Multiple sequence alignment - TraesCS6B01G177800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G177800 chr6B 100.000 6099 0 0 830 6928 195810544 195804446 0.000000e+00 11263.0
1 TraesCS6B01G177800 chr6B 100.000 113 0 0 1 113 195811373 195811261 7.040000e-50 209.0
2 TraesCS6B01G177800 chr6D 92.702 3220 168 32 1027 4212 108452126 108448940 0.000000e+00 4582.0
3 TraesCS6B01G177800 chr6D 89.957 2071 141 30 4445 6464 108448894 108446840 0.000000e+00 2610.0
4 TraesCS6B01G177800 chr6D 100.000 74 0 0 830 903 108452761 108452688 3.370000e-28 137.0
5 TraesCS6B01G177800 chr6D 82.883 111 4 6 3 113 108457176 108457081 1.240000e-12 86.1
6 TraesCS6B01G177800 chr6D 80.531 113 19 2 2951 3063 368369929 368369820 4.450000e-12 84.2
7 TraesCS6B01G177800 chr6A 91.331 3403 204 34 839 4212 133419267 133415927 0.000000e+00 4566.0
8 TraesCS6B01G177800 chr6A 91.025 1805 126 17 4684 6465 133415622 133413831 0.000000e+00 2403.0
9 TraesCS6B01G177800 chr6A 91.667 228 16 2 4448 4675 133415883 133415659 5.220000e-81 313.0
10 TraesCS6B01G177800 chr6A 81.765 340 34 12 6467 6787 102163302 102163632 6.890000e-65 259.0
11 TraesCS6B01G177800 chr6A 92.481 133 5 5 4205 4333 584480896 584480765 1.190000e-42 185.0
12 TraesCS6B01G177800 chr6A 80.095 211 17 16 6467 6672 445250595 445250405 4.360000e-27 134.0
13 TraesCS6B01G177800 chr4B 86.431 339 20 8 6467 6787 432263378 432263708 1.430000e-91 348.0
14 TraesCS6B01G177800 chr4B 85.588 340 22 7 6467 6787 376160064 376160395 1.440000e-86 331.0
15 TraesCS6B01G177800 chr4B 90.821 207 13 3 6467 6672 376158070 376158271 8.850000e-69 272.0
16 TraesCS6B01G177800 chr4B 79.586 338 40 14 6467 6785 2312403 2312730 1.510000e-51 215.0
17 TraesCS6B01G177800 chr4B 92.045 88 7 0 4363 4450 159603873 159603786 2.620000e-24 124.0
18 TraesCS6B01G177800 chr4D 80.290 482 66 11 6466 6928 242950881 242950410 3.100000e-88 337.0
19 TraesCS6B01G177800 chr4D 79.379 451 59 12 6467 6898 220355331 220354896 3.160000e-73 287.0
20 TraesCS6B01G177800 chr4D 96.667 120 2 2 4207 4325 160742258 160742376 1.520000e-46 198.0
21 TraesCS6B01G177800 chr4A 81.128 461 50 22 6467 6903 151310216 151310663 1.110000e-87 335.0
22 TraesCS6B01G177800 chr4A 97.436 117 1 2 4202 4317 548344065 548344180 1.520000e-46 198.0
23 TraesCS6B01G177800 chr1D 82.776 389 53 8 6467 6852 220500858 220501235 1.110000e-87 335.0
24 TraesCS6B01G177800 chr1D 81.846 325 44 8 6467 6788 220593623 220593935 6.890000e-65 259.0
25 TraesCS6B01G177800 chr1D 79.472 341 40 9 6467 6787 206966591 206966261 1.510000e-51 215.0
26 TraesCS6B01G177800 chr1D 95.868 121 3 2 4205 4324 73714969 73714850 1.970000e-45 195.0
27 TraesCS6B01G177800 chr1D 90.805 87 8 0 4361 4447 90207944 90208030 4.390000e-22 117.0
28 TraesCS6B01G177800 chr1D 90.805 87 8 0 4363 4449 139162919 139162833 4.390000e-22 117.0
29 TraesCS6B01G177800 chr2B 81.934 393 60 6 6467 6858 236518351 236517969 8.670000e-84 322.0
30 TraesCS6B01G177800 chr3B 79.424 486 62 23 6467 6928 67407459 67406988 6.750000e-80 309.0
31 TraesCS6B01G177800 chr3B 95.238 126 6 0 4201 4326 577429322 577429197 4.240000e-47 200.0
32 TraesCS6B01G177800 chr3B 95.161 124 5 1 4211 4333 63469116 63468993 1.970000e-45 195.0
33 TraesCS6B01G177800 chr3B 90.805 87 8 0 4367 4453 428700511 428700425 4.390000e-22 117.0
34 TraesCS6B01G177800 chr3B 75.936 187 30 10 2949 3127 533026918 533027097 1.600000e-11 82.4
35 TraesCS6B01G177800 chr5B 78.689 488 63 24 6467 6928 320475898 320475426 3.160000e-73 287.0
36 TraesCS6B01G177800 chr5B 97.458 118 2 1 4211 4327 70910688 70910805 4.240000e-47 200.0
37 TraesCS6B01G177800 chr3D 82.335 334 30 21 6467 6788 160759139 160759455 5.330000e-66 263.0
38 TraesCS6B01G177800 chr3D 80.175 343 43 17 6597 6918 160737947 160738285 4.180000e-57 233.0
39 TraesCS6B01G177800 chr3D 91.954 87 7 0 4363 4449 271512583 271512669 9.440000e-24 122.0
40 TraesCS6B01G177800 chr3D 89.189 74 6 2 2949 3021 407392008 407392080 2.660000e-14 91.6
41 TraesCS6B01G177800 chr5D 78.211 436 69 15 6466 6897 413471491 413471904 8.920000e-64 255.0
42 TraesCS6B01G177800 chr5D 79.143 350 40 15 6461 6787 462981360 462981021 1.960000e-50 211.0
43 TraesCS6B01G177800 chr5D 92.920 113 8 0 1 113 312384043 312383931 1.550000e-36 165.0
44 TraesCS6B01G177800 chr5D 90.805 87 8 0 4363 4449 111788728 111788642 4.390000e-22 117.0
45 TraesCS6B01G177800 chr5D 87.129 101 10 2 4350 4447 278275096 278275196 2.040000e-20 111.0
46 TraesCS6B01G177800 chr7A 96.032 126 3 2 4196 4319 501058866 501058991 3.280000e-48 204.0
47 TraesCS6B01G177800 chr7A 87.719 171 11 5 6467 6636 702224023 702224184 2.550000e-44 191.0
48 TraesCS6B01G177800 chr7A 96.460 113 3 1 4211 4322 150054019 150054131 1.190000e-42 185.0
49 TraesCS6B01G177800 chr7B 98.261 115 2 0 4203 4317 423767085 423767199 1.180000e-47 202.0
50 TraesCS6B01G177800 chr7B 94.872 117 6 0 4209 4325 22060531 22060647 4.270000e-42 183.0
51 TraesCS6B01G177800 chr7B 93.548 124 7 1 4211 4333 51069705 51069582 4.270000e-42 183.0
52 TraesCS6B01G177800 chr7B 88.542 96 8 3 4361 4454 553217814 553217908 5.680000e-21 113.0
53 TraesCS6B01G177800 chr2A 80.812 271 40 11 6665 6928 469808195 469807930 1.180000e-47 202.0
54 TraesCS6B01G177800 chr2A 83.838 99 16 0 2955 3053 100542885 100542983 2.060000e-15 95.3
55 TraesCS6B01G177800 chr3A 96.667 120 3 1 4211 4330 574336695 574336577 1.520000e-46 198.0
56 TraesCS6B01G177800 chr3A 92.424 132 8 2 4201 4332 219185215 219185086 3.300000e-43 187.0
57 TraesCS6B01G177800 chr3A 92.366 131 7 3 4204 4333 672302782 672302910 4.270000e-42 183.0
58 TraesCS6B01G177800 chr3A 93.651 63 4 0 2955 3017 544381005 544380943 2.060000e-15 95.3
59 TraesCS6B01G177800 chr3A 78.505 107 20 3 3118 3222 109299360 109299255 4.480000e-07 67.6
60 TraesCS6B01G177800 chr7D 95.833 120 4 1 4211 4330 52468647 52468765 7.090000e-45 193.0
61 TraesCS6B01G177800 chr7D 92.647 136 7 3 4187 4321 479651695 479651828 7.090000e-45 193.0
62 TraesCS6B01G177800 chr7D 88.350 103 10 1 4362 4464 362365387 362365287 9.440000e-24 122.0
63 TraesCS6B01G177800 chr7D 87.097 62 7 1 2957 3017 185127030 185126969 1.250000e-07 69.4
64 TraesCS6B01G177800 chr1B 80.282 213 23 13 6467 6672 490458452 490458652 7.240000e-30 143.0
65 TraesCS6B01G177800 chr2D 86.726 113 15 0 1 113 529180341 529180453 7.290000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G177800 chr6B 195804446 195811373 6927 True 5736.000000 11263 100.000000 1 6928 2 chr6B.!!$R1 6927
1 TraesCS6B01G177800 chr6D 108446840 108452761 5921 True 2443.000000 4582 94.219667 830 6464 3 chr6D.!!$R3 5634
2 TraesCS6B01G177800 chr6A 133413831 133419267 5436 True 2427.333333 4566 91.341000 839 6465 3 chr6A.!!$R3 5626
3 TraesCS6B01G177800 chr4B 376158070 376160395 2325 False 301.500000 331 88.204500 6467 6787 2 chr4B.!!$F3 320

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
58 59 0.029567 ATCGGCTTCTCGACGTCATC 59.970 55.0 17.16 0.00 46.75 2.92 F
985 986 0.035439 ACTTGATCAATCCCGGCGTT 60.035 50.0 8.96 0.00 0.00 4.84 F
1691 2147 0.396974 ACAAAGGGGTGAAGCTTGCA 60.397 50.0 2.10 0.00 0.00 4.08 F
2732 3199 0.449786 CAATACCGTGCCGCAAATCA 59.550 50.0 0.00 0.00 0.00 2.57 F
4226 4709 0.251297 TGTTACTCCCTCCGTTCGGA 60.251 55.0 13.34 13.34 0.00 4.55 F
4377 4861 0.047176 ATTGTACCCCCTCCATCCCA 59.953 55.0 0.00 0.00 0.00 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1251 1692 0.179129 CATTTGTGCGCAGGGGAATC 60.179 55.0 12.22 0.00 0.00 2.52 R
2920 3389 0.322187 AGGCCAAAGTTATTCGGCGT 60.322 50.0 5.01 0.00 45.85 5.68 R
3171 3642 0.314935 CGCCTGCAAACATCCAAACT 59.685 50.0 0.00 0.00 0.00 2.66 R
4299 4782 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 R
5887 6413 0.037419 ATTTTGTTGGACGCATGGCC 60.037 50.0 0.00 0.00 0.00 5.36 R
6363 6911 0.253044 GCCCTATGTTCAGCTCACCA 59.747 55.0 0.00 0.00 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.459232 TCTCACCATCTGAAATAGCCG 57.541 47.619 0.00 0.00 0.00 5.52
23 24 2.103094 TCTCACCATCTGAAATAGCCGG 59.897 50.000 0.00 0.00 0.00 6.13
24 25 0.947244 CACCATCTGAAATAGCCGGC 59.053 55.000 21.89 21.89 0.00 6.13
25 26 0.546122 ACCATCTGAAATAGCCGGCA 59.454 50.000 31.54 15.56 0.00 5.69
26 27 1.064758 ACCATCTGAAATAGCCGGCAA 60.065 47.619 31.54 5.47 0.00 4.52
27 28 1.605710 CCATCTGAAATAGCCGGCAAG 59.394 52.381 31.54 15.30 0.00 4.01
28 29 2.564771 CATCTGAAATAGCCGGCAAGA 58.435 47.619 31.54 19.93 0.00 3.02
29 30 2.779755 TCTGAAATAGCCGGCAAGAA 57.220 45.000 31.54 11.54 0.00 2.52
