Multiple sequence alignment - TraesCS6B01G180200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G180200 chr6B 100.000 3850 0 0 1 3850 200317897 200314048 0.000000e+00 7110.0
1 TraesCS6B01G180200 chr6B 93.103 435 19 4 1 425 625783704 625783271 9.080000e-176 627.0
2 TraesCS6B01G180200 chr6B 87.472 447 36 8 1 427 404369055 404368609 7.430000e-137 497.0
3 TraesCS6B01G180200 chr6D 96.857 3023 67 17 839 3850 111442055 111439050 0.000000e+00 5031.0
4 TraesCS6B01G180200 chr6D 93.814 97 5 1 714 809 111443395 111443299 1.110000e-30 145.0
5 TraesCS6B01G180200 chr6D 94.444 36 2 0 3058 3093 111439806 111439771 5.370000e-04 56.5
6 TraesCS6B01G180200 chr6A 94.859 2159 84 14 841 2988 136947058 136949200 0.000000e+00 3347.0
7 TraesCS6B01G180200 chr6A 93.738 543 31 2 3308 3850 136991005 136991544 0.000000e+00 811.0
8 TraesCS6B01G180200 chr6A 85.906 447 39 14 1 424 5052296 5051851 4.530000e-124 455.0
9 TraesCS6B01G180200 chr6A 94.631 149 7 1 709 856 136946890 136947038 2.990000e-56 230.0
10 TraesCS6B01G180200 chr3D 93.981 432 17 2 1 424 180453947 180453517 0.000000e+00 645.0
11 TraesCS6B01G180200 chr3D 92.824 432 23 2 1 424 162252429 162252860 1.520000e-173 619.0
12 TraesCS6B01G180200 chr3D 92.575 431 24 1 1 423 182333915 182334345 2.540000e-171 612.0
13 TraesCS6B01G180200 chr3D 97.143 35 1 0 3263 3297 308588020 308588054 4.150000e-05 60.2
14 TraesCS6B01G180200 chr4D 93.750 432 19 1 1 424 260489834 260490265 3.240000e-180 641.0
15 TraesCS6B01G180200 chr4D 93.039 431 22 1 1 423 509064960 509064530 1.170000e-174 623.0
16 TraesCS6B01G180200 chr4D 97.143 35 1 0 3263 3297 123476904 123476870 4.150000e-05 60.2
17 TraesCS6B01G180200 chr4D 97.143 35 1 0 3263 3297 450990591 450990625 4.150000e-05 60.2
18 TraesCS6B01G180200 chr4D 97.143 35 1 0 3263 3297 451011303 451011269 4.150000e-05 60.2
19 TraesCS6B01G180200 chr1D 93.750 432 19 1 1 424 331293842 331294273 3.240000e-180 641.0
20 TraesCS6B01G180200 chr1D 93.287 432 21 1 1 424 250948300 250948731 7.020000e-177 630.0
21 TraesCS6B01G180200 chr7D 93.056 432 22 2 1 424 593552914 593552483 3.270000e-175 625.0
22 TraesCS6B01G180200 chr2D 92.841 433 22 2 1 425 556337527 556337958 1.520000e-173 619.0
23 TraesCS6B01G180200 chr2D 97.143 35 1 0 3263 3297 635005652 635005618 4.150000e-05 60.2
24 TraesCS6B01G180200 chr2B 88.276 435 40 5 1 424 44441221 44441655 9.540000e-141 510.0
25 TraesCS6B01G180200 chr2B 86.353 447 38 12 1 424 148186650 148187096 2.090000e-127 466.0
26 TraesCS6B01G180200 chr7B 85.809 451 39 12 1 427 648684506 648684057 4.530000e-124 455.0
27 TraesCS6B01G180200 chr4B 95.475 221 10 0 467 687 168192265 168192045 1.700000e-93 353.0
28 TraesCS6B01G180200 chr3A 86.643 277 23 3 425 687 729179643 729179367 1.050000e-75 294.0
29 TraesCS6B01G180200 chrUn 97.143 35 1 0 3263 3297 237093949 237093983 4.150000e-05 60.2
30 TraesCS6B01G180200 chr5D 97.143 35 1 0 3263 3297 464500448 464500482 4.150000e-05 60.2
31 TraesCS6B01G180200 chr5D 97.143 35 1 0 3263 3297 464527878 464527912 4.150000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G180200 chr6B 200314048 200317897 3849 True 7110.000000 7110 100.000000 1 3850 1 chr6B.!!$R1 3849
1 TraesCS6B01G180200 chr6D 111439050 111443395 4345 True 1744.166667 5031 95.038333 714 3850 3 chr6D.!!$R1 3136
2 TraesCS6B01G180200 chr6A 136946890 136949200 2310 False 1788.500000 3347 94.745000 709 2988 2 chr6A.!!$F2 2279
3 TraesCS6B01G180200 chr6A 136991005 136991544 539 False 811.000000 811 93.738000 3308 3850 1 chr6A.!!$F1 542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
319 320 0.030235 GTTTGGGGAAACTGCACGAC 59.970 55.0 0.00 0.00 0.0 4.34 F
701 702 0.035439 TTTGATCCTGTCCGGCTTCC 60.035 55.0 0.00 0.00 0.0 3.46 F
1021 2246 0.104487 CCTCTCTCAGTGCATGCGAT 59.896 55.0 14.09 0.04 0.0 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1769 2998 0.108424 CTTGGAGCTCGTTGGAGAGG 60.108 60.000 7.83 0.0 43.27 3.69 R
1838 3067 2.268022 GAGGAAGTCGAGGACTGCA 58.732 57.895 6.12 0.0 42.59 4.41 R
2975 4205 1.194781 ACCGACAATGCCTCCTCTGT 61.195 55.000 0.00 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 3.214123 CGTAGGTCGCCGATCCCA 61.214 66.667 0.00 0.00 0.00 4.37
46 47 2.561956 CGTAGGTCGCCGATCCCAT 61.562 63.158 0.00 0.00 0.00 4.00
47 48 1.289380 GTAGGTCGCCGATCCCATC 59.711 63.158 0.00 0.00 0.00 3.51
48 49 1.906824 TAGGTCGCCGATCCCATCC 60.907 63.158 0.00 0.00 0.00 3.51
49 50 2.650226 TAGGTCGCCGATCCCATCCA 62.650 60.000 0.00 0.00 0.00 3.41
50 51 2.029666 GTCGCCGATCCCATCCAG 59.970 66.667 0.00 0.00 0.00 3.86
51 52 3.233980 TCGCCGATCCCATCCAGG 61.234 66.667 0.00 0.00 37.03 4.45
60 61 3.402681 CCATCCAGGGACCAGCGT 61.403 66.667 0.00 0.00 0.00 5.07
61 62 2.063979 CCATCCAGGGACCAGCGTA 61.064 63.158 0.00 0.00 0.00 4.42
62 63 1.144057 CATCCAGGGACCAGCGTAC 59.856 63.158 0.00 0.00 0.00 3.67
63 64 2.423898 ATCCAGGGACCAGCGTACG 61.424 63.158 11.84 11.84 0.00 3.67
64 65 2.849096 ATCCAGGGACCAGCGTACGA 62.849 60.000 21.65 0.00 0.00 3.43
65 66 2.642254 CCAGGGACCAGCGTACGAA 61.642 63.158 21.65 0.00 0.00 3.85
66 67 1.153823 CAGGGACCAGCGTACGAAG 60.154 63.158 21.65 10.01 0.00 3.79
67 68 2.183555 GGGACCAGCGTACGAAGG 59.816 66.667 21.65 20.99 0.00 3.46
68 69 2.345760 GGGACCAGCGTACGAAGGA 61.346 63.158 26.58 0.00 0.00 3.36
69 70 1.673808 GGGACCAGCGTACGAAGGAT 61.674 60.000 26.58 14.35 0.00 3.24
70 71 0.248949 GGACCAGCGTACGAAGGATC 60.249 60.000 26.58 19.73 0.00 3.36
71 72 0.739561 GACCAGCGTACGAAGGATCT 59.260 55.000 26.58 8.90 0.00 2.75
72 73 0.739561 ACCAGCGTACGAAGGATCTC 59.260 55.000 26.58 5.43 0.00 2.75
73 74 0.030908 CCAGCGTACGAAGGATCTCC 59.969 60.000 21.65 0.00 0.00 3.71
74 75 0.030908 CAGCGTACGAAGGATCTCCC 59.969 60.000 21.65 0.00 36.42 4.30
75 76 1.008767 GCGTACGAAGGATCTCCCG 60.009 63.158 21.65 0.00 40.87 5.14
76 77 1.653115 CGTACGAAGGATCTCCCGG 59.347 63.158 10.44 0.00 40.87 5.73
77 78 1.793134 CGTACGAAGGATCTCCCGGG 61.793 65.000 16.85 16.85 40.87 5.73
78 79 0.466922 GTACGAAGGATCTCCCGGGA 60.467 60.000 25.06 25.06 40.87 5.14
79 80 0.466922 TACGAAGGATCTCCCGGGAC 60.467 60.000 22.63 10.58 40.87 4.46
80 81 2.499827 CGAAGGATCTCCCGGGACC 61.500 68.421 22.63 20.44 40.87 4.46
81 82 2.444140 AAGGATCTCCCGGGACCG 60.444 66.667 22.63 11.95 40.87 4.79
125 126 2.818132 GGTGGCTGATCCGAGGAG 59.182 66.667 0.00 0.00 37.80 3.69
126 127 2.801631 GGTGGCTGATCCGAGGAGG 61.802 68.421 0.00 0.00 42.97 4.30
127 128 3.157252 TGGCTGATCCGAGGAGGC 61.157 66.667 0.00 2.41 40.77 4.70
128 129 4.292178 GGCTGATCCGAGGAGGCG 62.292 72.222 0.00 0.00 40.77 5.52
129 130 4.959596 GCTGATCCGAGGAGGCGC 62.960 72.222 0.00 0.00 40.77 6.53
130 131 4.292178 CTGATCCGAGGAGGCGCC 62.292 72.222 21.89 21.89 40.77 6.53
137 138 4.554036 GAGGAGGCGCCCACCATC 62.554 72.222 32.20 23.91 36.71 3.51
140 141 4.899239 GAGGCGCCCACCATCGAG 62.899 72.222 26.15 0.00 0.00 4.04
144 145 3.461773 CGCCCACCATCGAGGACT 61.462 66.667 0.00 0.00 41.22 3.85
145 146 2.187946 GCCCACCATCGAGGACTG 59.812 66.667 0.00 0.00 41.22 3.51
146 147 2.903357 CCCACCATCGAGGACTGG 59.097 66.667 0.00 0.00 41.22 4.00
147 148 2.187946 CCACCATCGAGGACTGGC 59.812 66.667 0.00 0.00 41.22 4.85
148 149 2.187946 CACCATCGAGGACTGGCC 59.812 66.667 0.00 0.00 41.22 5.36
149 150 3.461773 ACCATCGAGGACTGGCCG 61.462 66.667 0.00 0.00 43.43 6.13
150 151 4.227134 CCATCGAGGACTGGCCGG 62.227 72.222 11.02 11.02 43.43 6.13
151 152 3.461773 CATCGAGGACTGGCCGGT 61.462 66.667 19.82 19.82 43.43 5.28
152 153 3.461773 ATCGAGGACTGGCCGGTG 61.462 66.667 25.51 7.83 43.43 4.94
