Multiple sequence alignment - TraesCS6B01G174900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G174900 chr6B 100.000 5010 0 0 1 5010 189300532 189295523 0.000000e+00 9252.0
1 TraesCS6B01G174900 chr6B 98.347 121 1 1 2331 2451 164882915 164883034 1.410000e-50 211.0
2 TraesCS6B01G174900 chr6D 93.138 2390 93 35 1 2335 104153464 104151091 0.000000e+00 3439.0
3 TraesCS6B01G174900 chr6D 95.103 878 38 4 3464 4338 104150231 104149356 0.000000e+00 1378.0
4 TraesCS6B01G174900 chr6D 94.810 790 39 2 2550 3337 104151022 104150233 0.000000e+00 1230.0
5 TraesCS6B01G174900 chr6D 88.448 277 20 6 4385 4651 104149358 104149084 1.740000e-84 324.0
6 TraesCS6B01G174900 chr6D 91.398 93 5 1 2448 2540 104151094 104151005 1.890000e-24 124.0
7 TraesCS6B01G174900 chr6A 91.174 2164 112 34 1 2102 125549277 125547131 0.000000e+00 2865.0
8 TraesCS6B01G174900 chr6A 93.766 770 43 5 3872 4639 125545095 125544329 0.000000e+00 1151.0
9 TraesCS6B01G174900 chr6A 93.663 505 30 2 2550 3052 125546233 125545729 0.000000e+00 754.0
10 TraesCS6B01G174900 chr6A 95.584 317 14 0 3464 3780 125545411 125545095 4.470000e-140 508.0
11 TraesCS6B01G174900 chr6A 95.779 308 9 4 3032 3337 125545718 125545413 1.250000e-135 494.0
12 TraesCS6B01G174900 chr6A 94.262 244 12 2 2094 2335 125546723 125546480 6.130000e-99 372.0
13 TraesCS6B01G174900 chr6A 97.619 168 4 0 4630 4797 125544018 125543851 6.350000e-74 289.0
14 TraesCS6B01G174900 chr7B 99.167 120 0 1 2332 2451 535690745 535690863 1.090000e-51 215.0
15 TraesCS6B01G174900 chr7B 92.029 138 10 1 2331 2468 692308702 692308838 5.120000e-45 193.0
16 TraesCS6B01G174900 chr3B 97.581 124 1 2 2328 2451 655032741 655032862 1.410000e-50 211.0
17 TraesCS6B01G174900 chr3B 97.561 123 1 2 2329 2451 31105782 31105662 5.080000e-50 209.0
18 TraesCS6B01G174900 chr3B 91.971 137 11 0 3334 3470 593869293 593869157 5.120000e-45 193.0
19 TraesCS6B01G174900 chr7A 97.541 122 1 2 2330 2451 733339123 733339004 1.830000e-49 207.0
20 TraesCS6B01G174900 chr7A 93.233 133 9 0 3335 3467 462339315 462339183 3.960000e-46 196.0
21 TraesCS6B01G174900 chr2B 97.541 122 2 1 2331 2452 653603136 653603256 1.830000e-49 207.0
22 TraesCS6B01G174900 chr2B 90.845 142 11 2 3333 3473 658452478 658452338 6.620000e-44 189.0
23 TraesCS6B01G174900 chr1D 98.319 119 1 1 2333 2451 415493194 415493077 1.830000e-49 207.0
24 TraesCS6B01G174900 chr1D 90.845 142 12 1 3330 3471 178459504 178459644 6.620000e-44 189.0
25 TraesCS6B01G174900 chr3A 94.074 135 8 0 3336 3470 52198854 52198988 6.570000e-49 206.0
26 TraesCS6B01G174900 chr1B 97.521 121 2 1 2332 2452 674876128 674876247 6.570000e-49 206.0
27 TraesCS6B01G174900 chr5B 94.574 129 7 0 3336 3464 660144712 660144584 3.060000e-47 200.0
28 TraesCS6B01G174900 chr2D 93.893 131 8 0 3335 3465 619720675 619720545 1.100000e-46 198.0
29 TraesCS6B01G174900 chr2D 87.778 90 9 1 4804 4893 613227918 613227831 2.470000e-18 104.0
30 TraesCS6B01G174900 chr4A 93.846 130 8 0 3335 3464 695803905 695804034 3.960000e-46 196.0
31 TraesCS6B01G174900 chr3D 92.593 135 10 0 3338 3472 84562736 84562602 1.420000e-45 195.0
32 TraesCS6B01G174900 chr3D 85.556 90 7 4 4804 4893 606388892 606388975 6.910000e-14 89.8
33 TraesCS6B01G174900 chr2A 88.148 135 10 3 4793 4927 715806243 715806115 6.720000e-34 156.0
34 TraesCS6B01G174900 chr7D 91.089 101 6 1 4793 4893 181600195 181600098 3.150000e-27 134.0
35 TraesCS6B01G174900 chr5D 88.776 98 8 1 4795 4892 558733791 558733697 3.170000e-22 117.0
36 TraesCS6B01G174900 chr4B 85.393 89 10 2 4804 4892 507238355 507238440 6.910000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G174900 chr6B 189295523 189300532 5009 True 9252 9252 100.000000 1 5010 1 chr6B.!!$R1 5009
1 TraesCS6B01G174900 chr6D 104149084 104153464 4380 True 1299 3439 92.579400 1 4651 5 chr6D.!!$R1 4650
2 TraesCS6B01G174900 chr6A 125543851 125549277 5426 True 919 2865 94.549571 1 4797 7 chr6A.!!$R1 4796

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
690 763 0.251474 TGGAGCCTGATTGCAGCTTT 60.251 50.0 0.00 0.0 40.91 3.51 F
2313 2829 1.272781 CTTCGGCACTTGATCGTCTC 58.727 55.0 0.00 0.0 0.00 3.36 F
2352 2868 0.032813 TACTCCCTCCGTCCGGAATT 60.033 55.0 5.23 0.0 44.66 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2333 2849 0.032813 AATTCCGGACGGAGGGAGTA 60.033 55.0 13.64 0.00 46.06 2.59 R
3344 4075 0.108041 GGCAAGTATTTCCGGACGGA 60.108 55.0 1.83 9.76 43.52 4.69 R
4340 5124 0.252012 TGGCACTTACCATTTGGGGG 60.252 55.0 0.96 0.00 42.91 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 3.436243 CCTATATTCTTCGCCTCCTCCT 58.564 50.000 0.00 0.00 0.00 3.69
79 81 1.090052 CCTTCCGATCGAAGCCAACC 61.090 60.000 18.66 0.00 45.83 3.77
92 94 3.387947 CAACCTACCTCCGCCCGT 61.388 66.667 0.00 0.00 0.00 5.28
137 139 1.378124 CCGAGGACGACTCTTCTCCC 61.378 65.000 9.49 0.00 44.33 4.30
246 282 0.393132 TTTGCCGGCACCGATCAATA 60.393 50.000 32.95 8.41 42.83 1.90
262 298 4.127918 TCAATATCTCCGGTACCTCCAT 57.872 45.455 10.90 0.00 35.57 3.41
264 300 4.090090 CAATATCTCCGGTACCTCCATCT 58.910 47.826 10.90 0.00 35.57 2.90
272 308 2.545952 CGGTACCTCCATCTGATTTCGG 60.546 54.545 10.90 0.00 35.57 4.30
302 338 1.878069 TCCGTGCTTCGATGCGATG 60.878 57.895 17.33 11.71 42.86 3.84
324 360 4.832823 TGCCCAGATCGTCAATCTAATCTA 59.167 41.667 0.00 0.00 43.13 1.98
438 479 1.647084 GTTTTGACGGCGAGCAACT 59.353 52.632 16.62 0.00 0.00 3.16
612 677 7.070821 GGGATTTGTGGAACTAGAGAACCTATA 59.929 40.741 0.00 0.00 38.04 1.31
613 678 8.652290 GGATTTGTGGAACTAGAGAACCTATAT 58.348 37.037 0.00 0.00 38.04 0.86
616 681 8.603898 TTGTGGAACTAGAGAACCTATATTCA 57.396 34.615 0.00 0.00 38.04 2.57
649 722 8.772705 GCAGGATCTATAAATCTAATAGCATGC 58.227 37.037 10.51 10.51 0.00 4.06
690 763 0.251474 TGGAGCCTGATTGCAGCTTT 60.251 50.000 0.00 0.00 40.91 3.51
775 849 3.012502 TCCTCTTTACTGGCCCTAGAAGA 59.987 47.826 0.00 4.43 0.00 2.87
827 901 6.930164 TCTGCAAATGTGTATCAGCAATTTTT 59.070 30.769 0.00 0.00 0.00 1.94
828 902 7.116662 TCTGCAAATGTGTATCAGCAATTTTTC 59.883 33.333 0.00 0.00 0.00 2.29
898 976 9.927668 AATGTTCGTTTTTCCAGATTGATTATT 57.072 25.926 0.00 0.00 0.00 1.40
937 1015 7.786178 TGTATTATCTGCTTATGTTCACCAC 57.214 36.000 0.00 0.00 0.00 4.16
1117 1195 8.630037 CCTACAAACTCCTTAATTGAACTTGTT 58.370 33.333 0.00 0.00 0.00 2.83
1199 1277 8.727149 ACCTTGGATATCTTCTGGATTTATGAA 58.273 33.333 2.05 0.00 35.98 2.57
1312 1390 9.401058 CATGAATAGTTTCCCAGTAATTCTCTT 57.599 33.333 0.00 0.00 0.00 2.85
1412 1490 4.815846 GGTTACCGTGGAAGTACTTTTGAA 59.184 41.667 10.02 0.00 0.00 2.69
1485 1563 3.499338 TCTTTTCATGAGGTGCCATGTT 58.501 40.909 0.00 0.00 43.22 2.71
1565 1649 9.179552 TGATGTGACAAATTTGAATACTTTTCG 57.820 29.630 24.64 0.00 0.00 3.46
1671 1755 7.333528 TGGAGTTGCAATCCTTTTGATATAC 57.666 36.000 21.12 0.00 37.74 1.47
1715 1800 8.832521 CAAGTCAGTACCAATACAAACAAACTA 58.167 33.333 0.00 0.00 33.30 2.24
1738 1823 2.544686 GCTCAGTGATGATGCATGAGTC 59.455 50.000 2.46 0.00 39.63 3.36
1769 1854 3.933861 ACCCACTTCCATAGTTCCATC 57.066 47.619 0.00 0.00 33.85 3.51
1771 1856 2.170607 CCCACTTCCATAGTTCCATCGT 59.829 50.000 0.00 0.00 33.85 3.73
1789 1874 3.964909 TCGTTCATGTGAGATCGGTATG 58.035 45.455 0.00 0.00 32.97 2.39
1850 1935 1.350684 TGGCATTGCTTCTGTCTGGTA 59.649 47.619 8.82 0.00 0.00 3.25
1868 1953 8.607713 TGTCTGGTAAAGGAATGGTTAGAAATA 58.392 33.333 0.00 0.00 0.00 1.40
1869 1954 9.628500 GTCTGGTAAAGGAATGGTTAGAAATAT 57.372 33.333 0.00 0.00 0.00 1.28
1905 1990 3.967326 TCTTTGTTCTCCCTCTCAACTGA 59.033 43.478 0.00 0.00 0.00 3.41
1940 2025 8.336806 GTCAGCTTTTAATCTTGATCATCTGAG 58.663 37.037 0.00 0.00 0.00 3.35
2042 2130 8.033038 AGTGATTTCTCAGTTACTAAATACGCA 58.967 33.333 0.00 0.00 30.58 5.24
2070 2158 2.083774 TCGGCATGTTTCCATTCACTC 58.916 47.619 0.00 0.00 0.00 3.51
2072 2160 2.489329 CGGCATGTTTCCATTCACTCTT 59.511 45.455 0.00 0.00 0.00 2.85
2073 2161 3.057315 CGGCATGTTTCCATTCACTCTTT 60.057 43.478 0.00 0.00 0.00 2.52
