Multiple sequence alignment - TraesCS6B01G179200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G179200 chr6B 100.000 5316 0 0 1 5316 199081852 199076537 0.000000e+00 9817.0
1 TraesCS6B01G179200 chr6B 100.000 364 0 0 5708 6071 199076145 199075782 0.000000e+00 673.0
2 TraesCS6B01G179200 chr6B 80.895 581 93 18 4112 4686 199753598 199753030 5.580000e-120 442.0
3 TraesCS6B01G179200 chr6B 79.403 636 109 18 1165 1786 199756899 199756272 4.350000e-116 429.0
4 TraesCS6B01G179200 chr6B 87.164 335 42 1 3361 3695 199754518 199754185 4.440000e-101 379.0
5 TraesCS6B01G179200 chr6B 75.966 595 114 23 2496 3076 199755693 199755114 4.630000e-71 279.0
6 TraesCS6B01G179200 chr6D 94.957 5176 186 30 150 5316 110753472 110748363 0.000000e+00 8043.0
7 TraesCS6B01G179200 chr6D 81.707 656 100 20 4112 4760 110874261 110873619 4.170000e-146 529.0
8 TraesCS6B01G179200 chr6D 92.023 351 7 6 5729 6071 110748281 110747944 1.980000e-129 473.0
9 TraesCS6B01G179200 chr6D 79.332 629 96 25 1181 1788 110877725 110877110 1.570000e-110 411.0
10 TraesCS6B01G179200 chr6D 86.866 335 43 1 3361 3695 110875502 110875169 2.070000e-99 374.0
11 TraesCS6B01G179200 chr6D 76.279 645 123 22 2448 3076 110876564 110875934 3.530000e-82 316.0
12 TraesCS6B01G179200 chr6A 81.735 657 98 17 4112 4760 135230076 135229434 4.170000e-146 529.0
13 TraesCS6B01G179200 chr6A 79.782 643 100 20 1165 1788 135233245 135232614 2.010000e-119 440.0
14 TraesCS6B01G179200 chr6A 86.866 335 43 1 3361 3695 135231009 135230676 2.070000e-99 374.0
15 TraesCS6B01G179200 chr6A 75.894 643 126 21 2448 3076 135232068 135231441 9.890000e-78 302.0
16 TraesCS6B01G179200 chr6A 96.226 159 6 0 5913 6071 135067665 135067507 1.680000e-65 261.0
17 TraesCS6B01G179200 chr2A 79.772 351 44 15 3361 3686 21341434 21341782 4.730000e-56 230.0
18 TraesCS6B01G179200 chr5A 78.729 362 47 22 3363 3695 299627945 299628305 1.330000e-51 215.0
19 TraesCS6B01G179200 chr5A 82.386 176 31 0 1593 1768 299626447 299626622 2.930000e-33 154.0
20 TraesCS6B01G179200 chr5A 73.490 298 59 16 2448 2740 299626895 299627177 1.800000e-15 95.3
21 TraesCS6B01G179200 chr7A 78.142 366 43 18 3363 3695 46905074 46905435 1.330000e-46 198.0
22 TraesCS6B01G179200 chr7A 72.727 605 117 40 2448 3030 46904025 46904603 6.300000e-35 159.0
23 TraesCS6B01G179200 chr7A 85.135 148 22 0 1593 1740 46903577 46903724 1.050000e-32 152.0
24 TraesCS6B01G179200 chr5B 72.682 604 119 39 2448 3030 6611161 6611739 6.300000e-35 159.0
25 TraesCS6B01G179200 chr5B 81.818 176 32 0 1593 1768 6610713 6610888 1.360000e-31 148.0
26 TraesCS6B01G179200 chr3B 75.251 299 60 11 2448 2742 61538480 61538192 4.940000e-26 130.0
27 TraesCS6B01G179200 chr1D 74.832 298 60 12 2448 2742 420053375 420053660 2.970000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G179200 chr6B 199075782 199081852 6070 True 5245.00 9817 100.00000 1 6071 2 chr6B.!!$R1 6070
1 TraesCS6B01G179200 chr6B 199753030 199756899 3869 True 382.25 442 80.85700 1165 4686 4 chr6B.!!$R2 3521
2 TraesCS6B01G179200 chr6D 110747944 110753472 5528 True 4258.00 8043 93.49000 150 6071 2 chr6D.!!$R1 5921
3 TraesCS6B01G179200 chr6D 110873619 110877725 4106 True 407.50 529 81.04600 1181 4760 4 chr6D.!!$R2 3579
4 TraesCS6B01G179200 chr6A 135229434 135233245 3811 True 411.25 529 81.06925 1165 4760 4 chr6A.!!$R2 3595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
113 114 0.034767 CATGGAGGGCAGCTCAGAAA 60.035 55.000 0.00 0.00 0.00 2.52 F
269 271 0.035458 ACAGCGGCCCATATCTAAGC 59.965 55.000 0.00 0.00 0.00 3.09 F
467 490 0.321210 TGGGTGCGTTGGTCATGTAG 60.321 55.000 0.00 0.00 0.00 2.74 F
520 543 0.322997 TGGGCGATCCGTTGGATTTT 60.323 50.000 0.00 0.00 43.27 1.82 F
1498 1534 0.829182 CTTGCTCCCTTGGTTTGCCT 60.829 55.000 0.00 0.00 35.27 4.75 F
1695 1734 0.846693 GGATGGACCATAGGGCTGTT 59.153 55.000 7.05 0.00 37.90 3.16 F
1808 1847 2.030540 CCACCTCACTTTTCATGCAGTG 60.031 50.000 11.38 11.38 41.65 3.66 F
2508 2559 2.228059 GAAGCATGTGGATGGGATGAG 58.772 52.381 0.00 0.00 0.00 2.90 F
4136 5041 4.679197 TCAGTTGCGCACAATTTGTTATTC 59.321 37.500 11.12 0.00 38.27 1.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1441 1477 0.167470 CAACAACATCCTCAGCTGCG 59.833 55.000 9.47 1.71 0.00 5.18 R
1584 1623 0.452987 CTGCAAGCAACACGCCATAT 59.547 50.000 0.00 0.00 44.04 1.78 R
1594 1633 0.816373 TCAACAGCAACTGCAAGCAA 59.184 45.000 4.22 0.00 45.16 3.91 R
1615 1654 1.271379 CGAAACAGGGGAACCATCAGT 60.271 52.381 0.00 0.00 40.34 3.41 R
2580 2631 3.264193 GCTGGAAGGGGGAAATGAAAAAT 59.736 43.478 0.00 0.00 0.00 1.82 R
3607 3978 6.339730 GGAATATTTTGTTCATGTGCCATCA 58.660 36.000 0.00 0.00 0.00 3.07 R
3806 4419 2.370189 CAGGACAGGAAAAGGAGACTGT 59.630 50.000 0.00 0.00 45.99 3.55 R
4466 5372 2.930682 GCAAGAAGGGTGTCGATCTAAC 59.069 50.000 0.00 0.00 0.00 2.34 R
5286 6196 0.033781 ACCACCGAAATTCGAACCGA 59.966 50.000 17.75 0.00 43.74 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.185350 CATCTTCCGGCGAGCTGT 59.815 61.111 9.30 0.00 0.00 4.40
18 19 1.880340 CATCTTCCGGCGAGCTGTC 60.880 63.158 9.30 0.00 0.00 3.51
19 20 3.082579 ATCTTCCGGCGAGCTGTCC 62.083 63.158 9.30 0.00 0.00 4.02
20 21 3.764466 CTTCCGGCGAGCTGTCCT 61.764 66.667 9.30 0.00 0.00 3.85
21 22 3.997064 CTTCCGGCGAGCTGTCCTG 62.997 68.421 9.30 0.00 0.00 3.86
23 24 4.504916 CCGGCGAGCTGTCCTGAG 62.505 72.222 9.30 0.00 0.00 3.35
24 25 4.504916 CGGCGAGCTGTCCTGAGG 62.505 72.222 0.00 0.00 0.00 3.86