30 31 2.632377 TCTGAAATAGCCGGCAAGAAG 58.368 47.619 31.54 17.50 0.00 2.85
31 32 2.236146 TCTGAAATAGCCGGCAAGAAGA 59.764 45.455 31.54 19.53 0.00 2.87
32 33 2.352960 CTGAAATAGCCGGCAAGAAGAC 59.647 50.000 31.54 13.63 0.00 3.01
41 42 1.859383 GGCAAGAAGACGAGGCTATC 58.141 55.000 0.00 0.00 0.00 2.08
51 52 4.581105 AGGCTATCGGCTTCTCGA 57.419 55.556 0.00 0.00 44.74 4.04
52 53 2.034607 AGGCTATCGGCTTCTCGAC 58.965 57.895 0.00 0.00 44.74 4.20
54 55 1.355916 GCTATCGGCTTCTCGACGT 59.644 57.895 0.00 0.00 46.75 4.34
55 56 0.657951 GCTATCGGCTTCTCGACGTC 60.658 60.000 5.18 5.18 46.75 4.34
56 57 0.656259 CTATCGGCTTCTCGACGTCA 59.344 55.000 17.16 1.87 46.75 4.35
57 58 1.264557 CTATCGGCTTCTCGACGTCAT 59.735 52.381 17.16 0.29 46.75 3.06
58 59 0.029567 ATCGGCTTCTCGACGTCATC 59.970 55.000 17.16 0.00 46.75 2.92
59 60 1.136774 CGGCTTCTCGACGTCATCA 59.863 57.895 17.16 0.00 40.01 3.07
60 61 0.248661 CGGCTTCTCGACGTCATCAT 60.249 55.000 17.16 0.00 40.01 2.45
61 62 1.002792 CGGCTTCTCGACGTCATCATA 60.003 52.381 17.16 0.00 40.01 2.15
62 63 2.540973 CGGCTTCTCGACGTCATCATAA 60.541 50.000 17.16 1.30 40.01 1.90
63 64 3.444916 GGCTTCTCGACGTCATCATAAA 58.555 45.455 17.16 0.00 0.00 1.40
64 65 3.487574 GGCTTCTCGACGTCATCATAAAG 59.512 47.826 17.16 10.35 0.00 1.85
65 66 4.352039 GCTTCTCGACGTCATCATAAAGA 58.648 43.478 17.16 0.76 0.00 2.52
66 67 4.979197 GCTTCTCGACGTCATCATAAAGAT 59.021 41.667 17.16 0.00 37.48 2.40
67 68 5.116377 GCTTCTCGACGTCATCATAAAGATC 59.884 44.000 17.16 0.00 33.72 2.75
68 69 5.751243 TCTCGACGTCATCATAAAGATCA 57.249 39.130 17.16 0.00 33.72 2.92
69 70 6.319141 TCTCGACGTCATCATAAAGATCAT 57.681 37.500 17.16 0.00 33.72 2.45
70 71 6.374578 TCTCGACGTCATCATAAAGATCATC 58.625 40.000 17.16 0.00 33.72 2.92
71 72 5.147162 TCGACGTCATCATAAAGATCATCG 58.853 41.667 17.16 0.00 33.72 3.84
72 73 4.912187 CGACGTCATCATAAAGATCATCGT 59.088 41.667 17.16 0.00 37.19 3.73
73 74 5.058613 CGACGTCATCATAAAGATCATCGTC 59.941 44.000 17.16 0.00 41.81 4.20
74 75 5.831997 ACGTCATCATAAAGATCATCGTCA 58.168 37.500 0.00 0.00 33.72 4.35
75 76 6.450545 ACGTCATCATAAAGATCATCGTCAT 58.549 36.000 0.00 0.00 33.72 3.06
76 77 6.364435 ACGTCATCATAAAGATCATCGTCATG 59.636 38.462 0.00 0.00 33.72 3.07
77 78 6.583806 CGTCATCATAAAGATCATCGTCATGA 59.416 38.462 0.00 0.00 43.45 3.07
78 79 7.115378 CGTCATCATAAAGATCATCGTCATGAA 59.885 37.037 0.00 0.00 42.53 2.57
79 80 8.433893 GTCATCATAAAGATCATCGTCATGAAG 58.566 37.037 0.00 0.00 42.53 3.02
80 81 8.362639 TCATCATAAAGATCATCGTCATGAAGA 58.637 33.333 13.84 13.84 42.53 2.87
81 82 8.648968 CATCATAAAGATCATCGTCATGAAGAG 58.351 37.037 16.45 9.04 42.53 2.85
82 83 7.150640 TCATAAAGATCATCGTCATGAAGAGG 58.849 38.462 15.81 15.81 42.53 3.69
83 84 5.604758 AAAGATCATCGTCATGAAGAGGA 57.395 39.130 24.33 24.33 42.53 3.71
84 85 5.604758 AAGATCATCGTCATGAAGAGGAA 57.395 39.130 25.50 12.32 43.64 3.36
85 86 5.199024 AGATCATCGTCATGAAGAGGAAG 57.801 43.478 25.50 11.87 43.64 3.46
86 87 4.892345 AGATCATCGTCATGAAGAGGAAGA 59.108 41.667 25.50 15.91 43.64 2.87
87 88 5.362143 AGATCATCGTCATGAAGAGGAAGAA 59.638 40.000 25.50 7.36 43.64 2.52
88 89 5.003692 TCATCGTCATGAAGAGGAAGAAG 57.996 43.478 20.97 4.35 43.64 2.85
89 90 4.464244 TCATCGTCATGAAGAGGAAGAAGT 59.536 41.667 20.97 0.00 43.64 3.01
90 91 4.442375 TCGTCATGAAGAGGAAGAAGTC 57.558 45.455 7.29 0.00 38.14 3.01
91 92 3.119814 TCGTCATGAAGAGGAAGAAGTCG 60.120 47.826 7.29 0.00 38.14 4.18
92 93 3.119814 CGTCATGAAGAGGAAGAAGTCGA 60.120 47.826 2.01 0.00 34.03 4.20
93 94 4.616143 CGTCATGAAGAGGAAGAAGTCGAA 60.616 45.833 2.01 0.00 34.03 3.71
94 95 4.862018 GTCATGAAGAGGAAGAAGTCGAAG 59.138 45.833 0.00 0.00 0.00 3.79
95 96 3.305398 TGAAGAGGAAGAAGTCGAAGC 57.695 47.619 0.00 0.00 0.00 3.86
96 97 2.628178 TGAAGAGGAAGAAGTCGAAGCA 59.372 45.455 0.00 0.00 0.00 3.91
97 98 3.249917 GAAGAGGAAGAAGTCGAAGCAG 58.750 50.000 0.00 0.00 0.00 4.24
98 99 2.520069 AGAGGAAGAAGTCGAAGCAGA 58.480 47.619 0.00 0.00 0.00 4.26
99 100 3.096092 AGAGGAAGAAGTCGAAGCAGAT 58.904 45.455 0.00 0.00 0.00 2.90
100 101 3.513515 AGAGGAAGAAGTCGAAGCAGATT 59.486 43.478 0.00 0.00 0.00 2.40
101 102 4.020662 AGAGGAAGAAGTCGAAGCAGATTT 60.021 41.667 0.00 0.00 0.00 2.17
102 103 5.186021 AGAGGAAGAAGTCGAAGCAGATTTA 59.814 40.000 0.00 0.00 0.00 1.40
103 104 5.983540 AGGAAGAAGTCGAAGCAGATTTAT 58.016 37.500 0.00 0.00 0.00 1.40
104 105 6.410540 AGGAAGAAGTCGAAGCAGATTTATT 58.589 36.000 0.00 0.00 0.00 1.40
105 106 6.536941 AGGAAGAAGTCGAAGCAGATTTATTC 59.463 38.462 9.34 9.34 37.35 1.75
106 107 5.957910 AGAAGTCGAAGCAGATTTATTCG 57.042 39.130 0.38 0.38 45.37 3.34
110 111 2.534349 TCGAAGCAGATTTATTCGACGC 59.466 45.455 5.25 0.00 46.96 5.19
111 112 2.654003 CGAAGCAGATTTATTCGACGCG 60.654 50.000 3.53 3.53 46.57 6.01
112 113 1.209128 AGCAGATTTATTCGACGCGG 58.791 50.000 12.47 0.00 0.00 6.46
919 920 2.431771 CGTCGGATCCACGCAACA 60.432 61.111 19.11 0.00 0.00 3.33
966 967 2.637382 TGCTGTTCTAGGGTTCACATCA 59.363 45.455 0.00 0.00 0.00 3.07
985 986 0.035439 ACTTGATCAATCCCGGCGTT 60.035 50.000 8.96 0.00 0.00 4.84
1251 1692 6.336566 CCTCCTCCACTCAATATATCAATCG 58.663 44.000 0.00 0.00 0.00 3.34
1312 1755 0.935898 CGGCATCTCTCATGCAGAAC 59.064 55.000 8.74 0.00 46.21 3.01
1659 2115 3.058224 GTGAACACAGGCTGGAAACATAC 60.058 47.826 20.34 5.26 41.51 2.39
1691 2147 0.396974 ACAAAGGGGTGAAGCTTGCA 60.397 50.000 2.10 0.00 0.00 4.08
1724 2180 1.731613 CGCCAGCGTTTACGACTCA 60.732 57.895 6.44 0.00 43.02 3.41
1760 2216 0.805711 GCAAAAGGCACACGCTTGTT 60.806 50.000 0.00 0.00 43.97 2.83
1782 2241 0.951558 CACGCCTTGCTGGTAGTTTT 59.048 50.000 0.00 0.00 38.35 2.43
1806 2265 8.973835 TTAAAGTTGTTGTTTTTAGGACTGTG 57.026 30.769 0.00 0.00 0.00 3.66
1816 2275 9.685828 TTGTTTTTAGGACTGTGCAATTAATAC 57.314 29.630 1.24 0.00 0.00 1.89
1824 2283 5.160641 ACTGTGCAATTAATACTTTTGCCG 58.839 37.500 7.96 1.15 43.91 5.69
2025 2492 4.023878 TGCTTAACCGGACATACAAACAAC 60.024 41.667 9.46 0.00 0.00 3.32
2031 2498 4.939439 ACCGGACATACAAACAACTATTCC 59.061 41.667 9.46 0.00 0.00 3.01
2129 2596 5.293569 CCTCCAGCAAAGGTATTAGTTTACG 59.706 44.000 0.00 0.00 0.00 3.18
2236 2703 2.170187 ACATGCTCCTCCATCTCTTCAC 59.830 50.000 0.00 0.00 0.00 3.18
2412 2879 2.095466 GCCAACTGCGCAAATGTTACTA 60.095 45.455 13.05 0.00 0.00 1.82
2522 2989 6.018994 GTGCAAACTATAAAGGTATGAGACGG 60.019 42.308 0.00 0.00 0.00 4.79
2705 3172 9.381038 TCTATAGACTTATTTCCATGGCTAAGT 57.619 33.333 23.25 23.25 37.18 2.24
2715 3182 3.018856 CCATGGCTAAGTGCATCTTCAA 58.981 45.455 0.00 0.00 45.15 2.69
2732 3199 0.449786 CAATACCGTGCCGCAAATCA 59.550 50.000 0.00 0.00 0.00 2.57
2742 3209 2.009774 GCCGCAAATCAGACACACTAT 58.990 47.619 0.00 0.00 0.00 2.12
2748 3215 5.103000 GCAAATCAGACACACTATACGTCT 58.897 41.667 0.00 0.00 40.60 4.18
2749 3216 6.263344 GCAAATCAGACACACTATACGTCTA 58.737 40.000 0.00 0.00 37.92 2.59
2752 3219 7.569639 AATCAGACACACTATACGTCTATGT 57.430 36.000 0.00 0.00 37.92 2.29
2757 3224 5.439721 ACACACTATACGTCTATGTACCCA 58.560 41.667 0.00 0.00 0.00 4.51
2761 3228 7.381408 CACACTATACGTCTATGTACCCAAATG 59.619 40.741 0.00 0.00 0.00 2.32
2801 3268 1.134220 TCCATACCTCAAATGTCCGCC 60.134 52.381 0.00 0.00 0.00 6.13
2811 3278 5.092554 TCAAATGTCCGCCTCTATTAACA 57.907 39.130 0.00 0.00 0.00 2.41
2873 3342 2.223665 GCCTTCAGCCAAATAGTCATGC 60.224 50.000 0.00 0.00 34.35 4.06
2885 3354 7.255590 GCCAAATAGTCATGCTTATACAATGGT 60.256 37.037 0.00 0.00 0.00 3.55
2887 3356 7.658179 AATAGTCATGCTTATACAATGGTCG 57.342 36.000 0.00 0.00 0.00 4.79
2906 3375 3.930848 GTCGTCCGTCAAATAAGAACCAT 59.069 43.478 0.00 0.00 0.00 3.55
2953 3423 1.285950 GGCCTTCGTCAAAGTTGGC 59.714 57.895 0.00 0.00 39.61 4.52
3021 3491 0.927767 GAGGAGAGAGGGGTAGTGGA 59.072 60.000 0.00 0.00 0.00 4.02
3022 3492 0.930726 AGGAGAGAGGGGTAGTGGAG 59.069 60.000 0.00 0.00 0.00 3.86
3028 3498 3.408853 GGGGTAGTGGAGTGGGGC 61.409 72.222 0.00 0.00 0.00 5.80
3038 3508 3.976701 GAGTGGGGCACGTGATGGG 62.977 68.421 22.23 0.00 39.64 4.00
3054 3524 2.765689 TGGGTTTTGATTGTCCAGGT 57.234 45.000 0.00 0.00 0.00 4.00
3111 3581 2.121291 TAGTGAAATTCGGCCATGCA 57.879 45.000 2.24 0.00 0.00 3.96
3123 3593 3.842126 CATGCAGACGCGTCCACG 61.842 66.667 34.08 23.52 42.97 4.94
3134 3605 1.138036 CGTCCACGGACTTATGCGA 59.862 57.895 14.12 0.00 43.37 5.10
3160 3631 7.153985 CACTATGTTGGATGACAAAAATGGTT 58.846 34.615 0.00 0.00 41.58 3.67
3161 3632 7.656948 CACTATGTTGGATGACAAAAATGGTTT 59.343 33.333 0.00 0.00 41.58 3.27
3171 3642 4.573900 ACAAAAATGGTTTGAACACTGCA 58.426 34.783 5.85 0.00 33.83 4.41
3186 3657 1.755959 ACTGCAGTTTGGATGTTTGCA 59.244 42.857 15.25 0.00 41.97 4.08