2074 2162 4.488879 GGCATGTTTCCATTCACTCTTTC 58.511 43.478 0.00 0.00 0.00 2.62
2102 2200 9.208022 TCATTAATGTATTGAAGAATCTAGCGG 57.792 33.333 14.97 0.00 0.00 5.52
2113 2628 7.603651 TGAAGAATCTAGCGGATTATTACTCC 58.396 38.462 12.67 4.76 43.32 3.85
2158 2673 8.103948 TCCATGAAGTTTTCTGAAAGATCTTC 57.896 34.615 22.57 22.57 46.36 2.87
2165 2680 7.740805 AGTTTTCTGAAAGATCTTCTGTACCT 58.259 34.615 8.78 0.00 46.36 3.08
2230 2745 6.114187 TCTCTCTTCACTAATTTCCTTGCA 57.886 37.500 0.00 0.00 0.00 4.08
2255 2770 6.801575 TCTTTAAGTTACTTTTGGCAGTTGG 58.198 36.000 1.94 0.00 0.00 3.77
2267 2782 8.761689 ACTTTTGGCAGTTGGAATGATTATTAT 58.238 29.630 0.00 0.00 0.00 1.28
2313 2829 1.272781 CTTCGGCACTTGATCGTCTC 58.727 55.000 0.00 0.00 0.00 3.36
2328 2844 1.604693 CGTCTCGGTAAGTTGGCAGTT 60.605 52.381 0.00 0.00 0.00 3.16
2331 2847 4.060205 GTCTCGGTAAGTTGGCAGTTTTA 58.940 43.478 0.00 0.00 0.00 1.52
2332 2848 4.151867 GTCTCGGTAAGTTGGCAGTTTTAG 59.848 45.833 0.00 0.00 0.00 1.85
2333 2849 4.062991 CTCGGTAAGTTGGCAGTTTTAGT 58.937 43.478 0.00 0.00 0.00 2.24
2334 2850 5.010922 TCTCGGTAAGTTGGCAGTTTTAGTA 59.989 40.000 0.00 0.00 0.00 1.82
2335 2851 4.990426 TCGGTAAGTTGGCAGTTTTAGTAC 59.010 41.667 0.00 0.00 0.00 2.73
2336 2852 4.992951 CGGTAAGTTGGCAGTTTTAGTACT 59.007 41.667 0.00 0.00 0.00 2.73
2337 2853 5.119743 CGGTAAGTTGGCAGTTTTAGTACTC 59.880 44.000 0.00 0.00 0.00 2.59
2338 2854 5.410746 GGTAAGTTGGCAGTTTTAGTACTCC 59.589 44.000 0.00 0.00 0.00 3.85
2339 2855 4.017177 AGTTGGCAGTTTTAGTACTCCC 57.983 45.455 0.00 0.00 0.00 4.30
2340 2856 3.651423 AGTTGGCAGTTTTAGTACTCCCT 59.349 43.478 0.00 0.00 26.78 4.20
2341 2857 3.975168 TGGCAGTTTTAGTACTCCCTC 57.025 47.619 0.00 0.00 26.78 4.30
2342 2858 2.570302 TGGCAGTTTTAGTACTCCCTCC 59.430 50.000 0.00 0.00 26.78 4.30
2343 2859 2.418334 GGCAGTTTTAGTACTCCCTCCG 60.418 54.545 0.00 0.00 0.00 4.63
2344 2860 2.233186 GCAGTTTTAGTACTCCCTCCGT 59.767 50.000 0.00 0.00 0.00 4.69
2345 2861 3.675502 GCAGTTTTAGTACTCCCTCCGTC 60.676 52.174 0.00 0.00 0.00 4.79
2346 2862 3.095332 AGTTTTAGTACTCCCTCCGTCC 58.905 50.000 0.00 0.00 0.00 4.79
2347 2863 1.755179 TTTAGTACTCCCTCCGTCCG 58.245 55.000 0.00 0.00 0.00 4.79
2348 2864 0.107017 TTAGTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
2349 2865 0.982852 TAGTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
2350 2866 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
2351 2867 0.754587 GTACTCCCTCCGTCCGGAAT 60.755 60.000 5.23 0.00 44.66 3.01
2352 2868 0.032813 TACTCCCTCCGTCCGGAATT 60.033 55.000 5.23 0.00 44.66 2.17
2353 2869 0.032813 ACTCCCTCCGTCCGGAATTA 60.033 55.000 5.23 0.00 44.66 1.40
2354 2870 0.388294 CTCCCTCCGTCCGGAATTAC 59.612 60.000 5.23 0.00 44.66 1.89
2355 2871 0.032813 TCCCTCCGTCCGGAATTACT 60.033 55.000 5.23 0.00 44.66 2.24
2356 2872 0.828677 CCCTCCGTCCGGAATTACTT 59.171 55.000 5.23 0.00 44.66 2.24
2357 2873 1.472728 CCCTCCGTCCGGAATTACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2358 2874 1.206371 CCTCCGTCCGGAATTACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2359 2875 2.537401 CTCCGTCCGGAATTACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2360 2876 1.894466 TCCGTCCGGAATTACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2361 2877 2.498481 TCCGTCCGGAATTACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
2362 2878 2.864343 CCGTCCGGAATTACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
2363 2879 3.517602 CGTCCGGAATTACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
2364 2880 3.930229 CGTCCGGAATTACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2365 2881 4.390603 CGTCCGGAATTACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2366 2882 5.106869 CGTCCGGAATTACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2367 2883 6.403200 CGTCCGGAATTACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2368 2884 6.747280 GTCCGGAATTACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2369 2885 6.035843 CCGGAATTACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
2370 2886 6.127758 CCGGAATTACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
2371 2887 7.416664 CCGGAATTACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
2372 2888 7.433131 CGGAATTACTTGTCATCAAAATGGATG 59.567 37.037 0.00 0.00 44.78 3.51
2385 2901 9.772973 CATCAAAATGGATGAAAATGGATGTAT 57.227 29.630 0.00 0.00 46.00 2.29
2386 2902 9.991906 ATCAAAATGGATGAAAATGGATGTATC 57.008 29.630 0.00 0.00 0.00 2.24
2387 2903 9.204337 TCAAAATGGATGAAAATGGATGTATCT 57.796 29.630 0.00 0.00 0.00 1.98
2392 2908 8.908786 TGGATGAAAATGGATGTATCTAGAAC 57.091 34.615 0.00 0.00 0.00 3.01
2393 2909 8.717717 TGGATGAAAATGGATGTATCTAGAACT 58.282 33.333 0.00 0.00 0.00 3.01
2426 2942 9.499479 ACATCTAGATACATCCATTTCAATGAC 57.501 33.333 4.54 0.00 38.70 3.06
2427 2943 9.498176 CATCTAGATACATCCATTTCAATGACA 57.502 33.333 4.54 0.00 38.70 3.58
2429 2945 9.551734 TCTAGATACATCCATTTCAATGACAAG 57.448 33.333 0.81 0.00 38.70 3.16
2430 2946 9.334947 CTAGATACATCCATTTCAATGACAAGT 57.665 33.333 0.81 0.00 38.70 3.16
2432 2948 9.857656 AGATACATCCATTTCAATGACAAGTAT 57.142 29.630 0.81 4.50 38.70 2.12
2436 2952 8.253113 ACATCCATTTCAATGACAAGTATTTCC 58.747 33.333 0.81 0.00 38.70 3.13
2437 2953 6.851609 TCCATTTCAATGACAAGTATTTCCG 58.148 36.000 0.81 0.00 38.70 4.30
2438 2954 6.035843 CCATTTCAATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 38.70 5.14
2439 2955 6.127758 CCATTTCAATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 38.70 5.14
2440 2956 7.416664 CCATTTCAATGACAAGTATTTCCGGAT 60.417 37.037 4.15 0.00 38.70 4.18
2441 2957 6.435430 TTCAATGACAAGTATTTCCGGATG 57.565 37.500 4.15 0.97 0.00 3.51
2442 2958 4.881273 TCAATGACAAGTATTTCCGGATGG 59.119 41.667 4.15 0.00 0.00 3.51
2443 2959 4.771114 ATGACAAGTATTTCCGGATGGA 57.229 40.909 4.15 0.00 44.61 3.41
2509 3025 6.316140 TCTGCGATTATTCTGTGCACTATTTT 59.684 34.615 19.41 1.89 0.00 1.82
2510 3026 6.851609 TGCGATTATTCTGTGCACTATTTTT 58.148 32.000 19.41 0.79 0.00 1.94
2511 3027 6.746822 TGCGATTATTCTGTGCACTATTTTTG 59.253 34.615 19.41 1.80 0.00 2.44
2512 3028 6.966632 GCGATTATTCTGTGCACTATTTTTGA 59.033 34.615 19.41 2.31 0.00 2.69
2513 3029 7.645340 GCGATTATTCTGTGCACTATTTTTGAT 59.355 33.333 19.41 2.87 0.00 2.57
2561 3259 5.461032 TTTTGCGGGACTCAAATTTATGT 57.539 34.783 0.00 0.00 42.80 2.29
2562 3260 5.461032 TTTGCGGGACTCAAATTTATGTT 57.539 34.783 0.00 0.00 38.17 2.71
2567 3265 7.607250 TGCGGGACTCAAATTTATGTTATTTT 58.393 30.769 0.00 0.00 0.00 1.82
2613 3311 5.921408 CGAGTACCCTATGCTATTTGAAGTC 59.079 44.000 0.00 0.00 0.00 3.01
2634 3332 2.016961 CAACACAGCAGCAGAACGT 58.983 52.632 0.00 0.00 0.00 3.99
2750 3448 7.148869 CGCTTATTTTTATGTGATGCCATCATG 60.149 37.037 11.14 0.00 42.04 3.07
2752 3450 9.537192 CTTATTTTTATGTGATGCCATCATGTT 57.463 29.630 11.14 1.77 42.04 2.71
2753 3451 7.780008 ATTTTTATGTGATGCCATCATGTTG 57.220 32.000 11.14 0.00 42.04 3.33
2800 3498 7.916128 CATCAGATGATGCAAAATCTTCTTC 57.084 36.000 9.73 2.01 44.44 2.87
2889 3587 5.724328 CAGCCTCATACAACTGACTTCTTA 58.276 41.667 0.00 0.00 31.67 2.10
2892 3590 6.382570 AGCCTCATACAACTGACTTCTTAGAT 59.617 38.462 0.00 0.00 0.00 1.98
2990 3688 1.939974 TGCTGTGACTGTTGTCTGTC 58.060 50.000 0.00 0.00 43.29 3.51
2991 3689 1.482182 TGCTGTGACTGTTGTCTGTCT 59.518 47.619 6.76 0.00 43.29 3.41
2998 3696 1.202417 ACTGTTGTCTGTCTCACCGTG 60.202 52.381 0.00 0.00 0.00 4.94
3002 3700 1.399714 TGTCTGTCTCACCGTGACTT 58.600 50.000 0.00 0.00 35.63 3.01
3015 3713 2.135933 CGTGACTTGAGTTTCCTGGTC 58.864 52.381 0.00 0.00 0.00 4.02
3024 3722 4.223953 TGAGTTTCCTGGTCTGAGTAGTT 58.776 43.478 0.00 0.00 0.00 2.24
3174 3905 8.806146 ACATTGATATAGTTGAAACAAAGCCTT 58.194 29.630 0.00 0.00 0.00 4.35
3236 3967 0.109723 TTGCCCCACCACTTGACTAC 59.890 55.000 0.00 0.00 0.00 2.73
3275 4006 0.117340 AACCTACTGCTCCTCCCAGT 59.883 55.000 0.00 0.00 44.99 4.00
3276 4007 0.117340 ACCTACTGCTCCTCCCAGTT 59.883 55.000 0.00 0.00 42.98 3.16