25 26 3.386237 GGCGAGCTGTCCTGAGGT 61.386 66.667 0.00 0.00 0.00 3.85
26 27 2.125753 GCGAGCTGTCCTGAGGTG 60.126 66.667 0.00 0.00 0.00 4.00
27 28 2.640302 GCGAGCTGTCCTGAGGTGA 61.640 63.158 0.00 0.00 0.00 4.02
28 29 1.510383 CGAGCTGTCCTGAGGTGAG 59.490 63.158 0.00 0.00 0.00 3.51
29 30 1.896694 GAGCTGTCCTGAGGTGAGG 59.103 63.158 0.00 0.00 0.00 3.86
30 31 0.902516 GAGCTGTCCTGAGGTGAGGT 60.903 60.000 0.00 0.82 34.36 3.85
31 32 1.190833 AGCTGTCCTGAGGTGAGGTG 61.191 60.000 0.00 0.00 34.36 4.00
32 33 1.978473 CTGTCCTGAGGTGAGGTGG 59.022 63.158 0.00 0.00 34.36 4.61
33 34 0.542938 CTGTCCTGAGGTGAGGTGGA 60.543 60.000 0.00 0.00 34.36 4.02
34 35 0.542938 TGTCCTGAGGTGAGGTGGAG 60.543 60.000 0.00 0.00 34.36 3.86
35 36 0.251832 GTCCTGAGGTGAGGTGGAGA 60.252 60.000 0.00 0.00 34.36 3.71
36 37 0.487325 TCCTGAGGTGAGGTGGAGAA 59.513 55.000 0.00 0.00 34.36 2.87
37 38 0.901124 CCTGAGGTGAGGTGGAGAAG 59.099 60.000 0.00 0.00 0.00 2.85
38 39 0.248843 CTGAGGTGAGGTGGAGAAGC 59.751 60.000 0.00 0.00 0.00 3.86
39 40 1.216710 GAGGTGAGGTGGAGAAGCG 59.783 63.158 0.00 0.00 0.00 4.68
40 41 2.232298 GAGGTGAGGTGGAGAAGCGG 62.232 65.000 0.00 0.00 0.00 5.52
41 42 2.283529 GGTGAGGTGGAGAAGCGGA 61.284 63.158 0.00 0.00 0.00 5.54
42 43 1.671742 GTGAGGTGGAGAAGCGGAA 59.328 57.895 0.00 0.00 0.00 4.30
43 44 0.670854 GTGAGGTGGAGAAGCGGAAC 60.671 60.000 0.00 0.00 0.00 3.62
44 45 1.118965 TGAGGTGGAGAAGCGGAACA 61.119 55.000 0.00 0.00 0.00 3.18
45 46 0.250513 GAGGTGGAGAAGCGGAACAT 59.749 55.000 0.00 0.00 0.00 2.71
46 47 0.693049 AGGTGGAGAAGCGGAACATT 59.307 50.000 0.00 0.00 0.00 2.71
47 48 0.804989 GGTGGAGAAGCGGAACATTG 59.195 55.000 0.00 0.00 0.00 2.82
48 49 1.523758 GTGGAGAAGCGGAACATTGT 58.476 50.000 0.00 0.00 0.00 2.71
49 50 1.464997 GTGGAGAAGCGGAACATTGTC 59.535 52.381 0.00 0.00 0.00 3.18
50 51 0.721718 GGAGAAGCGGAACATTGTCG 59.278 55.000 0.00 0.00 0.00 4.35
51 52 0.721718 GAGAAGCGGAACATTGTCGG 59.278 55.000 0.00 0.00 0.00 4.79
52 53 0.034896 AGAAGCGGAACATTGTCGGT 59.965 50.000 0.00 0.00 36.13 4.69
53 54 0.872388 GAAGCGGAACATTGTCGGTT 59.128 50.000 13.11 13.11 45.25 4.44
54 55 1.265905 GAAGCGGAACATTGTCGGTTT 59.734 47.619 14.06 6.32 43.17 3.27
55 56 2.172851 AGCGGAACATTGTCGGTTTA 57.827 45.000 0.00 0.00 0.00 2.01
56 57 2.706890 AGCGGAACATTGTCGGTTTAT 58.293 42.857 0.00 0.00 0.00 1.40
57 58 2.418628 AGCGGAACATTGTCGGTTTATG 59.581 45.455 0.00 0.00 0.00 1.90
58 59 2.160813 GCGGAACATTGTCGGTTTATGT 59.839 45.455 0.00 0.00 34.14 2.29
59 60 3.726782 GCGGAACATTGTCGGTTTATGTC 60.727 47.826 0.00 0.00 31.63 3.06
60 61 3.181514 CGGAACATTGTCGGTTTATGTCC 60.182 47.826 0.00 0.00 31.63 4.02
71 72 4.313277 GGTTTATGTCCGAGTAGGTACC 57.687 50.000 2.73 2.73 41.99 3.34
72 73 3.068732 GGTTTATGTCCGAGTAGGTACCC 59.931 52.174 8.74 0.00 41.99 3.69
73 74 3.668141 TTATGTCCGAGTAGGTACCCA 57.332 47.619 8.74 0.00 41.99 4.51
74 75 2.769602 ATGTCCGAGTAGGTACCCAT 57.230 50.000 8.74 0.00 41.99 4.00
75 76 3.889859 ATGTCCGAGTAGGTACCCATA 57.110 47.619 8.74 0.00 41.99 2.74
76 77 3.889859 TGTCCGAGTAGGTACCCATAT 57.110 47.619 8.74 0.00 41.99 1.78
77 78 3.493334 TGTCCGAGTAGGTACCCATATG 58.507 50.000 8.74 0.00 41.99 1.78
78 79 3.117398 TGTCCGAGTAGGTACCCATATGT 60.117 47.826 8.74 0.00 41.99 2.29
79 80 3.505293 GTCCGAGTAGGTACCCATATGTC 59.495 52.174 8.74 0.00 41.99 3.06
80 81 2.486982 CCGAGTAGGTACCCATATGTCG 59.513 54.545 8.74 8.79 34.51 4.35
81 82 2.486982 CGAGTAGGTACCCATATGTCGG 59.513 54.545 8.74 0.00 0.00 4.79
82 83 2.230750 GAGTAGGTACCCATATGTCGGC 59.769 54.545 8.74 0.00 0.00 5.54
83 84 1.068055 GTAGGTACCCATATGTCGGCG 60.068 57.143 8.74 0.00 0.00 6.46
84 85 0.468585 AGGTACCCATATGTCGGCGA 60.469 55.000 4.99 4.99 0.00 5.54
85 86 0.319297 GGTACCCATATGTCGGCGAC 60.319 60.000 31.68 31.68 0.00 5.19
86 87 0.386476 GTACCCATATGTCGGCGACA 59.614 55.000 40.35 40.35 46.90 4.35
87 88 1.112950 TACCCATATGTCGGCGACAA 58.887 50.000 41.49 30.07 45.96 3.18
88 89 0.468226 ACCCATATGTCGGCGACAAT 59.532 50.000 41.49 30.75 45.96 2.71
89 90 0.867746 CCCATATGTCGGCGACAATG 59.132 55.000 41.49 36.46 45.96 2.82
90 91 1.581934 CCATATGTCGGCGACAATGT 58.418 50.000 41.49 29.12 45.96 2.71
91 92 1.939934 CCATATGTCGGCGACAATGTT 59.060 47.619 41.49 28.78 45.96 2.71
92 93 2.286359 CCATATGTCGGCGACAATGTTG 60.286 50.000 41.49 31.62 45.96 3.33
93 94 2.371910 TATGTCGGCGACAATGTTGA 57.628 45.000 41.49 20.60 45.96 3.18
94 95 0.796312 ATGTCGGCGACAATGTTGAC 59.204 50.000 41.49 14.43 45.96 3.18
95 96 0.530870 TGTCGGCGACAATGTTGACA 60.531 50.000 37.53 14.10 39.78 3.58
96 97 0.796312 GTCGGCGACAATGTTGACAT 59.204 50.000 33.07 0.00 38.41 3.06
97 98 0.795698 TCGGCGACAATGTTGACATG 59.204 50.000 4.99 0.00 36.56 3.21
98 99 0.179192 CGGCGACAATGTTGACATGG 60.179 55.000 7.33 0.00 36.56 3.66
99 100 1.164411 GGCGACAATGTTGACATGGA 58.836 50.000 4.52 0.00 36.56 3.41
100 101 1.131126 GGCGACAATGTTGACATGGAG 59.869 52.381 4.52 1.08 36.56 3.86
101 102 1.131126 GCGACAATGTTGACATGGAGG 59.869 52.381 4.52 0.00 36.56 4.30
102 103 1.739466 CGACAATGTTGACATGGAGGG 59.261 52.381 5.53 0.00 36.56 4.30
103 104 1.474077 GACAATGTTGACATGGAGGGC 59.526 52.381 5.53 0.00 36.56 5.19
104 105 1.203038 ACAATGTTGACATGGAGGGCA 60.203 47.619 5.53 0.00 36.56 5.36
105 106 1.475280 CAATGTTGACATGGAGGGCAG 59.525 52.381 0.00 0.00 36.56 4.85
106 107 0.682209 ATGTTGACATGGAGGGCAGC 60.682 55.000 0.00 0.00 34.83 5.25
107 108 1.001641 GTTGACATGGAGGGCAGCT 60.002 57.895 0.00 0.00 0.00 4.24
108 109 1.028868 GTTGACATGGAGGGCAGCTC 61.029 60.000 0.00 0.00 0.00 4.09