3189 3660 1.787012 CAGTTTGGATGTTTGCAGGC 58.213 50.000 0.00 0.00 0.00 4.85
3254 3726 5.914898 AACCACTTTTTGTAGTGCTCTTT 57.085 34.783 0.00 0.00 43.31 2.52
3255 3727 5.914898 ACCACTTTTTGTAGTGCTCTTTT 57.085 34.783 0.00 0.00 43.31 2.27
3266 3738 3.045601 GTGCTCTTTTCTAGGCACTCA 57.954 47.619 11.02 0.00 42.69 3.41
3267 3739 2.999355 GTGCTCTTTTCTAGGCACTCAG 59.001 50.000 11.02 0.00 42.69 3.35
3269 3741 3.324846 TGCTCTTTTCTAGGCACTCAGAA 59.675 43.478 0.00 0.00 41.75 3.02
3270 3742 3.932089 GCTCTTTTCTAGGCACTCAGAAG 59.068 47.826 0.00 0.00 41.75 2.85
3271 3743 4.322349 GCTCTTTTCTAGGCACTCAGAAGA 60.322 45.833 0.00 0.00 41.75 2.87
3386 3863 7.510675 TGTCCTTAATCCTTGGTCTATCTTT 57.489 36.000 0.00 0.00 0.00 2.52
3392 3869 5.707066 ATCCTTGGTCTATCTTTGAGCTT 57.293 39.130 0.00 0.00 33.59 3.74
3397 3874 6.376581 CCTTGGTCTATCTTTGAGCTTTGATT 59.623 38.462 0.00 0.00 33.59 2.57
3520 3997 6.403049 TGATATCGAGGACTTAAAAGCACAA 58.597 36.000 0.00 0.00 0.00 3.33
3617 4094 8.827177 ATTGTTCGTTTCATTTCTAGTACTCA 57.173 30.769 0.00 0.00 0.00 3.41
3648 4125 5.100344 TGATAGTGACGAAGAGGAGTACT 57.900 43.478 0.00 0.00 0.00 2.73
3693 4170 2.080693 CCGTGGATGAAATTGTTCCGA 58.919 47.619 0.00 0.00 32.28 4.55
3706 4183 2.777094 TGTTCCGATTCAAGATGTGCA 58.223 42.857 0.00 0.00 0.00 4.57
3768 4249 4.342951 TGGTGTTGTATATTACTCCCTCCG 59.657 45.833 0.00 0.00 0.00 4.63
3788 4269 4.221924 TCCGATCCAGAATAAGTGTTGTGA 59.778 41.667 0.00 0.00 0.00 3.58
3790 4271 5.586243 CCGATCCAGAATAAGTGTTGTGATT 59.414 40.000 0.00 0.00 0.00 2.57
3916 4397 3.445096 GCCAAGCTCAACAACTCCAATAT 59.555 43.478 0.00 0.00 0.00 1.28
3917 4398 4.439289 GCCAAGCTCAACAACTCCAATATC 60.439 45.833 0.00 0.00 0.00 1.63
3919 4400 2.939103 AGCTCAACAACTCCAATATCGC 59.061 45.455 0.00 0.00 0.00 4.58
3920 4401 2.032178 GCTCAACAACTCCAATATCGCC 59.968 50.000 0.00 0.00 0.00 5.54
3948 4429 9.196139 CCTCAAAGGTTGGGATGTTTAATATAA 57.804 33.333 0.00 0.00 30.85 0.98
3987 4468 7.482654 TGATAGTCACTTTGTTGAGAAACAG 57.517 36.000 0.00 0.00 33.73 3.16
4009 4490 6.269769 ACAGGGACAAATTCACAACCATAAAT 59.730 34.615 0.00 0.00 0.00 1.40
4011 4492 8.477256 CAGGGACAAATTCACAACCATAAATAT 58.523 33.333 0.00 0.00 0.00 1.28
4054 4536 9.647797 AATGTGAAACTATAACGTTATCACTCA 57.352 29.630 26.80 20.45 36.71 3.41
4094 4576 5.382573 TGAATAAGTTGTTTGCAAAACGC 57.617 34.783 14.67 6.73 42.89 4.84
4184 4666 9.522804 TTTTAAGTTTACATCAAAATTGCGTCT 57.477 25.926 0.00 0.00 35.35 4.18
4215 4698 8.903820 ACTTCTTATTGGCATAAATGTTACTCC 58.096 33.333 0.00 0.00 0.00 3.85
4216 4699 7.817418 TCTTATTGGCATAAATGTTACTCCC 57.183 36.000 0.00 0.00 0.00 4.30
4217 4700 7.582719 TCTTATTGGCATAAATGTTACTCCCT 58.417 34.615 0.00 0.00 0.00 4.20
4218 4701 7.719633 TCTTATTGGCATAAATGTTACTCCCTC 59.280 37.037 0.00 0.00 0.00 4.30
4219 4702 4.164843 TGGCATAAATGTTACTCCCTCC 57.835 45.455 0.00 0.00 0.00 4.30
4220 4703 3.139077 GGCATAAATGTTACTCCCTCCG 58.861 50.000 0.00 0.00 0.00 4.63
4221 4704 3.433173 GGCATAAATGTTACTCCCTCCGT 60.433 47.826 0.00 0.00 0.00 4.69
4222 4705 4.196971 GCATAAATGTTACTCCCTCCGTT 58.803 43.478 0.00 0.00 0.00 4.44
4223 4706 4.272748 GCATAAATGTTACTCCCTCCGTTC 59.727 45.833 0.00 0.00 0.00 3.95
4224 4707 2.667473 AATGTTACTCCCTCCGTTCG 57.333 50.000 0.00 0.00 0.00 3.95
4225 4708 0.822164 ATGTTACTCCCTCCGTTCGG 59.178 55.000 4.74 4.74 0.00 4.30
4226 4709 0.251297 TGTTACTCCCTCCGTTCGGA 60.251 55.000 13.34 13.34 0.00 4.55
4227 4710 0.890683 GTTACTCCCTCCGTTCGGAA 59.109 55.000 14.79 0.04 33.41 4.30
4228 4711 1.479730 GTTACTCCCTCCGTTCGGAAT 59.520 52.381 14.79 2.09 33.41 3.01
4229 4712 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
4230 4713 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4231 4714 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4232 4715 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4233 4716 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
4234 4717 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
4235 4718 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
4236 4719 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
4237 4720 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
4238 4721 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
4239 4722 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
4240 4723 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
4241 4724 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
4242 4725 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
4243 4726 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
4244 4727 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
4245 4728 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
4246 4729 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
4247 4730 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
4248 4731 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
4249 4732 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
4250 4733 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
4251 4734 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
4252 4735 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
4253 4736 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
4254 4737 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
4255 4738 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
4256 4739 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
4257 4740 6.068670 TGTCTCGGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
4258 4741 6.549736 TGTCTCGGAAATGGATGTATCTAGAA 59.450 38.462 0.00 0.00 0.00 2.10
4259 4742 6.864165 GTCTCGGAAATGGATGTATCTAGAAC 59.136 42.308 0.00 0.00 0.00 3.01
4260 4743 6.778069 TCTCGGAAATGGATGTATCTAGAACT 59.222 38.462 0.00 0.00 0.00 3.01
4261 4744 7.942894 TCTCGGAAATGGATGTATCTAGAACTA 59.057 37.037 0.00 0.00 0.00 2.24
4262 4745 8.473358 TCGGAAATGGATGTATCTAGAACTAA 57.527 34.615 0.00 0.00 0.00 2.24
4263 4746 8.920174 TCGGAAATGGATGTATCTAGAACTAAA 58.080 33.333 0.00 0.00 0.00 1.85
4264 4747 9.542462 CGGAAATGGATGTATCTAGAACTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
4289 4772 9.664332 AATACATCTAGATACATCCATTTCTGC 57.336 33.333 4.54 0.00 0.00 4.26
4290 4773 6.162079 ACATCTAGATACATCCATTTCTGCG 58.838 40.000 4.54 0.00 0.00 5.18
4291 4774 6.015095 ACATCTAGATACATCCATTTCTGCGA 60.015 38.462 4.54 0.00 0.00 5.10
4292 4775 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
4293 4776 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
4294 4777 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
4295 4778 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
4296 4779 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
4297 4780 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
4298 4781 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
4299 4782 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
4300 4783 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
4301 4784 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
4302 4785 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
4303 4786 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
4304 4787 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
4305 4788 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
4306 4789 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
4307 4790 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
4308 4791 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
4309 4792 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
4310 4793 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
4311 4794 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
4312 4795 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
4313 4796 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
4314 4797 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4315 4798 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
4316 4799 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
4357 4841 7.195374 ACCAGTCATGCTATTAAGGAAGTAA 57.805 36.000 0.00 0.00 0.00 2.24
4366 4850 8.741603 TGCTATTAAGGAAGTAAATTGTACCC 57.258 34.615 0.00 0.00 0.00 3.69
4367 4851 7.776500 TGCTATTAAGGAAGTAAATTGTACCCC 59.224 37.037 0.00 0.00 0.00 4.95
4368 4852 7.230108 GCTATTAAGGAAGTAAATTGTACCCCC 59.770 40.741 0.00 0.00 0.00 5.40
4369 4853 6.723471 TTAAGGAAGTAAATTGTACCCCCT 57.277 37.500 0.00 0.00 0.00 4.79
4370 4854 4.857130 AGGAAGTAAATTGTACCCCCTC 57.143 45.455 0.00 0.00 0.00 4.30
4371 4855 3.526430 AGGAAGTAAATTGTACCCCCTCC 59.474 47.826 0.00 0.00 0.00 4.30