153 154 4.988716 TCGAGGACTGGCCGGTGT 62.989 66.667 25.51 9.26 43.43 4.16
154 155 2.849096 ATCGAGGACTGGCCGGTGTA 62.849 60.000 25.51 2.47 43.43 2.90
155 156 2.893398 GAGGACTGGCCGGTGTAG 59.107 66.667 25.51 3.07 43.43 2.74
156 157 1.681327 GAGGACTGGCCGGTGTAGA 60.681 63.158 25.51 0.00 43.43 2.59
157 158 1.946475 GAGGACTGGCCGGTGTAGAC 61.946 65.000 25.51 6.91 43.43 2.59
158 159 2.577593 GACTGGCCGGTGTAGACC 59.422 66.667 25.51 1.73 39.14 3.85
167 168 2.190756 GGTGTAGACCGAGACCAGG 58.809 63.158 0.00 0.00 32.95 4.45
168 169 1.321074 GGTGTAGACCGAGACCAGGG 61.321 65.000 0.00 0.00 32.95 4.45
169 170 1.000019 TGTAGACCGAGACCAGGGG 60.000 63.158 0.00 0.00 0.00 4.79
170 171 1.757340 GTAGACCGAGACCAGGGGG 60.757 68.421 0.00 0.00 41.29 5.40
171 172 3.674050 TAGACCGAGACCAGGGGGC 62.674 68.421 0.00 0.00 37.90 5.80
183 184 4.404098 GGGGGCGCGAGGAAAGAA 62.404 66.667 12.10 0.00 0.00 2.52
184 185 2.359478 GGGGCGCGAGGAAAGAAA 60.359 61.111 12.10 0.00 0.00 2.52
185 186 2.687805 GGGGCGCGAGGAAAGAAAC 61.688 63.158 12.10 0.00 0.00 2.78
186 187 2.474712 GGCGCGAGGAAAGAAACG 59.525 61.111 12.10 0.00 0.00 3.60
187 188 2.474712 GCGCGAGGAAAGAAACGG 59.525 61.111 12.10 0.00 0.00 4.44
188 189 2.474712 CGCGAGGAAAGAAACGGC 59.525 61.111 0.00 0.00 0.00 5.68
189 190 2.474712 GCGAGGAAAGAAACGGCG 59.525 61.111 4.80 4.80 0.00 6.46
190 191 2.025418 GCGAGGAAAGAAACGGCGA 61.025 57.895 16.62 0.00 0.00 5.54
191 192 1.359459 GCGAGGAAAGAAACGGCGAT 61.359 55.000 16.62 0.00 0.00 4.58
192 193 0.370273 CGAGGAAAGAAACGGCGATG 59.630 55.000 16.62 0.00 0.00 3.84
193 194 0.097150 GAGGAAAGAAACGGCGATGC 59.903 55.000 16.62 0.00 0.00 3.91
194 195 0.605319 AGGAAAGAAACGGCGATGCA 60.605 50.000 16.62 0.00 0.00 3.96
195 196 0.179189 GGAAAGAAACGGCGATGCAG 60.179 55.000 16.62 0.00 0.00 4.41
196 197 0.179189 GAAAGAAACGGCGATGCAGG 60.179 55.000 16.62 0.00 0.00 4.85
197 198 2.200170 AAAGAAACGGCGATGCAGGC 62.200 55.000 16.62 4.03 0.00 4.85
244 245 3.823330 GACGGAGGTCGGTGCGAT 61.823 66.667 1.70 0.00 44.45 4.58
245 246 3.753070 GACGGAGGTCGGTGCGATC 62.753 68.421 1.70 0.00 44.45 3.69
246 247 4.907034 CGGAGGTCGGTGCGATCG 62.907 72.222 11.69 11.69 42.32 3.69
270 271 4.680237 CGGCGGCAGTGGAAGACA 62.680 66.667 10.53 0.00 0.00 3.41
271 272 2.045926 GGCGGCAGTGGAAGACAT 60.046 61.111 3.07 0.00 0.00 3.06
272 273 1.220749 GGCGGCAGTGGAAGACATA 59.779 57.895 3.07 0.00 0.00 2.29
273 274 0.179045 GGCGGCAGTGGAAGACATAT 60.179 55.000 3.07 0.00 0.00 1.78
274 275 0.940126 GCGGCAGTGGAAGACATATG 59.060 55.000 0.00 0.00 0.00 1.78
275 276 1.473257 GCGGCAGTGGAAGACATATGA 60.473 52.381 10.38 0.00 0.00 2.15
276 277 2.477825 CGGCAGTGGAAGACATATGAG 58.522 52.381 10.38 0.00 0.00 2.90
277 278 2.804572 CGGCAGTGGAAGACATATGAGG 60.805 54.545 10.38 0.00 0.00 3.86
278 279 2.171448 GGCAGTGGAAGACATATGAGGT 59.829 50.000 10.38 0.00 0.00 3.85
279 280 3.370953 GGCAGTGGAAGACATATGAGGTT 60.371 47.826 10.38 0.00 0.00 3.50
280 281 3.624861 GCAGTGGAAGACATATGAGGTTG 59.375 47.826 10.38 0.00 0.00 3.77
281 282 4.623886 GCAGTGGAAGACATATGAGGTTGA 60.624 45.833 10.38 0.00 0.00 3.18
282 283 5.678583 CAGTGGAAGACATATGAGGTTGAT 58.321 41.667 10.38 0.00 0.00 2.57
283 284 6.686378 GCAGTGGAAGACATATGAGGTTGATA 60.686 42.308 10.38 0.00 0.00 2.15
284 285 6.703607 CAGTGGAAGACATATGAGGTTGATAC 59.296 42.308 10.38 0.00 0.00 2.24
285 286 5.992217 GTGGAAGACATATGAGGTTGATACC 59.008 44.000 10.38 0.00 45.39 2.73
300 301 6.289064 GGTTGATACCATGTAAGACTTAGGG 58.711 44.000 0.00 0.99 44.36 3.53
301 302 6.126854 GGTTGATACCATGTAAGACTTAGGGT 60.127 42.308 14.32 14.32 44.36 4.34
302 303 7.336396 GTTGATACCATGTAAGACTTAGGGTT 58.664 38.462 14.85 6.70 0.00 4.11
303 304 7.504926 TGATACCATGTAAGACTTAGGGTTT 57.495 36.000 14.85 9.54 0.00 3.27
304 305 7.335627 TGATACCATGTAAGACTTAGGGTTTG 58.664 38.462 14.85 2.34 0.00 2.93
305 306 4.918588 ACCATGTAAGACTTAGGGTTTGG 58.081 43.478 7.14 7.08 0.00 3.28
306 307 4.263771 ACCATGTAAGACTTAGGGTTTGGG 60.264 45.833 7.14 0.00 0.00 4.12
307 308 4.270008 CATGTAAGACTTAGGGTTTGGGG 58.730 47.826 0.00 0.00 0.00 4.96
308 309 3.600433 TGTAAGACTTAGGGTTTGGGGA 58.400 45.455 0.00 0.00 0.00 4.81
309 310 3.982052 TGTAAGACTTAGGGTTTGGGGAA 59.018 43.478 0.00 0.00 0.00 3.97
310 311 4.416179 TGTAAGACTTAGGGTTTGGGGAAA 59.584 41.667 0.00 0.00 0.00 3.13
311 312 3.520691 AGACTTAGGGTTTGGGGAAAC 57.479 47.619 0.00 0.00 0.00 2.78
312 313 3.061369 AGACTTAGGGTTTGGGGAAACT 58.939 45.455 0.00 0.00 33.37 2.66
313 314 3.154710 GACTTAGGGTTTGGGGAAACTG 58.845 50.000 0.00 0.00 33.37 3.16
314 315 1.893137 CTTAGGGTTTGGGGAAACTGC 59.107 52.381 0.00 0.00 33.37 4.40
315 316 0.854218 TAGGGTTTGGGGAAACTGCA 59.146 50.000 0.00 0.00 33.37 4.41
316 317 0.759060 AGGGTTTGGGGAAACTGCAC 60.759 55.000 0.00 0.00 33.37 4.57
317 318 1.362355 GGTTTGGGGAAACTGCACG 59.638 57.895 0.00 0.00 33.37 5.34
318 319 1.104577 GGTTTGGGGAAACTGCACGA 61.105 55.000 0.00 0.00 33.37 4.35
319 320 0.030235 GTTTGGGGAAACTGCACGAC 59.970 55.000 0.00 0.00 0.00 4.34
320 321 0.394488 TTTGGGGAAACTGCACGACA 60.394 50.000 0.00 0.00 0.00 4.35
321 322 1.098712 TTGGGGAAACTGCACGACAC 61.099 55.000 0.00 0.00 0.00 3.67
322 323 2.258726 GGGGAAACTGCACGACACC 61.259 63.158 0.00 0.00 0.00 4.16
323 324 2.258726 GGGAAACTGCACGACACCC 61.259 63.158 0.00 0.00 0.00 4.61
324 325 2.604174 GGAAACTGCACGACACCCG 61.604 63.158 0.00 0.00 45.44 5.28
342 343 3.622166 CCGTTAAGGGTGTGGTTATCT 57.378 47.619 6.02 0.00 35.97 1.98
343 344 3.528532 CCGTTAAGGGTGTGGTTATCTC 58.471 50.000 6.02 0.00 35.97 2.75
344 345 3.055675 CCGTTAAGGGTGTGGTTATCTCA 60.056 47.826 6.02 0.00 35.97 3.27
345 346 4.383770 CCGTTAAGGGTGTGGTTATCTCAT 60.384 45.833 6.02 0.00 35.97 2.90
346 347 5.163385 CCGTTAAGGGTGTGGTTATCTCATA 60.163 44.000 6.02 0.00 35.97 2.15
347 348 6.463897 CCGTTAAGGGTGTGGTTATCTCATAT 60.464 42.308 6.02 0.00 35.97 1.78
348 349 7.256048 CCGTTAAGGGTGTGGTTATCTCATATA 60.256 40.741 6.02 0.00 35.97 0.86
349 350 8.311836 CGTTAAGGGTGTGGTTATCTCATATAT 58.688 37.037 0.00 0.00 0.00 0.86
366 367 9.488762 TCTCATATATATAAGGGGTACACCAAG 57.511 37.037 18.57 0.00 42.91 3.61
367 368 9.488762 CTCATATATATAAGGGGTACACCAAGA 57.511 37.037 18.57 0.97 42.91 3.02
370 371 9.799223 ATATATATAAGGGGTACACCAAGATGT 57.201 33.333 18.57 7.70 42.91 3.06
439 440 7.986085 AGTCTAACATCAAGTACAATTGCTT 57.014 32.000 5.05 0.00 0.00 3.91
440 441 8.034058 AGTCTAACATCAAGTACAATTGCTTC 57.966 34.615 5.05 0.00 0.00 3.86
441 442 7.661437 AGTCTAACATCAAGTACAATTGCTTCA 59.339 33.333 5.05 0.00 0.00 3.02
442 443 8.454106 GTCTAACATCAAGTACAATTGCTTCAT 58.546 33.333 5.05 0.00 0.00 2.57
443 444 9.665719 TCTAACATCAAGTACAATTGCTTCATA 57.334 29.630 5.05 0.00 0.00 2.15
459 460 4.764172 CTTCATAAGCAGCAGAAGTACCT 58.236 43.478 0.00 0.00 34.32 3.08
460 461 4.128925 TCATAAGCAGCAGAAGTACCTG 57.871 45.455 0.00 0.00 37.23 4.00
461 462 3.769300 TCATAAGCAGCAGAAGTACCTGA 59.231 43.478 3.57 0.00 36.29 3.86
462 463 2.464157 AAGCAGCAGAAGTACCTGAC 57.536 50.000 3.57 0.00 36.29 3.51
463 464 1.638529 AGCAGCAGAAGTACCTGACT 58.361 50.000 3.57 0.00 41.56 3.41
477 478 7.964604 AGTACCTGACTTTCATTTTACAGTC 57.035 36.000 0.00 0.00 33.13 3.51
478 479 6.935208 AGTACCTGACTTTCATTTTACAGTCC 59.065 38.462 0.00 0.00 33.13 3.85
479 480 4.755123 ACCTGACTTTCATTTTACAGTCCG 59.245 41.667 0.00 0.00 35.71 4.79
480 481 4.994852 CCTGACTTTCATTTTACAGTCCGA 59.005 41.667 0.00 0.00 35.71 4.55
481 482 5.120830 CCTGACTTTCATTTTACAGTCCGAG 59.879 44.000 0.00 0.00 35.71 4.63
482 483 4.994852 TGACTTTCATTTTACAGTCCGAGG 59.005 41.667 0.00 0.00 35.71 4.63
483 484 3.751698 ACTTTCATTTTACAGTCCGAGGC 59.248 43.478 0.00 0.00 0.00 4.70