109 110 1.491274 TTGACATGGAGGGCAGCTCA 61.491 55.000 0.00 0.00 0.00 4.26
110 111 1.153208 GACATGGAGGGCAGCTCAG 60.153 63.158 0.00 0.00 0.00 3.35
111 112 1.614525 ACATGGAGGGCAGCTCAGA 60.615 57.895 0.00 0.00 0.00 3.27
112 113 1.203441 ACATGGAGGGCAGCTCAGAA 61.203 55.000 0.00 0.00 0.00 3.02
113 114 0.034767 CATGGAGGGCAGCTCAGAAA 60.035 55.000 0.00 0.00 0.00 2.52
114 115 0.255318 ATGGAGGGCAGCTCAGAAAG 59.745 55.000 0.00 0.00 0.00 2.62
178 179 3.440415 GCGGCTACAACAAGGGCC 61.440 66.667 0.00 0.00 41.02 5.80
183 184 0.605589 GCTACAACAAGGGCCGACTT 60.606 55.000 0.00 0.00 0.00 3.01
197 199 1.604755 CCGACTTGAGACGATCCCTAG 59.395 57.143 4.54 0.00 35.37 3.02
202 204 2.364972 TGAGACGATCCCTAGCATGA 57.635 50.000 0.00 0.00 0.00 3.07
208 210 1.548809 CGATCCCTAGCATGAGGAGGA 60.549 57.143 0.00 0.00 39.15 3.71
211 213 0.324285 CCCTAGCATGAGGAGGATGC 59.676 60.000 0.00 0.00 45.56 3.91
216 218 0.106819 GCATGAGGAGGATGCCTTGT 60.107 55.000 0.00 0.00 40.37 3.16
248 250 2.125106 GATGGCCTCGGTGTCCAC 60.125 66.667 3.32 0.00 31.94 4.02
258 260 3.660111 GTGTCCACAACAGCGGCC 61.660 66.667 0.00 0.00 38.97 6.13
259 261 4.947147 TGTCCACAACAGCGGCCC 62.947 66.667 0.00 0.00 32.81 5.80
260 262 4.947147 GTCCACAACAGCGGCCCA 62.947 66.667 0.00 0.00 0.00 5.36
261 263 3.965258 TCCACAACAGCGGCCCAT 61.965 61.111 0.00 0.00 0.00 4.00
262 264 2.045438 CCACAACAGCGGCCCATA 60.045 61.111 0.00 0.00 0.00 2.74
263 265 1.453745 CCACAACAGCGGCCCATAT 60.454 57.895 0.00 0.00 0.00 1.78
264 266 1.447317 CCACAACAGCGGCCCATATC 61.447 60.000 0.00 0.00 0.00 1.63
265 267 0.464373 CACAACAGCGGCCCATATCT 60.464 55.000 0.00 0.00 0.00 1.98
266 268 1.128200 ACAACAGCGGCCCATATCTA 58.872 50.000 0.00 0.00 0.00 1.98
267 269 1.488812 ACAACAGCGGCCCATATCTAA 59.511 47.619 0.00 0.00 0.00 2.10
268 270 2.146342 CAACAGCGGCCCATATCTAAG 58.854 52.381 0.00 0.00 0.00 2.18
269 271 0.035458 ACAGCGGCCCATATCTAAGC 59.965 55.000 0.00 0.00 0.00 3.09
270 272 1.016130 CAGCGGCCCATATCTAAGCG 61.016 60.000 0.00 0.00 0.00 4.68
271 273 1.741770 GCGGCCCATATCTAAGCGG 60.742 63.158 0.00 0.00 0.00 5.52
272 274 1.741770 CGGCCCATATCTAAGCGGC 60.742 63.158 0.00 0.00 38.96 6.53
273 275 1.741770 GGCCCATATCTAAGCGGCG 60.742 63.158 0.51 0.51 40.67 6.46
274 276 1.741770 GCCCATATCTAAGCGGCGG 60.742 63.158 9.78 0.00 0.00 6.13
275 277 1.671742 CCCATATCTAAGCGGCGGT 59.328 57.895 5.44 5.44 0.00 5.68
276 278 0.892755 CCCATATCTAAGCGGCGGTA 59.107 55.000 13.69 0.00 0.00 4.02
277 279 1.135083 CCCATATCTAAGCGGCGGTAG 60.135 57.143 13.69 10.42 0.00 3.18
278 280 1.630148 CATATCTAAGCGGCGGTAGC 58.370 55.000 13.69 0.00 44.18 3.58
291 293 2.000447 GCGGTAGCAACGATTTCTTCT 59.000 47.619 0.00 0.00 44.35 2.85
300 302 5.973565 AGCAACGATTTCTTCTTTTGTCTTG 59.026 36.000 0.00 0.00 0.00 3.02
305 307 5.239525 CGATTTCTTCTTTTGTCTTGACCCT 59.760 40.000 0.00 0.00 0.00 4.34
307 309 4.086706 TCTTCTTTTGTCTTGACCCTCC 57.913 45.455 0.00 0.00 0.00 4.30
308 310 3.716872 TCTTCTTTTGTCTTGACCCTCCT 59.283 43.478 0.00 0.00 0.00 3.69
309 311 4.166144 TCTTCTTTTGTCTTGACCCTCCTT 59.834 41.667 0.00 0.00 0.00 3.36
310 312 4.519906 TCTTTTGTCTTGACCCTCCTTT 57.480 40.909 0.00 0.00 0.00 3.11
311 313 4.867086 TCTTTTGTCTTGACCCTCCTTTT 58.133 39.130 0.00 0.00 0.00 2.27
313 315 5.359860 TCTTTTGTCTTGACCCTCCTTTTTC 59.640 40.000 0.00 0.00 0.00 2.29
315 317 2.436542 TGTCTTGACCCTCCTTTTTCGA 59.563 45.455 0.00 0.00 0.00 3.71
316 318 3.072476 TGTCTTGACCCTCCTTTTTCGAT 59.928 43.478 0.00 0.00 0.00 3.59
317 319 4.072839 GTCTTGACCCTCCTTTTTCGATT 58.927 43.478 0.00 0.00 0.00 3.34
318 320 4.072131 TCTTGACCCTCCTTTTTCGATTG 58.928 43.478 0.00 0.00 0.00 2.67
319 321 2.790433 TGACCCTCCTTTTTCGATTGG 58.210 47.619 0.00 0.00 0.00 3.16
320 322 2.107552 TGACCCTCCTTTTTCGATTGGT 59.892 45.455 0.00 0.00 0.00 3.67
321 323 2.747989 GACCCTCCTTTTTCGATTGGTC 59.252 50.000 0.00 0.00 34.81 4.02
322 324 2.375509 ACCCTCCTTTTTCGATTGGTCT 59.624 45.455 0.00 0.00 0.00 3.85
326 328 3.486383 TCCTTTTTCGATTGGTCTGCTT 58.514 40.909 0.00 0.00 0.00 3.91
331 333 0.389817 TCGATTGGTCTGCTTCACCG 60.390 55.000 0.00 0.00 36.61 4.94
337 339 1.579932 GTCTGCTTCACCGTCTCGA 59.420 57.895 0.00 0.00 0.00 4.04
388 390 2.359850 GCTTCACCGTGGCCATGA 60.360 61.111 27.13 15.27 0.00 3.07
389 391 1.750399 GCTTCACCGTGGCCATGAT 60.750 57.895 27.13 6.15 0.00 2.45
394 396 2.124612 CCGTGGCCATGATGCAGA 60.125 61.111 27.13 0.00 0.00 4.26
396 398 2.816360 CGTGGCCATGATGCAGACG 61.816 63.158 21.08 5.56 34.00 4.18
403 405 0.458370 CATGATGCAGACGACCACGA 60.458 55.000 0.00 0.00 42.66 4.35
404 406 0.458543 ATGATGCAGACGACCACGAC 60.459 55.000 0.00 0.00 42.66 4.34
430 453 3.680920 TTTTGGCGGGGTGGGTGTT 62.681 57.895 0.00 0.00 0.00 3.32
431 454 3.680920 TTTGGCGGGGTGGGTGTTT 62.681 57.895 0.00 0.00 0.00 2.83
432 455 3.680920 TTGGCGGGGTGGGTGTTTT 62.681 57.895 0.00 0.00 0.00 2.43
433 456 2.840572 GGCGGGGTGGGTGTTTTT 60.841 61.111 0.00 0.00 0.00 1.94
450 473 2.631427 TTTTTAGAACGCGGGGTGG 58.369 52.632 12.47 0.00 0.00 4.61
451 474 0.890090 TTTTTAGAACGCGGGGTGGG 60.890 55.000 12.47 0.00 0.00 4.61
453 476 2.734948 TTTAGAACGCGGGGTGGGTG 62.735 60.000 12.47 0.00 43.99 4.61
467 490 0.321210 TGGGTGCGTTGGTCATGTAG 60.321 55.000 0.00 0.00 0.00 2.74
469 492 1.066716 GGGTGCGTTGGTCATGTAGTA 60.067 52.381 0.00 0.00 0.00 1.82
470 493 2.613474 GGGTGCGTTGGTCATGTAGTAA 60.613 50.000 0.00 0.00 0.00 2.24
492 515 1.198759 TTTTCTAGGACGGGGCTGCT 61.199 55.000 0.00 0.00 0.00 4.24
493 516 1.614241 TTTCTAGGACGGGGCTGCTC 61.614 60.000 0.00 0.00 0.00 4.26