3306 4037 1.736681 CTGCAGGTAGCTTTCTTGCTC 59.263 52.381 19.98 1.46 45.94 4.26
3308 4039 2.006169 GCAGGTAGCTTTCTTGCTCTC 58.994 52.381 14.91 0.00 42.97 3.20
3309 4040 2.626840 CAGGTAGCTTTCTTGCTCTCC 58.373 52.381 0.00 0.00 42.97 3.71
3311 4042 2.843113 AGGTAGCTTTCTTGCTCTCCAT 59.157 45.455 0.00 0.00 42.97 3.41
3313 4044 3.625313 GGTAGCTTTCTTGCTCTCCATTC 59.375 47.826 0.00 0.00 42.97 2.67
3318 4049 4.697352 GCTTTCTTGCTCTCCATTCAACTA 59.303 41.667 0.00 0.00 0.00 2.24
3323 4054 7.004555 TCTTGCTCTCCATTCAACTAGTAAA 57.995 36.000 0.00 0.00 0.00 2.01
3337 4068 8.472007 TCAACTAGTAAATTTTGGTGGAATGT 57.528 30.769 0.00 0.00 0.00 2.71
3338 4069 9.575868 TCAACTAGTAAATTTTGGTGGAATGTA 57.424 29.630 0.00 0.00 0.00 2.29
3339 4070 9.620660 CAACTAGTAAATTTTGGTGGAATGTAC 57.379 33.333 0.00 0.00 30.60 2.90
3340 4071 9.582648 AACTAGTAAATTTTGGTGGAATGTACT 57.417 29.630 0.00 5.36 39.60 2.73
3343 4074 8.344446 AGTAAATTTTGGTGGAATGTACTACC 57.656 34.615 0.00 0.00 36.33 3.18
3344 4075 8.168058 AGTAAATTTTGGTGGAATGTACTACCT 58.832 33.333 0.00 0.00 41.09 3.08
3345 4076 7.462571 AAATTTTGGTGGAATGTACTACCTC 57.537 36.000 0.00 0.00 41.09 3.85
3346 4077 4.563140 TTTGGTGGAATGTACTACCTCC 57.437 45.455 13.55 13.55 41.09 4.30
3347 4078 2.104967 TGGTGGAATGTACTACCTCCG 58.895 52.381 14.65 0.00 41.09 4.63
3348 4079 2.105766 GGTGGAATGTACTACCTCCGT 58.894 52.381 0.00 0.00 38.19 4.69
3349 4080 2.100418 GGTGGAATGTACTACCTCCGTC 59.900 54.545 0.00 0.00 38.19 4.79
3350 4081 2.100418 GTGGAATGTACTACCTCCGTCC 59.900 54.545 0.00 0.00 0.00 4.79
3351 4082 1.336125 GGAATGTACTACCTCCGTCCG 59.664 57.143 0.00 0.00 0.00 4.79
3352 4083 1.336125 GAATGTACTACCTCCGTCCGG 59.664 57.143 0.00 0.00 0.00 5.14
3353 4084 0.548031 ATGTACTACCTCCGTCCGGA 59.452 55.000 0.00 0.00 42.90 5.14
3354 4085 0.327924 TGTACTACCTCCGTCCGGAA 59.672 55.000 5.23 0.00 44.66 4.30
3355 4086 1.271871 TGTACTACCTCCGTCCGGAAA 60.272 52.381 5.23 0.00 44.66 3.13
3356 4087 2.027385 GTACTACCTCCGTCCGGAAAT 58.973 52.381 5.23 3.48 44.66 2.17
3357 4088 2.442236 ACTACCTCCGTCCGGAAATA 57.558 50.000 5.23 4.45 44.66 1.40
3358 4089 2.027385 ACTACCTCCGTCCGGAAATAC 58.973 52.381 5.23 0.00 44.66 1.89
3359 4090 2.305009 CTACCTCCGTCCGGAAATACT 58.695 52.381 5.23 0.00 44.66 2.12
3360 4091 1.565067 ACCTCCGTCCGGAAATACTT 58.435 50.000 5.23 0.00 44.66 2.24
3361 4092 1.206371 ACCTCCGTCCGGAAATACTTG 59.794 52.381 5.23 0.00 44.66 3.16
3362 4093 1.287425 CTCCGTCCGGAAATACTTGC 58.713 55.000 5.23 0.00 44.66 4.01
3363 4094 0.108041 TCCGTCCGGAAATACTTGCC 60.108 55.000 5.23 0.00 42.05 4.52
3364 4095 0.391927 CCGTCCGGAAATACTTGCCA 60.392 55.000 5.23 0.00 37.50 4.92
3365 4096 1.663695 CGTCCGGAAATACTTGCCAT 58.336 50.000 5.23 0.00 0.00 4.40
3366 4097 1.597663 CGTCCGGAAATACTTGCCATC 59.402 52.381 5.23 0.00 0.00 3.51
3367 4098 2.639065 GTCCGGAAATACTTGCCATCA 58.361 47.619 5.23 0.00 0.00 3.07
3368 4099 3.013921 GTCCGGAAATACTTGCCATCAA 58.986 45.455 5.23 0.00 0.00 2.57
3369 4100 3.442273 GTCCGGAAATACTTGCCATCAAA 59.558 43.478 5.23 0.00 0.00 2.69
3370 4101 4.082463 GTCCGGAAATACTTGCCATCAAAA 60.082 41.667 5.23 0.00 0.00 2.44
3371 4102 4.709397 TCCGGAAATACTTGCCATCAAAAT 59.291 37.500 0.00 0.00 0.00 1.82
3372 4103 4.805192 CCGGAAATACTTGCCATCAAAATG 59.195 41.667 0.00 0.00 0.00 2.32
3419 4150 9.708092 GATGTATTTTAGTTCTAGATACACCCC 57.292 37.037 14.34 8.08 36.40 4.95
3420 4151 8.849543 TGTATTTTAGTTCTAGATACACCCCT 57.150 34.615 0.00 0.00 30.60 4.79
3421 4152 9.275572 TGTATTTTAGTTCTAGATACACCCCTT 57.724 33.333 0.00 0.00 30.60 3.95
3428 4159 7.803131 AGTTCTAGATACACCCCTTTTTATCC 58.197 38.462 0.00 0.00 0.00 2.59
3429 4160 7.404980 AGTTCTAGATACACCCCTTTTTATCCA 59.595 37.037 0.00 0.00 0.00 3.41
3430 4161 7.947782 TCTAGATACACCCCTTTTTATCCAT 57.052 36.000 0.00 0.00 0.00 3.41
3431 4162 8.344939 TCTAGATACACCCCTTTTTATCCATT 57.655 34.615 0.00 0.00 0.00 3.16
3432 4163 8.787818 TCTAGATACACCCCTTTTTATCCATTT 58.212 33.333 0.00 0.00 0.00 2.32
3433 4164 9.421399 CTAGATACACCCCTTTTTATCCATTTT 57.579 33.333 0.00 0.00 0.00 1.82
3434 4165 8.078060 AGATACACCCCTTTTTATCCATTTTG 57.922 34.615 0.00 0.00 0.00 2.44
3435 4166 7.898636 AGATACACCCCTTTTTATCCATTTTGA 59.101 33.333 0.00 0.00 0.00 2.69
3436 4167 6.755542 ACACCCCTTTTTATCCATTTTGAA 57.244 33.333 0.00 0.00 0.00 2.69
3437 4168 6.768483 ACACCCCTTTTTATCCATTTTGAAG 58.232 36.000 0.00 0.00 0.00 3.02
3438 4169 6.556874 ACACCCCTTTTTATCCATTTTGAAGA 59.443 34.615 0.00 0.00 0.00 2.87
3439 4170 6.873605 CACCCCTTTTTATCCATTTTGAAGAC 59.126 38.462 0.00 0.00 0.00 3.01
3440 4171 6.556874 ACCCCTTTTTATCCATTTTGAAGACA 59.443 34.615 0.00 0.00 0.00 3.41
3441 4172 6.873605 CCCCTTTTTATCCATTTTGAAGACAC 59.126 38.462 0.00 0.00 0.00 3.67
3442 4173 6.586082 CCCTTTTTATCCATTTTGAAGACACG 59.414 38.462 0.00 0.00 0.00 4.49
3443 4174 7.145323 CCTTTTTATCCATTTTGAAGACACGT 58.855 34.615 0.00 0.00 0.00 4.49
3444 4175 8.293867 CCTTTTTATCCATTTTGAAGACACGTA 58.706 33.333 0.00 0.00 0.00 3.57
3445 4176 9.840427 CTTTTTATCCATTTTGAAGACACGTAT 57.160 29.630 0.00 0.00 0.00 3.06
3449 4180 9.834628 TTATCCATTTTGAAGACACGTATTTTC 57.165 29.630 0.00 0.00 0.00 2.29
3450 4181 6.367421 TCCATTTTGAAGACACGTATTTTCG 58.633 36.000 0.00 0.00 0.00 3.46
3451 4182 5.567534 CCATTTTGAAGACACGTATTTTCGG 59.432 40.000 0.00 0.00 34.94 4.30
3452 4183 5.987777 TTTTGAAGACACGTATTTTCGGA 57.012 34.783 0.00 0.00 34.94 4.55
3453 4184 4.977741 TTGAAGACACGTATTTTCGGAC 57.022 40.909 0.00 0.00 34.94 4.79
3454 4185 2.981805 TGAAGACACGTATTTTCGGACG 59.018 45.455 0.00 0.00 44.57 4.79
3455 4186 1.986698 AGACACGTATTTTCGGACGG 58.013 50.000 0.00 0.00 43.32 4.79
3456 4187 1.541147 AGACACGTATTTTCGGACGGA 59.459 47.619 0.00 0.00 43.32 4.69
3457 4188 1.916000 GACACGTATTTTCGGACGGAG 59.084 52.381 0.00 0.00 43.32 4.63
3458 4189 1.274596 CACGTATTTTCGGACGGAGG 58.725 55.000 0.00 0.00 43.32 4.30
3459 4190 0.890683 ACGTATTTTCGGACGGAGGT 59.109 50.000 0.00 0.00 43.32 3.85
3460 4191 2.091541 ACGTATTTTCGGACGGAGGTA 58.908 47.619 0.00 0.00 43.32 3.08
3461 4192 2.098117 ACGTATTTTCGGACGGAGGTAG 59.902 50.000 0.00 0.00 43.32 3.18
3462 4193 2.098117 CGTATTTTCGGACGGAGGTAGT 59.902 50.000 0.00 0.00 35.43 2.73
3469 4200 3.559069 TCGGACGGAGGTAGTATCAATT 58.441 45.455 0.00 0.00 0.00 2.32
3473 4204 6.266103 TCGGACGGAGGTAGTATCAATTTATT 59.734 38.462 0.00 0.00 0.00 1.40
3676 4407 1.302285 CCCTCAGCAGCTTCCACAT 59.698 57.895 0.00 0.00 0.00 3.21
3683 4414 1.085091 GCAGCTTCCACATCACAGAG 58.915 55.000 0.00 0.00 0.00 3.35
3689 4420 1.004560 CCACATCACAGAGCACGGT 60.005 57.895 0.00 0.00 0.00 4.83
3780 4511 7.401484 AAAGGTTTGTATTTTGTAACATGCG 57.599 32.000 0.00 0.00 0.00 4.73
3794 4525 1.002257 ATGCGTCTTGTGATGGCCA 60.002 52.632 8.56 8.56 0.00 5.36
3795 4526 0.394762 ATGCGTCTTGTGATGGCCAT 60.395 50.000 20.96 20.96 0.00 4.40
3796 4527 0.608856 TGCGTCTTGTGATGGCCATT 60.609 50.000 21.84 3.11 0.00 3.16
3803 4536 4.022068 GTCTTGTGATGGCCATTTTGAGAA 60.022 41.667 21.84 8.34 0.00 2.87
3807 4540 2.749076 TGATGGCCATTTTGAGAACTCG 59.251 45.455 21.84 0.00 0.00 4.18
3817 4550 6.591834 CCATTTTGAGAACTCGATGAGTAACT 59.408 38.462 0.00 3.49 42.59 2.24
3889 4623 2.073816 TCCAGCTTTAAACGCTAGTGC 58.926 47.619 2.40 0.00 35.63 4.40
3900 4634 2.618053 ACGCTAGTGCCATCTTAACAC 58.382 47.619 2.40 0.00 35.36 3.32
3901 4635 2.233922 ACGCTAGTGCCATCTTAACACT 59.766 45.455 2.40 0.00 46.05 3.55
3911 4645 4.321156 GCCATCTTAACACTTTGTGCATCA 60.321 41.667 0.00 0.00 36.98 3.07
3946 4680 2.741228 CGAGAAGGATGCAAAGGAGGAG 60.741 54.545 0.00 0.00 0.00 3.69
3947 4681 1.563410 AGAAGGATGCAAAGGAGGAGG 59.437 52.381 0.00 0.00 0.00 4.30
3967 4701 1.798813 GCGAAGAAAGAAGAGCCGAAA 59.201 47.619 0.00 0.00 0.00 3.46
3976 4710 2.489722 AGAAGAGCCGAAATTTTCAGCC 59.510 45.455 12.58 5.93 33.58 4.85
4109 4843 0.984961 TCCTGATCCCTTGGGAGCTG 60.985 60.000 22.46 20.95 0.00 4.24
4121 4856 1.454663 GGAGCTGGGGCATCTTTCC 60.455 63.158 0.00 0.00 41.70 3.13
4236 4971 2.682856 TGGTCATGGATTTTTAGCGAGC 59.317 45.455 0.00 0.00 0.00 5.03
