Multiple sequence alignment - TraesCS6B01G180000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G180000 chr6B 100.000 2249 0 0 1 2249 200007721 200009969 0.000000e+00 4154
1 TraesCS6B01G180000 chr6B 87.446 231 27 2 651 879 528285862 528286092 4.760000e-67 265
2 TraesCS6B01G180000 chr6A 88.598 2254 118 56 85 2249 135560396 135562599 0.000000e+00 2610
3 TraesCS6B01G180000 chr6A 89.372 207 21 1 674 879 492283913 492284119 2.220000e-65 259
4 TraesCS6B01G180000 chr6A 87.736 106 6 2 2 101 135560284 135560388 1.410000e-22 117
5 TraesCS6B01G180000 chr6D 89.876 1531 79 34 6 1492 111061181 111062679 0.000000e+00 1899
6 TraesCS6B01G180000 chr6D 92.730 729 16 12 1551 2249 111062672 111063393 0.000000e+00 1018
7 TraesCS6B01G180000 chr6D 88.785 214 23 1 667 879 351137583 351137370 6.160000e-66 261
8 TraesCS6B01G180000 chr7D 91.111 360 30 2 968 1326 593370339 593369981 9.340000e-134 486
9 TraesCS6B01G180000 chr7D 92.202 218 17 0 674 891 593371078 593370861 2.170000e-80 309
10 TraesCS6B01G180000 chr7B 90.000 360 34 2 968 1326 667479575 667479933 4.370000e-127 464
11 TraesCS6B01G180000 chr7B 92.857 210 14 1 671 879 667478747 667478956 1.010000e-78 303
12 TraesCS6B01G180000 chr7A 89.972 359 36 0 968 1326 686156681 686156323 4.370000e-127 464
13 TraesCS6B01G180000 chr7A 93.720 207 13 0 673 879 686157465 686157259 6.030000e-81 311
14 TraesCS6B01G180000 chr2D 79.666 359 61 11 968 1320 92920168 92920520 4.800000e-62 248
15 TraesCS6B01G180000 chr2A 78.830 359 64 11 968 1320 90596093 90596445 4.830000e-57 231
16 TraesCS6B01G180000 chr2B 78.333 360 64 13 968 1320 144432994 144433346 1.050000e-53 220


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G180000 chr6B 200007721 200009969 2248 False 4154.0 4154 100.0000 1 2249 1 chr6B.!!$F1 2248
1 TraesCS6B01G180000 chr6A 135560284 135562599 2315 False 1363.5 2610 88.1670 2 2249 2 chr6A.!!$F2 2247
2 TraesCS6B01G180000 chr6D 111061181 111063393 2212 False 1458.5 1899 91.3030 6 2249 2 chr6D.!!$F1 2243
3 TraesCS6B01G180000 chr7D 593369981 593371078 1097 True 397.5 486 91.6565 674 1326 2 chr7D.!!$R1 652
4 TraesCS6B01G180000 chr7B 667478747 667479933 1186 False 383.5 464 91.4285 671 1326 2 chr7B.!!$F1 655
5 TraesCS6B01G180000 chr7A 686156323 686157465 1142 True 387.5 464 91.8460 673 1326 2 chr7A.!!$R1 653

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