494 517 2.443016 CTAGGACGGGGCTGCTCT 60.443 66.667 0.00 0.00 0.00 4.09
501 524 4.416738 GGGGCTGCTCTTCCGCTT 62.417 66.667 0.00 0.00 33.11 4.68
505 528 3.130160 CTGCTCTTCCGCTTGGGC 61.130 66.667 0.00 0.00 34.94 5.36
520 543 0.322997 TGGGCGATCCGTTGGATTTT 60.323 50.000 0.00 0.00 43.27 1.82
531 554 7.115663 CGATCCGTTGGATTTTACAACATTTTT 59.884 33.333 8.73 0.00 46.41 1.94
533 556 7.493367 TCCGTTGGATTTTACAACATTTTTCT 58.507 30.769 8.73 0.00 46.41 2.52
535 558 7.095816 CCGTTGGATTTTACAACATTTTTCTCC 60.096 37.037 8.73 0.00 46.41 3.71
536 559 7.651704 CGTTGGATTTTACAACATTTTTCTCCT 59.348 33.333 8.73 0.00 46.41 3.69
561 584 4.625972 TTCCCGAGTCAAACACTTTTTC 57.374 40.909 0.00 0.00 34.41 2.29
562 585 3.611970 TCCCGAGTCAAACACTTTTTCA 58.388 40.909 0.00 0.00 34.41 2.69
563 586 4.204012 TCCCGAGTCAAACACTTTTTCAT 58.796 39.130 0.00 0.00 34.41 2.57
571 598 8.118893 AGTCAAACACTTTTTCATTTTCATCG 57.881 30.769 0.00 0.00 26.56 3.84
636 663 3.543680 ACGGATCAGATCAAACCGAAT 57.456 42.857 19.14 0.59 45.31 3.34
646 673 2.656002 TCAAACCGAATCCCAAACACA 58.344 42.857 0.00 0.00 0.00 3.72
649 676 0.887387 ACCGAATCCCAAACACACGG 60.887 55.000 0.00 0.00 43.61 4.94
650 677 0.887387 CCGAATCCCAAACACACGGT 60.887 55.000 0.00 0.00 35.21 4.83
685 712 4.500116 GTGGACGCTCTCCGCCTC 62.500 72.222 0.33 0.00 43.11 4.70
738 765 2.799371 GTCTTCCTCGGCGTCGAT 59.201 61.111 14.65 0.00 45.04 3.59
790 817 4.387256 CGTCACTCTCTGAATCCTTTGAAC 59.613 45.833 0.00 0.00 0.00 3.18
842 869 6.070194 AGCTTTTACTAGATAGACTTTGGCCA 60.070 38.462 0.00 0.00 0.00 5.36
853 880 5.397142 AGACTTTGGCCATTTCTTGATTC 57.603 39.130 6.09 0.00 0.00 2.52
855 882 2.652941 TTGGCCATTTCTTGATTCGC 57.347 45.000 6.09 0.00 0.00 4.70
874 901 2.641912 GCGAGTAGTAATCGAGTGAGC 58.358 52.381 23.00 0.88 42.76 4.26
881 908 2.621055 AGTAATCGAGTGAGCAGGCTAG 59.379 50.000 0.00 0.00 0.00 3.42
884 911 1.226916 CGAGTGAGCAGGCTAGCAG 60.227 63.158 18.24 9.62 36.85 4.24
984 1011 6.151312 TCAAGAGTATCACTAGTTGTCCACTC 59.849 42.308 0.00 2.46 37.82 3.51
1065 1092 3.111838 CTCAATCGTTCTCTCGGATGTG 58.888 50.000 0.00 0.00 0.00 3.21
1067 1094 3.381590 TCAATCGTTCTCTCGGATGTGAT 59.618 43.478 0.00 0.00 0.00 3.06
1085 1112 9.793259 GGATGTGATGAAGGGTAATTTAAGATA 57.207 33.333 0.00 0.00 0.00 1.98
1090 1117 7.719633 TGATGAAGGGTAATTTAAGATAGGTGC 59.280 37.037 0.00 0.00 0.00 5.01
1176 1203 2.723273 AGCAGGTAATTAGGTTGGTGC 58.277 47.619 0.00 0.00 0.00 5.01
1323 1355 5.833406 TCCGTTCAATGTATTGCATGATT 57.167 34.783 0.00 0.00 37.96 2.57
1441 1477 1.265568 CATGCTCGCTTGCAAATGTC 58.734 50.000 0.00 0.00 46.61 3.06
1465 1501 1.457346 CTGAGGATGTTGTTGGCCTC 58.543 55.000 3.32 0.00 45.59 4.70
1474 1510 2.125106 GTTGGCCTCGGATTCGCT 60.125 61.111 3.32 0.00 36.13 4.93
1498 1534 0.829182 CTTGCTCCCTTGGTTTGCCT 60.829 55.000 0.00 0.00 35.27 4.75
1519 1555 4.996122 CCTTGATCTCCATATGAGCTGTTC 59.004 45.833 3.65 0.00 41.18 3.18
1526 1562 3.447229 TCCATATGAGCTGTTCGAGTTGA 59.553 43.478 3.65 0.00 0.00 3.18
1552 1590 5.886609 TCTGAATGGGGAATTTTGTGTCTA 58.113 37.500 0.00 0.00 0.00 2.59
1584 1623 8.258007 ACTCGGAATTCACTGACTTGATAATAA 58.742 33.333 7.93 0.00 0.00 1.40
1585 1624 9.265901 CTCGGAATTCACTGACTTGATAATAAT 57.734 33.333 7.93 0.00 0.00 1.28
1594 1633 7.171508 CACTGACTTGATAATAATATGGCGTGT 59.828 37.037 0.00 0.00 0.00 4.49
1615 1654 2.228925 TGCTTGCAGTTGCTGTTGATA 58.771 42.857 5.62 0.00 42.66 2.15
1695 1734 0.846693 GGATGGACCATAGGGCTGTT 59.153 55.000 7.05 0.00 37.90 3.16
1716 1755 3.531538 TGACCAGGCTGATCGAATTAAC 58.468 45.455 17.94 0.00 0.00 2.01
1808 1847 2.030540 CCACCTCACTTTTCATGCAGTG 60.031 50.000 11.38 11.38 41.65 3.66
1956 1998 4.584325 CCAGGAAATTTCACTTCTTGGTCA 59.416 41.667 19.49 0.00 42.31 4.02
1957 1999 5.244626 CCAGGAAATTTCACTTCTTGGTCAT 59.755 40.000 19.49 0.00 42.31 3.06
1958 2000 6.154445 CAGGAAATTTCACTTCTTGGTCATG 58.846 40.000 19.49 0.00 0.00 3.07
1959 2001 5.835280 AGGAAATTTCACTTCTTGGTCATGT 59.165 36.000 19.49 0.00 0.00 3.21
1962 2004 8.141268 GGAAATTTCACTTCTTGGTCATGTAAA 58.859 33.333 19.49 0.00 0.00 2.01
1963 2005 9.528018 GAAATTTCACTTCTTGGTCATGTAAAA 57.472 29.630 13.40 0.00 0.00 1.52
1972 2014 9.918630 CTTCTTGGTCATGTAAAATCAGAATTT 57.081 29.630 0.00 0.00 36.64 1.82
2008 2050 6.357579 ACCTGGAAATTGCAATGTTCATTA 57.642 33.333 23.54 14.38 0.00 1.90
2055 2097 8.618702 TTAATAAACGTGGACATTGTTTAGGA 57.381 30.769 14.04 6.15 40.28 2.94
2094 2136 8.383318 GATGTTGGTTACAGCATGAATATACT 57.617 34.615 0.00 0.00 46.67 2.12
2508 2559 2.228059 GAAGCATGTGGATGGGATGAG 58.772 52.381 0.00 0.00 0.00 2.90
2578 2629 5.173131 CGTGCAAAAATAGGTTGAACTGAAC 59.827 40.000 0.00 0.00 33.03 3.18
2580 2631 6.533367 GTGCAAAAATAGGTTGAACTGAACAA 59.467 34.615 0.00 0.00 32.54 2.83
2788 2839 6.747659 ATTGCAATGTTTACGTTGAACTTC 57.252 33.333 12.09 1.90 43.62 3.01
3068 3130 9.455847 GTTGATTCATCTGTATTTTTCCTATGC 57.544 33.333 0.00 0.00 0.00 3.14
3607 3978 8.196771 TGAGTTGTTGAACAAGATATTGCTTTT 58.803 29.630 11.54 0.00 39.00 2.27
3747 4119 9.270640 CAAGAATTCTAGTTATCCAGATCCTTG 57.729 37.037 8.75 0.00 0.00 3.61
3789 4402 7.675870 GCAATGTGACACATAAAGATCTCAGAC 60.676 40.741 21.10 0.00 37.97 3.51
3806 4419 7.244886 TCTCAGACTATCAGACCAAATCAAA 57.755 36.000 0.00 0.00 0.00 2.69
4011 4661 7.719778 TGCTGTTCTAATTAGATGTATGCAG 57.280 36.000 15.82 15.59 31.40 4.41
4136 5041 4.679197 TCAGTTGCGCACAATTTGTTATTC 59.321 37.500 11.12 0.00 38.27 1.75
4410 5316 6.178239 ACTTATTTTCGACCAAGGATTTCG 57.822 37.500 0.00 0.00 0.00 3.46