484 485 2.004583 TCATTTTACAGTCCGAGGCG 57.995 50.000 0.00 0.00 0.00 5.52
485 486 1.546923 TCATTTTACAGTCCGAGGCGA 59.453 47.619 0.00 0.00 0.00 5.54
486 487 2.167693 TCATTTTACAGTCCGAGGCGAT 59.832 45.455 0.00 0.00 0.00 4.58
487 488 2.754946 TTTTACAGTCCGAGGCGATT 57.245 45.000 0.00 0.00 0.00 3.34
488 489 2.004583 TTTACAGTCCGAGGCGATTG 57.995 50.000 0.00 0.00 0.00 2.67
489 490 0.459585 TTACAGTCCGAGGCGATTGC 60.460 55.000 0.00 0.00 41.71 3.56
490 491 1.600511 TACAGTCCGAGGCGATTGCA 61.601 55.000 7.38 0.00 45.35 4.08
491 492 1.741401 CAGTCCGAGGCGATTGCAA 60.741 57.895 7.38 0.00 45.35 4.08
492 493 1.091771 CAGTCCGAGGCGATTGCAAT 61.092 55.000 12.83 12.83 45.35 3.56
493 494 1.091771 AGTCCGAGGCGATTGCAATG 61.092 55.000 18.59 10.36 45.35 2.82
494 495 1.078497 TCCGAGGCGATTGCAATGT 60.078 52.632 18.59 0.00 45.35 2.71
495 496 1.089481 TCCGAGGCGATTGCAATGTC 61.089 55.000 18.59 10.79 45.35 3.06
496 497 1.353103 CGAGGCGATTGCAATGTCC 59.647 57.895 18.59 16.59 45.35 4.02
497 498 1.091771 CGAGGCGATTGCAATGTCCT 61.092 55.000 22.35 22.35 45.35 3.85
498 499 0.379669 GAGGCGATTGCAATGTCCTG 59.620 55.000 25.51 9.77 45.35 3.86
499 500 1.226773 GGCGATTGCAATGTCCTGC 60.227 57.895 18.59 11.97 45.35 4.85
507 508 2.838386 GCAATGTCCTGCACATACAG 57.162 50.000 0.00 0.00 45.77 2.74
508 509 2.358957 GCAATGTCCTGCACATACAGA 58.641 47.619 0.00 0.00 45.77 3.41
509 510 2.947652 GCAATGTCCTGCACATACAGAT 59.052 45.455 0.00 0.00 45.77 2.90
510 511 3.003068 GCAATGTCCTGCACATACAGATC 59.997 47.826 0.00 0.00 45.77 2.75
511 512 4.449131 CAATGTCCTGCACATACAGATCT 58.551 43.478 0.00 0.00 45.77 2.75
512 513 4.767578 ATGTCCTGCACATACAGATCTT 57.232 40.909 0.00 0.00 44.56 2.40
513 514 4.128925 TGTCCTGCACATACAGATCTTC 57.871 45.455 0.00 0.00 40.25 2.87
514 515 3.515104 TGTCCTGCACATACAGATCTTCA 59.485 43.478 0.00 0.00 40.25 3.02
515 516 4.118410 GTCCTGCACATACAGATCTTCAG 58.882 47.826 0.00 0.00 40.25 3.02
516 517 4.026052 TCCTGCACATACAGATCTTCAGA 58.974 43.478 0.00 0.00 40.25 3.27
517 518 4.099113 TCCTGCACATACAGATCTTCAGAG 59.901 45.833 0.00 0.00 40.25 3.35
518 519 4.099113 CCTGCACATACAGATCTTCAGAGA 59.901 45.833 0.00 0.00 40.25 3.10
519 520 5.259832 TGCACATACAGATCTTCAGAGAG 57.740 43.478 0.00 0.00 34.85 3.20
520 521 4.099113 TGCACATACAGATCTTCAGAGAGG 59.901 45.833 0.00 0.00 34.85 3.69
521 522 4.501229 GCACATACAGATCTTCAGAGAGGG 60.501 50.000 0.00 0.00 34.85 4.30
522 523 4.648762 CACATACAGATCTTCAGAGAGGGT 59.351 45.833 0.00 0.00 34.85 4.34
523 524 4.892934 ACATACAGATCTTCAGAGAGGGTC 59.107 45.833 0.00 0.00 34.85 4.46
524 525 3.464720 ACAGATCTTCAGAGAGGGTCA 57.535 47.619 0.00 0.00 34.85 4.02
525 526 3.992999 ACAGATCTTCAGAGAGGGTCAT 58.007 45.455 0.00 0.00 34.85 3.06
526 527 3.960102 ACAGATCTTCAGAGAGGGTCATC 59.040 47.826 0.00 0.00 34.85 2.92
527 528 3.004629 CAGATCTTCAGAGAGGGTCATCG 59.995 52.174 0.00 0.00 34.85 3.84
528 529 1.107114 TCTTCAGAGAGGGTCATCGC 58.893 55.000 0.00 0.00 0.00 4.58
529 530 1.110442 CTTCAGAGAGGGTCATCGCT 58.890 55.000 0.00 0.00 39.56 4.93
530 531 1.480137 CTTCAGAGAGGGTCATCGCTT 59.520 52.381 0.00 0.00 36.98 4.68
531 532 1.107114 TCAGAGAGGGTCATCGCTTC 58.893 55.000 0.00 0.00 36.98 3.86
532 533 0.103937 CAGAGAGGGTCATCGCTTCC 59.896 60.000 0.00 0.00 36.98 3.46
533 534 1.045911 AGAGAGGGTCATCGCTTCCC 61.046 60.000 0.00 0.00 41.36 3.97
534 535 2.107141 GAGGGTCATCGCTTCCCG 59.893 66.667 0.00 0.00 45.27 5.14
535 536 2.683933 AGGGTCATCGCTTCCCGT 60.684 61.111 0.00 0.00 45.27 5.28
536 537 1.380785 AGGGTCATCGCTTCCCGTA 60.381 57.895 0.00 0.00 45.27 4.02
537 538 0.759436 AGGGTCATCGCTTCCCGTAT 60.759 55.000 0.00 0.00 45.27 3.06
538 539 0.319641 GGGTCATCGCTTCCCGTATC 60.320 60.000 0.00 0.00 38.35 2.24
539 540 0.663568 GGTCATCGCTTCCCGTATCG 60.664 60.000 0.00 0.00 38.35 2.92
540 541 1.007734 TCATCGCTTCCCGTATCGC 60.008 57.895 0.00 0.00 38.35 4.58
541 542 2.022129 CATCGCTTCCCGTATCGCC 61.022 63.158 0.00 0.00 38.35 5.54
542 543 2.495409 ATCGCTTCCCGTATCGCCA 61.495 57.895 0.00 0.00 38.35 5.69
543 544 2.421877 ATCGCTTCCCGTATCGCCAG 62.422 60.000 0.00 0.00 38.35 4.85
544 545 2.499685 GCTTCCCGTATCGCCAGT 59.500 61.111 0.00 0.00 0.00 4.00
545 546 1.883084 GCTTCCCGTATCGCCAGTG 60.883 63.158 0.00 0.00 0.00 3.66
546 547 1.883084 CTTCCCGTATCGCCAGTGC 60.883 63.158 0.00 0.00 0.00 4.40
547 548 2.298158 CTTCCCGTATCGCCAGTGCT 62.298 60.000 0.00 0.00 34.43 4.40
548 549 1.895020 TTCCCGTATCGCCAGTGCTT 61.895 55.000 0.00 0.00 34.43 3.91
549 550 1.883084 CCCGTATCGCCAGTGCTTC 60.883 63.158 0.00 0.00 34.43 3.86
550 551 1.141881 CCGTATCGCCAGTGCTTCT 59.858 57.895 0.00 0.00 34.43 2.85
551 552 0.384309 CCGTATCGCCAGTGCTTCTA 59.616 55.000 0.00 0.00 34.43 2.10
552 553 1.600663 CCGTATCGCCAGTGCTTCTAG 60.601 57.143 0.00 0.00 34.43 2.43
553 554 1.492720 GTATCGCCAGTGCTTCTAGC 58.507 55.000 0.00 0.00 42.82 3.42
562 563 3.300013 GCTTCTAGCACTCCCGGT 58.700 61.111 0.00 0.00 41.89 5.28
563 564 1.597461 GCTTCTAGCACTCCCGGTT 59.403 57.895 0.00 0.00 41.89 4.44
564 565 0.460459 GCTTCTAGCACTCCCGGTTC 60.460 60.000 0.00 0.00 41.89 3.62
565 566 0.895530 CTTCTAGCACTCCCGGTTCA 59.104 55.000 0.00 0.00 0.00 3.18
566 567 1.482593 CTTCTAGCACTCCCGGTTCAT 59.517 52.381 0.00 0.00 0.00 2.57
567 568 1.112113 TCTAGCACTCCCGGTTCATC 58.888 55.000 0.00 0.00 0.00 2.92
568 569 0.105039 CTAGCACTCCCGGTTCATCC 59.895 60.000 0.00 0.00 0.00 3.51
569 570 0.616395 TAGCACTCCCGGTTCATCCA 60.616 55.000 0.00 0.00 35.57 3.41
570 571 1.224592 GCACTCCCGGTTCATCCAT 59.775 57.895 0.00 0.00 35.57 3.41
571 572 0.468226 GCACTCCCGGTTCATCCATA 59.532 55.000 0.00 0.00 35.57 2.74
572 573 1.072331 GCACTCCCGGTTCATCCATAT 59.928 52.381 0.00 0.00 35.57 1.78
573 574 2.487265 GCACTCCCGGTTCATCCATATT 60.487 50.000 0.00 0.00 35.57 1.28
574 575 3.141398 CACTCCCGGTTCATCCATATTG 58.859 50.000 0.00 0.00 35.57 1.90
575 576 2.106511 ACTCCCGGTTCATCCATATTGG 59.893 50.000 0.00 0.00 39.43 3.16
576 577 1.202879 TCCCGGTTCATCCATATTGGC 60.203 52.381 0.00 0.00 37.47 4.52
577 578 1.202927 CCCGGTTCATCCATATTGGCT 60.203 52.381 0.00 0.00 37.47 4.75
578 579 2.039746 CCCGGTTCATCCATATTGGCTA 59.960 50.000 0.00 0.00 37.47 3.93
579 580 3.497763 CCCGGTTCATCCATATTGGCTAA 60.498 47.826 0.00 0.00 37.47 3.09
580 581 4.141287 CCGGTTCATCCATATTGGCTAAA 58.859 43.478 0.00 0.00 37.47 1.85
581 582 4.582656 CCGGTTCATCCATATTGGCTAAAA 59.417 41.667 0.00 0.00 37.47 1.52
582 583 5.243730 CCGGTTCATCCATATTGGCTAAAAT 59.756 40.000 0.00 0.00 37.47 1.82
583 584 6.239289 CCGGTTCATCCATATTGGCTAAAATT 60.239 38.462 0.00 0.00 37.47 1.82
584 585 7.040062 CCGGTTCATCCATATTGGCTAAAATTA 60.040 37.037 0.00 0.00 37.47 1.40
585 586 8.356657 CGGTTCATCCATATTGGCTAAAATTAA 58.643 33.333 0.00 0.00 37.47 1.40
586 587 9.476202 GGTTCATCCATATTGGCTAAAATTAAC 57.524 33.333 0.00 0.00 37.47 2.01
589 590 9.420118 TCATCCATATTGGCTAAAATTAACACT 57.580 29.630 0.00 0.00 37.47 3.55
590 591 9.467258 CATCCATATTGGCTAAAATTAACACTG 57.533 33.333 0.00 0.00 37.47 3.66
591 592 8.815565 TCCATATTGGCTAAAATTAACACTGA 57.184 30.769 0.00 0.00 37.47 3.41
592 593 9.249053 TCCATATTGGCTAAAATTAACACTGAA 57.751 29.630 0.00 0.00 37.47 3.02
593 594 9.520204 CCATATTGGCTAAAATTAACACTGAAG 57.480 33.333 0.00 0.00 0.00 3.02
594 595 9.023967 CATATTGGCTAAAATTAACACTGAAGC 57.976 33.333 0.00 0.00 0.00 3.86
595 596 6.648879 TTGGCTAAAATTAACACTGAAGCT 57.351 33.333 0.00 0.00 0.00 3.74
596 597 6.254281 TGGCTAAAATTAACACTGAAGCTC 57.746 37.500 0.00 0.00 0.00 4.09
597 598 5.183140 TGGCTAAAATTAACACTGAAGCTCC 59.817 40.000 0.00 0.00 0.00 4.70
598 599 5.393135 GGCTAAAATTAACACTGAAGCTCCC 60.393 44.000 0.00 0.00 0.00 4.30