631 703 0.82346 CAAGTGTGGGCTGGTTGTTT 59.177 50.0 0.0 0.0 0.0 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1848 2539 0.391597 TCCGAGCTCTGTTTCCGTTT 59.608 50.0 12.85 0.0 0.0 3.6 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 132 1.271379 CCCAAGAACGTGGAGTGGAAT 60.271 52.381 8.24 0.00 41.65 3.01
102 133 1.806542 CCAAGAACGTGGAGTGGAATG 59.193 52.381 0.71 0.00 41.65 2.67
176 209 2.557924 CAAGCCAATGGACAGCAACTTA 59.442 45.455 2.05 0.00 0.00 2.24
189 222 5.302360 ACAGCAACTTATTTCCACGAAGTA 58.698 37.500 0.00 0.00 41.61 2.24
190 223 5.408604 ACAGCAACTTATTTCCACGAAGTAG 59.591 40.000 0.00 0.00 41.61 2.57
194 227 4.901868 ACTTATTTCCACGAAGTAGCCAA 58.098 39.130 0.00 0.00 41.61 4.52
195 228 5.497474 ACTTATTTCCACGAAGTAGCCAAT 58.503 37.500 0.00 0.00 41.61 3.16
196 229 5.354234 ACTTATTTCCACGAAGTAGCCAATG 59.646 40.000 0.00 0.00 41.61 2.82
197 230 2.107950 TTCCACGAAGTAGCCAATGG 57.892 50.000 0.00 0.00 41.61 3.16
198 231 1.271856 TCCACGAAGTAGCCAATGGA 58.728 50.000 2.05 0.00 41.61 3.41
199 232 1.066430 TCCACGAAGTAGCCAATGGAC 60.066 52.381 2.05 0.00 41.61 4.02
200 233 1.338674 CCACGAAGTAGCCAATGGACA 60.339 52.381 2.05 0.00 41.61 4.02
201 234 2.002586 CACGAAGTAGCCAATGGACAG 58.997 52.381 2.05 0.00 41.61 3.51
214 254 4.184629 CAATGGACAGCAACTAGTAGGAC 58.815 47.826 0.00 0.00 0.00 3.85
242 282 8.084684 ACAGATCAGCTTATTTTCCTTTTTGTC 58.915 33.333 0.00 0.00 0.00 3.18
243 283 7.543520 CAGATCAGCTTATTTTCCTTTTTGTCC 59.456 37.037 0.00 0.00 0.00 4.02
290 334 4.038763 ACGAAGTTGTGATGAGGACAGTTA 59.961 41.667 0.00 0.00 37.78 2.24
320 371 3.381272 ACGGGCCAACATATGATTTTCTG 59.619 43.478 10.38 3.91 0.00 3.02
321 372 3.721035 GGGCCAACATATGATTTTCTGC 58.279 45.455 10.38 2.11 0.00 4.26
332 383 9.331282 ACATATGATTTTCTGCTTAGAACTACC 57.669 33.333 10.38 0.00 0.00 3.18
371 425 1.112916 TCAGGTGAGAACCAGACGCA 61.113 55.000 0.00 0.00 0.00 5.24
511 572 3.600388 AGTAGTTGCAACCTATGTGCTC 58.400 45.455 25.62 6.25 0.00 4.26
544 608 1.852067 AAGTTTGTCCACATCGCCGC 61.852 55.000 0.00 0.00 0.00 6.53
579 643 2.866010 GCCAAACGCGCAAACCAAC 61.866 57.895 5.73 0.00 0.00 3.77
628 700 3.447040 CCAAGTGTGGGCTGGTTG 58.553 61.111 0.00 0.00 41.77 3.77
629 701 1.455587 CCAAGTGTGGGCTGGTTGT 60.456 57.895 0.00 0.00 41.77 3.32
630 702 1.042559 CCAAGTGTGGGCTGGTTGTT 61.043 55.000 0.00 0.00 41.77 2.83
631 703 0.823460 CAAGTGTGGGCTGGTTGTTT 59.177 50.000 0.00 0.00 0.00 2.83