4372 4856 3.267551 GGAAGTAAATTGTACCCCCTCCA 59.732 47.826 0.00 0.00 0.00 3.86
4373 4857 4.079385 GGAAGTAAATTGTACCCCCTCCAT 60.079 45.833 0.00 0.00 0.00 3.41
4374 4858 4.790718 AGTAAATTGTACCCCCTCCATC 57.209 45.455 0.00 0.00 0.00 3.51
4375 4859 3.462205 AGTAAATTGTACCCCCTCCATCC 59.538 47.826 0.00 0.00 0.00 3.51
4376 4860 1.231963 AATTGTACCCCCTCCATCCC 58.768 55.000 0.00 0.00 0.00 3.85
4377 4861 0.047176 ATTGTACCCCCTCCATCCCA 59.953 55.000 0.00 0.00 0.00 4.37
4378 4862 0.047176 TTGTACCCCCTCCATCCCAT 59.953 55.000 0.00 0.00 0.00 4.00
4379 4863 0.953430 TGTACCCCCTCCATCCCATA 59.047 55.000 0.00 0.00 0.00 2.74
4380 4864 1.298693 TGTACCCCCTCCATCCCATAA 59.701 52.381 0.00 0.00 0.00 1.90
4381 4865 2.089059 TGTACCCCCTCCATCCCATAAT 60.089 50.000 0.00 0.00 0.00 1.28
4382 4866 3.147028 TGTACCCCCTCCATCCCATAATA 59.853 47.826 0.00 0.00 0.00 0.98
4383 4867 3.621173 ACCCCCTCCATCCCATAATAT 57.379 47.619 0.00 0.00 0.00 1.28
4384 4868 4.746206 ACCCCCTCCATCCCATAATATA 57.254 45.455 0.00 0.00 0.00 0.86
4385 4869 5.062844 ACCCCCTCCATCCCATAATATAA 57.937 43.478 0.00 0.00 0.00 0.98
4386 4870 5.046522 ACCCCCTCCATCCCATAATATAAG 58.953 45.833 0.00 0.00 0.00 1.73
4387 4871 5.223189 ACCCCCTCCATCCCATAATATAAGA 60.223 44.000 0.00 0.00 0.00 2.10
4388 4872 5.370880 CCCCCTCCATCCCATAATATAAGAG 59.629 48.000 0.00 0.00 0.00 2.85
4389 4873 5.163152 CCCCTCCATCCCATAATATAAGAGC 60.163 48.000 0.00 0.00 0.00 4.09
4390 4874 5.429762 CCCTCCATCCCATAATATAAGAGCA 59.570 44.000 0.00 0.00 0.00 4.26
4391 4875 6.102321 CCCTCCATCCCATAATATAAGAGCAT 59.898 42.308 0.00 0.00 0.00 3.79
4392 4876 7.367186 CCCTCCATCCCATAATATAAGAGCATT 60.367 40.741 0.00 0.00 0.00 3.56
4393 4877 8.057623 CCTCCATCCCATAATATAAGAGCATTT 58.942 37.037 0.00 0.00 0.00 2.32
4394 4878 9.471702 CTCCATCCCATAATATAAGAGCATTTT 57.528 33.333 0.00 0.00 0.00 1.82
4395 4879 9.827198 TCCATCCCATAATATAAGAGCATTTTT 57.173 29.630 0.00 0.00 0.00 1.94
4396 4880 9.865321 CCATCCCATAATATAAGAGCATTTTTG 57.135 33.333 0.00 0.00 0.00 2.44
4399 4883 9.639563 TCCCATAATATAAGAGCATTTTTGACA 57.360 29.630 0.00 0.00 0.00 3.58
4400 4884 9.683069 CCCATAATATAAGAGCATTTTTGACAC 57.317 33.333 0.00 0.00 0.00 3.67
4408 4892 7.426929 AAGAGCATTTTTGACACTAGTGTAG 57.573 36.000 27.98 12.67 45.05 2.74
4409 4893 6.525629 AGAGCATTTTTGACACTAGTGTAGT 58.474 36.000 27.98 6.32 45.05 2.73
4443 4927 9.267071 TCGATTTTATATTATGGGATGGAGAGA 57.733 33.333 0.00 0.00 0.00 3.10
4444 4928 9.539825 CGATTTTATATTATGGGATGGAGAGAG 57.460 37.037 0.00 0.00 0.00 3.20
4503 4991 2.922387 CACGAGAGCTCAACATCTTCTG 59.078 50.000 17.77 2.42 0.00 3.02
4509 4997 4.769488 AGAGCTCAACATCTTCTGACACTA 59.231 41.667 17.77 0.00 0.00 2.74
4598 5086 9.360901 TGTATCTGATCTACAAATAGCTCTTCT 57.639 33.333 0.00 0.00 0.00 2.85
4653 5141 2.096218 GTCTGTTTCACGCATGAAGTCC 60.096 50.000 0.00 0.00 45.54 3.85
4655 5143 2.290367 CTGTTTCACGCATGAAGTCCAA 59.710 45.455 0.00 0.00 45.54 3.53
4667 5155 3.753815 TGAAGTCCAACATCTGAATGCA 58.246 40.909 0.00 0.00 36.26 3.96
4668 5156 4.338012 TGAAGTCCAACATCTGAATGCAT 58.662 39.130 0.00 0.00 36.26 3.96
4669 5157 5.499313 TGAAGTCCAACATCTGAATGCATA 58.501 37.500 0.00 0.00 36.26 3.14
4671 5159 3.873361 AGTCCAACATCTGAATGCATACG 59.127 43.478 0.00 0.00 36.26 3.06
4675 5163 4.794762 CCAACATCTGAATGCATACGTTTG 59.205 41.667 0.00 0.00 36.26 2.93
4676 5164 5.393124 CAACATCTGAATGCATACGTTTGT 58.607 37.500 0.00 0.00 36.26 2.83
4677 5165 5.627499 ACATCTGAATGCATACGTTTGTT 57.373 34.783 0.00 0.00 36.26 2.83
4678 5166 6.012658 ACATCTGAATGCATACGTTTGTTT 57.987 33.333 0.00 2.50 36.26 2.83
4680 5168 6.582295 ACATCTGAATGCATACGTTTGTTTTC 59.418 34.615 0.00 10.70 36.26 2.29
4681 5169 6.312399 TCTGAATGCATACGTTTGTTTTCT 57.688 33.333 0.00 0.00 0.00 2.52
4683 5171 6.017523 TCTGAATGCATACGTTTGTTTTCTGA 60.018 34.615 18.21 18.21 0.00 3.27
4685 5173 7.144661 TGAATGCATACGTTTGTTTTCTGAAT 58.855 30.769 0.00 0.00 0.00 2.57
4738 5253 6.183361 TGACATAAGGTTTTTCTACCAGTGGA 60.183 38.462 18.40 0.00 40.82 4.02
4772 5287 0.853586 TGGACCCCCTAATGGCCTTT 60.854 55.000 3.32 6.72 0.00 3.11
4773 5288 0.338467 GGACCCCCTAATGGCCTTTT 59.662 55.000 9.46 2.91 0.00 2.27
4836 5351 1.067516 GCAACTTTCAAGAGCAGGCAA 59.932 47.619 0.00 0.00 33.26 4.52
4840 5355 3.026694 ACTTTCAAGAGCAGGCAAGTTT 58.973 40.909 0.00 0.00 0.00 2.66
4969 5491 5.876612 TTAATTTTGTCCAATTGGCATGC 57.123 34.783 20.33 9.90 34.44 4.06
4983 5505 2.427812 TGGCATGCACAATGATAAGTGG 59.572 45.455 21.36 0.00 38.72 4.00
5015 5537 4.024725 TGCAGTTTCCAATGTTACGTGTAC 60.025 41.667 0.00 0.00 0.00 2.90
5026 5548 7.358931 CCAATGTTACGTGTACGGATGAATATC 60.359 40.741 9.40 0.00 44.95 1.63
5069 5591 6.644248 AAAGGGTCGCTTTAAAGTAACAAT 57.356 33.333 16.38 5.19 0.00 2.71
5186 5708 9.249053 TGGCACTATCATTTCTTATTTGGTTAA 57.751 29.630 0.00 0.00 0.00 2.01
5331 5856 8.621286 ACTTACAACAAATCTAACACCTTCAAG 58.379 33.333 0.00 0.00 0.00 3.02
5353 5878 9.567776 TCAAGTTTTTAGAATCACAATCCTGTA 57.432 29.630 0.00 0.00 33.22 2.74
5371 5896 5.770663 TCCTGTACACTGCCTAGATAATCTC 59.229 44.000 0.00 0.00 0.00 2.75
5373 5898 5.131067 TGTACACTGCCTAGATAATCTCGT 58.869 41.667 0.00 0.00 0.00 4.18
5376 5901 4.402793 ACACTGCCTAGATAATCTCGTTGT 59.597 41.667 0.00 0.00 0.00 3.32
5391 5916 6.540438 TCTCGTTGTCTATATTTTGGGACT 57.460 37.500 0.00 0.00 0.00 3.85
5393 5918 5.424757 TCGTTGTCTATATTTTGGGACTGG 58.575 41.667 0.00 0.00 0.00 4.00
5401 5926 9.220767 GTCTATATTTTGGGACTGGAACATATC 57.779 37.037 0.00 0.00 38.20 1.63
5409 5934 6.140377 TGGGACTGGAACATATCTGTACATA 58.860 40.000 0.00 0.00 38.20 2.29
5442 5967 3.002791 ACTTGCACAATGGTCATCTACG 58.997 45.455 0.00 0.00 0.00 3.51
5468 5993 8.040727 GTGTCCTACATATGCCATATTCACATA 58.959 37.037 1.58 0.00 0.00 2.29
5538 6063 6.613153 ATGAGGTAATAGGAAGCATCTACC 57.387 41.667 0.00 0.00 0.00 3.18
5540 6065 3.833070 AGGTAATAGGAAGCATCTACCCG 59.167 47.826 2.49 0.00 31.05 5.28
5771 6297 9.753674 AGAAAAGGGTAATTACATTGATCTTCA 57.246 29.630 17.16 0.00 0.00 3.02
5856 6382 6.014669 TGCAAAAGGGTAATTACATTGCTCTT 60.015 34.615 28.16 16.18 45.74 2.85
5876 6402 1.074405 TCATGTTTTCTGGCAGAGGCT 59.926 47.619 17.91 0.00 40.87 4.58
5937 6463 9.484806 AAGTACAAGGGCTATAGTTACTTAAGA 57.515 33.333 10.09 0.00 0.00 2.10
5942 6468 7.304497 AGGGCTATAGTTACTTAAGATGGTG 57.696 40.000 10.09 0.00 0.00 4.17
6094 6625 4.998671 TGTGCTTCTAGAAGAGATCCAG 57.001 45.455 32.16 7.97 40.79 3.86
6149 6680 8.065407 TGTATTTACACTTACAAACTTGAAGCG 58.935 33.333 0.00 0.00 0.00 4.68
6150 6681 3.334272 ACACTTACAAACTTGAAGCGC 57.666 42.857 0.00 0.00 0.00 5.92
6195 6738 6.177610 AGTACTCAAACACTTGACCTTTGAA 58.822 36.000 0.00 0.00 36.62 2.69
6201 6744 9.364989 CTCAAACACTTGACCTTTGAATTTTTA 57.635 29.630 0.00 0.00 36.62 1.52
6218 6762 8.933653 TGAATTTTTAAAAGAAAGGGTGGATCT 58.066 29.630 0.14 0.00 0.00 2.75
6240 6784 6.327934 TCTCGATTTCCTTTAGTAGAAACCG 58.672 40.000 0.00 0.00 39.79 4.44
6249 6793 8.454570 TCCTTTAGTAGAAACCGAAACAAAAT 57.545 30.769 0.00 0.00 0.00 1.82
6255 6799 5.331876 AGAAACCGAAACAAAATTGGACA 57.668 34.783 0.00 0.00 0.00 4.02
6256 6800 5.348164 AGAAACCGAAACAAAATTGGACAG 58.652 37.500 0.00 0.00 0.00 3.51
6257 6801 3.726291 ACCGAAACAAAATTGGACAGG 57.274 42.857 0.00 0.00 0.00 4.00
6268 6812 2.549064 TTGGACAGGTCTCACACATG 57.451 50.000 0.00 0.00 42.82 3.21
6273 6817 3.449018 GGACAGGTCTCACACATGATACT 59.551 47.826 0.00 0.00 39.27 2.12
6307 6851 8.793592 ACAAAACCTGTGAGAAAGGAATTATAC 58.206 33.333 0.00 0.00 36.69 1.47
6308 6852 8.792633 CAAAACCTGTGAGAAAGGAATTATACA 58.207 33.333 0.00 0.00 38.27 2.29
6381 6929 3.287867 AATGGTGAGCTGAACATAGGG 57.712 47.619 3.45 0.00 0.00 3.53
6389 6937 0.447801 CTGAACATAGGGCGCACAAC 59.552 55.000 14.57 0.00 0.00 3.32
6405 6953 4.674101 CGCACAACAAAAGGAAAGAAGACA 60.674 41.667 0.00 0.00 0.00 3.41
6424 6972 1.191647 CACAAACTAGTCGTCCAACGC 59.808 52.381 0.00 0.00 42.21 4.84
6430 6978 0.322277 TAGTCGTCCAACGCCTCTCT 60.322 55.000 0.00 0.00 42.21 3.10
6438 6986 0.891373 CAACGCCTCTCTCTCCTCAA 59.109 55.000 0.00 0.00 0.00 3.02
6459 7008 2.530460 TTTGGATCCATGGGGTTCAG 57.470 50.000 17.06 0.00 35.03 3.02
6465 7014 2.584835 TCCATGGGGTTCAGTTCTTG 57.415 50.000 13.02 0.00 34.93 3.02
6483 7032 5.155278 TCTTGTGTTATGACCGGTGTAAT 57.845 39.130 14.63 5.42 0.00 1.89
6492 7041 3.719924 TGACCGGTGTAATTTATAGCCG 58.280 45.455 14.63 0.00 38.99 5.52
6632 9167 6.131961 AGCAATAAGACAATTCTATTGCCCT 58.868 36.000 17.82 3.25 42.48 5.19
6636 9171 3.973425 AGACAATTCTATTGCCCTGCTT 58.027 40.909 0.00 0.00 0.00 3.91
6658 9193 0.976590 AGAGGAGCCGGAACCCTAAC 60.977 60.000 5.05 0.00 0.00 2.34