4241 4976 5.050490 TCATGGATTTTTAGCGAGCTACTC 58.950 41.667 4.05 0.49 0.00 2.59
4301 5036 4.798907 AGCACGTTTCTAGTTGATCATACG 59.201 41.667 0.00 1.47 0.00 3.06
4303 5038 5.275788 GCACGTTTCTAGTTGATCATACGTC 60.276 44.000 0.00 0.00 38.73 4.34
4343 5127 8.577048 AATAGCTCTTAACTTTCTTTTACCCC 57.423 34.615 0.00 0.00 0.00 4.95
4344 5128 5.322754 AGCTCTTAACTTTCTTTTACCCCC 58.677 41.667 0.00 0.00 0.00 5.40
4345 5129 5.074804 GCTCTTAACTTTCTTTTACCCCCA 58.925 41.667 0.00 0.00 0.00 4.96
4346 5130 5.537295 GCTCTTAACTTTCTTTTACCCCCAA 59.463 40.000 0.00 0.00 0.00 4.12
4347 5131 6.041182 GCTCTTAACTTTCTTTTACCCCCAAA 59.959 38.462 0.00 0.00 0.00 3.28
4348 5132 7.256190 GCTCTTAACTTTCTTTTACCCCCAAAT 60.256 37.037 0.00 0.00 0.00 2.32
4349 5133 7.958088 TCTTAACTTTCTTTTACCCCCAAATG 58.042 34.615 0.00 0.00 0.00 2.32
4350 5134 5.560722 AACTTTCTTTTACCCCCAAATGG 57.439 39.130 0.00 0.00 0.00 3.16
4351 5135 4.562767 ACTTTCTTTTACCCCCAAATGGT 58.437 39.130 0.00 0.00 39.97 3.55
4352 5136 5.718039 ACTTTCTTTTACCCCCAAATGGTA 58.282 37.500 0.00 0.00 37.31 3.25
4353 5137 6.144625 ACTTTCTTTTACCCCCAAATGGTAA 58.855 36.000 0.00 0.00 44.52 2.85
4354 5138 6.269077 ACTTTCTTTTACCCCCAAATGGTAAG 59.731 38.462 0.00 0.00 46.16 2.34
4355 5139 5.342361 TCTTTTACCCCCAAATGGTAAGT 57.658 39.130 0.00 0.00 46.16 2.24
4356 5140 5.081032 TCTTTTACCCCCAAATGGTAAGTG 58.919 41.667 0.00 1.23 46.16 3.16
4357 5141 2.517998 TACCCCCAAATGGTAAGTGC 57.482 50.000 0.00 0.00 35.44 4.40
4358 5142 0.252057 ACCCCCAAATGGTAAGTGCC 60.252 55.000 0.00 0.00 33.26 5.01
4359 5143 0.252012 CCCCCAAATGGTAAGTGCCA 60.252 55.000 0.00 0.00 43.48 4.92
4360 5144 0.894835 CCCCAAATGGTAAGTGCCAC 59.105 55.000 0.00 0.00 41.94 5.01
4361 5145 1.626686 CCCAAATGGTAAGTGCCACA 58.373 50.000 0.00 0.00 41.94 4.17
4362 5146 1.272212 CCCAAATGGTAAGTGCCACAC 59.728 52.381 0.00 0.00 41.94 3.82
4364 5148 3.417101 CCAAATGGTAAGTGCCACACTA 58.583 45.455 0.00 0.00 44.62 2.74
4365 5149 3.823873 CCAAATGGTAAGTGCCACACTAA 59.176 43.478 0.00 0.00 44.62 2.24
4366 5150 4.462483 CCAAATGGTAAGTGCCACACTAAT 59.538 41.667 0.00 0.00 44.62 1.73
4367 5151 5.401550 CAAATGGTAAGTGCCACACTAATG 58.598 41.667 0.00 0.00 44.62 1.90
4368 5152 3.066291 TGGTAAGTGCCACACTAATGG 57.934 47.619 0.00 0.00 44.62 3.16
4380 5164 5.437060 CCACACTAATGGCACTTATTAGGT 58.563 41.667 9.65 3.43 40.66 3.08
4381 5165 5.527582 CCACACTAATGGCACTTATTAGGTC 59.472 44.000 9.65 0.00 40.66 3.85
4382 5166 6.112734 CACACTAATGGCACTTATTAGGTCA 58.887 40.000 9.65 0.00 40.66 4.02
4383 5167 6.767902 CACACTAATGGCACTTATTAGGTCAT 59.232 38.462 9.65 0.00 40.66 3.06
4384 5168 7.283127 CACACTAATGGCACTTATTAGGTCATT 59.717 37.037 9.65 0.00 40.66 2.57
4385 5169 7.834181 ACACTAATGGCACTTATTAGGTCATTT 59.166 33.333 9.65 0.00 40.66 2.32
4386 5170 8.686334 CACTAATGGCACTTATTAGGTCATTTT 58.314 33.333 9.65 0.00 40.66 1.82
4391 5175 8.871629 TGGCACTTATTAGGTCATTTTAAAGA 57.128 30.769 0.00 0.00 0.00 2.52
4445 5229 9.817809 ATATGTATTCGAGTGACAGTTACAATT 57.182 29.630 0.00 0.00 0.00 2.32
4515 5310 1.183549 ACCTGGCTAGACGTTACTGG 58.816 55.000 0.00 0.00 0.00 4.00
4574 5369 2.497273 ACCACAAAGCTTATCCAATGGC 59.503 45.455 0.00 0.00 0.00 4.40
4589 5384 1.959042 ATGGCGCTTCTTCTACATGG 58.041 50.000 7.64 0.00 0.00 3.66
4593 5388 1.661112 GCGCTTCTTCTACATGGTGTC 59.339 52.381 0.00 0.00 0.00 3.67
4612 5407 1.503542 GGAGCAAAGGCACACGATG 59.496 57.895 0.00 0.00 44.61 3.84
4619 5414 0.889186 AAGGCACACGATGGGTTGAC 60.889 55.000 0.00 0.00 0.00 3.18
4708 5823 7.008021 ACACCATCCTTGCTTGAATTATTTT 57.992 32.000 0.00 0.00 0.00 1.82
4709 5824 7.452562 ACACCATCCTTGCTTGAATTATTTTT 58.547 30.769 0.00 0.00 0.00 1.94
4783 5898 2.351726 GTGCTCTGTTTTCGTTCACACT 59.648 45.455 0.00 0.00 0.00 3.55
4797 5912 4.268644 CGTTCACACTGATGGCATACTAAG 59.731 45.833 0.00 0.00 0.00 2.18
4798 5913 4.406648 TCACACTGATGGCATACTAAGG 57.593 45.455 0.00 0.00 0.00 2.69
4799 5914 3.134623 TCACACTGATGGCATACTAAGGG 59.865 47.826 0.00 0.00 0.00 3.95
4800 5915 3.134623 CACACTGATGGCATACTAAGGGA 59.865 47.826 0.00 0.00 0.00 4.20
4801 5916 3.389329 ACACTGATGGCATACTAAGGGAG 59.611 47.826 0.00 0.00 0.00 4.30
4802 5917 2.370189 ACTGATGGCATACTAAGGGAGC 59.630 50.000 0.00 0.00 0.00 4.70
4803 5918 1.344438 TGATGGCATACTAAGGGAGCG 59.656 52.381 0.00 0.00 0.00 5.03
4804 5919 1.344763 GATGGCATACTAAGGGAGCGT 59.655 52.381 0.00 0.00 0.00 5.07
4805 5920 1.200519 TGGCATACTAAGGGAGCGTT 58.799 50.000 0.00 0.00 0.00 4.84
4806 5921 1.138266 TGGCATACTAAGGGAGCGTTC 59.862 52.381 0.00 0.00 0.00 3.95
4807 5922 1.488527 GCATACTAAGGGAGCGTTCG 58.511 55.000 0.00 0.00 0.00 3.95
4808 5923 1.868519 GCATACTAAGGGAGCGTTCGG 60.869 57.143 0.00 0.00 0.00 4.30
4809 5924 0.388294 ATACTAAGGGAGCGTTCGGC 59.612 55.000 0.00 0.00 44.05 5.54
4820 5935 4.162690 GTTCGGCATCCCTCCGCT 62.163 66.667 0.00 0.00 46.05 5.52
4821 5936 3.849951 TTCGGCATCCCTCCGCTC 61.850 66.667 0.00 0.00 46.05 5.03
4822 5937 4.841617 TCGGCATCCCTCCGCTCT 62.842 66.667 0.00 0.00 46.05 4.09
4823 5938 4.598894 CGGCATCCCTCCGCTCTG 62.599 72.222 0.00 0.00 40.46 3.35
4824 5939 4.925861 GGCATCCCTCCGCTCTGC 62.926 72.222 0.00 0.00 0.00 4.26
4825 5940 4.166888 GCATCCCTCCGCTCTGCA 62.167 66.667 0.00 0.00 33.13 4.41
4826 5941 2.586245 CATCCCTCCGCTCTGCAA 59.414 61.111 0.00 0.00 0.00 4.08
4827 5942 1.817099 CATCCCTCCGCTCTGCAAC 60.817 63.158 0.00 0.00 0.00 4.17
4828 5943 1.992277 ATCCCTCCGCTCTGCAACT 60.992 57.895 0.00 0.00 0.00 3.16
4829 5944 1.965754 ATCCCTCCGCTCTGCAACTC 61.966 60.000 0.00 0.00 0.00 3.01
4830 5945 2.125350 CCTCCGCTCTGCAACTCC 60.125 66.667 0.00 0.00 0.00 3.85
4831 5946 2.507992 CTCCGCTCTGCAACTCCG 60.508 66.667 0.00 0.00 0.00 4.63
4832 5947 3.997064 CTCCGCTCTGCAACTCCGG 62.997 68.421 0.00 0.00 40.25 5.14
4833 5948 4.379243 CCGCTCTGCAACTCCGGT 62.379 66.667 0.00 0.00 34.56 5.28
4834 5949 2.357517 CGCTCTGCAACTCCGGTT 60.358 61.111 0.00 0.00 35.86 4.44
4835 5950 1.961277 CGCTCTGCAACTCCGGTTT 60.961 57.895 0.00 0.00 32.73 3.27
4836 5951 1.576421 GCTCTGCAACTCCGGTTTG 59.424 57.895 0.00 7.80 32.73 2.93
4837 5952 1.856265 GCTCTGCAACTCCGGTTTGG 61.856 60.000 16.89 5.11 40.09 3.28
4847 5962 2.890474 CGGTTTGGAGCGGATCGG 60.890 66.667 0.00 0.00 42.72 4.18
4848 5963 3.202706 GGTTTGGAGCGGATCGGC 61.203 66.667 16.92 16.92 0.00 5.54
4849 5964 2.435938 GTTTGGAGCGGATCGGCA 60.436 61.111 25.04 3.95 34.64 5.69
4850 5965 1.819632 GTTTGGAGCGGATCGGCAT 60.820 57.895 25.04 11.61 34.64 4.40
4851 5966 1.819208 TTTGGAGCGGATCGGCATG 60.819 57.895 25.04 0.00 34.64 4.06
4852 5967 4.916293 TGGAGCGGATCGGCATGC 62.916 66.667 25.04 9.90 34.64 4.06
4853 5968 4.916293 GGAGCGGATCGGCATGCA 62.916 66.667 25.04 0.00 34.64 3.96
4854 5969 3.344215 GAGCGGATCGGCATGCAG 61.344 66.667 25.04 16.69 34.64 4.41
4855 5970 4.166888 AGCGGATCGGCATGCAGT 62.167 61.111 25.04 6.32 34.64 4.40
4856 5971 3.204827 GCGGATCGGCATGCAGTT 61.205 61.111 21.36 10.90 0.00 3.16
4857 5972 1.887242 GCGGATCGGCATGCAGTTA 60.887 57.895 21.36 0.05 0.00 2.24
4858 5973 1.934463 CGGATCGGCATGCAGTTAC 59.066 57.895 21.36 10.61 0.00 2.50
4859 5974 1.821241 CGGATCGGCATGCAGTTACG 61.821 60.000 21.36 18.96 0.00 3.18
4860 5975 0.529773 GGATCGGCATGCAGTTACGA 60.530 55.000 21.36 18.53 38.00 3.43
4861 5976 1.502231 GATCGGCATGCAGTTACGAT 58.498 50.000 22.99 22.99 45.70 3.73
4862 5977 1.193203 GATCGGCATGCAGTTACGATG 59.807 52.381 26.30 0.43 43.42 3.84
4863 5978 0.174617 TCGGCATGCAGTTACGATGA 59.825 50.000 21.36 0.00 0.00 2.92
4864 5979 1.202521 TCGGCATGCAGTTACGATGAT 60.203 47.619 21.36 0.00 0.00 2.45
4865 5980 1.599071 CGGCATGCAGTTACGATGATT 59.401 47.619 21.36 0.00 0.00 2.57
4866 5981 2.032054 CGGCATGCAGTTACGATGATTT 59.968 45.455 21.36 0.00 0.00 2.17
4867 5982 3.247411 CGGCATGCAGTTACGATGATTTA 59.753 43.478 21.36 0.00 0.00 1.40
4868 5983 4.609113 CGGCATGCAGTTACGATGATTTAG 60.609 45.833 21.36 0.00 0.00 1.85
4869 5984 4.319766 GGCATGCAGTTACGATGATTTAGG 60.320 45.833 21.36 0.00 0.00 2.69