634 706 1.039856 GTGTGGGCTGGTTGTTTCAT 58.960 50.000 0.00 0.00 0.00 2.57
640 712 1.602191 GCTGGTTGTTTCATAACGCG 58.398 50.000 3.53 3.53 37.06 6.01
661 744 3.364023 CGAAGCCAAGAAAGTACGTAGTG 59.636 47.826 3.10 0.00 45.73 2.74
662 745 2.685100 AGCCAAGAAAGTACGTAGTGC 58.315 47.619 3.10 1.91 45.73 4.40
693 776 4.414337 AGTACCTTTCATGATCTGCTCC 57.586 45.455 0.00 0.00 0.00 4.70
766 849 1.586564 GGGTCGACGATCTTGAGCG 60.587 63.158 9.92 6.74 32.12 5.03
892 1417 1.008995 CCCTGAAACCAAACGCACG 60.009 57.895 0.00 0.00 0.00 5.34
893 1418 1.657181 CCTGAAACCAAACGCACGC 60.657 57.895 0.00 0.00 0.00 5.34
949 1482 0.951040 CGGACAGACAGAAGCAACCC 60.951 60.000 0.00 0.00 0.00 4.11
1017 1678 2.437359 ATGAAGGCGTCCTGCAGC 60.437 61.111 8.66 0.00 43.35 5.25
1333 1994 1.340991 CCCCGTCCACCTGAAAATCAT 60.341 52.381 0.00 0.00 0.00 2.45
1336 1997 3.282021 CCGTCCACCTGAAAATCATCAT 58.718 45.455 0.00 0.00 0.00 2.45
1359 2026 9.687210 TCATCATTTCATCAGAACAAGAAAAAG 57.313 29.630 0.00 0.00 34.13 2.27
1360 2027 8.922676 CATCATTTCATCAGAACAAGAAAAAGG 58.077 33.333 0.00 0.00 34.13 3.11
1361 2028 8.010733 TCATTTCATCAGAACAAGAAAAAGGT 57.989 30.769 0.00 0.00 34.13 3.50
1362 2029 8.477256 TCATTTCATCAGAACAAGAAAAAGGTT 58.523 29.630 0.00 0.00 34.13 3.50
1363 2030 8.758715 CATTTCATCAGAACAAGAAAAAGGTTC 58.241 33.333 0.00 0.00 40.84 3.62
1365 2032 8.746052 TTCATCAGAACAAGAAAAAGGTTCTA 57.254 30.769 6.01 0.00 46.89 2.10
1368 2036 7.553881 TCAGAACAAGAAAAAGGTTCTACTG 57.446 36.000 6.01 0.00 46.89 2.74
1438 2107 1.005037 TCAGCACGAATCTTGGCGT 60.005 52.632 0.00 0.00 42.11 5.68
1445 2114 1.234615 CGAATCTTGGCGTGTGGGTT 61.235 55.000 0.00 0.00 0.00 4.11
1453 2122 1.288127 GCGTGTGGGTTAGACTCGT 59.712 57.895 0.00 0.00 33.87 4.18
1454 2123 0.319297 GCGTGTGGGTTAGACTCGTT 60.319 55.000 0.00 0.00 33.87 3.85
1457 2126 2.544277 CGTGTGGGTTAGACTCGTTCAA 60.544 50.000 0.00 0.00 0.00 2.69
1519 2188 5.366768 ACCGTATACTACTACTACCAGTGGA 59.633 44.000 18.40 0.00 31.87 4.02
1528 2197 3.782656 ACTACCAGTGGACGGATTTTT 57.217 42.857 18.40 0.00 0.00 1.94
1641 2324 0.773644 ACTTGATTGGCACCCAGAGT 59.226 50.000 0.00 0.00 33.81 3.24
1668 2351 3.638160 ACCACGCGGAGGAAAATAGTATA 59.362 43.478 24.06 0.00 35.59 1.47
1669 2352 4.099881 ACCACGCGGAGGAAAATAGTATAA 59.900 41.667 24.06 0.00 35.59 0.98
1670 2353 5.221581 ACCACGCGGAGGAAAATAGTATAAT 60.222 40.000 24.06 0.00 35.59 1.28
1671 2354 6.015180 ACCACGCGGAGGAAAATAGTATAATA 60.015 38.462 24.06 0.00 35.59 0.98