6660 9195 2.295602 GGAGCCGGAACCCTAACCA 61.296 63.158 5.05 0.00 0.00 3.67
6681 9235 3.061848 CGCCGCCTTTTCCACCAT 61.062 61.111 0.00 0.00 0.00 3.55
6682 9236 2.573340 GCCGCCTTTTCCACCATG 59.427 61.111 0.00 0.00 0.00 3.66
6683 9237 2.275380 GCCGCCTTTTCCACCATGT 61.275 57.895 0.00 0.00 0.00 3.21
6690 9244 2.549992 CCTTTTCCACCATGTGAGACGA 60.550 50.000 0.00 0.00 35.23 4.20
6699 9253 2.125912 GTGAGACGACGCCAGCAT 60.126 61.111 0.00 0.00 0.00 3.79
6755 9309 0.613777 CTTTCCCCTACAAGCTCCGT 59.386 55.000 0.00 0.00 0.00 4.69
6790 9344 4.904895 GAACCCTAGTTCCTACCACTTT 57.095 45.455 0.00 0.00 45.65 2.66
6791 9345 4.576879 GAACCCTAGTTCCTACCACTTTG 58.423 47.826 0.00 0.00 45.65 2.77
6792 9346 2.910977 ACCCTAGTTCCTACCACTTTGG 59.089 50.000 0.00 0.00 45.02 3.28
6794 9348 7.710078 GAACCCTAGTTCCTACCACTTTGGTA 61.710 46.154 4.99 4.99 46.76 3.25
6795 9349 8.949123 GAACCCTAGTTCCTACCACTTTGGTAT 61.949 44.444 5.53 0.00 46.76 2.73
6804 9358 3.550437 CCACTTTGGTATCAGCTAGCT 57.450 47.619 12.68 12.68 31.35 3.32
6805 9359 3.462021 CCACTTTGGTATCAGCTAGCTC 58.538 50.000 16.15 3.04 31.35 4.09
6806 9360 3.119291 CACTTTGGTATCAGCTAGCTCG 58.881 50.000 16.15 10.94 0.00 5.03
6807 9361 2.101582 ACTTTGGTATCAGCTAGCTCGG 59.898 50.000 16.15 4.79 0.00 4.63
6808 9362 1.776662 TTGGTATCAGCTAGCTCGGT 58.223 50.000 16.15 9.63 0.00 4.69
6809 9363 1.776662 TGGTATCAGCTAGCTCGGTT 58.223 50.000 16.15 2.48 0.00 4.44
6810 9364 1.681793 TGGTATCAGCTAGCTCGGTTC 59.318 52.381 16.15 5.64 0.00 3.62
6811 9365 1.000052 GGTATCAGCTAGCTCGGTTCC 60.000 57.143 16.15 10.40 0.00 3.62
6812 9366 0.952280 TATCAGCTAGCTCGGTTCCG 59.048 55.000 16.15 1.42 0.00 4.30
6813 9367 0.752009 ATCAGCTAGCTCGGTTCCGA 60.752 55.000 16.15 13.34 36.95 4.55
6814 9368 0.752009 TCAGCTAGCTCGGTTCCGAT 60.752 55.000 16.15 3.64 37.83 4.18
6815 9369 0.103208 CAGCTAGCTCGGTTCCGATT 59.897 55.000 16.15 8.65 37.83 3.34
6816 9370 1.337071 CAGCTAGCTCGGTTCCGATTA 59.663 52.381 16.15 9.27 37.83 1.75
6817 9371 2.029828 CAGCTAGCTCGGTTCCGATTAT 60.030 50.000 16.15 6.36 37.83 1.28
6818 9372 2.029828 AGCTAGCTCGGTTCCGATTATG 60.030 50.000 12.68 4.33 37.83 1.90
6819 9373 2.288273 GCTAGCTCGGTTCCGATTATGT 60.288 50.000 14.34 1.26 37.83 2.29
6820 9374 2.510768 AGCTCGGTTCCGATTATGTC 57.489 50.000 14.34 0.81 37.83 3.06
6821 9375 2.032620 AGCTCGGTTCCGATTATGTCT 58.967 47.619 14.34 2.82 37.83 3.41
6822 9376 2.431057 AGCTCGGTTCCGATTATGTCTT 59.569 45.455 14.34 0.00 37.83 3.01
6823 9377 2.795470 GCTCGGTTCCGATTATGTCTTC 59.205 50.000 14.34 0.00 37.83 2.87
6824 9378 3.043586 CTCGGTTCCGATTATGTCTTCG 58.956 50.000 14.34 0.00 37.83 3.79
6825 9379 1.521423 CGGTTCCGATTATGTCTTCGC 59.479 52.381 5.19 0.00 34.10 4.70
6826 9380 1.865340 GGTTCCGATTATGTCTTCGCC 59.135 52.381 0.00 0.00 34.10 5.54
6827 9381 1.521423 GTTCCGATTATGTCTTCGCCG 59.479 52.381 0.00 0.00 34.10 6.46
6828 9382 0.596600 TCCGATTATGTCTTCGCCGC 60.597 55.000 0.00 0.00 34.10 6.53
6829 9383 1.557443 CCGATTATGTCTTCGCCGCC 61.557 60.000 0.00 0.00 34.10 6.13
6830 9384 1.853319 GATTATGTCTTCGCCGCCG 59.147 57.895 0.00 0.00 0.00 6.46
6831 9385 2.159272 GATTATGTCTTCGCCGCCGC 62.159 60.000 0.00 0.00 0.00 6.53
6832 9386 4.884257 TATGTCTTCGCCGCCGCC 62.884 66.667 0.00 0.00 0.00 6.13
6847 9401 4.048470 GCCCACCCCAACCCTCTC 62.048 72.222 0.00 0.00 0.00 3.20
6848 9402 3.717294 CCCACCCCAACCCTCTCG 61.717 72.222 0.00 0.00 0.00 4.04
6849 9403 4.410400 CCACCCCAACCCTCTCGC 62.410 72.222 0.00 0.00 0.00 5.03
6850 9404 3.322466 CACCCCAACCCTCTCGCT 61.322 66.667 0.00 0.00 0.00 4.93
6851 9405 3.322466 ACCCCAACCCTCTCGCTG 61.322 66.667 0.00 0.00 0.00 5.18
6852 9406 3.322466 CCCCAACCCTCTCGCTGT 61.322 66.667 0.00 0.00 0.00 4.40
6853 9407 2.266055 CCCAACCCTCTCGCTGTC 59.734 66.667 0.00 0.00 0.00 3.51
6854 9408 2.266055 CCAACCCTCTCGCTGTCC 59.734 66.667 0.00 0.00 0.00 4.02
6855 9409 2.583441 CCAACCCTCTCGCTGTCCA 61.583 63.158 0.00 0.00 0.00 4.02
6856 9410 1.374758 CAACCCTCTCGCTGTCCAC 60.375 63.158 0.00 0.00 0.00 4.02
6857 9411 2.584391 AACCCTCTCGCTGTCCACC 61.584 63.158 0.00 0.00 0.00 4.61
6858 9412 4.135153 CCCTCTCGCTGTCCACCG 62.135 72.222 0.00 0.00 0.00 4.94
6859 9413 4.803426 CCTCTCGCTGTCCACCGC 62.803 72.222 0.00 0.00 0.00 5.68
6860 9414 4.803426 CTCTCGCTGTCCACCGCC 62.803 72.222 0.00 0.00 0.00 6.13
6876 9430 4.244463 CCACCACCGACCCGTTGT 62.244 66.667 0.00 0.00 0.00 3.32
6877 9431 2.663852 CACCACCGACCCGTTGTC 60.664 66.667 0.00 0.00 40.81 3.18
6878 9432 3.932483 ACCACCGACCCGTTGTCC 61.932 66.667 0.00 0.00 41.18 4.02
6879 9433 3.931247 CCACCGACCCGTTGTCCA 61.931 66.667 0.00 0.00 41.18 4.02
6880 9434 2.663852 CACCGACCCGTTGTCCAC 60.664 66.667 0.00 0.00 41.18 4.02
6881 9435 3.932483 ACCGACCCGTTGTCCACC 61.932 66.667 0.00 0.00 41.18 4.61
6882 9436 3.622826 CCGACCCGTTGTCCACCT 61.623 66.667 0.00 0.00 41.18 4.00
6883 9437 2.048503 CGACCCGTTGTCCACCTC 60.049 66.667 0.00 0.00 41.18 3.85
6884 9438 2.048503 GACCCGTTGTCCACCTCG 60.049 66.667 0.00 0.00 38.09 4.63
6885 9439 3.584868 GACCCGTTGTCCACCTCGG 62.585 68.421 0.00 0.00 42.22 4.63
6888 9442 4.308458 CGTTGTCCACCTCGGCCA 62.308 66.667 2.24 0.00 33.14 5.36
6889 9443 2.358737 GTTGTCCACCTCGGCCAG 60.359 66.667 2.24 0.00 33.14 4.85
6890 9444 4.329545 TTGTCCACCTCGGCCAGC 62.330 66.667 2.24 0.00 33.14 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.993081 CGGCTATTTCAGATGGTGAGATC 59.007 47.826 0.00 0.00 36.21 2.75
1 2 3.244353 CCGGCTATTTCAGATGGTGAGAT 60.244 47.826 0.00 0.00 36.21 2.75
2 3 2.103094 CCGGCTATTTCAGATGGTGAGA 59.897 50.000 0.00 0.00 36.21 3.27
3 4 2.487934 CCGGCTATTTCAGATGGTGAG 58.512 52.381 0.00 0.00 36.21 3.51
4 5 1.475034 GCCGGCTATTTCAGATGGTGA 60.475 52.381 22.15 0.00 0.00 4.02
5 6 0.947244 GCCGGCTATTTCAGATGGTG 59.053 55.000 22.15 0.00 0.00 4.17
6 7 0.546122 TGCCGGCTATTTCAGATGGT 59.454 50.000 29.70 0.00 0.00 3.55
7 8 1.605710 CTTGCCGGCTATTTCAGATGG 59.394 52.381 29.70 0.21 0.00 3.51
8 9 2.564771 TCTTGCCGGCTATTTCAGATG 58.435 47.619 29.70 6.84 0.00 2.90
9 10 3.118261 TCTTCTTGCCGGCTATTTCAGAT 60.118 43.478 29.70 0.00 0.00 2.90
10 11 2.236146 TCTTCTTGCCGGCTATTTCAGA 59.764 45.455 29.70 17.48 0.00 3.27
11 12 2.352960 GTCTTCTTGCCGGCTATTTCAG 59.647 50.000 29.70 15.44 0.00 3.02
12 13 2.356135 GTCTTCTTGCCGGCTATTTCA 58.644 47.619 29.70 1.94 0.00 2.69
13 14 1.327764 CGTCTTCTTGCCGGCTATTTC 59.672 52.381 29.70 10.85 0.00 2.17
14 15 1.066430 TCGTCTTCTTGCCGGCTATTT 60.066 47.619 29.70 0.00 0.00 1.40
15 16 0.535335 TCGTCTTCTTGCCGGCTATT 59.465 50.000 29.70 0.00 0.00 1.73
16 17 0.103208 CTCGTCTTCTTGCCGGCTAT 59.897 55.000 29.70 0.00 0.00 2.97
17 18 1.511305 CTCGTCTTCTTGCCGGCTA 59.489 57.895 29.70 20.51 0.00 3.93
18 19 2.262915 CTCGTCTTCTTGCCGGCT 59.737 61.111 29.70 0.00 0.00 5.52
19 20 2.815647 CCTCGTCTTCTTGCCGGC 60.816 66.667 22.73 22.73 0.00 6.13
20 21 1.945354 TAGCCTCGTCTTCTTGCCGG 61.945 60.000 0.00 0.00 0.00 6.13
21 22 0.103208 ATAGCCTCGTCTTCTTGCCG 59.897 55.000 0.00 0.00 0.00 5.69
22 23 1.859383 GATAGCCTCGTCTTCTTGCC 58.141 55.000 0.00 0.00 0.00 4.52
23 24 1.482278 CGATAGCCTCGTCTTCTTGC 58.518 55.000 0.00 0.00 42.56 4.01
24 25 1.866063 GCCGATAGCCTCGTCTTCTTG 60.866 57.143 5.67 0.00 46.18 3.02
25 26 0.386113 GCCGATAGCCTCGTCTTCTT 59.614 55.000 5.67 0.00 46.18 2.52
26 27 0.466555 AGCCGATAGCCTCGTCTTCT 60.467 55.000 5.67 0.00 46.18 2.85
27 28 0.386113 AAGCCGATAGCCTCGTCTTC 59.614 55.000 5.67 0.00 41.39 2.87
28 29 2.506065 AAGCCGATAGCCTCGTCTT 58.494 52.632 5.67 1.69 46.18 3.01
29 30 0.466555 AGAAGCCGATAGCCTCGTCT 60.467 55.000 5.67 0.00 46.18 4.18
30 31 0.039888 GAGAAGCCGATAGCCTCGTC 60.040 60.000 5.67 0.00 46.18 4.20
31 32 1.787057 CGAGAAGCCGATAGCCTCGT 61.787 60.000 0.00 0.00 46.18 4.18
32 33 1.081774 CGAGAAGCCGATAGCCTCG 60.082 63.158 0.00 0.00 43.57 4.63
33 34 0.039888 GTCGAGAAGCCGATAGCCTC 60.040 60.000 0.00 0.00 45.47 4.70
34 35 1.787057 CGTCGAGAAGCCGATAGCCT 61.787 60.000 0.00 0.00 45.47 4.58
35 36 1.370657 CGTCGAGAAGCCGATAGCC 60.371 63.158 0.00 0.00 45.47 3.93
36 37 0.657951 GACGTCGAGAAGCCGATAGC 60.658 60.000 0.00 0.00 40.91 2.97
37 38 0.656259 TGACGTCGAGAAGCCGATAG 59.344 55.000 11.62 0.00 40.91 2.08
38 39 1.263484 GATGACGTCGAGAAGCCGATA 59.737 52.381 11.62 0.00 40.91 2.92
39 40 0.029567 GATGACGTCGAGAAGCCGAT 59.970 55.000 11.62 0.00 40.91 4.18
40 41 1.303091 TGATGACGTCGAGAAGCCGA 61.303 55.000 11.62 0.00 36.06 5.54
41 42 0.248661 ATGATGACGTCGAGAAGCCG 60.249 55.000 11.62 0.00 0.00 5.52
42 43 2.776312 TATGATGACGTCGAGAAGCC 57.224 50.000 11.62 0.00 0.00 4.35
43 44 4.352039 TCTTTATGATGACGTCGAGAAGC 58.648 43.478 11.62 0.00 0.00 3.86