599 600 5.416013 GCTAAAATTAACACTGAAGCTCCCT 59.584 40.000 0.00 0.00 0.00 4.20
600 601 5.712152 AAAATTAACACTGAAGCTCCCTG 57.288 39.130 0.00 0.00 0.00 4.45
601 602 2.859165 TTAACACTGAAGCTCCCTGG 57.141 50.000 0.00 0.00 0.00 4.45
602 603 2.024176 TAACACTGAAGCTCCCTGGA 57.976 50.000 0.00 0.00 0.00 3.86
603 604 1.140312 AACACTGAAGCTCCCTGGAA 58.860 50.000 0.00 0.00 0.00 3.53
604 605 1.140312 ACACTGAAGCTCCCTGGAAA 58.860 50.000 0.00 0.00 0.00 3.13
605 606 1.072965 ACACTGAAGCTCCCTGGAAAG 59.927 52.381 0.00 0.00 0.00 2.62
606 607 0.037447 ACTGAAGCTCCCTGGAAAGC 59.963 55.000 11.68 11.68 38.84 3.51
609 610 3.409384 AGCTCCCTGGAAAGCTCC 58.591 61.111 15.26 0.00 45.57 4.70
610 611 1.229788 AGCTCCCTGGAAAGCTCCT 60.230 57.895 15.26 0.00 45.57 3.69
611 612 0.043334 AGCTCCCTGGAAAGCTCCTA 59.957 55.000 15.26 0.00 45.57 2.94
612 613 0.912486 GCTCCCTGGAAAGCTCCTAA 59.088 55.000 12.18 0.00 42.94 2.69
613 614 1.282157 GCTCCCTGGAAAGCTCCTAAA 59.718 52.381 12.18 0.00 42.94 1.85
614 615 2.941860 GCTCCCTGGAAAGCTCCTAAAC 60.942 54.545 12.18 0.00 42.94 2.01
615 616 1.633945 TCCCTGGAAAGCTCCTAAACC 59.366 52.381 0.00 0.00 42.94 3.27
616 617 1.679032 CCCTGGAAAGCTCCTAAACCG 60.679 57.143 0.00 0.00 42.94 4.44
617 618 1.003233 CCTGGAAAGCTCCTAAACCGT 59.997 52.381 0.00 0.00 42.94 4.83
618 619 2.347731 CTGGAAAGCTCCTAAACCGTC 58.652 52.381 0.00 0.00 42.94 4.79
619 620 1.975680 TGGAAAGCTCCTAAACCGTCT 59.024 47.619 0.00 0.00 42.94 4.18
620 621 2.028385 TGGAAAGCTCCTAAACCGTCTC 60.028 50.000 0.00 0.00 42.94 3.36
621 622 2.260481 GAAAGCTCCTAAACCGTCTCG 58.740 52.381 0.00 0.00 0.00 4.04
634 635 1.570813 CGTCTCGGCATATTGCAGAA 58.429 50.000 4.03 0.00 46.16 3.02
635 636 1.933181 CGTCTCGGCATATTGCAGAAA 59.067 47.619 4.03 0.00 46.16 2.52
636 637 2.285834 CGTCTCGGCATATTGCAGAAAC 60.286 50.000 4.03 0.58 46.16 2.78
637 638 2.939103 GTCTCGGCATATTGCAGAAACT 59.061 45.455 4.03 0.00 46.16 2.66
638 639 2.938451 TCTCGGCATATTGCAGAAACTG 59.062 45.455 4.03 0.00 46.16 3.16
648 649 1.576421 CAGAAACTGCGCCAAGTCC 59.424 57.895 4.18 0.00 0.00 3.85
649 650 1.148273 AGAAACTGCGCCAAGTCCA 59.852 52.632 4.18 0.00 0.00 4.02
650 651 1.166531 AGAAACTGCGCCAAGTCCAC 61.167 55.000 4.18 0.00 0.00 4.02
651 652 2.130073 GAAACTGCGCCAAGTCCACC 62.130 60.000 4.18 0.00 0.00 4.61
652 653 4.988598 ACTGCGCCAAGTCCACCG 62.989 66.667 4.18 0.00 0.00 4.94
653 654 4.988598 CTGCGCCAAGTCCACCGT 62.989 66.667 4.18 0.00 0.00 4.83
657 658 4.643387 GCCAAGTCCACCGTGCCT 62.643 66.667 0.00 0.00 0.00 4.75
658 659 2.113139 CCAAGTCCACCGTGCCTT 59.887 61.111 0.00 0.00 0.00 4.35
659 660 2.260869 CCAAGTCCACCGTGCCTTG 61.261 63.158 16.51 16.51 35.26 3.61
660 661 2.594592 AAGTCCACCGTGCCTTGC 60.595 61.111 0.00 0.00 0.00 4.01
661 662 4.988598 AGTCCACCGTGCCTTGCG 62.989 66.667 0.00 0.00 0.00 4.85
662 663 4.980805 GTCCACCGTGCCTTGCGA 62.981 66.667 0.00 0.00 0.00 5.10
663 664 4.980805 TCCACCGTGCCTTGCGAC 62.981 66.667 0.00 0.00 0.00 5.19
677 678 2.027605 CGACGGCCGCATCTACAT 59.972 61.111 28.58 1.54 0.00 2.29
678 679 1.591594 CGACGGCCGCATCTACATT 60.592 57.895 28.58 0.57 0.00 2.71
679 680 1.548973 CGACGGCCGCATCTACATTC 61.549 60.000 28.58 11.05 0.00 2.67
680 681 0.529773 GACGGCCGCATCTACATTCA 60.530 55.000 28.58 0.00 0.00 2.57
681 682 0.810031 ACGGCCGCATCTACATTCAC 60.810 55.000 28.58 0.00 0.00 3.18
682 683 0.530650 CGGCCGCATCTACATTCACT 60.531 55.000 14.67 0.00 0.00 3.41
683 684 1.668419 GGCCGCATCTACATTCACTT 58.332 50.000 0.00 0.00 0.00 3.16
684 685 2.017049 GGCCGCATCTACATTCACTTT 58.983 47.619 0.00 0.00 0.00 2.66
685 686 2.223340 GGCCGCATCTACATTCACTTTG 60.223 50.000 0.00 0.00 0.00 2.77
686 687 2.677836 GCCGCATCTACATTCACTTTGA 59.322 45.455 0.00 0.00 0.00 2.69
687 688 3.313526 GCCGCATCTACATTCACTTTGAT 59.686 43.478 0.00 0.00 0.00 2.57
688 689 4.553547 GCCGCATCTACATTCACTTTGATC 60.554 45.833 0.00 0.00 0.00 2.92
689 690 4.024556 CCGCATCTACATTCACTTTGATCC 60.025 45.833 0.00 0.00 0.00 3.36
690 691 4.813161 CGCATCTACATTCACTTTGATCCT 59.187 41.667 0.00 0.00 0.00 3.24
691 692 5.277202 CGCATCTACATTCACTTTGATCCTG 60.277 44.000 0.00 0.00 0.00 3.86
692 693 5.587844 GCATCTACATTCACTTTGATCCTGT 59.412 40.000 0.00 0.00 0.00 4.00
693 694 6.238320 GCATCTACATTCACTTTGATCCTGTC 60.238 42.308 0.00 0.00 0.00 3.51
694 695 5.734720 TCTACATTCACTTTGATCCTGTCC 58.265 41.667 0.00 0.00 0.00 4.02
695 696 3.338249 ACATTCACTTTGATCCTGTCCG 58.662 45.455 0.00 0.00 0.00 4.79
696 697 2.472695 TTCACTTTGATCCTGTCCGG 57.527 50.000 0.00 0.00 0.00 5.14
697 698 0.036388 TCACTTTGATCCTGTCCGGC 60.036 55.000 0.00 0.00 0.00 6.13
698 699 0.036010 CACTTTGATCCTGTCCGGCT 60.036 55.000 0.00 0.00 0.00 5.52
699 700 0.693049 ACTTTGATCCTGTCCGGCTT 59.307 50.000 0.00 0.00 0.00 4.35
700 701 1.339151 ACTTTGATCCTGTCCGGCTTC 60.339 52.381 0.00 0.00 0.00 3.86
701 702 0.035439 TTTGATCCTGTCCGGCTTCC 60.035 55.000 0.00 0.00 0.00 3.46
702 703 1.910580 TTGATCCTGTCCGGCTTCCC 61.911 60.000 0.00 0.00 0.00 3.97
703 704 3.090532 ATCCTGTCCGGCTTCCCC 61.091 66.667 0.00 0.00 0.00 4.81
712 713 2.190578 GGCTTCCCCGAGTGGATG 59.809 66.667 0.00 0.00 37.49 3.51
833 836 2.348362 CGCTACAACATCGCAGAAATCA 59.652 45.455 0.00 0.00 43.58 2.57
837 840 5.463392 GCTACAACATCGCAGAAATCATAGA 59.537 40.000 0.00 0.00 43.58 1.98
846 849 4.333649 CGCAGAAATCATAGACCATGTTGT 59.666 41.667 0.00 0.00 35.96 3.32
969 2186 3.028019 CACGCACGCGCCGTATAT 61.028 61.111 22.09 0.48 44.19 0.86
972 2189 1.068832 ACGCACGCGCCGTATATATG 61.069 55.000 21.39 3.48 44.19 1.78
976 2193 0.809385 ACGCGCCGTATATATGAGCT 59.191 50.000 5.73 0.00 38.73 4.09
980 2197 2.796383 GCGCCGTATATATGAGCTCCAG 60.796 54.545 12.15 0.00 0.00 3.86
1010 2231 4.026744 CACTGATCCTTAACCCTCTCTCA 58.973 47.826 0.00 0.00 0.00 3.27
1021 2246 0.104487 CCTCTCTCAGTGCATGCGAT 59.896 55.000 14.09 0.04 0.00 4.58
1055 2281 1.528824 CCAAGACCCGATCATGGCT 59.471 57.895 0.00 0.00 39.27 4.75
1056 2282 0.533755 CCAAGACCCGATCATGGCTC 60.534 60.000 0.00 0.00 39.27 4.70
1057 2283 0.877649 CAAGACCCGATCATGGCTCG 60.878 60.000 10.49 10.49 35.92 5.03
1099 2328 3.522731 CGTCCTCCTGCTCCTCCG 61.523 72.222 0.00 0.00 0.00 4.63
1373 2602 0.541296 ACTTCCTCGACCCGGAGAAA 60.541 55.000 0.73 0.00 36.08 2.52
1498 2727 0.249073 CGCATCACCTTCTCCTACGG 60.249 60.000 0.00 0.00 0.00 4.02
1769 2998 4.322385 GCCGTCAACAACACCGCC 62.322 66.667 0.00 0.00 0.00 6.13
1838 3067 4.521062 GACCTGCTCGCGCTCCAT 62.521 66.667 5.56 0.00 36.97 3.41
1979 3208 4.651008 GGGTTCGTCCGCGTGTCA 62.651 66.667 4.92 0.00 39.49 3.58
2180 3409 1.441729 GGCTAGGCACATGTCGCTA 59.558 57.895 12.16 8.63 0.00 4.26
2336 3565 0.179000 CCAAGATACCAGAAGCCGCT 59.821 55.000 0.00 0.00 0.00 5.52
2422 3651 2.088423 CCTGCTTGGGCGTTTGTAATA 58.912 47.619 0.00 0.00 42.25 0.98
2687 3917 7.420800 AGAAAATACAACTTGCACTTCTTCAG 58.579 34.615 0.00 0.00 0.00 3.02
2846 4076 5.362717 GGGGTATTAACAAGCTGCCTAAAAT 59.637 40.000 0.00 0.00 0.00 1.82
2937 4167 1.637553 ACCACTGGCAGATGGATCTTT 59.362 47.619 30.16 13.59 39.46 2.52
2975 4205 4.897509 TTTGCAGAGAGGAAGATGAAGA 57.102 40.909 0.00 0.00 0.00 2.87
3039 4270 1.347817 GCAAGGCAACGACGAGAGAG 61.348 60.000 0.00 0.00 46.39 3.20
3065 4296 1.746991 GCGGCTGGAGGAGGAAAAG 60.747 63.158 0.00 0.00 0.00 2.27
3066 4297 1.078143 CGGCTGGAGGAGGAAAAGG 60.078 63.158 0.00 0.00 0.00 3.11
3069 4300 1.501654 GCTGGAGGAGGAAAAGGGGT 61.502 60.000 0.00 0.00 0.00 4.95
3071 4302 1.004862 CTGGAGGAGGAAAAGGGGTTC 59.995 57.143 0.00 0.00 0.00 3.62
3072 4303 1.373536 GGAGGAGGAAAAGGGGTTCT 58.626 55.000 0.00 0.00 0.00 3.01