4542 5448 4.392445 GTCCAAGAGCATGCAGATATCATC 59.608 45.833 21.98 5.80 0.00 2.92
4606 5512 0.540923 CTCCTTTCCTCCCTGCTCTG 59.459 60.000 0.00 0.00 0.00 3.35
4609 5518 1.352352 CCTTTCCTCCCTGCTCTGAAA 59.648 52.381 0.00 0.00 0.00 2.69
4629 5538 7.068103 TCTGAAATTTACTTGTTCTTTGCAGGA 59.932 33.333 0.00 0.00 0.00 3.86
4707 5616 1.471327 GGTGCTGTTGCTGCAAAGAAA 60.471 47.619 17.80 0.76 39.78 2.52
4766 5675 1.992557 AGCTGGAAAGGTATGTCCCAA 59.007 47.619 0.00 0.00 36.75 4.12
4834 5744 3.057033 GCCGTTAGACAACCTAGAGAACA 60.057 47.826 0.00 0.00 0.00 3.18
4845 5755 9.817809 GACAACCTAGAGAACATGTTATTCATA 57.182 33.333 11.95 2.71 34.67 2.15
4859 5769 9.859427 CATGTTATTCATAAAATATGCCCGATT 57.141 29.630 0.00 0.00 34.67 3.34
4889 5799 8.385111 GTCCATTTTGATTTGCATACATTCTTG 58.615 33.333 0.00 0.00 0.00 3.02
4971 5881 0.397941 TGCATCCATCTTCGGATCCC 59.602 55.000 6.06 0.00 44.28 3.85
5002 5912 6.560253 AGAAATACCACGATGCCAAATATC 57.440 37.500 0.00 0.00 0.00 1.63
5010 5920 6.372659 ACCACGATGCCAAATATCAGATATTC 59.627 38.462 14.90 5.09 34.50 1.75
5047 5957 0.740149 ACAGCTCTCTCATCGCTCAG 59.260 55.000 0.00 0.00 0.00 3.35
5049 5959 1.300080 GCTCTCTCATCGCTCAGCC 60.300 63.158 0.00 0.00 0.00 4.85
5088 5998 0.966920 AGGGTTACGTGACCACTGAG 59.033 55.000 28.40 0.00 41.65 3.35
5093 6003 1.532604 TACGTGACCACTGAGCTGGG 61.533 60.000 0.00 0.00 35.34 4.45
5144 6054 1.340889 TCTGTTGCCATGTTTCCTTGC 59.659 47.619 0.00 0.00 0.00 4.01
5205 6115 9.277783 GGAAGCAGTGATACAATAATGTCTATT 57.722 33.333 0.00 0.00 41.05 1.73
5242 6152 9.268282 AGTATAGAAAAGGATCCTTTGTAGTGA 57.732 33.333 34.94 19.49 44.50 3.41
5286 6196 8.416329 ACAAAGTTTCTGTGAAATTAGATGCTT 58.584 29.630 0.00 0.00 0.00 3.91
5300 6210 2.348666 AGATGCTTCGGTTCGAATTTCG 59.651 45.455 12.54 12.54 44.85 3.46
5303 6213 1.463528 GCTTCGGTTCGAATTTCGGTG 60.464 52.381 18.02 6.57 44.85 4.94
5756 6666 2.079925 CTGGAAACTCTGTTAGCAGGC 58.920 52.381 6.75 0.00 42.78 4.85
5757 6667 1.699634 TGGAAACTCTGTTAGCAGGCT 59.300 47.619 6.75 0.00 42.78 4.58
5758 6668 2.079925 GGAAACTCTGTTAGCAGGCTG 58.920 52.381 10.94 10.94 42.78 4.85
5759 6669 1.466558 GAAACTCTGTTAGCAGGCTGC 59.533 52.381 31.56 31.56 45.46 5.25
5800 6710 4.023365 GCTGTTTTGCTCTCTTGACAGAAT 60.023 41.667 5.57 0.00 37.32 2.40
5831 6749 4.515567 CCTTTACTCAGAGTTTGTTGGTCC 59.484 45.833 8.80 0.00 0.00 4.46
5882 6800 3.512516 GCCCGGTCAGCAATCTGC 61.513 66.667 0.00 0.00 45.46 4.26
5921 6839 6.023357 ACTGCATGTGTTAACAATGCAATA 57.977 33.333 33.14 22.43 43.63 1.90
5922 6840 6.094719 ACTGCATGTGTTAACAATGCAATAG 58.905 36.000 33.14 28.05 43.63 1.73
5923 6841 6.072008 ACTGCATGTGTTAACAATGCAATAGA 60.072 34.615 33.14 22.01 43.63 1.98
5924 6842 6.685657 TGCATGTGTTAACAATGCAATAGAA 58.314 32.000 32.61 20.34 42.52 2.10
5925 6843 7.321908 TGCATGTGTTAACAATGCAATAGAAT 58.678 30.769 32.61 7.69 42.52 2.40
5956 6874 5.806366 TCATCAGTAAACTGTGCATCATG 57.194 39.130 9.81 5.65 44.12 3.07
6054 6972 1.751351 CTCAGATCACCGCTGGACTTA 59.249 52.381 0.00 0.00 34.20 2.24
6066 6984 2.852748 CTGGACTTAGACACTTCGACG 58.147 52.381 0.00 0.00 0.00 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.880340 GACAGCTCGCCGGAAGATG 60.880 63.158 17.81 17.81 0.00 2.90
2 3 3.760035 GGACAGCTCGCCGGAAGA 61.760 66.667 5.05 1.98 0.00 2.87
3 4 3.764466 AGGACAGCTCGCCGGAAG 61.764 66.667 5.05 1.96 0.00 3.46
6 7 4.504916 CTCAGGACAGCTCGCCGG 62.505 72.222 0.00 0.00 0.00 6.13
7 8 4.504916 CCTCAGGACAGCTCGCCG 62.505 72.222 0.00 0.00 0.00 6.46
8 9 3.386237 ACCTCAGGACAGCTCGCC 61.386 66.667 0.00 0.00 0.00 5.54
9 10 2.125753 CACCTCAGGACAGCTCGC 60.126 66.667 0.00 0.00 0.00 5.03
10 11 1.510383 CTCACCTCAGGACAGCTCG 59.490 63.158 0.00 0.00 0.00 5.03
11 12 0.902516 ACCTCACCTCAGGACAGCTC 60.903 60.000 0.00 0.00 36.96 4.09
12 13 1.157276 ACCTCACCTCAGGACAGCT 59.843 57.895 0.00 0.00 36.96 4.24
13 14 1.294780 CACCTCACCTCAGGACAGC 59.705 63.158 0.00 0.00 36.96 4.40
14 15 0.542938 TCCACCTCACCTCAGGACAG 60.543 60.000 0.00 0.00 36.96 3.51
15 16 0.542938 CTCCACCTCACCTCAGGACA 60.543 60.000 0.00 0.00 36.96 4.02
16 17 0.251832 TCTCCACCTCACCTCAGGAC 60.252 60.000 0.00 0.00 36.96 3.85
17 18 0.487325 TTCTCCACCTCACCTCAGGA 59.513 55.000 0.00 0.00 36.96 3.86
18 19 0.901124 CTTCTCCACCTCACCTCAGG 59.099 60.000 0.00 0.00 39.80 3.86
19 20 0.248843 GCTTCTCCACCTCACCTCAG 59.751 60.000 0.00 0.00 0.00 3.35
20 21 1.536073 CGCTTCTCCACCTCACCTCA 61.536 60.000 0.00 0.00 0.00 3.86
21 22 1.216710 CGCTTCTCCACCTCACCTC 59.783 63.158 0.00 0.00 0.00 3.85
22 23 2.286523 CCGCTTCTCCACCTCACCT 61.287 63.158 0.00 0.00 0.00 4.00
23 24 1.827399 TTCCGCTTCTCCACCTCACC 61.827 60.000 0.00 0.00 0.00 4.02
24 25 0.670854 GTTCCGCTTCTCCACCTCAC 60.671 60.000 0.00 0.00 0.00 3.51
25 26 1.118965 TGTTCCGCTTCTCCACCTCA 61.119 55.000 0.00 0.00 0.00 3.86
26 27 0.250513 ATGTTCCGCTTCTCCACCTC 59.749 55.000 0.00 0.00 0.00 3.85
27 28 0.693049 AATGTTCCGCTTCTCCACCT 59.307 50.000 0.00 0.00 0.00 4.00
28 29 0.804989 CAATGTTCCGCTTCTCCACC 59.195 55.000 0.00 0.00 0.00 4.61
29 30 1.464997 GACAATGTTCCGCTTCTCCAC 59.535 52.381 0.00 0.00 0.00 4.02
30 31 1.808411 GACAATGTTCCGCTTCTCCA 58.192 50.000 0.00 0.00 0.00 3.86
31 32 0.721718 CGACAATGTTCCGCTTCTCC 59.278 55.000 0.00 0.00 0.00 3.71
32 33 0.721718 CCGACAATGTTCCGCTTCTC 59.278 55.000 0.00 0.00 0.00 2.87
33 34 0.034896 ACCGACAATGTTCCGCTTCT 59.965 50.000 0.00 0.00 0.00 2.85
34 35 0.872388 AACCGACAATGTTCCGCTTC 59.128 50.000 0.00 0.00 0.00 3.86
35 36 1.314730 AAACCGACAATGTTCCGCTT 58.685 45.000 0.00 0.00 0.00 4.68
