.741 11.94 0.82 36.92 3.36
2977 3359 7.553402 GGTGTTTGTATCACTAGAGACTAGAGA 59.447 40.741 11.94 9.84 36.92 3.10
2978 3360 7.201750 GGGTGTTTGTATCACTAGAGACTAGAG 60.202 44.444 11.94 5.12 36.92 2.43
2979 3361 6.602406 GGGTGTTTGTATCACTAGAGACTAGA 59.398 42.308 11.94 0.00 36.92 2.43
2980 3362 6.603997 AGGGTGTTTGTATCACTAGAGACTAG 59.396 42.308 0.00 0.00 36.92 2.57
2981 3363 6.491383 AGGGTGTTTGTATCACTAGAGACTA 58.509 40.000 0.00 0.00 36.92 2.59
2982 3364 5.334421 AGGGTGTTTGTATCACTAGAGACT 58.666 41.667 0.00 0.00 36.92 3.24
2983 3365 5.662674 AGGGTGTTTGTATCACTAGAGAC 57.337 43.478 0.00 0.00 36.53 3.36
2984 3366 6.681729 AAAGGGTGTTTGTATCACTAGAGA 57.318 37.500 0.00 0.00 36.25 3.10
2985 3367 8.311836 TCTTAAAGGGTGTTTGTATCACTAGAG 58.688 37.037 0.00 0.00 36.25 2.43
2986 3368 8.197592 TCTTAAAGGGTGTTTGTATCACTAGA 57.802 34.615 0.00 0.00 36.25 2.43
2987 3369 8.718734 GTTCTTAAAGGGTGTTTGTATCACTAG 58.281 37.037 0.00 0.00 36.25 2.57
2988 3370 8.212312 TGTTCTTAAAGGGTGTTTGTATCACTA 58.788 33.333 0.00 0.00 36.25 2.74
2989 3371 7.057894 TGTTCTTAAAGGGTGTTTGTATCACT 58.942 34.615 0.00 0.00 36.25 3.41
2990 3372 7.266922 TGTTCTTAAAGGGTGTTTGTATCAC 57.733 36.000 0.00 0.00 35.36 3.06
2991 3373 7.339721 TGTTGTTCTTAAAGGGTGTTTGTATCA 59.660 33.333 0.00 0.00 0.00 2.15
2992 3374 7.708998 TGTTGTTCTTAAAGGGTGTTTGTATC 58.291 34.615 0.00 0.00 0.00 2.24
2993 3375 7.648039 TGTTGTTCTTAAAGGGTGTTTGTAT 57.352 32.000 0.00 0.00 0.00 2.29
2994 3376 7.039923 TGTTGTTGTTCTTAAAGGGTGTTTGTA 60.040 33.333 0.00 0.00 0.00 2.41
2995 3377 5.986501 TGTTGTTCTTAAAGGGTGTTTGT 57.013 34.783 0.00 0.00 0.00 2.83
2996 3378 6.159988 TGTTGTTGTTCTTAAAGGGTGTTTG 58.840 36.000 0.00 0.00 0.00 2.93
2997 3379 6.347859 TGTTGTTGTTCTTAAAGGGTGTTT 57.652 33.333 0.00 0.00 0.00 2.83
2998 3380 5.986501 TGTTGTTGTTCTTAAAGGGTGTT 57.013 34.783 0.00 0.00 0.00 3.32
2999 3381 5.986501 TTGTTGTTGTTCTTAAAGGGTGT 57.013 34.783 0.00 0.00 0.00 4.16
3000 3382 7.386573 AGTTTTTGTTGTTGTTCTTAAAGGGTG 59.613 33.333 0.00 0.00 0.00 4.61
3001 3383 7.386573 CAGTTTTTGTTGTTGTTCTTAAAGGGT 59.613 33.333 0.00 0.00 0.00 4.34
3002 3384 7.386573 ACAGTTTTTGTTGTTGTTCTTAAAGGG 59.613 33.333 0.00 0.00 36.31 3.95
3003 3385 8.305441 ACAGTTTTTGTTGTTGTTCTTAAAGG 57.695 30.769 0.00 0.00 36.31 3.11
3042 3424 7.992180 AGATTTATGAAAATTGCGGACAATC 57.008 32.000 0.00 0.00 45.90 2.67
3211 3609 0.301388 ACCGAACGTTGTAACAACGC 59.699 50.000 22.08 11.53 46.58 4.84
3307 3708 5.495640 AGCAGTACTCCTAGTAGTTACGTT 58.504 41.667 0.00 0.00 32.28 3.99
3398 3803 7.437748 ACCGTCTAGTGTATAGTAAGTACGAT 58.562 38.462 0.00 0.00 0.00 3.73
3399 3804 6.806751 ACCGTCTAGTGTATAGTAAGTACGA 58.193 40.000 0.00 0.00 0.00 3.43
3400 3805 7.327275 CCTACCGTCTAGTGTATAGTAAGTACG 59.673 44.444 0.00 0.00 0.00 3.67