3074 4305 2.917600 GGAGGAGGAAAAGGGGTTCTTA 59.082 50.000 0.00 0.00 34.78 2.10
3096 4327 9.363763 TCTTATATATAGTCGACTTACACGAGG 57.636 37.037 25.44 9.29 40.37 4.63
3117 4348 9.162733 ACGAGGAAAAGGGGTTCTTATATATAA 57.837 33.333 5.10 5.10 34.78 0.98
3182 4413 0.613777 AACCTCTTAGGCCCTGTTCG 59.386 55.000 0.00 0.00 39.63 3.95
3252 4483 2.337170 CCGTTTTGTTTCCGGCCC 59.663 61.111 0.00 0.00 34.62 5.80
3293 4524 7.186570 AGGTGCAAATAAGCCATTTTATTCT 57.813 32.000 0.00 0.00 34.49 2.40
3321 4552 5.831997 CAGATGATGTACACCTGTAATCGA 58.168 41.667 0.00 0.00 35.51 3.59
3425 4656 4.337555 CCCTGAACTATTGAAATCCTGCTG 59.662 45.833 0.00 0.00 0.00 4.41
3741 4972 7.857389 CAGACGATTGAAAACTGAAAAATCTGA 59.143 33.333 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.222121 GACCTACGGGCCCTACGG 61.222 72.222 22.43 18.68 35.63 4.02
19 20 3.589881 CGACCTACGGGCCCTACG 61.590 72.222 22.43 9.59 38.46 3.51
20 21 3.909285 GCGACCTACGGGCCCTAC 61.909 72.222 22.43 3.50 42.83 3.18
25 26 4.642542 GATCGGCGACCTACGGGC 62.643 72.222 13.76 0.00 42.83 6.13
26 27 3.974757 GGATCGGCGACCTACGGG 61.975 72.222 13.76 0.00 42.83 5.28
27 28 3.974757 GGGATCGGCGACCTACGG 61.975 72.222 13.76 0.00 42.83 4.02
28 29 2.473664 GATGGGATCGGCGACCTACG 62.474 65.000 13.76 0.00 45.66 3.51
29 30 1.289380 GATGGGATCGGCGACCTAC 59.711 63.158 13.76 0.00 0.00 3.18
30 31 1.906824 GGATGGGATCGGCGACCTA 60.907 63.158 13.76 14.26 0.00 3.08
31 32 3.234730 GGATGGGATCGGCGACCT 61.235 66.667 13.76 0.00 0.00 3.85
32 33 3.521529 CTGGATGGGATCGGCGACC 62.522 68.421 13.76 15.71 0.00 4.79
33 34 2.029666 CTGGATGGGATCGGCGAC 59.970 66.667 13.76 6.32 0.00 5.19
34 35 3.233980 CCTGGATGGGATCGGCGA 61.234 66.667 13.87 13.87 0.00 5.54
43 44 2.063979 TACGCTGGTCCCTGGATGG 61.064 63.158 0.00 0.00 0.00 3.51
44 45 1.144057 GTACGCTGGTCCCTGGATG 59.856 63.158 0.00 0.00 0.00 3.51
45 46 2.423898 CGTACGCTGGTCCCTGGAT 61.424 63.158 0.52 0.00 0.00 3.41
46 47 3.066190 CGTACGCTGGTCCCTGGA 61.066 66.667 0.52 0.00 0.00 3.86
47 48 2.558554 CTTCGTACGCTGGTCCCTGG 62.559 65.000 11.24 0.00 0.00 4.45
48 49 1.153823 CTTCGTACGCTGGTCCCTG 60.154 63.158 11.24 0.00 0.00 4.45
49 50 2.348888 CCTTCGTACGCTGGTCCCT 61.349 63.158 11.24 0.00 0.00 4.20
50 51 1.673808 ATCCTTCGTACGCTGGTCCC 61.674 60.000 20.25 0.00 0.00 4.46
51 52 0.248949 GATCCTTCGTACGCTGGTCC 60.249 60.000 20.25 12.47 0.00 4.46
52 53 0.739561 AGATCCTTCGTACGCTGGTC 59.260 55.000 20.25 17.00 0.00 4.02
53 54 0.739561 GAGATCCTTCGTACGCTGGT 59.260 55.000 20.25 11.44 0.00 4.00
54 55 0.030908 GGAGATCCTTCGTACGCTGG 59.969 60.000 11.24 14.63 0.00 4.85
55 56 0.030908 GGGAGATCCTTCGTACGCTG 59.969 60.000 11.24 5.37 35.95 5.18
56 57 1.445716 CGGGAGATCCTTCGTACGCT 61.446 60.000 11.24 0.00 35.95 5.07
57 58 1.008767 CGGGAGATCCTTCGTACGC 60.009 63.158 11.24 0.00 35.95 4.42
58 59 1.653115 CCGGGAGATCCTTCGTACG 59.347 63.158 9.53 9.53 35.95 3.67
59 60 0.466922 TCCCGGGAGATCCTTCGTAC 60.467 60.000 22.63 0.00 35.95 3.67
60 61 0.466922 GTCCCGGGAGATCCTTCGTA 60.467 60.000 27.72 0.00 35.95 3.43
61 62 1.757340 GTCCCGGGAGATCCTTCGT 60.757 63.158 27.72 0.00 35.95 3.85
62 63 2.499827 GGTCCCGGGAGATCCTTCG 61.500 68.421 27.72 0.00 35.95 3.79
63 64 2.499827 CGGTCCCGGGAGATCCTTC 61.500 68.421 27.72 10.37 35.95 3.46
64 65 2.444140 CGGTCCCGGGAGATCCTT 60.444 66.667 27.72 0.00 35.95 3.36
108 109 2.801631 CCTCCTCGGATCAGCCACC 61.802 68.421 0.00 0.00 35.94 4.61
109 110 2.818132 CCTCCTCGGATCAGCCAC 59.182 66.667 0.00 0.00 35.94 5.01
110 111 3.157252 GCCTCCTCGGATCAGCCA 61.157 66.667 0.00 0.00 35.94 4.75
111 112 4.292178 CGCCTCCTCGGATCAGCC 62.292 72.222 0.00 0.00 33.16 4.85
112 113 4.959596 GCGCCTCCTCGGATCAGC 62.960 72.222 0.00 0.00 33.16 4.26
113 114 4.292178 GGCGCCTCCTCGGATCAG 62.292 72.222 22.15 0.00 33.16 2.90
120 121 4.554036 GATGGTGGGCGCCTCCTC 62.554 72.222 30.09 23.00 37.97 3.71
123 124 4.899239 CTCGATGGTGGGCGCCTC 62.899 72.222 28.56 19.28 0.00 4.70
127 128 3.461773 AGTCCTCGATGGTGGGCG 61.462 66.667 0.00 0.00 36.54 6.13
128 129 2.187946 CAGTCCTCGATGGTGGGC 59.812 66.667 0.00 0.00 37.07 5.36
129 130 2.903357 CCAGTCCTCGATGGTGGG 59.097 66.667 0.00 0.00 37.07 4.61
130 131 2.187946 GCCAGTCCTCGATGGTGG 59.812 66.667 4.77 5.39 38.91 4.61
131 132 2.187946 GGCCAGTCCTCGATGGTG 59.812 66.667 0.00 0.00 38.91 4.17
132 133 3.461773 CGGCCAGTCCTCGATGGT 61.462 66.667 2.24 0.00 38.91 3.55
133 134 4.227134 CCGGCCAGTCCTCGATGG 62.227 72.222 2.24 0.00 39.73 3.51
134 135 3.461773 ACCGGCCAGTCCTCGATG 61.462 66.667 0.00 0.00 0.00 3.84
135 136 2.849096 TACACCGGCCAGTCCTCGAT 62.849 60.000 0.00 0.00 0.00 3.59
136 137 3.572447 TACACCGGCCAGTCCTCGA 62.572 63.158 0.00 0.00 0.00 4.04
137 138 3.064987 CTACACCGGCCAGTCCTCG 62.065 68.421 0.00 0.00 0.00 4.63
138 139 1.681327 TCTACACCGGCCAGTCCTC 60.681 63.158 0.00 0.00 0.00 3.71
139 140 1.982938 GTCTACACCGGCCAGTCCT 60.983 63.158 0.00 0.00 0.00 3.85
140 141 2.577593 GTCTACACCGGCCAGTCC 59.422 66.667 0.00 0.00 0.00 3.85
141 142 2.577593 GGTCTACACCGGCCAGTC 59.422 66.667 0.00 0.00 31.06 3.51
149 150 1.321074 CCCTGGTCTCGGTCTACACC 61.321 65.000 0.00 0.00 39.69 4.16
150 151 1.321074 CCCCTGGTCTCGGTCTACAC 61.321 65.000 0.00 0.00 0.00 2.90
151 152 1.000019 CCCCTGGTCTCGGTCTACA 60.000 63.158 0.00 0.00 0.00 2.74
152 153 1.757340 CCCCCTGGTCTCGGTCTAC 60.757 68.421 0.00 0.00 0.00 2.59
153 154 2.687902 CCCCCTGGTCTCGGTCTA 59.312 66.667 0.00 0.00 0.00 2.59
166 167 3.912745 TTTCTTTCCTCGCGCCCCC 62.913 63.158 0.00 0.00 0.00 5.40
167 168 2.359478 TTTCTTTCCTCGCGCCCC 60.359 61.111 0.00 0.00 0.00 5.80
168 169 2.868196 GTTTCTTTCCTCGCGCCC 59.132 61.111 0.00 0.00 0.00 6.13
169 170 2.474712 CGTTTCTTTCCTCGCGCC 59.525 61.111 0.00 0.00 0.00 6.53
170 171 2.474712 CCGTTTCTTTCCTCGCGC 59.525 61.111 0.00 0.00 0.00 6.86
171 172 2.474712 GCCGTTTCTTTCCTCGCG 59.525 61.111 0.00 0.00 0.00 5.87
172 173 1.359459 ATCGCCGTTTCTTTCCTCGC 61.359 55.000 0.00 0.00 0.00 5.03
173 174 0.370273 CATCGCCGTTTCTTTCCTCG 59.630 55.000 0.00 0.00 0.00 4.63
174 175 0.097150 GCATCGCCGTTTCTTTCCTC 59.903 55.000 0.00 0.00 0.00 3.71
175 176 0.605319 TGCATCGCCGTTTCTTTCCT 60.605 50.000 0.00 0.00 0.00 3.36
176 177 0.179189 CTGCATCGCCGTTTCTTTCC 60.179 55.000 0.00 0.00 0.00 3.13
177 178 0.179189 CCTGCATCGCCGTTTCTTTC 60.179 55.000 0.00 0.00 0.00 2.62
178 179 1.875963 CCTGCATCGCCGTTTCTTT 59.124 52.632 0.00 0.00 0.00 2.52
179 180 2.690778 GCCTGCATCGCCGTTTCTT 61.691 57.895 0.00 0.00 0.00 2.52
180 181 3.127533 GCCTGCATCGCCGTTTCT 61.128 61.111 0.00 0.00 0.00 2.52
181 182 4.520846 CGCCTGCATCGCCGTTTC 62.521 66.667 0.00 0.00 0.00 2.78
227 228 3.753070 GATCGCACCGACCTCCGTC 62.753 68.421 0.00 0.00 39.18 4.79
228 229 3.823330 GATCGCACCGACCTCCGT 61.823 66.667 0.00 0.00 39.18 4.69
229 230 4.907034 CGATCGCACCGACCTCCG 62.907 72.222 0.26 0.00 39.18 4.63
253 254 2.572095 TATGTCTTCCACTGCCGCCG 62.572 60.000 0.00 0.00 0.00 6.46
254 255 0.179045 ATATGTCTTCCACTGCCGCC 60.179 55.000 0.00 0.00 0.00 6.13
255 256 0.940126 CATATGTCTTCCACTGCCGC 59.060 55.000 0.00 0.00 0.00 6.53
256 257 2.477825 CTCATATGTCTTCCACTGCCG 58.522 52.381 1.90 0.00 0.00 5.69
257 258 2.171448 ACCTCATATGTCTTCCACTGCC 59.829 50.000 1.90 0.00 0.00 4.85
258 259 3.550437 ACCTCATATGTCTTCCACTGC 57.450 47.619 1.90 0.00 0.00 4.40
259 260 5.089970 TCAACCTCATATGTCTTCCACTG 57.910 43.478 1.90 0.00 0.00 3.66
260 261 5.965033 ATCAACCTCATATGTCTTCCACT 57.035 39.130 1.90 0.00 0.00 4.00
261 262 5.992217 GGTATCAACCTCATATGTCTTCCAC 59.008 44.000 1.90 0.00 43.08 4.02
262 263 5.665360 TGGTATCAACCTCATATGTCTTCCA 59.335 40.000 1.90 0.00 46.91 3.53