4870 5985 4.319766 GCATGCAGTTACGATGATTTAGGG 60.320 45.833 14.21 0.00 0.00 3.53
4871 5986 4.746535 TGCAGTTACGATGATTTAGGGA 57.253 40.909 0.00 0.00 0.00 4.20
4872 5987 4.693283 TGCAGTTACGATGATTTAGGGAG 58.307 43.478 0.00 0.00 0.00 4.30
4873 5988 3.495001 GCAGTTACGATGATTTAGGGAGC 59.505 47.826 0.00 0.00 0.00 4.70
4874 5989 3.736252 CAGTTACGATGATTTAGGGAGCG 59.264 47.826 0.00 0.00 0.00 5.03
4875 5990 3.057734 GTTACGATGATTTAGGGAGCGG 58.942 50.000 0.00 0.00 0.00 5.52
4876 5991 1.120530 ACGATGATTTAGGGAGCGGT 58.879 50.000 0.00 0.00 0.00 5.68
4877 5992 1.485066 ACGATGATTTAGGGAGCGGTT 59.515 47.619 0.00 0.00 0.00 4.44
4878 5993 2.696707 ACGATGATTTAGGGAGCGGTTA 59.303 45.455 0.00 0.00 0.00 2.85
4879 5994 3.243771 ACGATGATTTAGGGAGCGGTTAG 60.244 47.826 0.00 0.00 0.00 2.34
4880 5995 3.005472 CGATGATTTAGGGAGCGGTTAGA 59.995 47.826 0.00 0.00 0.00 2.10
4881 5996 4.500887 CGATGATTTAGGGAGCGGTTAGAA 60.501 45.833 0.00 0.00 0.00 2.10
4882 5997 4.133013 TGATTTAGGGAGCGGTTAGAAC 57.867 45.455 0.00 0.00 0.00 3.01
4883 5998 3.118519 TGATTTAGGGAGCGGTTAGAACC 60.119 47.826 0.99 0.99 45.76 3.62
4892 6007 3.471399 GTTAGAACCACGCTCCGC 58.529 61.111 0.00 0.00 0.00 5.54
4893 6008 1.080025 GTTAGAACCACGCTCCGCT 60.080 57.895 0.00 0.00 0.00 5.52
4894 6009 1.077089 GTTAGAACCACGCTCCGCTC 61.077 60.000 0.00 0.00 0.00 5.03
4895 6010 2.221906 TTAGAACCACGCTCCGCTCC 62.222 60.000 0.00 0.00 0.00 4.70
4913 6028 2.280524 CGTGAGGGTTGTTGCCGA 60.281 61.111 0.00 0.00 0.00 5.54
4914 6029 1.890041 CGTGAGGGTTGTTGCCGAA 60.890 57.895 0.00 0.00 0.00 4.30
4915 6030 1.652563 GTGAGGGTTGTTGCCGAAC 59.347 57.895 0.00 0.00 0.00 3.95
4916 6031 1.098712 GTGAGGGTTGTTGCCGAACA 61.099 55.000 0.00 0.00 40.45 3.18
4917 6032 0.817634 TGAGGGTTGTTGCCGAACAG 60.818 55.000 0.00 0.00 43.03 3.16
4918 6033 1.515521 GAGGGTTGTTGCCGAACAGG 61.516 60.000 0.00 0.00 43.03 4.00
4919 6034 2.561037 GGGTTGTTGCCGAACAGGG 61.561 63.158 0.00 0.00 43.03 4.45
4930 6045 2.985896 CCGAACAGGGCTTAAATCTCA 58.014 47.619 0.00 0.00 35.97 3.27
4931 6046 3.343617 CCGAACAGGGCTTAAATCTCAA 58.656 45.455 0.00 0.00 35.97 3.02
4932 6047 3.947834 CCGAACAGGGCTTAAATCTCAAT 59.052 43.478 0.00 0.00 35.97 2.57
4933 6048 4.035675 CCGAACAGGGCTTAAATCTCAATC 59.964 45.833 0.00 0.00 35.97 2.67
4934 6049 4.635765 CGAACAGGGCTTAAATCTCAATCA 59.364 41.667 0.00 0.00 0.00 2.57
4935 6050 5.447818 CGAACAGGGCTTAAATCTCAATCAC 60.448 44.000 0.00 0.00 0.00 3.06
4936 6051 5.184892 ACAGGGCTTAAATCTCAATCACT 57.815 39.130 0.00 0.00 0.00 3.41
4937 6052 5.574188 ACAGGGCTTAAATCTCAATCACTT 58.426 37.500 0.00 0.00 0.00 3.16
4938 6053 6.012745 ACAGGGCTTAAATCTCAATCACTTT 58.987 36.000 0.00 0.00 0.00 2.66
4939 6054 6.071728 ACAGGGCTTAAATCTCAATCACTTTG 60.072 38.462 0.00 0.00 36.61 2.77
4940 6055 6.151648 CAGGGCTTAAATCTCAATCACTTTGA 59.848 38.462 0.00 0.00 42.09 2.69
4941 6056 6.894103 AGGGCTTAAATCTCAATCACTTTGAT 59.106 34.615 0.00 0.00 43.30 2.57
4943 6058 7.704047 GGGCTTAAATCTCAATCACTTTGATTC 59.296 37.037 0.00 0.00 43.03 2.52
4944 6059 8.465201 GGCTTAAATCTCAATCACTTTGATTCT 58.535 33.333 0.00 0.00 43.03 2.40
4945 6060 9.852091 GCTTAAATCTCAATCACTTTGATTCTT 57.148 29.630 0.00 0.00 43.03 2.52
4948 6063 7.401955 AATCTCAATCACTTTGATTCTTCCC 57.598 36.000 0.00 0.00 43.03 3.97
4949 6064 5.256474 TCTCAATCACTTTGATTCTTCCCC 58.744 41.667 0.00 0.00 43.03 4.81
4950 6065 4.009675 TCAATCACTTTGATTCTTCCCCG 58.990 43.478 0.00 0.00 43.03 5.73
4951 6066 3.721087 ATCACTTTGATTCTTCCCCGT 57.279 42.857 0.00 0.00 32.13 5.28
4952 6067 2.778299 TCACTTTGATTCTTCCCCGTG 58.222 47.619 0.00 0.00 0.00 4.94
4953 6068 2.370519 TCACTTTGATTCTTCCCCGTGA 59.629 45.455 0.00 0.00 0.00 4.35
4954 6069 2.484264 CACTTTGATTCTTCCCCGTGAC 59.516 50.000 0.00 0.00 0.00 3.67
4955 6070 2.084546 CTTTGATTCTTCCCCGTGACC 58.915 52.381 0.00 0.00 0.00 4.02
4956 6071 1.060729 TTGATTCTTCCCCGTGACCA 58.939 50.000 0.00 0.00 0.00 4.02
4957 6072 0.323629 TGATTCTTCCCCGTGACCAC 59.676 55.000 0.00 0.00 0.00 4.16
4958 6073 0.323629 GATTCTTCCCCGTGACCACA 59.676 55.000 0.85 0.00 0.00 4.17
4959 6074 0.768622 ATTCTTCCCCGTGACCACAA 59.231 50.000 0.85 0.00 0.00 3.33
4960 6075 0.547075 TTCTTCCCCGTGACCACAAA 59.453 50.000 0.85 0.00 0.00 2.83
4961 6076 0.547075 TCTTCCCCGTGACCACAAAA 59.453 50.000 0.85 0.00 0.00 2.44
4962 6077 0.951558 CTTCCCCGTGACCACAAAAG 59.048 55.000 0.85 0.00 0.00 2.27
4963 6078 0.547075 TTCCCCGTGACCACAAAAGA 59.453 50.000 0.85 0.00 0.00 2.52
4964 6079 0.547075 TCCCCGTGACCACAAAAGAA 59.453 50.000 0.85 0.00 0.00 2.52
4965 6080 0.951558 CCCCGTGACCACAAAAGAAG 59.048 55.000 0.85 0.00 0.00 2.85
4966 6081 0.951558 CCCGTGACCACAAAAGAAGG 59.048 55.000 0.85 0.00 0.00 3.46
4967 6082 0.310854 CCGTGACCACAAAAGAAGGC 59.689 55.000 0.85 0.00 0.00 4.35
4968 6083 0.310854 CGTGACCACAAAAGAAGGCC 59.689 55.000 0.00 0.00 0.00 5.19
4969 6084 1.692411 GTGACCACAAAAGAAGGCCT 58.308 50.000 0.00 0.00 0.00 5.19
4970 6085 1.609072 GTGACCACAAAAGAAGGCCTC 59.391 52.381 5.23 0.00 0.00 4.70
4971 6086 1.248486 GACCACAAAAGAAGGCCTCC 58.752 55.000 5.23 0.00 0.00 4.30
4972 6087 0.853530 ACCACAAAAGAAGGCCTCCT 59.146 50.000 5.23 0.00 33.87 3.69
4973 6088 1.251251 CCACAAAAGAAGGCCTCCTG 58.749 55.000 5.23 1.52 32.13 3.86
4974 6089 1.479389 CCACAAAAGAAGGCCTCCTGT 60.479 52.381 5.23 0.00 32.13 4.00
4975 6090 2.310538 CACAAAAGAAGGCCTCCTGTT 58.689 47.619 5.23 0.00 32.13 3.16
4976 6091 2.035066 CACAAAAGAAGGCCTCCTGTTG 59.965 50.000 19.85 19.85 32.13 3.33
4977 6092 1.000171 CAAAAGAAGGCCTCCTGTTGC 60.000 52.381 9.25 0.00 32.13 4.17
4978 6093 0.185901 AAAGAAGGCCTCCTGTTGCA 59.814 50.000 5.23 0.00 32.13 4.08
4979 6094 0.538287 AAGAAGGCCTCCTGTTGCAC 60.538 55.000 5.23 0.00 32.13 4.57
4980 6095 1.973812 GAAGGCCTCCTGTTGCACC 60.974 63.158 5.23 0.00 32.13 5.01
4981 6096 2.697147 GAAGGCCTCCTGTTGCACCA 62.697 60.000 5.23 0.00 32.13 4.17
4982 6097 2.983725 AAGGCCTCCTGTTGCACCAC 62.984 60.000 5.23 0.00 32.13 4.16
4983 6098 2.113986 GCCTCCTGTTGCACCACT 59.886 61.111 0.00 0.00 0.00 4.00
4984 6099 2.263741 GCCTCCTGTTGCACCACTG 61.264 63.158 0.00 0.00 0.00 3.66
4985 6100 1.601759 CCTCCTGTTGCACCACTGG 60.602 63.158 7.88 7.88 37.16 4.00
4986 6101 1.149174 CTCCTGTTGCACCACTGGT 59.851 57.895 12.58 0.00 37.14 4.00
4999 6114 4.008074 ACCACTGGTGTGTTTATCTCTG 57.992 45.455 0.00 0.00 42.34 3.35
5000 6115 3.391296 ACCACTGGTGTGTTTATCTCTGT 59.609 43.478 0.00 0.00 42.34 3.41
5001 6116 4.141482 ACCACTGGTGTGTTTATCTCTGTT 60.141 41.667 0.00 0.00 42.34 3.16
5002 6117 4.452455 CCACTGGTGTGTTTATCTCTGTTC 59.548 45.833 0.00 0.00 42.34 3.18
5003 6118 4.452455 CACTGGTGTGTTTATCTCTGTTCC 59.548 45.833 0.00 0.00 39.24 3.62
5004 6119 3.659786 TGGTGTGTTTATCTCTGTTCCG 58.340 45.455 0.00 0.00 0.00 4.30
5005 6120 2.415512 GGTGTGTTTATCTCTGTTCCGC 59.584 50.000 0.00 0.00 0.00 5.54
5006 6121 3.326747 GTGTGTTTATCTCTGTTCCGCT 58.673 45.455 0.00 0.00 0.00 5.52
5007 6122 4.491676 GTGTGTTTATCTCTGTTCCGCTA 58.508 43.478 0.00 0.00 0.00 4.26
5008 6123 4.927425 GTGTGTTTATCTCTGTTCCGCTAA 59.073 41.667 0.00 0.00 0.00 3.09
5009 6124 4.927425 TGTGTTTATCTCTGTTCCGCTAAC 59.073 41.667 0.00 0.00 38.67 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 4.433615 CTTCGATCGGAAGGAAGAAATGA 58.566 43.478 16.41 0.00 46.89 2.57
79 81 1.153628 CTCAAACGGGCGGAGGTAG 60.154 63.158 0.00 0.00 0.00 3.18
92 94 1.811266 GGATGCGCTCGAGCTCAAA 60.811 57.895 31.45 16.08 39.36 2.69
157 159 4.082523 CGCTTGGGCCGAAGAGGA 62.083 66.667 29.58 0.00 45.00 3.71
163 165 4.388499 GTTCTCCGCTTGGGCCGA 62.388 66.667 0.00 0.00 34.94 5.54
246 282 1.499438 TCAGATGGAGGTACCGGAGAT 59.501 52.381 9.46 0.00 42.61 2.75
262 298 1.079405 GTGCGGGACCGAAATCAGA 60.079 57.895 15.99 0.00 42.83 3.27
264 300 2.046700 GGTGCGGGACCGAAATCA 60.047 61.111 15.99 0.00 42.83 2.57
302 338 4.264460 AGATTAGATTGACGATCTGGGC 57.736 45.455 14.58 4.44 44.80 5.36
394 430 9.907576 CGCATGAAAAACACAAACTTTATTTTA 57.092 25.926 0.00 0.00 0.00 1.52