36 37 2.172851 TAAACCGACAATGTTCCGCT 57.827 45.000 0.00 0.00 0.00 5.52
37 38 2.160813 ACATAAACCGACAATGTTCCGC 59.839 45.455 0.00 0.00 29.68 5.54
38 39 3.181514 GGACATAAACCGACAATGTTCCG 60.182 47.826 0.00 0.00 34.09 4.30
39 40 4.351131 GGACATAAACCGACAATGTTCC 57.649 45.455 0.00 0.00 34.09 3.62
50 51 4.313277 GGTACCTACTCGGACATAAACC 57.687 50.000 4.06 0.00 36.31 3.27
63 64 5.455754 GTCGCCGACATATGGGTACCTAC 62.456 56.522 13.23 0.00 40.36 3.18
64 65 3.395217 GTCGCCGACATATGGGTACCTA 61.395 54.545 13.23 6.02 40.36 3.08
65 66 2.698060 GTCGCCGACATATGGGTACCT 61.698 57.143 13.23 0.00 40.36 3.08
66 67 0.319297 GTCGCCGACATATGGGTACC 60.319 60.000 13.23 2.17 40.20 3.34
67 68 0.386476 TGTCGCCGACATATGGGTAC 59.614 55.000 17.22 3.74 37.67 3.34
68 69 1.112950 TTGTCGCCGACATATGGGTA 58.887 50.000 21.92 0.43 42.40 3.69
69 70 0.468226 ATTGTCGCCGACATATGGGT 59.532 50.000 21.92 0.66 42.40 4.51
70 71 0.867746 CATTGTCGCCGACATATGGG 59.132 55.000 21.92 5.34 42.40 4.00
71 72 1.581934 ACATTGTCGCCGACATATGG 58.418 50.000 28.67 19.28 42.40 2.74
72 73 2.607180 TCAACATTGTCGCCGACATATG 59.393 45.455 26.15 26.15 42.40 1.78
73 74 2.607635 GTCAACATTGTCGCCGACATAT 59.392 45.455 21.92 13.92 42.40 1.78
74 75 1.996898 GTCAACATTGTCGCCGACATA 59.003 47.619 21.92 12.22 42.40 2.29
75 76 0.796312 GTCAACATTGTCGCCGACAT 59.204 50.000 21.92 8.48 42.40 3.06
76 77 0.530870 TGTCAACATTGTCGCCGACA 60.531 50.000 17.22 17.22 41.09 4.35
77 78 0.796312 ATGTCAACATTGTCGCCGAC 59.204 50.000 10.96 10.96 31.37 4.79
78 79 0.795698 CATGTCAACATTGTCGCCGA 59.204 50.000 0.00 0.00 33.61 5.54
79 80 0.179192 CCATGTCAACATTGTCGCCG 60.179 55.000 0.00 0.00 33.61 6.46
80 81 1.131126 CTCCATGTCAACATTGTCGCC 59.869 52.381 0.00 0.00 33.61 5.54
81 82 1.131126 CCTCCATGTCAACATTGTCGC 59.869 52.381 0.00 0.00 33.61 5.19
82 83 1.739466 CCCTCCATGTCAACATTGTCG 59.261 52.381 0.00 0.00 33.61 4.35
83 84 1.474077 GCCCTCCATGTCAACATTGTC 59.526 52.381 0.00 0.00 33.61 3.18
84 85 1.203038 TGCCCTCCATGTCAACATTGT 60.203 47.619 0.00 0.00 33.61 2.71
85 86 1.475280 CTGCCCTCCATGTCAACATTG 59.525 52.381 0.00 0.00 33.61 2.82
86 87 1.843368 CTGCCCTCCATGTCAACATT 58.157 50.000 0.00 0.00 33.61 2.71
87 88 0.682209 GCTGCCCTCCATGTCAACAT 60.682 55.000 0.00 0.00 36.96 2.71
88 89 1.303561 GCTGCCCTCCATGTCAACA 60.304 57.895 0.00 0.00 0.00 3.33
89 90 1.001641 AGCTGCCCTCCATGTCAAC 60.002 57.895 0.00 0.00 0.00 3.18
90 91 1.300963 GAGCTGCCCTCCATGTCAA 59.699 57.895 0.00 0.00 34.35 3.18
91 92 1.907222 CTGAGCTGCCCTCCATGTCA 61.907 60.000 0.00 0.00 39.98 3.58
92 93 1.153208 CTGAGCTGCCCTCCATGTC 60.153 63.158 0.00 0.00 39.98 3.06
93 94 1.203441 TTCTGAGCTGCCCTCCATGT 61.203 55.000 0.00 0.00 39.98 3.21
94 95 0.034767 TTTCTGAGCTGCCCTCCATG 60.035 55.000 0.00 0.00 39.98 3.66
95 96 0.255318 CTTTCTGAGCTGCCCTCCAT 59.745 55.000 0.00 0.00 39.98 3.41
96 97 1.681666 CTTTCTGAGCTGCCCTCCA 59.318 57.895 0.00 0.00 39.98 3.86
97 98 4.633769 CTTTCTGAGCTGCCCTCC 57.366 61.111 0.00 0.00 39.98 4.30
106 107 2.437359 CCGCCCAGGCTTTCTGAG 60.437 66.667 7.17 0.00 46.18 3.35
107 108 4.033776 CCCGCCCAGGCTTTCTGA 62.034 66.667 7.17 0.00 46.18 3.27
156 157 2.666862 TTGTTGTAGCCGCCACCG 60.667 61.111 0.00 0.00 0.00 4.94
163 164 2.038837 GTCGGCCCTTGTTGTAGCC 61.039 63.158 0.00 0.00 42.18 3.93
169 170 0.250338 GTCTCAAGTCGGCCCTTGTT 60.250 55.000 17.98 0.00 42.01 2.83
178 179 1.002251 GCTAGGGATCGTCTCAAGTCG 60.002 57.143 0.00 0.00 0.00 4.18
183 184 2.234143 CTCATGCTAGGGATCGTCTCA 58.766 52.381 0.00 0.00 0.00 3.27
184 185 1.543802 CCTCATGCTAGGGATCGTCTC 59.456 57.143 0.00 0.00 32.55 3.36
197 199 0.106819 ACAAGGCATCCTCCTCATGC 60.107 55.000 0.00 0.00 45.13 4.06
202 204 2.270205 CGCACAAGGCATCCTCCT 59.730 61.111 0.00 0.00 45.17 3.69
211 213 4.705519 CGCCAAAGCCGCACAAGG 62.706 66.667 0.00 0.00 34.57 3.61
248 250 2.146342 CTTAGATATGGGCCGCTGTTG 58.854 52.381 0.00 0.00 0.00 3.33
254 256 1.741770 GCCGCTTAGATATGGGCCG 60.742 63.158 0.00 0.00 37.82 6.13
258 260 1.736032 GCTACCGCCGCTTAGATATGG 60.736 57.143 1.07 0.00 0.00 2.74
259 261 1.067846 TGCTACCGCCGCTTAGATATG 60.068 52.381 1.07 0.00 34.43 1.78
260 262 1.254026 TGCTACCGCCGCTTAGATAT 58.746 50.000 1.07 0.00 34.43 1.63
261 263 1.034356 TTGCTACCGCCGCTTAGATA 58.966 50.000 1.07 0.00 34.43 1.98
262 264 0.529992 GTTGCTACCGCCGCTTAGAT 60.530 55.000 1.07 0.00 34.43 1.98
263 265 1.153706 GTTGCTACCGCCGCTTAGA 60.154 57.895 1.07 0.00 34.43 2.10
264 266 2.514013 CGTTGCTACCGCCGCTTAG 61.514 63.158 0.00 0.00 34.43 2.18
265 267 2.287457 ATCGTTGCTACCGCCGCTTA 62.287 55.000 0.00 0.00 34.43 3.09
266 268 3.659089 ATCGTTGCTACCGCCGCTT 62.659 57.895 0.00 0.00 34.43 4.68
267 269 3.659089 AATCGTTGCTACCGCCGCT 62.659 57.895 0.00 0.00 34.43 5.52
268 270 2.627201 GAAATCGTTGCTACCGCCGC 62.627 60.000 0.00 0.00 34.43 6.53
269 271 1.082117 AGAAATCGTTGCTACCGCCG 61.082 55.000 0.00 0.00 34.43 6.46
270 272 1.062148 GAAGAAATCGTTGCTACCGCC 59.938 52.381 0.00 0.00 34.43 6.13
271 273 2.000447 AGAAGAAATCGTTGCTACCGC 59.000 47.619 0.00 0.00 0.00 5.68
272 274 4.663636 AAAGAAGAAATCGTTGCTACCG 57.336 40.909 0.00 0.00 0.00 4.02
273 275 5.758924 ACAAAAGAAGAAATCGTTGCTACC 58.241 37.500 0.00 0.00 33.62 3.18
274 276 6.659776 AGACAAAAGAAGAAATCGTTGCTAC 58.340 36.000 0.00 0.00 33.62 3.58
275 277 6.861065 AGACAAAAGAAGAAATCGTTGCTA 57.139 33.333 0.00 0.00 33.62 3.49
276 278 5.757850 AGACAAAAGAAGAAATCGTTGCT 57.242 34.783 0.00 0.00 33.62 3.91
277 279 5.971202 TCAAGACAAAAGAAGAAATCGTTGC 59.029 36.000 0.00 0.00 33.62 4.17