263 264 6.174720 TGGTATCAACCTCATATGTCTTCC 57.825 41.667 1.90 0.00 46.91 3.46
264 265 7.220030 ACATGGTATCAACCTCATATGTCTTC 58.780 38.462 1.90 0.00 46.91 2.87
265 266 7.141758 ACATGGTATCAACCTCATATGTCTT 57.858 36.000 1.90 0.00 46.91 3.01
266 267 6.753913 ACATGGTATCAACCTCATATGTCT 57.246 37.500 1.90 0.00 46.91 3.41
267 268 8.367911 TCTTACATGGTATCAACCTCATATGTC 58.632 37.037 1.90 0.00 46.91 3.06
268 269 8.150945 GTCTTACATGGTATCAACCTCATATGT 58.849 37.037 1.90 0.00 46.91 2.29
269 270 8.370940 AGTCTTACATGGTATCAACCTCATATG 58.629 37.037 0.00 0.00 46.91 1.78
270 271 8.497910 AGTCTTACATGGTATCAACCTCATAT 57.502 34.615 0.00 0.00 46.91 1.78
271 272 7.914427 AGTCTTACATGGTATCAACCTCATA 57.086 36.000 0.00 0.00 46.91 2.15
272 273 6.814954 AGTCTTACATGGTATCAACCTCAT 57.185 37.500 0.00 0.00 46.91 2.90
273 274 6.620877 AAGTCTTACATGGTATCAACCTCA 57.379 37.500 0.00 0.00 46.91 3.86
274 275 7.210873 CCTAAGTCTTACATGGTATCAACCTC 58.789 42.308 0.00 0.00 46.91 3.85
275 276 6.099845 CCCTAAGTCTTACATGGTATCAACCT 59.900 42.308 0.00 0.00 46.91 3.50
276 277 6.126854 ACCCTAAGTCTTACATGGTATCAACC 60.127 42.308 0.00 0.00 46.98 3.77
277 278 6.885922 ACCCTAAGTCTTACATGGTATCAAC 58.114 40.000 0.00 0.00 0.00 3.18
278 279 7.504926 AACCCTAAGTCTTACATGGTATCAA 57.495 36.000 0.00 0.00 0.00 2.57
279 280 7.335627 CAAACCCTAAGTCTTACATGGTATCA 58.664 38.462 0.00 0.00 0.00 2.15
280 281 6.766467 CCAAACCCTAAGTCTTACATGGTATC 59.234 42.308 0.00 0.00 0.00 2.24
281 282 6.353602 CCCAAACCCTAAGTCTTACATGGTAT 60.354 42.308 0.00 0.00 0.00 2.73
282 283 5.045432 CCCAAACCCTAAGTCTTACATGGTA 60.045 44.000 0.00 0.00 0.00 3.25
283 284 4.263771 CCCAAACCCTAAGTCTTACATGGT 60.264 45.833 0.00 0.00 0.00 3.55
284 285 4.270008 CCCAAACCCTAAGTCTTACATGG 58.730 47.826 0.00 0.00 0.00 3.66
285 286 4.018779 TCCCCAAACCCTAAGTCTTACATG 60.019 45.833 0.00 0.00 0.00 3.21
286 287 4.180723 TCCCCAAACCCTAAGTCTTACAT 58.819 43.478 0.00 0.00 0.00 2.29
287 288 3.600433 TCCCCAAACCCTAAGTCTTACA 58.400 45.455 0.00 0.00 0.00 2.41
288 289 4.645863 TTCCCCAAACCCTAAGTCTTAC 57.354 45.455 0.00 0.00 0.00 2.34
289 290 4.666431 AGTTTCCCCAAACCCTAAGTCTTA 59.334 41.667 0.00 0.00 42.72 2.10
290 291 3.465966 AGTTTCCCCAAACCCTAAGTCTT 59.534 43.478 0.00 0.00 42.72 3.01
291 292 3.061369 AGTTTCCCCAAACCCTAAGTCT 58.939 45.455 0.00 0.00 42.72 3.24
292 293 3.154710 CAGTTTCCCCAAACCCTAAGTC 58.845 50.000 0.00 0.00 42.72 3.01
293 294 2.755208 GCAGTTTCCCCAAACCCTAAGT 60.755 50.000 0.00 0.00 42.72 2.24
294 295 1.893137 GCAGTTTCCCCAAACCCTAAG 59.107 52.381 0.00 0.00 42.72 2.18
295 296 1.218196 TGCAGTTTCCCCAAACCCTAA 59.782 47.619 0.00 0.00 42.72 2.69
296 297 0.854218 TGCAGTTTCCCCAAACCCTA 59.146 50.000 0.00 0.00 42.72 3.53
297 298 0.759060 GTGCAGTTTCCCCAAACCCT 60.759 55.000 0.00 0.00 42.72 4.34
298 299 1.745890 GTGCAGTTTCCCCAAACCC 59.254 57.895 0.00 0.00 42.72 4.11
299 300 1.104577 TCGTGCAGTTTCCCCAAACC 61.105 55.000 0.00 0.00 42.72 3.27
300 301 0.030235 GTCGTGCAGTTTCCCCAAAC 59.970 55.000 0.00 0.00 42.14 2.93
301 302 0.394488 TGTCGTGCAGTTTCCCCAAA 60.394 50.000 0.00 0.00 0.00 3.28
302 303 1.098712 GTGTCGTGCAGTTTCCCCAA 61.099 55.000 0.00 0.00 0.00 4.12
303 304 1.525077 GTGTCGTGCAGTTTCCCCA 60.525 57.895 0.00 0.00 0.00 4.96
304 305 2.258726 GGTGTCGTGCAGTTTCCCC 61.259 63.158 0.00 0.00 0.00 4.81
305 306 2.258726 GGGTGTCGTGCAGTTTCCC 61.259 63.158 0.00 0.00 0.00 3.97
306 307 2.604174 CGGGTGTCGTGCAGTTTCC 61.604 63.158 0.00 0.00 0.00 3.13
307 308 2.935955 CGGGTGTCGTGCAGTTTC 59.064 61.111 0.00 0.00 0.00 2.78
322 323 3.055675 TGAGATAACCACACCCTTAACGG 60.056 47.826 0.00 0.00 0.00 4.44
323 324 4.196626 TGAGATAACCACACCCTTAACG 57.803 45.455 0.00 0.00 0.00 3.18
340 341 9.488762 CTTGGTGTACCCCTTATATATATGAGA 57.511 37.037 14.49 0.00 34.29 3.27
341 342 9.488762 TCTTGGTGTACCCCTTATATATATGAG 57.511 37.037 5.44 6.52 34.29 2.90
344 345 9.799223 ACATCTTGGTGTACCCCTTATATATAT 57.201 33.333 0.00 0.00 34.29 0.86
346 347 9.043548 GTACATCTTGGTGTACCCCTTATATAT 57.956 37.037 11.87 0.00 45.46 0.86
347 348 8.426569 GTACATCTTGGTGTACCCCTTATATA 57.573 38.462 11.87 0.00 45.46 0.86
348 349 7.312415 GTACATCTTGGTGTACCCCTTATAT 57.688 40.000 11.87 0.00 45.46 0.86
349 350 6.736110 GTACATCTTGGTGTACCCCTTATA 57.264 41.667 11.87 0.00 45.46 0.98
350 351 5.625568 GTACATCTTGGTGTACCCCTTAT 57.374 43.478 11.87 0.00 45.46 1.73
352 353 3.994931 GTACATCTTGGTGTACCCCTT 57.005 47.619 11.87 0.00 45.46 3.95
413 414 9.672673 AAGCAATTGTACTTGATGTTAGACTAT 57.327 29.630 7.40 0.00 0.00 2.12
414 415 9.151471 GAAGCAATTGTACTTGATGTTAGACTA 57.849 33.333 7.40 0.00 0.00 2.59
415 416 7.661437 TGAAGCAATTGTACTTGATGTTAGACT 59.339 33.333 7.40 0.00 0.00 3.24
416 417 7.806690 TGAAGCAATTGTACTTGATGTTAGAC 58.193 34.615 7.40 0.00 0.00 2.59
417 418 7.977789 TGAAGCAATTGTACTTGATGTTAGA 57.022 32.000 7.40 0.00 0.00 2.10
437 438 4.569966 CAGGTACTTCTGCTGCTTATGAAG 59.430 45.833 16.87 16.87 40.97 3.02
438 439 4.222810 TCAGGTACTTCTGCTGCTTATGAA 59.777 41.667 0.00 0.02 34.60 2.57
439 440 3.769300 TCAGGTACTTCTGCTGCTTATGA 59.231 43.478 0.00 0.00 34.60 2.15
440 441 3.868077 GTCAGGTACTTCTGCTGCTTATG 59.132 47.826 0.00 0.00 34.60 1.90
441 442 3.772025 AGTCAGGTACTTCTGCTGCTTAT 59.228 43.478 0.00 0.00 34.60 1.73
442 443 3.165875 AGTCAGGTACTTCTGCTGCTTA 58.834 45.455 0.00 0.00 34.60 3.09
443 444 1.974236 AGTCAGGTACTTCTGCTGCTT 59.026 47.619 0.00 0.00 34.60 3.91
444 445 1.638529 AGTCAGGTACTTCTGCTGCT 58.361 50.000 0.00 0.00 34.60 4.24
445 446 2.464157 AAGTCAGGTACTTCTGCTGC 57.536 50.000 0.00 0.00 45.64 5.25
453 454 6.935208 GGACTGTAAAATGAAAGTCAGGTACT 59.065 38.462 4.27 0.00 40.67 2.73
454 455 6.128634 CGGACTGTAAAATGAAAGTCAGGTAC 60.129 42.308 4.27 0.00 40.67 3.34
455 456 5.929992 CGGACTGTAAAATGAAAGTCAGGTA 59.070 40.000 4.27 0.00 40.67 3.08
456 457 4.755123 CGGACTGTAAAATGAAAGTCAGGT 59.245 41.667 4.27 0.00 40.67 4.00
457 458 4.994852 TCGGACTGTAAAATGAAAGTCAGG 59.005 41.667 4.27 0.00 40.67 3.86
458 459 5.120830 CCTCGGACTGTAAAATGAAAGTCAG 59.879 44.000 4.27 0.43 40.67 3.51
459 460 4.994852 CCTCGGACTGTAAAATGAAAGTCA 59.005 41.667 4.27 0.00 40.67 3.41
460 461 4.142881 GCCTCGGACTGTAAAATGAAAGTC 60.143 45.833 0.00 0.00 38.65 3.01
461 462 3.751698 GCCTCGGACTGTAAAATGAAAGT 59.248 43.478 0.00 0.00 0.00 2.66
462 463 3.181520 CGCCTCGGACTGTAAAATGAAAG 60.182 47.826 0.00 0.00 0.00 2.62
463 464 2.739913 CGCCTCGGACTGTAAAATGAAA 59.260 45.455 0.00 0.00 0.00 2.69
464 465 2.028839 TCGCCTCGGACTGTAAAATGAA 60.029 45.455 0.00 0.00 0.00 2.57
465 466 1.546923 TCGCCTCGGACTGTAAAATGA 59.453 47.619 0.00 0.00 0.00 2.57
466 467 2.004583 TCGCCTCGGACTGTAAAATG 57.995 50.000 0.00 0.00 0.00 2.32
467 468 2.936498 CAATCGCCTCGGACTGTAAAAT 59.064 45.455 0.00 0.00 0.00 1.82
468 469 2.343101 CAATCGCCTCGGACTGTAAAA 58.657 47.619 0.00 0.00 0.00 1.52
469 470 2.004583 CAATCGCCTCGGACTGTAAA 57.995 50.000 0.00 0.00 0.00 2.01
470 471 0.459585 GCAATCGCCTCGGACTGTAA 60.460 55.000 0.00 0.00 0.00 2.41
471 472 1.141019 GCAATCGCCTCGGACTGTA 59.859 57.895 0.00 0.00 0.00 2.74
472 473 2.125512 GCAATCGCCTCGGACTGT 60.126 61.111 0.00 0.00 0.00 3.55
473 474 1.091771 ATTGCAATCGCCTCGGACTG 61.092 55.000 5.99 0.00 37.32 3.51
474 475 1.091771 CATTGCAATCGCCTCGGACT 61.092 55.000 9.53 0.00 37.32 3.85
475 476 1.353103 CATTGCAATCGCCTCGGAC 59.647 57.895 9.53 0.00 37.32 4.79
476 477 1.078497 ACATTGCAATCGCCTCGGA 60.078 52.632 9.53 0.00 37.32 4.55
477 478 1.353103 GACATTGCAATCGCCTCGG 59.647 57.895 9.53 0.00 37.32 4.63
478 479 1.091771 AGGACATTGCAATCGCCTCG 61.092 55.000 19.22 7.11 37.32 4.63
479 480 0.379669 CAGGACATTGCAATCGCCTC 59.620 55.000 21.19 9.53 37.32 4.70