438 479 3.887621 AGCACAATACTAGCGGAAGAA 57.112 42.857 0.00 0.00 0.00 2.52
613 678 9.319060 AGATTTATAGATCCTGCTATGAGTGAA 57.681 33.333 0.00 0.00 33.37 3.18
614 679 8.891985 AGATTTATAGATCCTGCTATGAGTGA 57.108 34.615 0.00 0.00 33.37 3.41
649 722 8.284945 TCCAGAGTCCAAATAATCAATTTCTG 57.715 34.615 0.00 0.00 35.54 3.02
661 734 1.661463 TCAGGCTCCAGAGTCCAAAT 58.339 50.000 9.72 0.00 32.35 2.32
690 763 6.681729 AGACAACTAATCTTACAGGGACAA 57.318 37.500 0.00 0.00 0.00 3.18
761 834 4.475345 CTGTAGTATCTTCTAGGGCCAGT 58.525 47.826 6.18 0.00 0.00 4.00
775 849 8.982685 CATTCGATGTTTGATAAGCTGTAGTAT 58.017 33.333 0.00 0.00 0.00 2.12
827 901 5.529289 ACCCAGAAGACATAAGACCTATGA 58.471 41.667 0.00 0.00 40.02 2.15
828 902 5.363868 TGACCCAGAAGACATAAGACCTATG 59.636 44.000 0.00 0.00 42.84 2.23
898 976 7.279981 GCAGATAATACAATAACACAGTCACCA 59.720 37.037 0.00 0.00 0.00 4.17
1013 1091 7.180663 AGGAAGATCAAATTTGTCTGAAGGAT 58.819 34.615 17.47 1.50 0.00 3.24
1019 1097 9.118300 AGCTAATAGGAAGATCAAATTTGTCTG 57.882 33.333 17.47 6.96 0.00 3.51
1199 1277 5.360144 ACTGATAACGAAGGCATGTACTAGT 59.640 40.000 0.00 0.00 0.00 2.57
1207 1285 3.081061 TGCAAACTGATAACGAAGGCAT 58.919 40.909 0.00 0.00 0.00 4.40
1715 1800 3.142174 CTCATGCATCATCACTGAGCAT 58.858 45.455 0.00 0.00 42.14 3.79
1738 1823 6.772716 ACTATGGAAGTGGGTAATGCATAAAG 59.227 38.462 0.00 0.00 36.93 1.85
1769 1854 3.706698 ACATACCGATCTCACATGAACG 58.293 45.455 0.00 0.00 33.11 3.95
1771 1856 5.360999 AGAGAACATACCGATCTCACATGAA 59.639 40.000 0.00 0.00 44.06 2.57
1828 1913 1.531423 CAGACAGAAGCAATGCCACT 58.469 50.000 0.00 0.00 0.00 4.00
1869 1954 9.832445 GGGAGAACAAAGAACATGTAGATATAA 57.168 33.333 0.00 0.00 0.00 0.98
1905 1990 8.632679 TCAAGATTAAAAGCTGACAATCAAACT 58.367 29.630 13.75 0.00 31.25 2.66
1940 2025 5.678955 ACTAGGAACAGAAAGGGTCATAC 57.321 43.478 0.00 0.00 0.00 2.39
2030 2118 3.732774 CGACAGGCAGTGCGTATTTAGTA 60.733 47.826 10.47 0.00 0.00 1.82
2088 2186 7.451877 AGGAGTAATAATCCGCTAGATTCTTCA 59.548 37.037 0.74 0.00 44.34 3.02
2141 2656 7.971183 AGGTACAGAAGATCTTTCAGAAAAC 57.029 36.000 9.87 2.62 0.00 2.43
2144 2659 8.432805 AGAAAAGGTACAGAAGATCTTTCAGAA 58.567 33.333 9.87 0.00 0.00 3.02
2158 2673 2.030805 GTGGCTGCAAGAAAAGGTACAG 60.031 50.000 0.50 0.00 34.07 2.74
2230 2745 7.286775 TCCAACTGCCAAAAGTAACTTAAAGAT 59.713 33.333 0.00 0.00 0.00 2.40
2267 2782 6.493115 TGGCATGATAACTGAAAGGAAAAAGA 59.507 34.615 0.00 0.00 39.30 2.52
2313 2829 4.992951 AGTACTAAAACTGCCAACTTACCG 59.007 41.667 0.00 0.00 0.00 4.02
2328 2844 1.683011 CCGGACGGAGGGAGTACTAAA 60.683 57.143 4.40 0.00 37.50 1.85
2331 2847 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
2332 2848 0.754587 ATTCCGGACGGAGGGAGTAC 60.755 60.000 13.64 0.00 46.06 2.73
2333 2849 0.032813 AATTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2334 2850 0.032813 TAATTCCGGACGGAGGGAGT 60.033 55.000 13.64 1.45 46.06 3.85
2335 2851 0.388294 GTAATTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2336 2852 0.032813 AGTAATTCCGGACGGAGGGA 60.033 55.000 13.64 0.00 46.06 4.20
2337 2853 0.828677 AAGTAATTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2338 2854 1.206371 ACAAGTAATTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2339 2855 2.094390 TGACAAGTAATTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2340 2856 1.894466 TGACAAGTAATTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2341 2857 2.373540 TGACAAGTAATTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2342 2858 3.517602 TGATGACAAGTAATTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2343 2859 5.873179 TTTGATGACAAGTAATTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2344 2860 6.127758 CCATTTTGATGACAAGTAATTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
2345 2861 6.035843 CCATTTTGATGACAAGTAATTCCGG 58.964 40.000 0.00 0.00 37.32 5.14
2346 2862 6.851609 TCCATTTTGATGACAAGTAATTCCG 58.148 36.000 0.00 0.00 37.32 4.30
2347 2863 8.469200 TCATCCATTTTGATGACAAGTAATTCC 58.531 33.333 0.00 0.00 44.65 3.01
2359 2875 9.772973 ATACATCCATTTTCATCCATTTTGATG 57.227 29.630 0.00 0.00 42.84 3.07
2360 2876 9.991906 GATACATCCATTTTCATCCATTTTGAT 57.008 29.630 0.00 0.00 0.00 2.57
2361 2877 9.204337 AGATACATCCATTTTCATCCATTTTGA 57.796 29.630 0.00 0.00 0.00 2.69
2366 2882 9.512588 GTTCTAGATACATCCATTTTCATCCAT 57.487 33.333 0.00 0.00 0.00 3.41
2367 2883 8.717717 AGTTCTAGATACATCCATTTTCATCCA 58.282 33.333 0.00 0.00 0.00 3.41
2400 2916 9.499479 GTCATTGAAATGGATGTATCTAGATGT 57.501 33.333 15.79 1.25 37.03 3.06
2401 2917 9.498176 TGTCATTGAAATGGATGTATCTAGATG 57.502 33.333 15.79 0.00 37.03 2.90
2403 2919 9.551734 CTTGTCATTGAAATGGATGTATCTAGA 57.448 33.333 0.00 0.00 37.03 2.43
2404 2920 9.334947 ACTTGTCATTGAAATGGATGTATCTAG 57.665 33.333 3.31 0.00 37.03 2.43
2406 2922 9.857656 ATACTTGTCATTGAAATGGATGTATCT 57.142 29.630 3.31 0.00 37.03 1.98
2410 2926 8.253113 GGAAATACTTGTCATTGAAATGGATGT 58.747 33.333 3.31 2.77 37.03 3.06
2411 2927 7.433131 CGGAAATACTTGTCATTGAAATGGATG 59.567 37.037 3.31 0.00 37.03 3.51
2412 2928 7.416664 CCGGAAATACTTGTCATTGAAATGGAT 60.417 37.037 0.00 0.00 37.03 3.41
2413 2929 6.127758 CCGGAAATACTTGTCATTGAAATGGA 60.128 38.462 0.00 0.00 37.03 3.41
2414 2930 6.035843 CCGGAAATACTTGTCATTGAAATGG 58.964 40.000 0.00 0.00 37.03 3.16
2415 2931 6.851609 TCCGGAAATACTTGTCATTGAAATG 58.148 36.000 0.00 0.00 37.75 2.32
2416 2932 7.416664 CCATCCGGAAATACTTGTCATTGAAAT 60.417 37.037 9.01 0.00 0.00 2.17
2417 2933 6.127758 CCATCCGGAAATACTTGTCATTGAAA 60.128 38.462 9.01 0.00 0.00 2.69
2418 2934 5.356751 CCATCCGGAAATACTTGTCATTGAA 59.643 40.000 9.01 0.00 0.00 2.69
2419 2935 4.881273 CCATCCGGAAATACTTGTCATTGA 59.119 41.667 9.01 0.00 0.00 2.57
2420 2936 4.881273 TCCATCCGGAAATACTTGTCATTG 59.119 41.667 9.01 0.00 38.83 2.82
2421 2937 5.110814 TCCATCCGGAAATACTTGTCATT 57.889 39.130 9.01 0.00 38.83 2.57
2422 2938 4.444876 CCTCCATCCGGAAATACTTGTCAT 60.445 45.833 9.01 0.00 42.21 3.06
2423 2939 3.118408 CCTCCATCCGGAAATACTTGTCA 60.118 47.826 9.01 0.00 42.21 3.58
2424 2940 3.467803 CCTCCATCCGGAAATACTTGTC 58.532 50.000 9.01 0.00 42.21 3.18
2425 2941 2.172717 CCCTCCATCCGGAAATACTTGT 59.827 50.000 9.01 0.00 42.21 3.16
2426 2942 2.438021 TCCCTCCATCCGGAAATACTTG 59.562 50.000 9.01 0.00 42.21 3.16
2427 2943 2.706190 CTCCCTCCATCCGGAAATACTT 59.294 50.000 9.01 0.00 42.21 2.24
2428 2944 2.330216 CTCCCTCCATCCGGAAATACT 58.670 52.381 9.01 0.00 42.21 2.12
2429 2945 2.047830 ACTCCCTCCATCCGGAAATAC 58.952 52.381 9.01 0.00 42.21 1.89
2430 2946 2.489528 ACTCCCTCCATCCGGAAATA 57.510 50.000 9.01 0.00 42.21 1.40
2431 2947 2.489528 TACTCCCTCCATCCGGAAAT 57.510 50.000 9.01 0.00 42.21 2.17
2432 2948 2.116238 CTTACTCCCTCCATCCGGAAA 58.884 52.381 9.01 0.00 42.21 3.13
2433 2949 1.289830 TCTTACTCCCTCCATCCGGAA 59.710 52.381 9.01 0.00 42.21 4.30
2434 2950 0.931468 TCTTACTCCCTCCATCCGGA 59.069 55.000 6.61 6.61 39.79 5.14
2435 2951 1.133450 TCTCTTACTCCCTCCATCCGG 60.133 57.143 0.00 0.00 0.00 5.14
2436 2952 1.957877 GTCTCTTACTCCCTCCATCCG 59.042 57.143 0.00 0.00 0.00 4.18
2437 2953 3.033659 TGTCTCTTACTCCCTCCATCC 57.966 52.381 0.00 0.00 0.00 3.51
2438 2954 3.244044 GCATGTCTCTTACTCCCTCCATC 60.244 52.174 0.00 0.00 0.00 3.51
2439 2955 2.703007 GCATGTCTCTTACTCCCTCCAT 59.297 50.000 0.00 0.00 0.00 3.41
2440 2956 2.111384 GCATGTCTCTTACTCCCTCCA 58.889 52.381 0.00 0.00 0.00 3.86
2441 2957 2.111384 TGCATGTCTCTTACTCCCTCC 58.889 52.381 0.00 0.00 0.00 4.30
2442 2958 5.011533 ACATATGCATGTCTCTTACTCCCTC 59.988 44.000 10.16 0.00 41.75 4.30
2443 2959 4.904251 ACATATGCATGTCTCTTACTCCCT 59.096 41.667 10.16 0.00 41.75 4.20
2444 2960 5.220710 ACATATGCATGTCTCTTACTCCC 57.779 43.478 10.16 0.00 41.75 4.30
2445 2961 6.283694 TCAACATATGCATGTCTCTTACTCC 58.716 40.000 10.16 0.00 44.83 3.85
2446 2962 7.959689 ATCAACATATGCATGTCTCTTACTC 57.040 36.000 10.16 0.00 44.83 2.59
2478 2994 4.790140 GCACAGAATAATCGCAGAAACAAG 59.210 41.667 0.00 0.00 43.58 3.16