1672 2355 7.039882 CCACGCGGAGGAAAATAGTATAATAT 58.960 38.462 12.47 0.00 0.00 1.28
1702 2385 4.436998 CGACAGGTGGGTCCGAGC 62.437 72.222 0.00 0.00 41.99 5.03
1717 2402 1.659491 CCGAGCAGTATACGCGTACAG 60.659 57.143 23.19 10.76 0.00 2.74
1838 2529 4.715523 CGTTGACCCGGGCATGGT 62.716 66.667 24.08 0.00 39.32 3.55
1847 2538 0.466007 CCGGGCATGGTGAATGATCA 60.466 55.000 0.00 0.00 38.72 2.92
1848 2539 1.391577 CGGGCATGGTGAATGATCAA 58.608 50.000 0.00 0.00 38.72 2.57
1884 2575 0.394565 GGAGCAGAGGAATGGCGTAT 59.605 55.000 0.00 0.00 0.00 3.06
2213 2924 1.765074 GGTGTAGAAGGGGTTGGCA 59.235 57.895 0.00 0.00 0.00 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.775854 CTTAGCAGACCAGTAGTAATAGTAGTA 57.224 37.037 0.00 0.00 0.00 1.82
3 4 7.720515 CCTTAGCAGACCAGTAGTAATAGTAGT 59.279 40.741 0.00 0.00 0.00 2.73
4 5 7.720515 ACCTTAGCAGACCAGTAGTAATAGTAG 59.279 40.741 0.00 0.00 0.00 2.57
7 8 6.963083 ACCTTAGCAGACCAGTAGTAATAG 57.037 41.667 0.00 0.00 0.00 1.73
176 209 3.016736 CCATTGGCTACTTCGTGGAAAT 58.983 45.455 0.00 0.00 0.00 2.17
189 222 1.352352 ACTAGTTGCTGTCCATTGGCT 59.648 47.619 0.00 0.00 0.00 4.75
190 223 1.826385 ACTAGTTGCTGTCCATTGGC 58.174 50.000 0.00 0.00 0.00 4.52
194 227 3.714144 AGTCCTACTAGTTGCTGTCCAT 58.286 45.455 0.00 0.00 0.00 3.41
195 228 3.170991 AGTCCTACTAGTTGCTGTCCA 57.829 47.619 0.00 0.00 0.00 4.02
196 229 4.015084 TGTAGTCCTACTAGTTGCTGTCC 58.985 47.826 0.00 0.00 37.00 4.02
197 230 4.942483 TCTGTAGTCCTACTAGTTGCTGTC 59.058 45.833 0.00 0.00 37.00 3.51
198 231 4.919793 TCTGTAGTCCTACTAGTTGCTGT 58.080 43.478 0.00 0.00 37.00 4.40
199 232 5.590663 TGATCTGTAGTCCTACTAGTTGCTG 59.409 44.000 0.00 0.00 37.00 4.41
200 233 5.756918 TGATCTGTAGTCCTACTAGTTGCT 58.243 41.667 0.00 0.00 37.00 3.91
201 234 5.506649 GCTGATCTGTAGTCCTACTAGTTGC 60.507 48.000 0.00 0.00 37.00 4.17
214 254 9.565213 CAAAAAGGAAAATAAGCTGATCTGTAG 57.435 33.333 1.27 0.00 0.00 2.74
252 292 6.021468 CACAACTTCGTCAAAACAACTTCATC 60.021 38.462 0.00 0.00 0.00 2.92
253 293 5.799936 CACAACTTCGTCAAAACAACTTCAT 59.200 36.000 0.00 0.00 0.00 2.57
254 294 5.049336 TCACAACTTCGTCAAAACAACTTCA 60.049 36.000 0.00 0.00 0.00 3.02
255 295 5.387279 TCACAACTTCGTCAAAACAACTTC 58.613 37.500 0.00 0.00 0.00 3.01
256 296 5.365403 TCACAACTTCGTCAAAACAACTT 57.635 34.783 0.00 0.00 0.00 2.66
257 297 5.123186 TCATCACAACTTCGTCAAAACAACT 59.877 36.000 0.00 0.00 0.00 3.16