480 481 1.660560 GCAGGACATTGCAATCGCCT 61.661 55.000 19.22 19.22 43.53 5.52
481 482 1.226773 GCAGGACATTGCAATCGCC 60.227 57.895 9.53 13.53 43.53 5.54
482 483 4.389772 GCAGGACATTGCAATCGC 57.610 55.556 9.53 4.19 43.53 4.58
488 489 2.358957 TCTGTATGTGCAGGACATTGC 58.641 47.619 13.42 7.50 43.20 3.56
489 490 4.449131 AGATCTGTATGTGCAGGACATTG 58.551 43.478 13.42 4.70 43.20 2.82
490 491 4.767578 AGATCTGTATGTGCAGGACATT 57.232 40.909 13.42 0.00 43.20 2.71
492 493 3.515104 TGAAGATCTGTATGTGCAGGACA 59.485 43.478 0.00 0.00 39.53 4.02
493 494 4.118410 CTGAAGATCTGTATGTGCAGGAC 58.882 47.826 0.00 0.00 37.12 3.85
494 495 4.026052 TCTGAAGATCTGTATGTGCAGGA 58.974 43.478 0.00 0.00 33.60 3.86
495 496 4.099113 TCTCTGAAGATCTGTATGTGCAGG 59.901 45.833 0.00 0.00 33.60 4.85
496 497 5.259832 TCTCTGAAGATCTGTATGTGCAG 57.740 43.478 0.00 0.00 34.00 4.41
497 498 4.099113 CCTCTCTGAAGATCTGTATGTGCA 59.901 45.833 0.00 0.00 0.00 4.57
498 499 4.501229 CCCTCTCTGAAGATCTGTATGTGC 60.501 50.000 0.00 0.00 0.00 4.57
499 500 4.648762 ACCCTCTCTGAAGATCTGTATGTG 59.351 45.833 0.00 0.00 0.00 3.21
500 501 4.877773 ACCCTCTCTGAAGATCTGTATGT 58.122 43.478 0.00 0.00 0.00 2.29
501 502 4.892345 TGACCCTCTCTGAAGATCTGTATG 59.108 45.833 0.00 0.00 0.00 2.39
502 503 5.136068 TGACCCTCTCTGAAGATCTGTAT 57.864 43.478 0.00 0.00 0.00 2.29
503 504 4.592997 TGACCCTCTCTGAAGATCTGTA 57.407 45.455 0.00 0.00 0.00 2.74
504 505 3.464720 TGACCCTCTCTGAAGATCTGT 57.535 47.619 0.00 0.00 0.00 3.41
505 506 3.004629 CGATGACCCTCTCTGAAGATCTG 59.995 52.174 0.00 0.00 0.00 2.90
506 507 3.221771 CGATGACCCTCTCTGAAGATCT 58.778 50.000 0.00 0.00 0.00 2.75
507 508 2.288152 GCGATGACCCTCTCTGAAGATC 60.288 54.545 0.00 0.00 0.00 2.75
508 509 1.686052 GCGATGACCCTCTCTGAAGAT 59.314 52.381 0.00 0.00 0.00 2.40
509 510 1.107114 GCGATGACCCTCTCTGAAGA 58.893 55.000 0.00 0.00 0.00 2.87
510 511 1.110442 AGCGATGACCCTCTCTGAAG 58.890 55.000 0.00 0.00 0.00 3.02
511 512 1.478510 GAAGCGATGACCCTCTCTGAA 59.521 52.381 0.00 0.00 0.00 3.02
512 513 1.107114 GAAGCGATGACCCTCTCTGA 58.893 55.000 0.00 0.00 0.00 3.27
513 514 0.103937 GGAAGCGATGACCCTCTCTG 59.896 60.000 0.00 0.00 0.00 3.35
514 515 1.045911 GGGAAGCGATGACCCTCTCT 61.046 60.000 8.65 0.00 40.39 3.10
515 516 1.443828 GGGAAGCGATGACCCTCTC 59.556 63.158 8.65 0.00 40.39 3.20
516 517 2.427245 CGGGAAGCGATGACCCTCT 61.427 63.158 13.04 0.00 41.28 3.69
517 518 1.389609 TACGGGAAGCGATGACCCTC 61.390 60.000 13.04 0.00 41.28 4.30
518 519 0.759436 ATACGGGAAGCGATGACCCT 60.759 55.000 13.04 4.66 41.28 4.34
519 520 0.319641 GATACGGGAAGCGATGACCC 60.320 60.000 6.18 6.18 40.17 4.46
520 521 0.663568 CGATACGGGAAGCGATGACC 60.664 60.000 0.00 0.00 0.00 4.02
521 522 1.276145 GCGATACGGGAAGCGATGAC 61.276 60.000 0.00 0.00 0.00 3.06
522 523 1.007734 GCGATACGGGAAGCGATGA 60.008 57.895 0.00 0.00 0.00 2.92
523 524 2.022129 GGCGATACGGGAAGCGATG 61.022 63.158 0.00 0.00 0.00 3.84
524 525 2.338984 GGCGATACGGGAAGCGAT 59.661 61.111 0.00 0.00 0.00 4.58
525 526 3.133767 CTGGCGATACGGGAAGCGA 62.134 63.158 0.00 0.00 0.00 4.93
526 527 2.658593 CTGGCGATACGGGAAGCG 60.659 66.667 0.00 0.00 0.00 4.68
527 528 1.883084 CACTGGCGATACGGGAAGC 60.883 63.158 0.00 0.00 0.00 3.86
528 529 1.883084 GCACTGGCGATACGGGAAG 60.883 63.158 0.00 0.00 0.00 3.46
529 530 2.185867 GCACTGGCGATACGGGAA 59.814 61.111 0.00 0.00 0.00 3.97
545 546 0.460459 GAACCGGGAGTGCTAGAAGC 60.460 60.000 6.32 0.00 42.82 3.86
546 547 0.895530 TGAACCGGGAGTGCTAGAAG 59.104 55.000 6.32 0.00 0.00 2.85
547 548 1.480954 GATGAACCGGGAGTGCTAGAA 59.519 52.381 6.32 0.00 0.00 2.10
548 549 1.112113 GATGAACCGGGAGTGCTAGA 58.888 55.000 6.32 0.00 0.00 2.43
549 550 0.105039 GGATGAACCGGGAGTGCTAG 59.895 60.000 6.32 0.00 0.00 3.42
550 551 0.616395 TGGATGAACCGGGAGTGCTA 60.616 55.000 6.32 0.00 42.61 3.49
551 552 1.274703 ATGGATGAACCGGGAGTGCT 61.275 55.000 6.32 0.00 42.61 4.40
552 553 0.468226 TATGGATGAACCGGGAGTGC 59.532 55.000 6.32 0.00 42.61 4.40
553 554 3.141398 CAATATGGATGAACCGGGAGTG 58.859 50.000 6.32 0.00 42.61 3.51
554 555 2.106511 CCAATATGGATGAACCGGGAGT 59.893 50.000 6.32 0.00 40.96 3.85
555 556 2.783135 CCAATATGGATGAACCGGGAG 58.217 52.381 6.32 0.00 40.96 4.30
556 557 1.202879 GCCAATATGGATGAACCGGGA 60.203 52.381 6.32 0.00 40.96 5.14
557 558 1.202927 AGCCAATATGGATGAACCGGG 60.203 52.381 6.32 0.00 40.96 5.73
558 559 2.276732 AGCCAATATGGATGAACCGG 57.723 50.000 0.00 0.00 40.96 5.28
559 560 5.766150 TTTTAGCCAATATGGATGAACCG 57.234 39.130 0.00 0.00 40.96 4.44
560 561 9.476202 GTTAATTTTAGCCAATATGGATGAACC 57.524 33.333 0.00 0.00 40.96 3.62
563 564 9.420118 AGTGTTAATTTTAGCCAATATGGATGA 57.580 29.630 0.00 0.00 40.96 2.92
564 565 9.467258 CAGTGTTAATTTTAGCCAATATGGATG 57.533 33.333 0.00 0.00 40.96 3.51
565 566 9.420118 TCAGTGTTAATTTTAGCCAATATGGAT 57.580 29.630 0.00 0.00 40.96 3.41
566 567 8.815565 TCAGTGTTAATTTTAGCCAATATGGA 57.184 30.769 0.00 0.00 40.96 3.41
567 568 9.520204 CTTCAGTGTTAATTTTAGCCAATATGG 57.480 33.333 0.00 0.00 41.55 2.74
568 569 9.023967 GCTTCAGTGTTAATTTTAGCCAATATG 57.976 33.333 0.00 0.00 0.00 1.78
569 570 8.971073 AGCTTCAGTGTTAATTTTAGCCAATAT 58.029 29.630 0.00 0.00 0.00 1.28
570 571 8.348285 AGCTTCAGTGTTAATTTTAGCCAATA 57.652 30.769 0.00 0.00 0.00 1.90
571 572 7.232118 AGCTTCAGTGTTAATTTTAGCCAAT 57.768 32.000 0.00 0.00 0.00 3.16
572 573 6.294508 GGAGCTTCAGTGTTAATTTTAGCCAA 60.295 38.462 0.00 0.00 0.00 4.52
573 574 5.183140 GGAGCTTCAGTGTTAATTTTAGCCA 59.817 40.000 0.00 0.00 0.00 4.75
574 575 5.393135 GGGAGCTTCAGTGTTAATTTTAGCC 60.393 44.000 0.00 0.00 0.00 3.93
575 576 5.416013 AGGGAGCTTCAGTGTTAATTTTAGC 59.584 40.000 0.00 0.00 0.00 3.09
576 577 6.127897 CCAGGGAGCTTCAGTGTTAATTTTAG 60.128 42.308 0.00 0.00 0.00 1.85
577 578 5.710099 CCAGGGAGCTTCAGTGTTAATTTTA 59.290 40.000 0.00 0.00 0.00 1.52
578 579 4.524328 CCAGGGAGCTTCAGTGTTAATTTT 59.476 41.667 0.00 0.00 0.00 1.82
579 580 4.082125 CCAGGGAGCTTCAGTGTTAATTT 58.918 43.478 0.00 0.00 0.00 1.82
580 581 3.330701 TCCAGGGAGCTTCAGTGTTAATT 59.669 43.478 0.00 0.00 0.00 1.40
581 582 2.912956 TCCAGGGAGCTTCAGTGTTAAT 59.087 45.455 0.00 0.00 0.00 1.40
582 583 2.334977 TCCAGGGAGCTTCAGTGTTAA 58.665 47.619 0.00 0.00 0.00 2.01
583 584 2.024176 TCCAGGGAGCTTCAGTGTTA 57.976 50.000 0.00 0.00 0.00 2.41
584 585 1.140312 TTCCAGGGAGCTTCAGTGTT 58.860 50.000 0.00 0.00 0.00 3.32
585 586 1.072965 CTTTCCAGGGAGCTTCAGTGT 59.927 52.381 0.00 0.00 0.00 3.55
586 587 1.818642 CTTTCCAGGGAGCTTCAGTG 58.181 55.000 0.00 0.00 0.00 3.66
587 588 0.037447 GCTTTCCAGGGAGCTTCAGT 59.963 55.000 8.14 0.00 36.01 3.41
588 589 0.327591 AGCTTTCCAGGGAGCTTCAG 59.672 55.000 11.35 0.00 46.55 3.02
589 590 2.468015 AGCTTTCCAGGGAGCTTCA 58.532 52.632 11.35 0.00 46.55 3.02
593 594 0.912486 TTAGGAGCTTTCCAGGGAGC 59.088 55.000 7.47 7.47 39.17 4.70
594 595 2.356227 GGTTTAGGAGCTTTCCAGGGAG 60.356 54.545 0.00 0.00 0.00 4.30
595 596 1.633945 GGTTTAGGAGCTTTCCAGGGA 59.366 52.381 0.00 0.00 0.00 4.20
596 597 1.679032 CGGTTTAGGAGCTTTCCAGGG 60.679 57.143 0.00 0.00 0.00 4.45
597 598 1.003233 ACGGTTTAGGAGCTTTCCAGG 59.997 52.381 0.00 0.00 0.00 4.45
598 599 2.028020 AGACGGTTTAGGAGCTTTCCAG 60.028 50.000 0.00 0.00 0.00 3.86
599 600 1.975680 AGACGGTTTAGGAGCTTTCCA 59.024 47.619 0.00 0.00 0.00 3.53
600 601 2.619147 GAGACGGTTTAGGAGCTTTCC 58.381 52.381 0.00 0.00 0.00 3.13
601 602 2.260481 CGAGACGGTTTAGGAGCTTTC 58.740 52.381 0.00 0.00 0.00 2.62
602 603 1.067071 CCGAGACGGTTTAGGAGCTTT 60.067 52.381 1.80 0.00 42.73 3.51
603 604 0.531200 CCGAGACGGTTTAGGAGCTT 59.469 55.000 1.80 0.00 42.73 3.74