44 45 6.202226 TGATCTTTATGATGACGTCGAGAAG 58.798 40.000 11.62 8.90 35.14 2.85
45 46 6.131544 TGATCTTTATGATGACGTCGAGAA 57.868 37.500 11.62 0.00 35.14 2.87
46 47 5.751243 TGATCTTTATGATGACGTCGAGA 57.249 39.130 11.62 5.77 35.14 4.04
47 48 5.282544 CGATGATCTTTATGATGACGTCGAG 59.717 44.000 11.62 0.49 39.09 4.04
48 49 5.147162 CGATGATCTTTATGATGACGTCGA 58.853 41.667 11.62 0.26 39.09 4.20
49 50 4.912187 ACGATGATCTTTATGATGACGTCG 59.088 41.667 11.62 0.00 40.85 5.12
50 51 5.915196 TGACGATGATCTTTATGATGACGTC 59.085 40.000 9.11 9.11 43.32 4.34
51 52 5.831997 TGACGATGATCTTTATGATGACGT 58.168 37.500 0.00 0.00 37.43 4.34
52 53 6.583806 TCATGACGATGATCTTTATGATGACG 59.416 38.462 2.87 0.00 33.40 4.35
53 54 7.880059 TCATGACGATGATCTTTATGATGAC 57.120 36.000 2.87 0.00 33.40 3.06
54 55 8.362639 TCTTCATGACGATGATCTTTATGATGA 58.637 33.333 13.94 13.94 38.43 2.92
55 56 8.530269 TCTTCATGACGATGATCTTTATGATG 57.470 34.615 7.11 9.25 38.43 3.07
56 57 7.818446 CCTCTTCATGACGATGATCTTTATGAT 59.182 37.037 7.11 0.00 38.43 2.45
57 58 7.014615 TCCTCTTCATGACGATGATCTTTATGA 59.985 37.037 1.90 2.87 38.43 2.15
58 59 7.150640 TCCTCTTCATGACGATGATCTTTATG 58.849 38.462 1.90 0.00 38.43 1.90
59 60 7.295322 TCCTCTTCATGACGATGATCTTTAT 57.705 36.000 1.90 0.00 38.43 1.40
60 61 6.715347 TCCTCTTCATGACGATGATCTTTA 57.285 37.500 1.90 0.00 38.43 1.85
61 62 5.604758 TCCTCTTCATGACGATGATCTTT 57.395 39.130 1.90 0.00 38.43 2.52
62 63 5.362143 TCTTCCTCTTCATGACGATGATCTT 59.638 40.000 7.79 0.00 38.43 2.40
63 64 4.892345 TCTTCCTCTTCATGACGATGATCT 59.108 41.667 7.79 0.00 38.43 2.75
64 65 5.193663 TCTTCCTCTTCATGACGATGATC 57.806 43.478 7.79 0.00 38.43 2.92
65 66 5.128499 ACTTCTTCCTCTTCATGACGATGAT 59.872 40.000 7.79 0.00 38.43 2.45
66 67 4.464244 ACTTCTTCCTCTTCATGACGATGA 59.536 41.667 1.90 2.80 36.78 2.92
67 68 4.753233 ACTTCTTCCTCTTCATGACGATG 58.247 43.478 1.90 0.25 0.00 3.84
68 69 4.439426 CGACTTCTTCCTCTTCATGACGAT 60.439 45.833 1.90 0.00 0.00 3.73
69 70 3.119814 CGACTTCTTCCTCTTCATGACGA 60.120 47.826 0.00 0.00 0.00 4.20
70 71 3.119814 TCGACTTCTTCCTCTTCATGACG 60.120 47.826 0.00 0.00 0.00 4.35
71 72 4.442375 TCGACTTCTTCCTCTTCATGAC 57.558 45.455 0.00 0.00 0.00 3.06
72 73 4.619394 GCTTCGACTTCTTCCTCTTCATGA 60.619 45.833 0.00 0.00 0.00 3.07
73 74 3.616379 GCTTCGACTTCTTCCTCTTCATG 59.384 47.826 0.00 0.00 0.00 3.07
74 75 3.259374 TGCTTCGACTTCTTCCTCTTCAT 59.741 43.478 0.00 0.00 0.00 2.57
75 76 2.628178 TGCTTCGACTTCTTCCTCTTCA 59.372 45.455 0.00 0.00 0.00 3.02
76 77 3.057174 TCTGCTTCGACTTCTTCCTCTTC 60.057 47.826 0.00 0.00 0.00 2.87
77 78 2.894126 TCTGCTTCGACTTCTTCCTCTT 59.106 45.455 0.00 0.00 0.00 2.85
78 79 2.520069 TCTGCTTCGACTTCTTCCTCT 58.480 47.619 0.00 0.00 0.00 3.69
79 80 3.518634 ATCTGCTTCGACTTCTTCCTC 57.481 47.619 0.00 0.00 0.00 3.71
80 81 3.971245 AATCTGCTTCGACTTCTTCCT 57.029 42.857 0.00 0.00 0.00 3.36
81 82 6.508721 CGAATAAATCTGCTTCGACTTCTTCC 60.509 42.308 0.00 0.00 43.24 3.46
82 83 6.253727 TCGAATAAATCTGCTTCGACTTCTTC 59.746 38.462 2.79 0.00 43.99 2.87
83 84 6.100004 TCGAATAAATCTGCTTCGACTTCTT 58.900 36.000 2.79 0.00 43.99 2.52
84 85 5.651530 TCGAATAAATCTGCTTCGACTTCT 58.348 37.500 2.79 0.00 43.99 2.85
85 86 5.950965 TCGAATAAATCTGCTTCGACTTC 57.049 39.130 2.79 0.00 43.99 3.01
89 90 2.534349 GCGTCGAATAAATCTGCTTCGA 59.466 45.455 0.00 2.79 45.91 3.71
90 91 2.654003 CGCGTCGAATAAATCTGCTTCG 60.654 50.000 0.00 0.00 42.24 3.79
91 92 2.347661 CCGCGTCGAATAAATCTGCTTC 60.348 50.000 4.92 0.00 0.00 3.86
92 93 1.593006 CCGCGTCGAATAAATCTGCTT 59.407 47.619 4.92 0.00 0.00 3.91
93 94 1.209128 CCGCGTCGAATAAATCTGCT 58.791 50.000 4.92 0.00 0.00 4.24
94 95 3.710233 CCGCGTCGAATAAATCTGC 57.290 52.632 4.92 0.00 0.00 4.26
966 967 0.035439 AACGCCGGGATTGATCAAGT 60.035 50.000 14.54 1.37 0.00 3.16
985 986 0.040942 CCCATTGACCAATGTGGGGA 59.959 55.000 18.15 0.00 44.97 4.81
1222 1661 0.548682 ATTGAGTGGAGGAGGCAGGT 60.549 55.000 0.00 0.00 0.00 4.00
1251 1692 0.179129 CATTTGTGCGCAGGGGAATC 60.179 55.000 12.22 0.00 0.00 2.52
1282 1725 3.056304 GAGAGATGCCGATTAGTGCTTC 58.944 50.000 0.00 0.00 33.27 3.86
1297 1740 2.005451 GCGTTGTTCTGCATGAGAGAT 58.995 47.619 0.00 0.00 30.18 2.75
1679 2135 1.135575 CCGAAATCTGCAAGCTTCACC 60.136 52.381 0.00 0.00 0.00 4.02
1691 2147 2.213499 CTGGCGCTAATTCCGAAATCT 58.787 47.619 7.64 0.00 0.00 2.40
1724 2180 2.198827 TGCCGTTCCTGTTGATCATT 57.801 45.000 0.00 0.00 0.00 2.57
1782 2241 7.030768 GCACAGTCCTAAAAACAACAACTTTA 58.969 34.615 0.00 0.00 0.00 1.85
1806 2265 5.234116 CCCATTCGGCAAAAGTATTAATTGC 59.766 40.000 0.00 0.00 46.60 3.56
1816 2275 2.230992 TCATCAACCCATTCGGCAAAAG 59.769 45.455 0.00 0.00 33.26 2.27
1824 2283 2.023673 TGCGGAATCATCAACCCATTC 58.976 47.619 0.00 0.00 0.00 2.67
1873 2337 5.502079 TCCTTAAGAACAAACAGAACACCA 58.498 37.500 3.36 0.00 0.00 4.17
1874 2338 6.438763 CATCCTTAAGAACAAACAGAACACC 58.561 40.000 3.36 0.00 0.00 4.16
2025 2492 2.954318 CAAATGTCTGCCCTGGGAATAG 59.046 50.000 19.27 11.20 0.00 1.73
2031 2498 2.571548 GACCAAATGTCTGCCCTGG 58.428 57.895 0.00 0.00 41.03 4.45
2053 2520 5.422331 AGCTAGTTCTAGTGCAGTTATTCCA 59.578 40.000 0.00 0.00 0.00 3.53
2236 2703 6.155827 TGAAAACTTCTTGTCCTTTGTGTTG 58.844 36.000 0.00 0.00 0.00 3.33
2307 2774 4.767928 AGATAGGAACGAGTAAGCATAGGG 59.232 45.833 0.00 0.00 0.00 3.53
2522 2989 3.814005 ATGGAGAAGGCAAATGAATGC 57.186 42.857 0.00 0.00 45.67 3.56
2540 3007 5.342791 TGCGCGCATATAAAAATGATCAATG 59.657 36.000 33.09 0.00 0.00 2.82
2690 3157 3.907221 AGATGCACTTAGCCATGGAAAT 58.093 40.909 18.40 2.45 44.83 2.17
2698 3165 3.248602 CGGTATTGAAGATGCACTTAGCC 59.751 47.826 0.00 0.00 44.83 3.93
2705 3172 1.378531 GGCACGGTATTGAAGATGCA 58.621 50.000 0.00 0.00 34.73 3.96
2732 3199 5.762218 GGGTACATAGACGTATAGTGTGTCT 59.238 44.000 12.49 0.00 44.63 3.41
2742 3209 3.491276 CCGCATTTGGGTACATAGACGTA 60.491 47.826 0.00 0.00 0.00 3.57
2774 3241 5.835280 GGACATTTGAGGTATGGATTTGGAT 59.165 40.000 0.00 0.00 0.00 3.41
2873 3342 4.036567 TGACGGACGACCATTGTATAAG 57.963 45.455 4.48 0.00 35.59 1.73
2885 3354 3.663995 TGGTTCTTATTTGACGGACGA 57.336 42.857 0.00 0.00 0.00 4.20
2887 3356 5.353123 TGCTAATGGTTCTTATTTGACGGAC 59.647 40.000 0.00 0.00 0.00 4.79
2906 3375 3.903783 GCGTGAGGCCATTGCTAA 58.096 55.556 5.01 0.00 37.74 3.09
2920 3389 0.322187 AGGCCAAAGTTATTCGGCGT 60.322 50.000 5.01 0.00 45.85 5.68
2925 3394 4.759516 TTGACGAAGGCCAAAGTTATTC 57.240 40.909 5.01 0.00 0.00 1.75
2953 3423 2.425143 TGCTATTTGGCAGAAGGAGG 57.575 50.000 0.00 0.00 37.29 4.30
3021 3491 4.033776 CCCATCACGTGCCCCACT 62.034 66.667 11.67 0.00 31.34 4.00
3022 3492 3.860930 AACCCATCACGTGCCCCAC 62.861 63.158 11.67 0.00 0.00 4.61
3028 3498 3.564511 GACAATCAAAACCCATCACGTG 58.435 45.455 9.94 9.94 0.00 4.49
3054 3524 1.448497 GAGGTTTGTGGGACGTCCA 59.552 57.895 34.40 18.59 44.79 4.02
3062 3532 2.440599 CCTGGGGGAGGTTTGTGG 59.559 66.667 0.00 0.00 37.02 4.17
3121 3591 2.426024 ACATAGTGTCGCATAAGTCCGT 59.574 45.455 0.00 0.00 0.00 4.69
3123 3593 3.555956 CCAACATAGTGTCGCATAAGTCC 59.444 47.826 0.00 0.00 0.00 3.85
3134 3605 6.267471 ACCATTTTTGTCATCCAACATAGTGT 59.733 34.615 0.00 0.00 31.20 3.55
3160 3631 3.023119 ACATCCAAACTGCAGTGTTCAA 58.977 40.909 22.49 5.89 0.00 2.69
3161 3632 2.653726 ACATCCAAACTGCAGTGTTCA 58.346 42.857 22.49 3.31 0.00 3.18
3171 3642 0.314935 CGCCTGCAAACATCCAAACT 59.685 50.000 0.00 0.00 0.00 2.66
3186 3657 1.518572 CGCGTACCTCAAATCGCCT 60.519 57.895 0.00 0.00 44.73 5.52
3189 3660 0.368907 CCAACGCGTACCTCAAATCG 59.631 55.000 14.46 0.00 0.00 3.34
3238 3710 5.825679 TGCCTAGAAAAGAGCACTACAAAAA 59.174 36.000 0.00 0.00 0.00 1.94
3283 3759 9.673454 CAAGTGTAAACTAAATTCCCAAAGTAC 57.327 33.333 0.00 0.00 0.00 2.73
3363 3839 7.565680 TCAAAGATAGACCAAGGATTAAGGAC 58.434 38.462 0.00 0.00 0.00 3.85
3386 3863 1.527034 AAGCGCAGAATCAAAGCTCA 58.473 45.000 11.47 0.00 37.15 4.26
3392 3869 5.182190 TGGTACATTTAAAGCGCAGAATCAA 59.818 36.000 11.47 0.00 0.00 2.57
3447 3924 7.015779 TCCAATATTCGTCCTGTTCCATATACA 59.984 37.037 0.00 0.00 0.00 2.29
3448 3925 7.383687 TCCAATATTCGTCCTGTTCCATATAC 58.616 38.462 0.00 0.00 0.00 1.47
3449 3926 7.453439 TCTCCAATATTCGTCCTGTTCCATATA 59.547 37.037 0.00 0.00 0.00 0.86
3455 3932 4.141914 ACCTCTCCAATATTCGTCCTGTTC 60.142 45.833 0.00 0.00 0.00 3.18
3598 4075 8.237949 TCTCTTCTGAGTACTAGAAATGAAACG 58.762 37.037 0.00 0.00 40.98 3.60
3617 4094 6.039270 CCTCTTCGTCACTATCATTCTCTTCT 59.961 42.308 0.00 0.00 0.00 2.85
3648 4125 5.759506 TCAAGTTCAAATAGGAAACGCAA 57.240 34.783 0.00 0.00 0.00 4.85