2538 3236 5.848406 ACATAAATTTGAGTCCCGCAAAAA 58.152 33.333 0.00 0.00 36.81 1.94
2539 3237 5.461032 ACATAAATTTGAGTCCCGCAAAA 57.539 34.783 0.00 0.00 36.81 2.44
2540 3238 5.461032 AACATAAATTTGAGTCCCGCAAA 57.539 34.783 0.00 0.00 37.52 3.68
2541 3239 6.767524 ATAACATAAATTTGAGTCCCGCAA 57.232 33.333 0.00 0.00 0.00 4.85
2542 3240 6.767524 AATAACATAAATTTGAGTCCCGCA 57.232 33.333 0.00 0.00 0.00 5.69
2543 3241 7.973944 AGAAAATAACATAAATTTGAGTCCCGC 59.026 33.333 0.00 0.00 0.00 6.13
2544 3242 9.503427 GAGAAAATAACATAAATTTGAGTCCCG 57.497 33.333 0.00 0.00 0.00 5.14
2550 3248 9.357652 GCTGCAGAGAAAATAACATAAATTTGA 57.642 29.630 20.43 0.00 0.00 2.69
2551 3249 8.316046 CGCTGCAGAGAAAATAACATAAATTTG 58.684 33.333 20.43 0.00 0.00 2.32
2552 3250 8.028938 ACGCTGCAGAGAAAATAACATAAATTT 58.971 29.630 25.03 0.00 0.00 1.82
2553 3251 7.538575 ACGCTGCAGAGAAAATAACATAAATT 58.461 30.769 25.03 0.00 0.00 1.82
2554 3252 7.066284 AGACGCTGCAGAGAAAATAACATAAAT 59.934 33.333 25.03 0.00 0.00 1.40
2555 3253 6.371548 AGACGCTGCAGAGAAAATAACATAAA 59.628 34.615 25.03 0.00 0.00 1.40
2556 3254 5.874810 AGACGCTGCAGAGAAAATAACATAA 59.125 36.000 25.03 0.00 0.00 1.90
2557 3255 5.419542 AGACGCTGCAGAGAAAATAACATA 58.580 37.500 25.03 0.00 0.00 2.29
2558 3256 4.256920 AGACGCTGCAGAGAAAATAACAT 58.743 39.130 25.03 0.00 0.00 2.71
2559 3257 3.664107 AGACGCTGCAGAGAAAATAACA 58.336 40.909 25.03 0.00 0.00 2.41
2560 3258 3.929610 AGAGACGCTGCAGAGAAAATAAC 59.070 43.478 25.03 7.72 0.00 1.89
2561 3259 3.928992 CAGAGACGCTGCAGAGAAAATAA 59.071 43.478 25.03 0.00 37.90 1.40
2562 3260 3.515630 CAGAGACGCTGCAGAGAAAATA 58.484 45.455 25.03 0.00 37.90 1.40
2589 3287 5.844004 ACTTCAAATAGCATAGGGTACTCG 58.156 41.667 0.00 0.00 0.00 4.18
2613 3311 2.545596 TTCTGCTGCTGTGTTGCGG 61.546 57.895 0.00 0.00 41.91 5.69
2742 3440 6.199937 AGTTAGTTTGATCAACATGATGGC 57.800 37.500 7.89 0.00 37.20 4.40
2750 3448 6.879458 AGTACATGGGAGTTAGTTTGATCAAC 59.121 38.462 7.89 3.85 35.32 3.18
2752 3450 6.212589 TGAGTACATGGGAGTTAGTTTGATCA 59.787 38.462 0.00 0.00 0.00 2.92
2753 3451 6.640518 TGAGTACATGGGAGTTAGTTTGATC 58.359 40.000 0.00 0.00 0.00 2.92
2800 3498 4.148128 ACACCATATCTCCTTCTTGCAG 57.852 45.455 0.00 0.00 0.00 4.41
2889 3587 7.854337 ACATTGCTTTGGGATTTGAAATATCT 58.146 30.769 0.00 0.00 0.00 1.98
2892 3590 8.592809 ACTAACATTGCTTTGGGATTTGAAATA 58.407 29.630 0.00 0.00 0.00 1.40
2958 3656 5.049167 CAGTCACAGCAAAATAAGGCAAAA 58.951 37.500 0.00 0.00 0.00 2.44
2975 3673 2.474816 GGTGAGACAGACAACAGTCAC 58.525 52.381 0.00 0.00 35.46 3.67
2990 3688 2.135933 GGAAACTCAAGTCACGGTGAG 58.864 52.381 11.83 9.37 45.59 3.51
2991 3689 1.760613 AGGAAACTCAAGTCACGGTGA 59.239 47.619 6.76 6.76 32.90 4.02
2998 3696 3.070302 ACTCAGACCAGGAAACTCAAGTC 59.930 47.826 0.00 0.00 40.21 3.01
3002 3700 3.845860 ACTACTCAGACCAGGAAACTCA 58.154 45.455 0.00 0.00 40.21 3.41
3174 3905 9.368416 AGTCTCAATTATACTTATAGCACTGGA 57.632 33.333 0.00 0.00 0.00 3.86
3236 3967 1.593196 TTGGTCGCTCAGGTTCTTTG 58.407 50.000 0.00 0.00 0.00 2.77
3306 4037 8.028938 CCACCAAAATTTACTAGTTGAATGGAG 58.971 37.037 0.00 2.13 32.80 3.86
3308 4039 7.891561 TCCACCAAAATTTACTAGTTGAATGG 58.108 34.615 0.00 5.69 32.54 3.16
3309 4040 9.927668 ATTCCACCAAAATTTACTAGTTGAATG 57.072 29.630 0.00 0.00 0.00 2.67
3311 4042 8.919145 ACATTCCACCAAAATTTACTAGTTGAA 58.081 29.630 0.00 0.00 0.00 2.69
3313 4044 9.620660 GTACATTCCACCAAAATTTACTAGTTG 57.379 33.333 0.00 0.00 0.00 3.16
3318 4049 8.168058 AGGTAGTACATTCCACCAAAATTTACT 58.832 33.333 2.06 0.00 35.15 2.24
3323 4054 5.506708 GGAGGTAGTACATTCCACCAAAAT 58.493 41.667 14.85 0.00 33.34 1.82
3337 4068 2.442236 ATTTCCGGACGGAGGTAGTA 57.558 50.000 13.64 0.00 46.06 1.82
3338 4069 2.027385 GTATTTCCGGACGGAGGTAGT 58.973 52.381 13.64 0.00 46.06 2.73
3339 4070 2.305009 AGTATTTCCGGACGGAGGTAG 58.695 52.381 13.64 0.00 46.06 3.18
3340 4071 2.428171 CAAGTATTTCCGGACGGAGGTA 59.572 50.000 13.64 8.09 46.06 3.08
3341 4072 1.206371 CAAGTATTTCCGGACGGAGGT 59.794 52.381 13.64 9.03 46.06 3.85
3342 4073 1.935933 CAAGTATTTCCGGACGGAGG 58.064 55.000 13.64 0.00 46.06 4.30
3343 4074 1.287425 GCAAGTATTTCCGGACGGAG 58.713 55.000 13.64 1.75 46.06 4.63
3344 4075 0.108041 GGCAAGTATTTCCGGACGGA 60.108 55.000 1.83 9.76 43.52 4.69
3345 4076 0.391927 TGGCAAGTATTTCCGGACGG 60.392 55.000 1.83 3.96 0.00 4.79
3346 4077 1.597663 GATGGCAAGTATTTCCGGACG 59.402 52.381 1.83 0.00 0.00 4.79
3347 4078 2.639065 TGATGGCAAGTATTTCCGGAC 58.361 47.619 1.83 0.00 0.00 4.79
3348 4079 3.358111 TTGATGGCAAGTATTTCCGGA 57.642 42.857 0.00 0.00 0.00 5.14
3349 4080 4.448537 TTTTGATGGCAAGTATTTCCGG 57.551 40.909 0.00 0.00 35.04 5.14
3350 4081 4.805192 CCATTTTGATGGCAAGTATTTCCG 59.195 41.667 0.00 0.00 35.04 4.30
3351 4082 5.976458 TCCATTTTGATGGCAAGTATTTCC 58.024 37.500 0.00 0.00 41.43 3.13
3352 4083 9.598517 TTTATCCATTTTGATGGCAAGTATTTC 57.401 29.630 0.00 0.00 41.43 2.17
3353 4084 9.956640 TTTTATCCATTTTGATGGCAAGTATTT 57.043 25.926 0.00 0.00 41.43 1.40
3354 4085 9.603921 CTTTTATCCATTTTGATGGCAAGTATT 57.396 29.630 0.00 0.00 41.43 1.89
3355 4086 8.980596 TCTTTTATCCATTTTGATGGCAAGTAT 58.019 29.630 0.00 0.00 41.43 2.12
3356 4087 8.359875 TCTTTTATCCATTTTGATGGCAAGTA 57.640 30.769 0.00 0.00 41.43 2.24
3357 4088 7.243604 TCTTTTATCCATTTTGATGGCAAGT 57.756 32.000 0.00 0.00 41.43 3.16
3358 4089 8.036575 TCTTCTTTTATCCATTTTGATGGCAAG 58.963 33.333 0.00 1.81 41.43 4.01
3359 4090 7.905265 TCTTCTTTTATCCATTTTGATGGCAA 58.095 30.769 0.00 0.00 41.43 4.52
3360 4091 7.479352 TCTTCTTTTATCCATTTTGATGGCA 57.521 32.000 0.00 0.00 41.43 4.92
3361 4092 7.983484 ACATCTTCTTTTATCCATTTTGATGGC 59.017 33.333 0.00 0.00 41.43 4.40
3393 4124 9.708092 GGGGTGTATCTAGAACTAAAATACATC 57.292 37.037 0.00 13.73 35.81 3.06
3394 4125 9.448587 AGGGGTGTATCTAGAACTAAAATACAT 57.551 33.333 0.00 3.35 35.81 2.29
3395 4126 8.849543 AGGGGTGTATCTAGAACTAAAATACA 57.150 34.615 0.00 0.00 32.07 2.29
3402 4133 8.931568 GGATAAAAAGGGGTGTATCTAGAACTA 58.068 37.037 0.00 0.00 0.00 2.24
3403 4134 7.404980 TGGATAAAAAGGGGTGTATCTAGAACT 59.595 37.037 0.00 0.00 0.00 3.01
3404 4135 7.571025 TGGATAAAAAGGGGTGTATCTAGAAC 58.429 38.462 0.00 0.00 0.00 3.01
3405 4136 7.758820 TGGATAAAAAGGGGTGTATCTAGAA 57.241 36.000 0.00 0.00 0.00 2.10
3406 4137 7.947782 ATGGATAAAAAGGGGTGTATCTAGA 57.052 36.000 0.00 0.00 0.00 2.43
3407 4138 8.996651 AAATGGATAAAAAGGGGTGTATCTAG 57.003 34.615 0.00 0.00 0.00 2.43
3408 4139 9.196139 CAAAATGGATAAAAAGGGGTGTATCTA 57.804 33.333 0.00 0.00 0.00 1.98
3409 4140 7.898636 TCAAAATGGATAAAAAGGGGTGTATCT 59.101 33.333 0.00 0.00 0.00 1.98
3410 4141 8.073467 TCAAAATGGATAAAAAGGGGTGTATC 57.927 34.615 0.00 0.00 0.00 2.24
3411 4142 8.442660 TTCAAAATGGATAAAAAGGGGTGTAT 57.557 30.769 0.00 0.00 0.00 2.29
3412 4143 7.730784 TCTTCAAAATGGATAAAAAGGGGTGTA 59.269 33.333 0.00 0.00 0.00 2.90
3413 4144 6.556874 TCTTCAAAATGGATAAAAAGGGGTGT 59.443 34.615 0.00 0.00 0.00 4.16
3414 4145 6.873605 GTCTTCAAAATGGATAAAAAGGGGTG 59.126 38.462 0.00 0.00 0.00 4.61
3415 4146 6.556874 TGTCTTCAAAATGGATAAAAAGGGGT 59.443 34.615 0.00 0.00 0.00 4.95
3416 4147 6.873605 GTGTCTTCAAAATGGATAAAAAGGGG 59.126 38.462 0.00 0.00 0.00 4.79
3417 4148 6.586082 CGTGTCTTCAAAATGGATAAAAAGGG 59.414 38.462 0.00 0.00 0.00 3.95
3418 4149 7.145323 ACGTGTCTTCAAAATGGATAAAAAGG 58.855 34.615 0.00 0.00 0.00 3.11
3419 4150 9.840427 ATACGTGTCTTCAAAATGGATAAAAAG 57.160 29.630 0.00 0.00 0.00 2.27
3423 4154 9.834628 GAAAATACGTGTCTTCAAAATGGATAA 57.165 29.630 0.00 0.00 0.00 1.75
3424 4155 8.172484 CGAAAATACGTGTCTTCAAAATGGATA 58.828 33.333 0.00 0.00 0.00 2.59
3425 4156 7.021196 CGAAAATACGTGTCTTCAAAATGGAT 58.979 34.615 0.00 0.00 0.00 3.41
3426 4157 6.367421 CGAAAATACGTGTCTTCAAAATGGA 58.633 36.000 0.00 0.00 0.00 3.41
3427 4158 5.567534 CCGAAAATACGTGTCTTCAAAATGG 59.432 40.000 0.00 0.00 0.00 3.16
3428 4159 6.302313 GTCCGAAAATACGTGTCTTCAAAATG 59.698 38.462 0.00 0.00 0.00 2.32
3429 4160 6.368213 GTCCGAAAATACGTGTCTTCAAAAT 58.632 36.000 0.00 0.00 0.00 1.82