604 605 2.190756 CCGAGACGGTTTAGGAGCT 58.809 57.895 1.80 0.00 42.73 4.09
605 606 4.808649 CCGAGACGGTTTAGGAGC 57.191 61.111 1.80 0.00 42.73 4.70
615 616 1.570813 TTCTGCAATATGCCGAGACG 58.429 50.000 0.00 0.00 44.23 4.18
616 617 2.939103 AGTTTCTGCAATATGCCGAGAC 59.061 45.455 8.65 8.65 44.23 3.36
617 618 2.938451 CAGTTTCTGCAATATGCCGAGA 59.062 45.455 0.00 0.00 44.23 4.04
618 619 3.329743 CAGTTTCTGCAATATGCCGAG 57.670 47.619 0.00 0.00 44.23 4.63
630 631 1.165907 TGGACTTGGCGCAGTTTCTG 61.166 55.000 10.83 0.00 34.12 3.02
631 632 1.148273 TGGACTTGGCGCAGTTTCT 59.852 52.632 10.83 0.00 0.00 2.52
632 633 1.282875 GTGGACTTGGCGCAGTTTC 59.717 57.895 10.83 0.00 0.00 2.78
633 634 2.193536 GGTGGACTTGGCGCAGTTT 61.194 57.895 10.83 0.00 0.00 2.66
634 635 2.594592 GGTGGACTTGGCGCAGTT 60.595 61.111 10.83 0.00 0.00 3.16
635 636 4.988598 CGGTGGACTTGGCGCAGT 62.989 66.667 10.83 4.50 0.00 4.40
636 637 4.988598 ACGGTGGACTTGGCGCAG 62.989 66.667 10.83 0.19 0.00 5.18
640 641 4.643387 AGGCACGGTGGACTTGGC 62.643 66.667 10.60 0.00 36.09 4.52
641 642 2.113139 AAGGCACGGTGGACTTGG 59.887 61.111 10.60 0.00 0.00 3.61
642 643 2.908073 GCAAGGCACGGTGGACTTG 61.908 63.158 16.78 16.78 42.31 3.16
643 644 2.594592 GCAAGGCACGGTGGACTT 60.595 61.111 10.60 1.65 0.00 3.01
644 645 4.988598 CGCAAGGCACGGTGGACT 62.989 66.667 10.60 0.00 0.00 3.85
645 646 4.980805 TCGCAAGGCACGGTGGAC 62.981 66.667 10.60 0.00 38.47 4.02
646 647 4.980805 GTCGCAAGGCACGGTGGA 62.981 66.667 10.60 0.00 45.31 4.02
660 661 1.548973 GAATGTAGATGCGGCCGTCG 61.549 60.000 28.70 0.72 42.76 5.12
661 662 0.529773 TGAATGTAGATGCGGCCGTC 60.530 55.000 28.70 17.76 0.00 4.79
662 663 0.810031 GTGAATGTAGATGCGGCCGT 60.810 55.000 28.70 7.71 0.00 5.68
663 664 0.530650 AGTGAATGTAGATGCGGCCG 60.531 55.000 24.05 24.05 0.00 6.13
664 665 1.668419 AAGTGAATGTAGATGCGGCC 58.332 50.000 0.00 0.00 0.00 6.13
665 666 2.677836 TCAAAGTGAATGTAGATGCGGC 59.322 45.455 0.00 0.00 0.00 6.53
666 667 4.024556 GGATCAAAGTGAATGTAGATGCGG 60.025 45.833 0.00 0.00 0.00 5.69
667 668 4.813161 AGGATCAAAGTGAATGTAGATGCG 59.187 41.667 0.00 0.00 0.00 4.73
668 669 5.587844 ACAGGATCAAAGTGAATGTAGATGC 59.412 40.000 0.00 0.00 0.00 3.91
669 670 6.259608 GGACAGGATCAAAGTGAATGTAGATG 59.740 42.308 0.00 0.00 0.00 2.90
670 671 6.352516 GGACAGGATCAAAGTGAATGTAGAT 58.647 40.000 0.00 0.00 0.00 1.98
671 672 5.624509 CGGACAGGATCAAAGTGAATGTAGA 60.625 44.000 0.00 0.00 0.00 2.59
672 673 4.568359 CGGACAGGATCAAAGTGAATGTAG 59.432 45.833 0.00 0.00 0.00 2.74
673 674 4.503910 CGGACAGGATCAAAGTGAATGTA 58.496 43.478 0.00 0.00 0.00 2.29
674 675 3.338249 CGGACAGGATCAAAGTGAATGT 58.662 45.455 0.00 0.00 0.00 2.71
675 676 2.679837 CCGGACAGGATCAAAGTGAATG 59.320 50.000 0.00 0.00 45.00 2.67
676 677 2.941415 GCCGGACAGGATCAAAGTGAAT 60.941 50.000 5.05 0.00 45.00 2.57
677 678 1.610624 GCCGGACAGGATCAAAGTGAA 60.611 52.381 5.05 0.00 45.00 3.18
678 679 0.036388 GCCGGACAGGATCAAAGTGA 60.036 55.000 5.05 0.00 45.00 3.41
679 680 0.036010 AGCCGGACAGGATCAAAGTG 60.036 55.000 5.05 0.00 45.00 3.16
680 681 0.693049 AAGCCGGACAGGATCAAAGT 59.307 50.000 5.05 0.00 45.00 2.66
681 682 1.373570 GAAGCCGGACAGGATCAAAG 58.626 55.000 5.05 0.00 45.00 2.77
682 683 0.035439 GGAAGCCGGACAGGATCAAA 60.035 55.000 5.05 0.00 45.00 2.69
683 684 1.602237 GGAAGCCGGACAGGATCAA 59.398 57.895 5.05 0.00 45.00 2.57
684 685 2.367202 GGGAAGCCGGACAGGATCA 61.367 63.158 5.05 0.00 45.00 2.92
685 686 2.506472 GGGAAGCCGGACAGGATC 59.494 66.667 5.05 0.00 45.00 3.36
686 687 3.090532 GGGGAAGCCGGACAGGAT 61.091 66.667 5.05 0.00 45.00 3.24
689 690 4.148825 CTCGGGGAAGCCGGACAG 62.149 72.222 5.05 0.00 0.00 3.51
691 692 4.452733 CACTCGGGGAAGCCGGAC 62.453 72.222 5.05 0.00 0.00 4.79
694 695 3.470888 ATCCACTCGGGGAAGCCG 61.471 66.667 0.00 0.00 41.12 5.52
695 696 2.190578 CATCCACTCGGGGAAGCC 59.809 66.667 0.00 0.00 41.12 4.35
696 697 2.190578 CCATCCACTCGGGGAAGC 59.809 66.667 0.00 0.00 41.12 3.86
697 698 2.190578 GCCATCCACTCGGGGAAG 59.809 66.667 0.00 0.00 41.12 3.46
698 699 3.407967 GGCCATCCACTCGGGGAA 61.408 66.667 0.00 0.00 41.12 3.97
701 702 2.813226 TTTTCGGCCATCCACTCGGG 62.813 60.000 2.24 0.00 38.37 5.14
702 703 1.376683 TTTTCGGCCATCCACTCGG 60.377 57.895 2.24 0.00 0.00 4.63
703 704 0.953471 TGTTTTCGGCCATCCACTCG 60.953 55.000 2.24 0.00 0.00 4.18
704 705 1.200020 CTTGTTTTCGGCCATCCACTC 59.800 52.381 2.24 0.00 0.00 3.51
705 706 1.247567 CTTGTTTTCGGCCATCCACT 58.752 50.000 2.24 0.00 0.00 4.00
706 707 0.388520 GCTTGTTTTCGGCCATCCAC 60.389 55.000 2.24 0.00 0.00 4.02
707 708 1.531739 GGCTTGTTTTCGGCCATCCA 61.532 55.000 2.24 0.00 44.69 3.41
708 709 1.215382 GGCTTGTTTTCGGCCATCC 59.785 57.895 2.24 0.00 44.69 3.51
709 710 1.215382 GGGCTTGTTTTCGGCCATC 59.785 57.895 2.24 0.00 46.87 3.51
710 711 3.376546 GGGCTTGTTTTCGGCCAT 58.623 55.556 2.24 0.00 46.87 4.40
712 713 2.200337 ACTGGGCTTGTTTTCGGCC 61.200 57.895 0.00 0.00 45.34 6.13
833 836 3.197766 ACACGGATCACAACATGGTCTAT 59.802 43.478 0.00 0.00 38.64 1.98
837 840 1.610624 GGACACGGATCACAACATGGT 60.611 52.381 0.00 0.00 0.00 3.55
846 849 1.374125 CAACGCTGGACACGGATCA 60.374 57.895 0.00 0.00 34.00 2.92
969 2186 1.346062 GATGGAGGCTGGAGCTCATA 58.654 55.000 17.19 2.65 41.70 2.15
972 2189 1.145819 GTGATGGAGGCTGGAGCTC 59.854 63.158 4.71 4.71 41.70 4.09
976 2193 1.126488 GATCAGTGATGGAGGCTGGA 58.874 55.000 11.20 0.00 0.00 3.86
980 2197 3.471680 GTTAAGGATCAGTGATGGAGGC 58.528 50.000 11.20 0.00 0.00 4.70
1010 2231 0.752658 TGGCTACTATCGCATGCACT 59.247 50.000 19.57 6.36 0.00 4.40
1021 2246 0.397957 TTGGGATCGGCTGGCTACTA 60.398 55.000 0.00 0.00 0.00 1.82
1055 2281 2.636412 CGTGAGCAGGAAGGGACGA 61.636 63.158 0.00 0.00 0.00 4.20
1056 2282 2.125912 CGTGAGCAGGAAGGGACG 60.126 66.667 0.00 0.00 0.00 4.79
1443 2672 2.261671 GACGCGGAGGAGCTTCAA 59.738 61.111 12.47 0.00 35.74 2.69
1528 2757 1.817099 CTGAGGAGCGTGGCATTCC 60.817 63.158 7.36 7.36 0.00 3.01
1769 2998 0.108424 CTTGGAGCTCGTTGGAGAGG 60.108 60.000 7.83 0.00 43.27 3.69
1838 3067 2.268022 GAGGAAGTCGAGGACTGCA 58.732 57.895 6.12 0.00 42.59 4.41
2156 3385 2.365635 ATGTGCCTAGCCCTCGGT 60.366 61.111 0.00 0.00 0.00 4.69
2263 3492 4.910585 CCGTAGATGGTGGCGGCC 62.911 72.222 13.32 13.32 37.69 6.13
2846 4076 3.631686 ACTGCTGACTTGCACACAATTTA 59.368 39.130 0.00 0.00 38.12 1.40
2945 4175 3.415212 TCCTCTCTGCAAAATCAAGGTG 58.585 45.455 0.00 0.00 0.00 4.00
2975 4205 1.194781 ACCGACAATGCCTCCTCTGT 61.195 55.000 0.00 0.00 0.00 3.41
3022 4253 0.959553 TTCTCTCTCGTCGTTGCCTT 59.040 50.000 0.00 0.00 0.00 4.35
3039 4270 2.747855 CTCCAGCCGCCCAACTTC 60.748 66.667 0.00 0.00 0.00 3.01
3065 4296 9.236006 TGTAAGTCGACTATATATAAGAACCCC 57.764 37.037 20.39 0.00 0.00 4.95
3071 4302 9.363763 TCCTCGTGTAAGTCGACTATATATAAG 57.636 37.037 20.39 8.59 33.71 1.73
3072 4303 9.710900 TTCCTCGTGTAAGTCGACTATATATAA 57.289 33.333 20.39 3.02 33.71 0.98
3074 4305 8.613060 TTTCCTCGTGTAAGTCGACTATATAT 57.387 34.615 20.39 5.08 33.71 0.86
3117 4348 8.116753 CGATAAATTCTTTTAGTGCAAGTCGAT 58.883 33.333 0.00 0.00 31.07 3.59
3158 4389 2.225547 ACAGGGCCTAAGAGGTTGACTA 60.226 50.000 5.28 0.00 37.80 2.59
3159 4390 1.280457 CAGGGCCTAAGAGGTTGACT 58.720 55.000 5.28 0.00 37.80 3.41
3182 4413 7.146648 TGTATTTAAAACGAAAATGGTGACCC 58.853 34.615 0.00 0.00 0.00 4.46
3252 4483 3.985925 GCACCTTTCTTTGAGCAATTCTG 59.014 43.478 0.00 0.00 0.00 3.02
3321 4552 7.447853 TGGTTGTAAAATAATACGGAGGTGTTT 59.552 33.333 0.00 0.00 0.00 2.83
3741 4972 4.469657 ACATGTTTGGTTGTACTGGTGAT 58.530 39.130 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.