278 280 6.414987 GGTCAAGACAAAAGAAGAAATCGTTG 59.585 38.462 2.29 0.00 35.36 4.10
279 281 6.459710 GGGTCAAGACAAAAGAAGAAATCGTT 60.460 38.462 2.29 0.00 0.00 3.85
280 282 5.008712 GGGTCAAGACAAAAGAAGAAATCGT 59.991 40.000 2.29 0.00 0.00 3.73
283 285 5.536538 GGAGGGTCAAGACAAAAGAAGAAAT 59.463 40.000 2.29 0.00 0.00 2.17
291 293 4.097286 CGAAAAAGGAGGGTCAAGACAAAA 59.903 41.667 2.29 0.00 0.00 2.44
300 302 2.747989 GACCAATCGAAAAAGGAGGGTC 59.252 50.000 0.00 0.00 35.80 4.46
305 307 3.140325 AGCAGACCAATCGAAAAAGGA 57.860 42.857 0.00 0.00 0.00 3.36
307 309 4.222114 GTGAAGCAGACCAATCGAAAAAG 58.778 43.478 0.00 0.00 0.00 2.27
308 310 3.004315 GGTGAAGCAGACCAATCGAAAAA 59.996 43.478 0.00 0.00 33.25 1.94
309 311 2.552315 GGTGAAGCAGACCAATCGAAAA 59.448 45.455 0.00 0.00 33.25 2.29
310 312 2.151202 GGTGAAGCAGACCAATCGAAA 58.849 47.619 0.00 0.00 33.25 3.46
311 313 1.808411 GGTGAAGCAGACCAATCGAA 58.192 50.000 0.00 0.00 33.25 3.71
313 315 0.670546 ACGGTGAAGCAGACCAATCG 60.671 55.000 0.00 0.00 32.45 3.34
315 317 0.687354 AGACGGTGAAGCAGACCAAT 59.313 50.000 0.00 0.00 32.45 3.16
316 318 0.033504 GAGACGGTGAAGCAGACCAA 59.966 55.000 0.00 0.00 32.45 3.67
317 319 1.666011 GAGACGGTGAAGCAGACCA 59.334 57.895 0.00 0.00 32.45 4.02
318 320 1.444553 CGAGACGGTGAAGCAGACC 60.445 63.158 0.00 0.00 0.00 3.85
319 321 0.729816 GTCGAGACGGTGAAGCAGAC 60.730 60.000 0.00 0.00 0.00 3.51
320 322 1.170290 TGTCGAGACGGTGAAGCAGA 61.170 55.000 0.00 0.00 0.00 4.26
321 323 0.730834 CTGTCGAGACGGTGAAGCAG 60.731 60.000 3.99 0.00 33.13 4.24
322 324 1.285950 CTGTCGAGACGGTGAAGCA 59.714 57.895 3.99 0.00 33.13 3.91
326 328 1.299562 GAGAGCTGTCGAGACGGTGA 61.300 60.000 12.96 0.00 39.81 4.02
331 333 4.783903 GCAGAGAGCTGTCGAGAC 57.216 61.111 5.05 0.00 44.17 3.36
350 352 1.806623 CGAAGAAATAGCTCACCCCGG 60.807 57.143 0.00 0.00 0.00 5.73
380 382 1.450134 GTCGTCTGCATCATGGCCA 60.450 57.895 8.56 8.56 0.00 5.36
388 390 2.126463 CGTCGTGGTCGTCTGCAT 60.126 61.111 0.00 0.00 38.33 3.96
389 391 4.337060 CCGTCGTGGTCGTCTGCA 62.337 66.667 0.00 0.00 38.33 4.41
412 435 3.680920 AACACCCACCCCGCCAAAA 62.681 57.895 0.00 0.00 0.00 2.44
415 438 3.680920 AAAAACACCCACCCCGCCA 62.681 57.895 0.00 0.00 0.00 5.69
432 455 0.890090 CCCACCCCGCGTTCTAAAAA 60.890 55.000 4.92 0.00 0.00 1.94
433 456 1.302671 CCCACCCCGCGTTCTAAAA 60.303 57.895 4.92 0.00 0.00 1.52
434 457 2.348243 CCCACCCCGCGTTCTAAA 59.652 61.111 4.92 0.00 0.00 1.85
435 458 2.924101 ACCCACCCCGCGTTCTAA 60.924 61.111 4.92 0.00 0.00 2.10
436 459 3.697747 CACCCACCCCGCGTTCTA 61.698 66.667 4.92 0.00 0.00 2.10
445 468 3.860930 ATGACCAACGCACCCACCC 62.861 63.158 0.00 0.00 0.00 4.61
446 469 2.282180 ATGACCAACGCACCCACC 60.282 61.111 0.00 0.00 0.00 4.61
447 470 0.604243 TACATGACCAACGCACCCAC 60.604 55.000 0.00 0.00 0.00 4.61
448 471 0.321210 CTACATGACCAACGCACCCA 60.321 55.000 0.00 0.00 0.00 4.51
449 472 0.321298 ACTACATGACCAACGCACCC 60.321 55.000 0.00 0.00 0.00 4.61
450 473 2.373540 TACTACATGACCAACGCACC 57.626 50.000 0.00 0.00 0.00 5.01
451 474 4.939509 AATTACTACATGACCAACGCAC 57.060 40.909 0.00 0.00 0.00 5.34
452 475 5.950758 AAAATTACTACATGACCAACGCA 57.049 34.783 0.00 0.00 0.00 5.24
501 524 0.322997 AAAATCCAACGGATCGCCCA 60.323 50.000 0.00 0.00 42.27 5.36
505 528 4.671880 TGTTGTAAAATCCAACGGATCG 57.328 40.909 0.00 0.00 42.27 3.69
542 565 4.568152 ATGAAAAAGTGTTTGACTCGGG 57.432 40.909 0.00 0.00 31.73 5.14
561 584 3.733077 GCCCTTGAGAAGCGATGAAAATG 60.733 47.826 0.00 0.00 0.00 2.32
562 585 2.424956 GCCCTTGAGAAGCGATGAAAAT 59.575 45.455 0.00 0.00 0.00 1.82
563 586 1.812571 GCCCTTGAGAAGCGATGAAAA 59.187 47.619 0.00 0.00 0.00 2.29
571 598 0.244721 AATTTGCGCCCTTGAGAAGC 59.755 50.000 4.18 0.00 0.00 3.86
636 663 1.594836 GCGTACCGTGTGTTTGGGA 60.595 57.895 0.00 0.00 0.00 4.37
773 800 4.065088 CGTTGGTTCAAAGGATTCAGAGA 58.935 43.478 0.00 0.00 0.00 3.10
790 817 3.523374 AAAAGGGAGGGGGCGTTGG 62.523 63.158 0.00 0.00 0.00 3.77
837 864 0.451383 CGCGAATCAAGAAATGGCCA 59.549 50.000 8.56 8.56 0.00 5.36
842 869 6.142480 CGATTACTACTCGCGAATCAAGAAAT 59.858 38.462 11.33 4.44 0.00 2.17
853 880 2.893837 CTCACTCGATTACTACTCGCG 58.106 52.381 0.00 0.00 36.11 5.87
855 882 3.303461 CCTGCTCACTCGATTACTACTCG 60.303 52.174 0.00 0.00 37.47 4.18
874 901 0.809241 GCACTGCTACTGCTAGCCTG 60.809 60.000 13.29 7.79 44.45 4.85
913 940 6.372931 TGGAATTTCCCCCAGAATATAACAG 58.627 40.000 12.90 0.00 35.03 3.16
952 979 9.915629 ACAACTAGTGATACTCTTGAGTAAAAG 57.084 33.333 13.56 9.40 0.00 2.27
984 1011 3.804325 ACAACATTCAGTTCGTCACTCTG 59.196 43.478 0.00 0.00 38.74 3.35
1065 1092 7.939588 AGCACCTATCTTAAATTACCCTTCATC 59.060 37.037 0.00 0.00 0.00 2.92
1067 1094 7.208064 AGCACCTATCTTAAATTACCCTTCA 57.792 36.000 0.00 0.00 0.00 3.02
1090 1117 2.417933 GGTGACAAGCATGCTCTGTTAG 59.582 50.000 22.93 9.41 0.00 2.34
1107 1134 2.818169 GGCCTGATATGCCCGGTGA 61.818 63.158 0.00 0.00 43.33 4.02
1323 1355 5.120399 AGGTGTTCGTTAGTTCATTTGTCA 58.880 37.500 0.00 0.00 0.00 3.58
1441 1477 0.167470 CAACAACATCCTCAGCTGCG 59.833 55.000 9.47 1.71 0.00 5.18
1465 1501 1.638467 GCAAGTAGCAGCGAATCCG 59.362 57.895 0.00 0.00 44.79 4.18
1519 1555 2.028112 TCCCCATTCAGAAGTCAACTCG 60.028 50.000 0.00 0.00 0.00 4.18
1526 1562 4.901250 ACACAAAATTCCCCATTCAGAAGT 59.099 37.500 0.00 0.00 0.00 3.01
1571 1610 7.519809 GCAACACGCCATATTATTATCAAGTCA 60.520 37.037 0.00 0.00 32.94 3.41
1584 1623 0.452987 CTGCAAGCAACACGCCATAT 59.547 50.000 0.00 0.00 44.04 1.78
1585 1624 0.888736 ACTGCAAGCAACACGCCATA 60.889 50.000 0.00 0.00 44.04 2.74