3401 3806 8.145122 ACCTACCGTCTAGTGTATAGTAAGTAC 58.855 40.741 0.00 0.00 0.00 2.73
3402 3807 8.144478 CACCTACCGTCTAGTGTATAGTAAGTA 58.856 40.741 0.00 0.00 0.00 2.24
3403 3808 6.989169 CACCTACCGTCTAGTGTATAGTAAGT 59.011 42.308 0.00 0.00 0.00 2.24
3404 3809 6.073331 GCACCTACCGTCTAGTGTATAGTAAG 60.073 46.154 0.00 0.00 32.75 2.34
3405 3810 5.760253 GCACCTACCGTCTAGTGTATAGTAA 59.240 44.000 0.00 0.00 32.75 2.24
3732 4146 2.901813 CTGCTGCTCCTCCTCCTG 59.098 66.667 0.00 0.00 0.00 3.86
3926 4343 3.551890 CGAATTACATGAACTCCACCTCG 59.448 47.826 0.00 0.00 0.00 4.63
4017 4435 1.968017 CCTCATGCACGCACACCTT 60.968 57.895 0.00 0.00 0.00 3.50
4025 4443 4.944962 TTTCTATTTCACCTCATGCACG 57.055 40.909 0.00 0.00 0.00 5.34
4041 4459 3.552684 GCATGCAACCAGCTTGTTTTCTA 60.553 43.478 14.21 0.00 46.82 2.10
4178 4599 5.183228 TGTAATAGGGTAAACAGCTTCTGC 58.817 41.667 0.00 0.00 34.37 4.26
4182 4603 5.891551 CCCATTGTAATAGGGTAAACAGCTT 59.108 40.000 0.00 0.00 37.81 3.74
4183 4604 5.445964 CCCATTGTAATAGGGTAAACAGCT 58.554 41.667 0.00 0.00 37.81 4.24
4184 4605 5.767816 CCCATTGTAATAGGGTAAACAGC 57.232 43.478 0.00 0.00 37.81 4.40
4300 4722 8.637986 AGTAAAGAAACAAAACATGGCTTATCA 58.362 29.630 0.00 0.00 0.00 2.15
4333 4755 7.538678 CCTCAACAAGTTTGCAATAACATACTC 59.461 37.037 0.00 0.00 31.69 2.59
4335 4757 7.367285 TCCTCAACAAGTTTGCAATAACATAC 58.633 34.615 0.00 0.00 0.00 2.39
4520 4943 7.176690 ACGGTATTTGACAAAGAATCCAAAGAT 59.823 33.333 6.77 0.00 32.87 2.40
4521 4944 6.488683 ACGGTATTTGACAAAGAATCCAAAGA 59.511 34.615 6.77 0.00 32.87 2.52
4522 4945 6.582295 CACGGTATTTGACAAAGAATCCAAAG 59.418 38.462 6.77 0.00 32.87 2.77
4523 4946 6.039941 ACACGGTATTTGACAAAGAATCCAAA 59.960 34.615 6.77 0.00 33.72 3.28
4532 4955 5.366460 TGGTTAGACACGGTATTTGACAAA 58.634 37.500 2.48 2.48 0.00 2.83
4534 4957 4.603989 TGGTTAGACACGGTATTTGACA 57.396 40.909 0.00 0.00 0.00 3.58
4543 4966 7.913297 CCACAAAAATTATATGGTTAGACACGG 59.087 37.037 0.00 0.00 0.00 4.94
4544 4967 7.431084 GCCACAAAAATTATATGGTTAGACACG 59.569 37.037 0.00 0.00 32.71 4.49
4612 5036 2.240160 TGGGTTTATTAGTCGGGTGCAT 59.760 45.455 0.00 0.00 0.00 3.96
4615 5039 3.011818 GGTTGGGTTTATTAGTCGGGTG 58.988 50.000 0.00 0.00 0.00 4.61
4637 5061 9.368674 GACTTCTTTGTACTAAATAACTCCTCC 57.631 37.037 0.00 0.00 0.00 4.30
4701 5126 9.502091 AACAATAGAACTTAGAATGCACAAGTA 57.498 29.630 0.00 0.00 32.35 2.24
4702 5127 7.986085 ACAATAGAACTTAGAATGCACAAGT 57.014 32.000 0.00 0.00 34.03 3.16
4820 5245 1.363744 CACGAGGTCCTTGCTTCATC 58.636 55.000 5.98 0.00 0.00 2.92
4865 5290 6.002082 TGTACAGTACTATATCGATGGCACT 58.998 40.000 8.54 1.86 0.00 4.40
4867 5292 7.393515 AGAATGTACAGTACTATATCGATGGCA 59.606 37.037 8.54 0.00 0.00 4.92
4868 5293 7.763356 AGAATGTACAGTACTATATCGATGGC 58.237 38.462 8.54 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.