3693 4170 5.471556 TTTTGTGGATGCACATCTTGAAT 57.528 34.783 21.42 0.00 37.92 2.57
3706 4183 6.124340 TCATCACTAGCATGATTTTGTGGAT 58.876 36.000 0.00 0.00 37.20 3.41
3754 4235 4.676799 TCTGGATCGGAGGGAGTAATAT 57.323 45.455 0.00 0.00 0.00 1.28
3755 4236 4.464652 TTCTGGATCGGAGGGAGTAATA 57.535 45.455 0.00 0.00 0.00 0.98
3756 4237 3.330126 TTCTGGATCGGAGGGAGTAAT 57.670 47.619 0.00 0.00 0.00 1.89
3757 4238 2.840640 TTCTGGATCGGAGGGAGTAA 57.159 50.000 0.00 0.00 0.00 2.24
3758 4239 4.140994 ACTTATTCTGGATCGGAGGGAGTA 60.141 45.833 0.00 0.00 0.00 2.59
3768 4249 9.994432 CTAAAATCACAACACTTATTCTGGATC 57.006 33.333 0.00 0.00 0.00 3.36
3962 4443 7.012327 CCTGTTTCTCAACAAAGTGACTATCAA 59.988 37.037 0.00 0.00 42.53 2.57
3975 4456 4.952957 TGAATTTGTCCCTGTTTCTCAACA 59.047 37.500 0.00 0.00 40.82 3.33
3987 4468 8.257306 ACATATTTATGGTTGTGAATTTGTCCC 58.743 33.333 2.85 0.00 38.00 4.46
4042 4524 9.875691 ATATGTGCATTATATGAGTGATAACGT 57.124 29.630 0.00 0.00 0.00 3.99
4085 4567 0.312416 AATACAAGGCGCGTTTTGCA 59.688 45.000 13.51 11.09 46.97 4.08
4094 4576 4.320202 GCCACCATACATAAATACAAGGCG 60.320 45.833 0.00 0.00 0.00 5.52
4159 4641 9.522804 AAGACGCAATTTTGATGTAAACTTAAA 57.477 25.926 0.00 0.00 0.00 1.52
4212 4695 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4213 4696 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
4214 4697 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
4215 4698 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
4216 4699 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
4217 4700 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
4218 4701 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
4219 4702 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
4220 4703 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
4221 4704 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
4222 4705 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
4223 4706 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
4224 4707 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
4225 4708 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
4226 4709 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
4227 4710 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
4228 4711 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
4229 4712 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
4230 4713 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
4231 4714 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
4232 4715 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
4233 4716 6.068670 TCTAGATACATCCATTTCCGAGACA 58.931 40.000 0.00 0.00 0.00 3.41
4234 4717 6.576662 TCTAGATACATCCATTTCCGAGAC 57.423 41.667 0.00 0.00 0.00 3.36
4235 4718 6.778069 AGTTCTAGATACATCCATTTCCGAGA 59.222 38.462 0.00 0.00 0.00 4.04
4236 4719 6.987386 AGTTCTAGATACATCCATTTCCGAG 58.013 40.000 0.00 0.00 0.00 4.63
4237 4720 6.978674 AGTTCTAGATACATCCATTTCCGA 57.021 37.500 0.00 0.00 0.00 4.55
4238 4721 9.542462 TTTTAGTTCTAGATACATCCATTTCCG 57.458 33.333 0.00 0.00 0.00 4.30
4263 4746 9.664332 GCAGAAATGGATGTATCTAGATGTATT 57.336 33.333 15.79 4.32 0.00 1.89
4264 4747 7.978414 CGCAGAAATGGATGTATCTAGATGTAT 59.022 37.037 15.79 9.11 0.00 2.29
4265 4748 7.176690 TCGCAGAAATGGATGTATCTAGATGTA 59.823 37.037 15.79 4.44 0.00 2.29
4266 4749 6.015095 TCGCAGAAATGGATGTATCTAGATGT 60.015 38.462 15.79 1.25 0.00 3.06
4267 4750 6.309980 GTCGCAGAAATGGATGTATCTAGATG 59.690 42.308 15.79 0.00 39.69 2.90
4268 4751 6.015095 TGTCGCAGAAATGGATGTATCTAGAT 60.015 38.462 10.73 10.73 39.69 1.98
4269 4752 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
4270 4753 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
4271 4754 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
4272 4755 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
4273 4756 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
4274 4757 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
4275 4758 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
4276 4759 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
4277 4760 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
4278 4761 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
4279 4762 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
4280 4763 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
4281 4764 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
4282 4765 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
4283 4766 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
4284 4767 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
4285 4768 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
4286 4769 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
4287 4770 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
4288 4771 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
4289 4772 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
4290 4773 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
4291 4774 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
4292 4775 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
4293 4776 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
4294 4777 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4295 4778 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4296 4779 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4297 4780 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
4298 4781 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
4299 4782 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
4300 4783 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
4301 4784 1.978454 ATACTACTCCCTCCGTTCGG 58.022 55.000 4.74 4.74 0.00 4.30
4302 4785 5.505173 TTAAATACTACTCCCTCCGTTCG 57.495 43.478 0.00 0.00 0.00 3.95
4303 4786 6.267242 AGGATTAAATACTACTCCCTCCGTTC 59.733 42.308 0.00 0.00 0.00 3.95
4304 4787 6.141790 AGGATTAAATACTACTCCCTCCGTT 58.858 40.000 0.00 0.00 0.00 4.44
4305 4788 5.713807 AGGATTAAATACTACTCCCTCCGT 58.286 41.667 0.00 0.00 0.00 4.69
4306 4789 6.667558 AAGGATTAAATACTACTCCCTCCG 57.332 41.667 0.00 0.00 0.00 4.63
4310 4793 9.910267 TGGTAAAAAGGATTAAATACTACTCCC 57.090 33.333 0.00 0.00 0.00 4.30
4357 4841 1.231963 GGGATGGAGGGGGTACAATT 58.768 55.000 0.00 0.00 0.00 2.32
4364 4848 5.296966 TCTTATATTATGGGATGGAGGGGG 58.703 45.833 0.00 0.00 0.00 5.40
4365 4849 5.163152 GCTCTTATATTATGGGATGGAGGGG 60.163 48.000 0.00 0.00 0.00 4.79
4366 4850 5.429762 TGCTCTTATATTATGGGATGGAGGG 59.570 44.000 0.00 0.00 0.00 4.30
4367 4851 6.566079 TGCTCTTATATTATGGGATGGAGG 57.434 41.667 0.00 0.00 0.00 4.30
4368 4852 9.471702 AAAATGCTCTTATATTATGGGATGGAG 57.528 33.333 0.00 0.00 0.00 3.86
4369 4853 9.827198 AAAAATGCTCTTATATTATGGGATGGA 57.173 29.630 0.00 0.00 0.00 3.41
4370 4854 9.865321 CAAAAATGCTCTTATATTATGGGATGG 57.135 33.333 0.00 0.00 0.00 3.51
4373 4857 9.639563 TGTCAAAAATGCTCTTATATTATGGGA 57.360 29.630 0.00 0.00 0.00 4.37
4374 4858 9.683069 GTGTCAAAAATGCTCTTATATTATGGG 57.317 33.333 0.00 0.00 0.00 4.00
4380 4864 9.672673 ACACTAGTGTCAAAAATGCTCTTATAT 57.327 29.630 22.95 0.00 40.24 0.86
4382 4866 7.986085 ACACTAGTGTCAAAAATGCTCTTAT 57.014 32.000 22.95 0.00 40.24 1.73
4383 4867 8.148351 ACTACACTAGTGTCAAAAATGCTCTTA 58.852 33.333 31.11 8.36 43.74 2.10
4384 4868 6.992715 ACTACACTAGTGTCAAAAATGCTCTT 59.007 34.615 31.11 4.99 43.74 2.85
4385 4869 6.525629 ACTACACTAGTGTCAAAAATGCTCT 58.474 36.000 31.11 5.44 43.74 4.09
4386 4870 6.787085 ACTACACTAGTGTCAAAAATGCTC 57.213 37.500 31.11 0.00 43.74 4.26
4417 4901 9.267071 TCTCTCCATCCCATAATATAAAATCGA 57.733 33.333 0.00 0.00 0.00 3.59
4418 4902 9.539825 CTCTCTCCATCCCATAATATAAAATCG 57.460 37.037 0.00 0.00 0.00 3.34
4424 4908 8.928448 GCAATACTCTCTCCATCCCATAATATA 58.072 37.037 0.00 0.00 0.00 0.86
4425 4909 7.404104 TGCAATACTCTCTCCATCCCATAATAT 59.596 37.037 0.00 0.00 0.00 1.28
4426 4910 6.730507 TGCAATACTCTCTCCATCCCATAATA 59.269 38.462 0.00 0.00 0.00 0.98
4427 4911 5.549228 TGCAATACTCTCTCCATCCCATAAT 59.451 40.000 0.00 0.00 0.00 1.28
4428 4912 4.907269 TGCAATACTCTCTCCATCCCATAA 59.093 41.667 0.00 0.00 0.00 1.90
4429 4913 4.492646 TGCAATACTCTCTCCATCCCATA 58.507 43.478 0.00 0.00 0.00 2.74
4430 4914 3.321039 TGCAATACTCTCTCCATCCCAT 58.679 45.455 0.00 0.00 0.00 4.00
4431 4915 2.763039 TGCAATACTCTCTCCATCCCA 58.237 47.619 0.00 0.00 0.00 4.37
4432 4916 5.690464 ATATGCAATACTCTCTCCATCCC 57.310 43.478 0.00 0.00 0.00 3.85