1588 1627 1.945662 CAACTGCAAGCAACACGCC 60.946 57.895 0.00 0.00 44.04 5.68
1590 1629 1.064621 AGCAACTGCAAGCAACACG 59.935 52.632 4.22 0.00 45.16 4.49
1594 1633 0.816373 TCAACAGCAACTGCAAGCAA 59.184 45.000 4.22 0.00 45.16 3.91
1615 1654 1.271379 CGAAACAGGGGAACCATCAGT 60.271 52.381 0.00 0.00 40.34 3.41
1695 1734 3.531538 GTTAATTCGATCAGCCTGGTCA 58.468 45.455 5.70 0.00 0.00 4.02
1716 1755 1.290203 ATACAGGTGAATTGCGAGCG 58.710 50.000 0.00 0.00 0.00 5.03
1808 1847 6.252655 GTCCGCACAATTATGATTTAAACCAC 59.747 38.462 0.00 0.00 0.00 4.16
1962 2004 9.783081 AGGTTTCAAAATGCTAAAATTCTGATT 57.217 25.926 0.00 0.00 0.00 2.57
1963 2005 9.211485 CAGGTTTCAAAATGCTAAAATTCTGAT 57.789 29.630 0.00 0.00 0.00 2.90
1972 2014 6.204495 GCAATTTCCAGGTTTCAAAATGCTAA 59.796 34.615 4.75 0.00 0.00 3.09
1973 2015 5.700373 GCAATTTCCAGGTTTCAAAATGCTA 59.300 36.000 4.75 0.00 0.00 3.49
2008 2050 8.884124 TTAATTTCTTCAAACCATCTCCAGAT 57.116 30.769 0.00 0.00 34.56 2.90
2055 2097 8.908903 TGTAACCAACATCAATTTTAGTGACTT 58.091 29.630 0.00 0.00 31.43 3.01
2068 2110 7.992608 AGTATATTCATGCTGTAACCAACATCA 59.007 33.333 0.00 0.00 38.51 3.07
2116 2158 9.959749 TTGCTTAACAACTTTTCTCGAAAATAT 57.040 25.926 5.39 0.00 35.12 1.28
2153 2195 9.066892 GCAAGGGAGATAATCAAATAATACACA 57.933 33.333 0.00 0.00 0.00 3.72
2508 2559 4.344978 AGCCTATTTCTTCCCAAAAGACC 58.655 43.478 0.00 0.00 0.00 3.85
2578 2629 5.240013 TGGAAGGGGGAAATGAAAAATTG 57.760 39.130 0.00 0.00 0.00 2.32
2580 2631 3.264193 GCTGGAAGGGGGAAATGAAAAAT 59.736 43.478 0.00 0.00 0.00 1.82
3340 3686 7.112565 CGCTGAACATTGAATCACAATATAAGC 59.887 37.037 0.00 0.00 46.01 3.09
3607 3978 6.339730 GGAATATTTTGTTCATGTGCCATCA 58.660 36.000 0.00 0.00 0.00 3.07
3747 4119 5.519566 TCACATTGCAAATTTGTGAAGACAC 59.480 36.000 24.87 1.08 41.38 3.67
3759 4131 7.833786 AGATCTTTATGTGTCACATTGCAAAT 58.166 30.769 23.05 10.96 39.88 2.32
3789 4402 6.314896 GGAGACTGTTTGATTTGGTCTGATAG 59.685 42.308 0.00 0.00 37.38 2.08
3806 4419 2.370189 CAGGACAGGAAAAGGAGACTGT 59.630 50.000 0.00 0.00 45.99 3.55
4011 4661 9.624697 ATTGTGTTATGTTGTCATATTGTTGAC 57.375 29.630 0.00 0.00 45.05 3.18
4458 5364 3.741344 GGGTGTCGATCTAACATACATGC 59.259 47.826 0.00 0.00 0.00 4.06
4466 5372 2.930682 GCAAGAAGGGTGTCGATCTAAC 59.069 50.000 0.00 0.00 0.00 2.34
4519 5425 3.736720 TGATATCTGCATGCTCTTGGAC 58.263 45.455 20.33 5.85 0.00 4.02
4542 5448 1.401905 GCAGGAAAAAGAGGCATACCG 59.598 52.381 0.00 0.00 42.76 4.02
4606 5512 7.653311 ACATCCTGCAAAGAACAAGTAAATTTC 59.347 33.333 0.00 0.00 0.00 2.17
4609 5518 6.294731 GGACATCCTGCAAAGAACAAGTAAAT 60.295 38.462 0.00 0.00 0.00 1.40
4629 5538 9.661954 TTCTCTCTAGGAAGTATTATTGGACAT 57.338 33.333 0.00 0.00 0.00 3.06
4707 5616 5.895636 TTGCATCGTGAATACCAGAAAAT 57.104 34.783 0.00 0.00 0.00 1.82
4814 5724 5.710984 ACATGTTCTCTAGGTTGTCTAACG 58.289 41.667 0.00 0.00 37.69 3.18
4845 5755 3.697045 TGGACGAAAATCGGGCATATTTT 59.303 39.130 8.28 8.28 45.59 1.82
4859 5769 6.450545 TGTATGCAAATCAAAATGGACGAAA 58.549 32.000 0.00 0.00 0.00 3.46
4971 5881 3.328382 TCGTGGTATTTCTTCACCCTG 57.672 47.619 0.00 0.00 33.61 4.45
5002 5912 6.070938 TGCTCATACAGGGATCTGAATATCTG 60.071 42.308 0.00 0.00 43.49 2.90
5010 5920 3.464907 CTGTTGCTCATACAGGGATCTG 58.535 50.000 0.00 0.00 46.10 2.90
5047 5957 2.888534 CAATGCTTGCGCCATGGC 60.889 61.111 27.67 27.67 34.43 4.40
5088 5998 1.348036 ACCAAGAGTGAAGTACCCAGC 59.652 52.381 0.00 0.00 0.00 4.85
5093 6003 6.590677 GGTATTCAGAACCAAGAGTGAAGTAC 59.409 42.308 0.00 0.00 36.96 2.73
5205 6115 9.886132 GATCCTTTTCTATACTTTTGGTGACTA 57.114 33.333 0.00 0.00 0.00 2.59
5227 6137 7.881775 ATTACCATTTCACTACAAAGGATCC 57.118 36.000 2.48 2.48 0.00 3.36
5269 6179 5.551760 AACCGAAGCATCTAATTTCACAG 57.448 39.130 0.00 0.00 0.00 3.66
5286 6196 0.033781 ACCACCGAAATTCGAACCGA 59.966 50.000 17.75 0.00 43.74 4.69
5711 6621 3.140814 GTTTCGATGGCAGCCCCC 61.141 66.667 9.64 0.00 0.00 5.40
5712 6622 2.361104 TGTTTCGATGGCAGCCCC 60.361 61.111 9.64 0.00 0.00 5.80
5713 6623 3.056313 GCTGTTTCGATGGCAGCCC 62.056 63.158 19.28 0.00 46.93 5.19
5714 6624 2.486966 GCTGTTTCGATGGCAGCC 59.513 61.111 19.28 3.66 46.93 4.85
5716 6626 0.647410 CTACGCTGTTTCGATGGCAG 59.353 55.000 0.00 6.93 0.00 4.85
5717 6627 1.358725 GCTACGCTGTTTCGATGGCA 61.359 55.000 0.00 0.00 0.00 4.92
5718 6628 1.084370 AGCTACGCTGTTTCGATGGC 61.084 55.000 0.00 0.00 37.57 4.40
5719 6629 3.050703 AGCTACGCTGTTTCGATGG 57.949 52.632 0.00 0.00 37.57 3.51
5761 6671 1.016130 CAGCCGAGGTAGCACAAGTG 61.016 60.000 0.00 0.00 0.00 3.16
5762 6672 1.293498 CAGCCGAGGTAGCACAAGT 59.707 57.895 0.00 0.00 0.00 3.16
5763 6673 0.320771 AACAGCCGAGGTAGCACAAG 60.321 55.000 0.00 0.00 0.00 3.16
5800 6710 9.793259 AACAAACTCTGAGTAAAGGATGATTAA 57.207 29.630 11.30 0.00 0.00 1.40
5831 6749 1.030457 GGCAGCTCATCAGATTTGGG 58.970 55.000 0.00 0.00 0.00 4.12
5921 6839 8.188799 CAGTTTACTGATGATCAATGCAATTCT 58.811 33.333 0.00 0.00 46.59 2.40
5922 6840 7.972277 ACAGTTTACTGATGATCAATGCAATTC 59.028 33.333 16.31 0.00 46.59 2.17
5923 6841 7.758076 CACAGTTTACTGATGATCAATGCAATT 59.242 33.333 16.31 0.00 46.59 2.32
5924 6842 7.255569 CACAGTTTACTGATGATCAATGCAAT 58.744 34.615 16.31 0.00 46.59 3.56
5925 6843 6.614160 CACAGTTTACTGATGATCAATGCAA 58.386 36.000 16.31 0.00 46.59 4.08
5933 6851 5.884232 ACATGATGCACAGTTTACTGATGAT 59.116 36.000 16.31 4.81 46.59 2.45
5956 6874 6.205784 CAGTCTGATCTTATCTCGAGGAAAC 58.794 44.000 13.56 1.98 0.00 2.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.