260 300 4.035091 CCTCATCACAACTTCGTCAAAACA 59.965 41.667 0.00 0.00 0.00 2.83
263 303 3.807622 GTCCTCATCACAACTTCGTCAAA 59.192 43.478 0.00 0.00 0.00 2.69
264 304 3.181470 TGTCCTCATCACAACTTCGTCAA 60.181 43.478 0.00 0.00 0.00 3.18
265 305 2.364002 TGTCCTCATCACAACTTCGTCA 59.636 45.455 0.00 0.00 0.00 4.35
266 306 2.989840 CTGTCCTCATCACAACTTCGTC 59.010 50.000 0.00 0.00 0.00 4.20
267 307 2.365617 ACTGTCCTCATCACAACTTCGT 59.634 45.455 0.00 0.00 0.00 3.85
268 308 3.032017 ACTGTCCTCATCACAACTTCG 57.968 47.619 0.00 0.00 0.00 3.79
290 334 2.507407 ATGTTGGCCCGTTCTATGTT 57.493 45.000 0.00 0.00 0.00 2.71
320 371 2.498078 AGCTGACCTGGTAGTTCTAAGC 59.502 50.000 0.00 1.05 0.00 3.09
321 372 3.511934 ACAGCTGACCTGGTAGTTCTAAG 59.488 47.826 23.35 0.00 46.14 2.18
371 425 1.067295 TGGATGAGCAACCCAAGACT 58.933 50.000 0.00 0.00 0.00 3.24
488 549 4.759782 AGCACATAGGTTGCAACTACTAG 58.240 43.478 27.64 16.34 0.00 2.57
511 572 3.839293 ACAAACTTGCTACTCTCGCTAG 58.161 45.455 0.00 0.00 36.53 3.42
568 632 4.999939 CCGCCTGTTGGTTTGCGC 63.000 66.667 0.00 0.00 45.28 6.09
622 694 3.479006 CTTCGCGTTATGAAACAACCAG 58.521 45.455 5.77 0.00 35.16 4.00
628 700 2.158841 TCTTGGCTTCGCGTTATGAAAC 59.841 45.455 5.77 0.00 0.00 2.78
629 701 2.418692 TCTTGGCTTCGCGTTATGAAA 58.581 42.857 5.77 0.00 0.00 2.69
630 702 2.087501 TCTTGGCTTCGCGTTATGAA 57.912 45.000 5.77 0.00 0.00 2.57
631 703 2.087501 TTCTTGGCTTCGCGTTATGA 57.912 45.000 5.77 0.00 0.00 2.15
634 706 1.873698 ACTTTCTTGGCTTCGCGTTA 58.126 45.000 5.77 0.00 0.00 3.18
640 712 3.123116 GCACTACGTACTTTCTTGGCTTC 59.877 47.826 0.00 0.00 0.00 3.86
658 741 2.890814 AGGTACTACCAACTCTGCACT 58.109 47.619 8.01 0.00 41.95 4.40
659 742 3.679824 AAGGTACTACCAACTCTGCAC 57.320 47.619 8.01 0.00 41.95 4.57
660 743 3.644265 TGAAAGGTACTACCAACTCTGCA 59.356 43.478 8.01 0.00 41.95 4.41
661 744 4.267349 TGAAAGGTACTACCAACTCTGC 57.733 45.455 8.01 0.00 41.95 4.26
662 745 6.037786 TCATGAAAGGTACTACCAACTCTG 57.962 41.667 8.01 0.46 41.95 3.35
693 776 2.356793 GAGATCTGCATCCGCGGG 60.357 66.667 27.83 11.74 45.28 6.13
917 1442 0.460109 CTGTCCGTCGATGGCAATGA 60.460 55.000 19.40 0.00 0.00 2.57
918 1443 0.460109 TCTGTCCGTCGATGGCAATG 60.460 55.000 19.40 9.32 0.00 2.82
949 1482 1.203928 GTCTGTCCGCTTGATGATCG 58.796 55.000 0.00 0.00 0.00 3.69
1333 1994 9.687210 CTTTTTCTTGTTCTGATGAAATGATGA 57.313 29.630 0.00 0.00 33.52 2.92
1336 1997 8.010733 ACCTTTTTCTTGTTCTGATGAAATGA 57.989 30.769 0.00 0.00 33.52 2.57