4590 5078 6.780031 TGTATGCTAGATTTCCTAGAAGAGCT 59.220 38.462 0.00 0.00 46.17 4.09
4653 5141 5.393124 ACAAACGTATGCATTCAGATGTTG 58.607 37.500 3.54 3.77 41.30 3.33
4655 5143 5.627499 AACAAACGTATGCATTCAGATGT 57.373 34.783 3.54 2.83 35.36 3.06
4702 5217 9.366216 GAAAAACCTTATGTCAGAAAACAAACT 57.634 29.630 0.00 0.00 31.81 2.66
4738 5253 3.641436 GGGGTCCATTCTCAAGTTGTTTT 59.359 43.478 2.11 0.00 0.00 2.43
4772 5287 1.532523 TCAAATGACTCATGGCGCAA 58.467 45.000 10.83 0.00 0.00 4.85
4773 5288 1.199789 GTTCAAATGACTCATGGCGCA 59.800 47.619 10.83 0.00 0.00 6.09
4969 5491 9.800433 TGCATAAAATAACCACTTATCATTGTG 57.200 29.630 0.00 0.00 0.00 3.33
5069 5591 8.568676 TCATAAAAATCATACCGTTTCTTCCA 57.431 30.769 0.00 0.00 0.00 3.53
5103 5625 8.602472 ACTTAAAACCATCTAATTATGCCCAA 57.398 30.769 0.00 0.00 0.00 4.12
5204 5726 9.584839 GATTGCATAGATTTTGTTTTGTGAAAC 57.415 29.630 0.00 0.00 44.29 2.78
5310 5835 8.702163 AAAACTTGAAGGTGTTAGATTTGTTG 57.298 30.769 0.00 0.00 0.00 3.33
5328 5853 9.612620 GTACAGGATTGTGATTCTAAAAACTTG 57.387 33.333 0.00 0.00 38.23 3.16
5331 5856 8.784043 AGTGTACAGGATTGTGATTCTAAAAAC 58.216 33.333 0.00 0.00 38.23 2.43
5353 5878 4.402793 ACAACGAGATTATCTAGGCAGTGT 59.597 41.667 7.22 3.29 0.00 3.55
5371 5896 5.424757 TCCAGTCCCAAAATATAGACAACG 58.575 41.667 0.00 0.00 0.00 4.10
5373 5898 6.785076 TGTTCCAGTCCCAAAATATAGACAA 58.215 36.000 0.00 0.00 0.00 3.18
5376 5901 9.170890 AGATATGTTCCAGTCCCAAAATATAGA 57.829 33.333 0.00 0.00 0.00 1.98
5391 5916 9.448438 GCCATAAATATGTACAGATATGTTCCA 57.552 33.333 2.88 0.00 31.82 3.53
5442 5967 6.230472 TGTGAATATGGCATATGTAGGACAC 58.770 40.000 20.14 19.44 0.00 3.67
5538 6063 0.175989 GTAGTTCCTTCTCCCTGCGG 59.824 60.000 0.00 0.00 0.00 5.69
5540 6065 1.135333 CGAGTAGTTCCTTCTCCCTGC 59.865 57.143 0.00 0.00 0.00 4.85
5655 6180 6.663734 GGAAAGATCCTCAAAGAATAAGGGA 58.336 40.000 0.00 0.00 42.93 4.20
5816 6342 4.501229 CCTTTTGCATCTGCCAAACAACTA 60.501 41.667 0.00 0.00 41.18 2.24
5818 6344 2.545106 CCTTTTGCATCTGCCAAACAAC 59.455 45.455 0.00 0.00 41.18 3.32
5825 6351 3.893326 AATTACCCTTTTGCATCTGCC 57.107 42.857 0.00 0.00 41.18 4.85
5826 6352 5.323371 TGTAATTACCCTTTTGCATCTGC 57.677 39.130 13.01 0.00 42.50 4.26
5856 6382 1.074405 AGCCTCTGCCAGAAAACATGA 59.926 47.619 0.00 0.00 38.69 3.07
5876 6402 1.076777 GCATGGCCCTGCTCCTTTA 60.077 57.895 24.15 0.00 39.12 1.85
5887 6413 0.037419 ATTTTGTTGGACGCATGGCC 60.037 50.000 0.00 0.00 0.00 5.36
5937 6463 3.459598 TCCCTAGCTATGAAAAGCACCAT 59.540 43.478 0.00 0.00 45.30 3.55
5942 6468 5.029807 ACTCTTCCCTAGCTATGAAAAGC 57.970 43.478 0.00 0.00 43.11 3.51
6027 6553 6.627395 GCTAATGCTACTCTACTGAGAAGA 57.373 41.667 0.00 0.00 38.71 2.87
6059 6590 5.948992 AGAAGCACAACCTATTTCTGAAC 57.051 39.130 0.00 0.00 0.00 3.18
6063 6594 7.179338 TCTCTTCTAGAAGCACAACCTATTTCT 59.821 37.037 25.04 0.00 38.28 2.52
6071 6602 5.078411 TGGATCTCTTCTAGAAGCACAAC 57.922 43.478 25.04 15.64 37.89 3.32
6094 6625 8.296713 ACACCATTGATTTGTAAACTATCACAC 58.703 33.333 0.00 0.00 0.00 3.82
6149 6680 8.976471 GTACTAAATTACTAGGAAAATCCTCGC 58.024 37.037 1.36 0.00 45.66 5.03
6186 6729 9.391006 ACCCTTTCTTTTAAAAATTCAAAGGTC 57.609 29.630 23.12 0.00 37.69 3.85
6195 6738 7.450323 TCGAGATCCACCCTTTCTTTTAAAAAT 59.550 33.333 1.66 0.00 0.00 1.82
6201 6744 4.576330 ATCGAGATCCACCCTTTCTTTT 57.424 40.909 0.00 0.00 0.00 2.27
6240 6784 5.163561 TGTGAGACCTGTCCAATTTTGTTTC 60.164 40.000 0.00 0.00 0.00 2.78
6249 6793 2.046292 TCATGTGTGAGACCTGTCCAA 58.954 47.619 0.00 0.00 0.00 3.53
6255 6799 4.528206 TGTCAAGTATCATGTGTGAGACCT 59.472 41.667 0.00 0.00 45.45 3.85
6256 6800 4.820897 TGTCAAGTATCATGTGTGAGACC 58.179 43.478 0.00 0.00 45.45 3.85
6257 6801 6.035435 GTGATGTCAAGTATCATGTGTGAGAC 59.965 42.308 0.00 0.00 44.84 3.36
6268 6812 6.560253 ACAGGTTTTGTGATGTCAAGTATC 57.440 37.500 0.00 0.00 38.99 2.24
6307 6851 4.757149 GGCCTCTTTGCTATATTACACCTG 59.243 45.833 0.00 0.00 0.00 4.00
6308 6852 4.412199 TGGCCTCTTTGCTATATTACACCT 59.588 41.667 3.32 0.00 0.00 4.00
6310 6854 5.412904 GGATGGCCTCTTTGCTATATTACAC 59.587 44.000 3.32 0.00 32.04 2.90
6363 6911 0.253044 GCCCTATGTTCAGCTCACCA 59.747 55.000 0.00 0.00 0.00 4.17
6381 6929 2.202295 TCTTTCCTTTTGTTGTGCGC 57.798 45.000 0.00 0.00 0.00 6.09
6389 6937 7.762382 ACTAGTTTGTGTCTTCTTTCCTTTTG 58.238 34.615 0.00 0.00 0.00 2.44
6405 6953 1.494824 GCGTTGGACGACTAGTTTGT 58.505 50.000 4.46 0.00 46.05 2.83
6424 6972 4.833478 TCCAAAATTGAGGAGAGAGAGG 57.167 45.455 0.00 0.00 0.00 3.69
6430 6978 4.539726 CCATGGATCCAAAATTGAGGAGA 58.460 43.478 20.67 0.00 37.34 3.71
6438 6986 3.246094 ACTGAACCCCATGGATCCAAAAT 60.246 43.478 20.67 0.00 32.60 1.82
6459 7008 3.135994 ACACCGGTCATAACACAAGAAC 58.864 45.455 2.59 0.00 0.00 3.01
6465 7014 7.307573 GGCTATAAATTACACCGGTCATAACAC 60.308 40.741 2.59 0.00 0.00 3.32
6510 7059 2.885266 GGCTAAGCCCCTAACTAAATGC 59.115 50.000 0.00 0.00 44.06 3.56
6574 7123 7.615757 CCAAATTTCCAAAGAGGGTCTTATAGT 59.384 37.037 0.00 0.00 35.27 2.12
6577 7126 6.561294 TCCAAATTTCCAAAGAGGGTCTTAT 58.439 36.000 0.00 0.00 35.27 1.73
6632 9167 3.393970 CCGGCTCCTCTGGAAGCA 61.394 66.667 0.00 0.00 44.37 3.91
6672 9226 1.604438 CGTCGTCTCACATGGTGGAAA 60.604 52.381 0.00 0.00 33.87 3.13
6680 9234 2.125912 GCTGGCGTCGTCTCACAT 60.126 61.111 0.00 0.00 0.00 3.21
6681 9235 2.931068 ATGCTGGCGTCGTCTCACA 61.931 57.895 0.00 0.00 0.00 3.58
6682 9236 2.125912 ATGCTGGCGTCGTCTCAC 60.126 61.111 0.00 0.00 0.00 3.51
6683 9237 2.125952 CATGCTGGCGTCGTCTCA 60.126 61.111 0.00 0.00 0.00 3.27
6727 9281 1.079621 TAGGGGAAAGACGGAGGCA 59.920 57.895 0.00 0.00 0.00 4.75
6734 9288 1.405661 CGGAGCTTGTAGGGGAAAGAC 60.406 57.143 0.00 0.00 0.00 3.01
6737 9291 0.611714 GACGGAGCTTGTAGGGGAAA 59.388 55.000 0.00 0.00 0.00 3.13
6755 9309 0.259938 GGGTTCTACCGGGTCTAGGA 59.740 60.000 6.32 0.00 39.83 2.94
6787 9341 2.101582 ACCGAGCTAGCTGATACCAAAG 59.898 50.000 24.99 1.46 0.00 2.77
6788 9342 2.108168 ACCGAGCTAGCTGATACCAAA 58.892 47.619 24.99 0.00 0.00 3.28
6789 9343 1.776662 ACCGAGCTAGCTGATACCAA 58.223 50.000 24.99 0.00 0.00 3.67
6790 9344 1.681793 GAACCGAGCTAGCTGATACCA 59.318 52.381 24.99 0.00 0.00 3.25
6791 9345 1.000052 GGAACCGAGCTAGCTGATACC 60.000 57.143 24.99 14.52 0.00 2.73
6792 9346 1.335142 CGGAACCGAGCTAGCTGATAC 60.335 57.143 24.99 6.52 42.83 2.24
6793 9347 0.952280 CGGAACCGAGCTAGCTGATA 59.048 55.000 24.99 0.00 42.83 2.15
6794 9348 0.752009 TCGGAACCGAGCTAGCTGAT 60.752 55.000 24.99 2.76 44.01 2.90
6795 9349 1.378119 TCGGAACCGAGCTAGCTGA 60.378 57.895 24.99 8.39 44.01 4.26
6796 9350 3.197614 TCGGAACCGAGCTAGCTG 58.802 61.111 24.99 11.60 44.01 4.24
6804 9358 5.880547 GGCGAAGACATAATCGGAACCGA 62.881 52.174 18.06 18.06 45.54 4.69
6805 9359 1.521423 GCGAAGACATAATCGGAACCG 59.479 52.381 6.94 6.94 39.38 4.44
6806 9360 1.865340 GGCGAAGACATAATCGGAACC 59.135 52.381 0.00 0.00 39.38 3.62
6807 9361 1.521423 CGGCGAAGACATAATCGGAAC 59.479 52.381 0.00 0.00 39.38 3.62
6808 9362 1.847818 CGGCGAAGACATAATCGGAA 58.152 50.000 0.00 0.00 39.38 4.30
6809 9363 0.596600 GCGGCGAAGACATAATCGGA 60.597 55.000 12.98 0.00 39.38 4.55
6810 9364 1.557443 GGCGGCGAAGACATAATCGG 61.557 60.000 12.98 0.00 39.38 4.18
6811 9365 1.853319 GGCGGCGAAGACATAATCG 59.147 57.895 12.98 0.00 41.81 3.34
6812 9366 1.853319 CGGCGGCGAAGACATAATC 59.147 57.895 29.19 0.00 27.25 1.75
6813 9367 2.244651 GCGGCGGCGAAGACATAAT 61.245 57.895 36.87 0.00 27.25 1.28
6814 9368 2.888534 GCGGCGGCGAAGACATAA 60.889 61.111 36.87 0.00 27.25 1.90
6815 9369 4.884257 GGCGGCGGCGAAGACATA 62.884 66.667 36.87 0.00 41.24 2.29
6830 9384 4.048470 GAGAGGGTTGGGGTGGGC 62.048 72.222 0.00 0.00 0.00 5.36
6831 9385 3.717294 CGAGAGGGTTGGGGTGGG 61.717 72.222 0.00 0.00 0.00 4.61
6832 9386 4.410400 GCGAGAGGGTTGGGGTGG 62.410 72.222 0.00 0.00 0.00 4.61
6833 9387 3.322466 AGCGAGAGGGTTGGGGTG 61.322 66.667 0.00 0.00 0.00 4.61
6834 9388 3.322466 CAGCGAGAGGGTTGGGGT 61.322 66.667 0.00 0.00 0.00 4.95
6835 9389 3.316573 GACAGCGAGAGGGTTGGGG 62.317 68.421 0.00 0.00 0.00 4.96
6836 9390 2.266055 GACAGCGAGAGGGTTGGG 59.734 66.667 0.00 0.00 0.00 4.12
6837 9391 2.266055 GGACAGCGAGAGGGTTGG 59.734 66.667 0.00 0.00 0.00 3.77
6838 9392 1.374758 GTGGACAGCGAGAGGGTTG 60.375 63.158 0.00 0.00 0.00 3.77
6839 9393 2.584391 GGTGGACAGCGAGAGGGTT 61.584 63.158 0.00 0.00 0.00 4.11
6840 9394 2.997897 GGTGGACAGCGAGAGGGT 60.998 66.667 0.00 0.00 0.00 4.34
6867 9421 2.048503 CGAGGTGGACAACGGGTC 60.049 66.667 1.24 1.24 46.20 4.46
6868 9422 3.622826 CCGAGGTGGACAACGGGT 61.623 66.667 0.00 0.00 42.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.