1359 2026 0.105039 CCCTGATCGCCAGTAGAACC 59.895 60.000 4.40 0.00 41.33 3.62
1360 2027 0.530870 GCCCTGATCGCCAGTAGAAC 60.531 60.000 4.40 0.00 41.33 3.01
1361 2028 0.975556 TGCCCTGATCGCCAGTAGAA 60.976 55.000 4.40 0.00 41.33 2.10
1362 2029 1.381191 TGCCCTGATCGCCAGTAGA 60.381 57.895 4.40 0.00 41.33 2.59
1363 2030 1.227380 GTGCCCTGATCGCCAGTAG 60.227 63.158 4.40 0.00 41.33 2.57
1365 2032 2.202236 ATTGTGCCCTGATCGCCAGT 62.202 55.000 4.40 0.00 41.33 4.00
1368 2036 1.729881 GAATTGTGCCCTGATCGCC 59.270 57.895 0.00 0.00 0.00 5.54
1379 2047 5.207768 CAAAGTCAGAGGTTTCGAATTGTG 58.792 41.667 0.00 0.00 0.00 3.33
1380 2048 4.275936 CCAAAGTCAGAGGTTTCGAATTGT 59.724 41.667 0.00 0.00 0.00 2.71
1438 2107 2.547218 GCTTGAACGAGTCTAACCCACA 60.547 50.000 0.00 0.00 0.00 4.17
1445 2114 2.337583 GTGCATGCTTGAACGAGTCTA 58.662 47.619 20.33 0.00 0.00 2.59
1453 2122 2.277591 GGCCAGGTGCATGCTTGAA 61.278 57.895 20.33 0.00 43.89 2.69
1454 2123 2.677524 GGCCAGGTGCATGCTTGA 60.678 61.111 20.33 0.00 43.89 3.02
1457 2126 4.753662 CAGGGCCAGGTGCATGCT 62.754 66.667 20.33 0.00 43.89 3.79
1503 2172 3.272574 TCCGTCCACTGGTAGTAGTAG 57.727 52.381 0.00 0.00 0.00 2.57
1506 2175 4.467198 AAAATCCGTCCACTGGTAGTAG 57.533 45.455 0.00 0.00 0.00 2.57
1528 2197 9.419297 CATGCTTTATTTAGGCTCGTAGTATAA 57.581 33.333 0.00 0.00 0.00 0.98
1533 2203 4.511454 TGCATGCTTTATTTAGGCTCGTAG 59.489 41.667 20.33 0.00 0.00 3.51
1543 2213 2.749076 TCTCGTGCTGCATGCTTTATTT 59.251 40.909 20.33 0.00 43.37 1.40
1641 2324 1.750341 TTTCCTCCGCGTGGTCAGAA 61.750 55.000 16.01 13.16 36.30 3.02
1668 2351 2.769663 TGTCGGTGCCACTTAGGATATT 59.230 45.455 0.00 0.00 41.22 1.28
1669 2352 2.365617 CTGTCGGTGCCACTTAGGATAT 59.634 50.000 0.00 0.00 41.22 1.63
1670 2353 1.754803 CTGTCGGTGCCACTTAGGATA 59.245 52.381 0.00 0.00 41.22 2.59
1671 2354 0.537188 CTGTCGGTGCCACTTAGGAT 59.463 55.000 0.00 0.00 41.22 3.24
1672 2355 1.541310 CCTGTCGGTGCCACTTAGGA 61.541 60.000 0.00 0.00 41.22 2.94
1834 2522 5.010516 TGTTTCCGTTTTGATCATTCACCAT 59.989 36.000 0.00 0.00 0.00 3.55
1838 2529 5.562696 GCTCTGTTTCCGTTTTGATCATTCA 60.563 40.000 0.00 0.00 0.00 2.57
1847 2538 1.202604 TCCGAGCTCTGTTTCCGTTTT 60.203 47.619 12.85 0.00 0.00 2.43
1848 2539 0.391597 TCCGAGCTCTGTTTCCGTTT 59.608 50.000 12.85 0.00 0.00 3.60
1884 2575 4.063967 CGTCGCCCAGCAGGTACA 62.064 66.667 0.00 0.00 38.26 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.