3430 4161 5.556758 CGTCCGAAAATACGTGTCTTCAAAA 60.557 40.000 0.00 0.00 34.48 2.44
3431 4162 4.084952 CGTCCGAAAATACGTGTCTTCAAA 60.085 41.667 0.00 0.00 34.48 2.69
3432 4163 3.426191 CGTCCGAAAATACGTGTCTTCAA 59.574 43.478 0.00 0.00 34.48 2.69
3433 4164 2.981805 CGTCCGAAAATACGTGTCTTCA 59.018 45.455 0.00 0.00 34.48 3.02
3434 4165 2.343544 CCGTCCGAAAATACGTGTCTTC 59.656 50.000 0.00 0.00 37.40 2.87
3435 4166 2.030007 TCCGTCCGAAAATACGTGTCTT 60.030 45.455 0.00 0.00 37.40 3.01
3436 4167 1.541147 TCCGTCCGAAAATACGTGTCT 59.459 47.619 0.00 0.00 37.40 3.41
3437 4168 1.916000 CTCCGTCCGAAAATACGTGTC 59.084 52.381 0.00 0.00 37.40 3.67
3438 4169 1.403249 CCTCCGTCCGAAAATACGTGT 60.403 52.381 0.00 0.00 37.40 4.49
3439 4170 1.274596 CCTCCGTCCGAAAATACGTG 58.725 55.000 0.00 0.00 37.40 4.49
3440 4171 0.890683 ACCTCCGTCCGAAAATACGT 59.109 50.000 0.00 0.00 37.40 3.57
3441 4172 2.098117 ACTACCTCCGTCCGAAAATACG 59.902 50.000 0.00 0.00 38.80 3.06
3442 4173 3.790152 ACTACCTCCGTCCGAAAATAC 57.210 47.619 0.00 0.00 0.00 1.89
3443 4174 5.132502 TGATACTACCTCCGTCCGAAAATA 58.867 41.667 0.00 0.00 0.00 1.40
3444 4175 3.956199 TGATACTACCTCCGTCCGAAAAT 59.044 43.478 0.00 0.00 0.00 1.82
3445 4176 3.355378 TGATACTACCTCCGTCCGAAAA 58.645 45.455 0.00 0.00 0.00 2.29
3446 4177 3.003394 TGATACTACCTCCGTCCGAAA 57.997 47.619 0.00 0.00 0.00 3.46
3447 4178 2.715749 TGATACTACCTCCGTCCGAA 57.284 50.000 0.00 0.00 0.00 4.30
3448 4179 2.715749 TTGATACTACCTCCGTCCGA 57.284 50.000 0.00 0.00 0.00 4.55
3449 4180 4.317671 AAATTGATACTACCTCCGTCCG 57.682 45.455 0.00 0.00 0.00 4.79
3450 4181 8.557029 CAAAATAAATTGATACTACCTCCGTCC 58.443 37.037 0.00 0.00 31.84 4.79
3451 4182 8.068380 GCAAAATAAATTGATACTACCTCCGTC 58.932 37.037 0.00 0.00 31.84 4.79
3452 4183 7.012989 GGCAAAATAAATTGATACTACCTCCGT 59.987 37.037 0.00 0.00 31.84 4.69
3453 4184 7.360361 GGCAAAATAAATTGATACTACCTCCG 58.640 38.462 0.00 0.00 31.84 4.63
3454 4185 7.012989 ACGGCAAAATAAATTGATACTACCTCC 59.987 37.037 0.00 0.00 31.84 4.30
3455 4186 7.927048 ACGGCAAAATAAATTGATACTACCTC 58.073 34.615 0.00 0.00 31.84 3.85
3456 4187 7.875327 ACGGCAAAATAAATTGATACTACCT 57.125 32.000 0.00 0.00 31.84 3.08
3457 4188 8.185505 TGAACGGCAAAATAAATTGATACTACC 58.814 33.333 0.00 0.00 31.84 3.18
3458 4189 9.730420 ATGAACGGCAAAATAAATTGATACTAC 57.270 29.630 0.00 0.00 31.84 2.73
3469 4200 7.925043 TCCTTAGTAATGAACGGCAAAATAA 57.075 32.000 0.00 0.00 0.00 1.40
3473 4204 4.698304 CCTTCCTTAGTAATGAACGGCAAA 59.302 41.667 0.00 0.00 0.00 3.68
3487 4218 3.012518 CAACATGCAGGTCCTTCCTTAG 58.987 50.000 3.65 0.00 45.67 2.18
3669 4400 0.320683 CCGTGCTCTGTGATGTGGAA 60.321 55.000 0.00 0.00 0.00 3.53
3676 4407 3.545574 TGGCACCGTGCTCTGTGA 61.546 61.111 22.41 0.00 44.28 3.58
3683 4414 1.369568 GTTTTACGTGGCACCGTGC 60.370 57.895 15.50 15.50 41.92 5.34
3689 4420 1.892862 CCCGTGGTTTTACGTGGCA 60.893 57.895 0.00 0.00 42.24 4.92
3780 4511 3.507233 TCTCAAAATGGCCATCACAAGAC 59.493 43.478 21.08 0.00 0.00 3.01
3794 4525 7.116948 CACAGTTACTCATCGAGTTCTCAAAAT 59.883 37.037 1.36 0.00 40.28 1.82
3795 4526 6.420903 CACAGTTACTCATCGAGTTCTCAAAA 59.579 38.462 1.36 0.00 40.28 2.44
3796 4527 5.920840 CACAGTTACTCATCGAGTTCTCAAA 59.079 40.000 1.36 0.00 40.28 2.69
3803 4536 5.392767 AATGTCACAGTTACTCATCGAGT 57.607 39.130 1.75 1.75 45.54 4.18
3807 4540 5.168569 TCGGAAATGTCACAGTTACTCATC 58.831 41.667 0.00 0.00 0.00 2.92
3817 4550 5.298026 TCAAATGACTTTCGGAAATGTCACA 59.702 36.000 24.55 13.51 46.30 3.58
3889 4623 5.375417 TGATGCACAAAGTGTTAAGATGG 57.625 39.130 0.00 0.00 35.75 3.51
3946 4680 0.389948 TCGGCTCTTCTTTCTTCGCC 60.390 55.000 0.00 0.00 0.00 5.54
3947 4681 1.429463 TTCGGCTCTTCTTTCTTCGC 58.571 50.000 0.00 0.00 0.00 4.70
3967 4701 2.286365 TTCCCGTGAAGGCTGAAAAT 57.714 45.000 0.00 0.00 39.21 1.82
3976 4710 3.258622 AGGAGTACTTCTTTCCCGTGAAG 59.741 47.826 0.00 0.00 43.63 3.02
4109 4843 1.749258 GTCCACGGAAAGATGCCCC 60.749 63.158 0.00 0.00 0.00 5.80
4121 4856 2.386661 AGAAGCATTGGTAGTCCACG 57.613 50.000 0.00 0.00 44.22 4.94
4236 4971 4.673580 GCAGACAAATGCAATGTGGAGTAG 60.674 45.833 12.67 0.00 45.77 2.57
4241 4976 1.342555 CGCAGACAAATGCAATGTGG 58.657 50.000 12.67 6.57 46.87 4.17
4301 5036 6.597280 AGAGCTATTTCCATCAAACAAGAGAC 59.403 38.462 0.00 0.00 0.00 3.36
4303 5038 6.998968 AGAGCTATTTCCATCAAACAAGAG 57.001 37.500 0.00 0.00 0.00 2.85
4338 5122 1.006162 GGCACTTACCATTTGGGGGTA 59.994 52.381 0.96 0.00 42.91 3.69
4339 5123 0.252057 GGCACTTACCATTTGGGGGT 60.252 55.000 0.96 0.00 42.91 4.95
4340 5124 0.252012 TGGCACTTACCATTTGGGGG 60.252 55.000 0.96 0.00 42.91 5.40
4341 5125 0.894835 GTGGCACTTACCATTTGGGG 59.105 55.000 11.13 0.00 43.01 4.96
4342 5126 1.272212 GTGTGGCACTTACCATTTGGG 59.728 52.381 19.83 0.00 43.01 4.12
4343 5127 2.238521 AGTGTGGCACTTACCATTTGG 58.761 47.619 19.83 0.00 42.59 3.28
4344 5128 5.401550 CATTAGTGTGGCACTTACCATTTG 58.598 41.667 19.83 2.99 42.59 2.32
4345 5129 4.462483 CCATTAGTGTGGCACTTACCATTT 59.538 41.667 19.83 0.00 42.59 2.32
4346 5130 4.016444 CCATTAGTGTGGCACTTACCATT 58.984 43.478 19.83 0.00 42.59 3.16
4347 5131 3.620488 CCATTAGTGTGGCACTTACCAT 58.380 45.455 19.83 2.23 42.59 3.55
4348 5132 3.066291 CCATTAGTGTGGCACTTACCA 57.934 47.619 19.83 0.00 42.59 3.25
4357 5141 5.437060 ACCTAATAAGTGCCATTAGTGTGG 58.563 41.667 0.00 0.00 42.35 4.17
4358 5142 6.112734 TGACCTAATAAGTGCCATTAGTGTG 58.887 40.000 0.00 0.00 35.21 3.82
4359 5143 6.308015 TGACCTAATAAGTGCCATTAGTGT 57.692 37.500 0.00 0.00 35.21 3.55
4360 5144 7.807977 AATGACCTAATAAGTGCCATTAGTG 57.192 36.000 0.00 0.00 35.21 2.74
4361 5145 8.823220 AAAATGACCTAATAAGTGCCATTAGT 57.177 30.769 0.00 0.00 35.21 2.24
4365 5149 9.474313 TCTTTAAAATGACCTAATAAGTGCCAT 57.526 29.630 0.00 0.00 0.00 4.40
4366 5150 8.871629 TCTTTAAAATGACCTAATAAGTGCCA 57.128 30.769 0.00 0.00 0.00 4.92
4376 5160 9.574516 AGAGCTCTTTTTCTTTAAAATGACCTA 57.425 29.630 11.45 0.00 35.18 3.08
4377 5161 8.470657 AGAGCTCTTTTTCTTTAAAATGACCT 57.529 30.769 11.45 0.00 35.18 3.85
4380 5164 9.899226 GCTAAGAGCTCTTTTTCTTTAAAATGA 57.101 29.630 32.70 9.70 38.45 2.57
4381 5165 9.683069 TGCTAAGAGCTCTTTTTCTTTAAAATG 57.317 29.630 32.70 3.86 42.97 2.32
4383 5167 9.736023 CTTGCTAAGAGCTCTTTTTCTTTAAAA 57.264 29.630 32.70 10.85 42.97 1.52
4384 5168 8.352942 CCTTGCTAAGAGCTCTTTTTCTTTAAA 58.647 33.333 32.70 11.58 42.97 1.52
4385 5169 7.719633 TCCTTGCTAAGAGCTCTTTTTCTTTAA 59.280 33.333 32.70 16.63 42.97 1.52
4386 5170 7.224297 TCCTTGCTAAGAGCTCTTTTTCTTTA 58.776 34.615 32.70 13.03 42.97 1.85
4391 5175 7.171653 ACTATTCCTTGCTAAGAGCTCTTTTT 58.828 34.615 32.70 13.00 42.97 1.94
4445 5229 8.952278 TCTCACTTTAGAGTTAACAAGCAAAAA 58.048 29.630 8.61 0.00 36.97 1.94
4449 5234 8.500753 TTTTCTCACTTTAGAGTTAACAAGCA 57.499 30.769 8.61 0.00 36.97 3.91
4515 5310 6.190954 AGTTCTTGTTTGTGGTGAACTAAC 57.809 37.500 0.00 0.00 43.45 2.34
4574 5369 1.920574 CGACACCATGTAGAAGAAGCG 59.079 52.381 0.00 0.00 0.00 4.68
4589 5384 1.891919 TGTGCCTTTGCTCCGACAC 60.892 57.895 0.00 0.00 38.71 3.67
4593 5388 2.034879 ATCGTGTGCCTTTGCTCCG 61.035 57.895 0.00 0.00 38.71 4.63
4612 5407 2.803492 GCATAGGTGAGATCGTCAACCC 60.803 54.545 6.59 1.86 45.06 4.11
4619 5414 1.600663 GGACGTGCATAGGTGAGATCG 60.601 57.143 0.63 0.00 0.00 3.69
4672 5787 2.091333 AGGATGGTGTTTTGGAGTTGGT 60.091 45.455 0.00 0.00 0.00 3.67
4708 5823 0.534877 ACAGCGTTGCTCCATGTCAA 60.535 50.000 0.00 0.00 36.40 3.18
4709 5824 1.071299 ACAGCGTTGCTCCATGTCA 59.929 52.632 0.00 0.00 36.40 3.58
4783 5898 1.344438 CGCTCCCTTAGTATGCCATCA 59.656 52.381 0.00 0.00 0.00 3.07
4798 5913 4.162690 AGGGATGCCGAACGCTCC 62.163 66.667 0.00 0.00 38.78 4.70
4799 5914 2.586357 GAGGGATGCCGAACGCTC 60.586 66.667 0.00 0.00 38.78 5.03
4800 5915 4.162690 GGAGGGATGCCGAACGCT 62.163 66.667 0.00 0.00 38.78 5.07
4807 5922 4.925861 GCAGAGCGGAGGGATGCC 62.926 72.222 0.00 0.00 0.00 4.40
4808 5923 3.687321 TTGCAGAGCGGAGGGATGC 62.687 63.158 0.00 0.00 37.40 3.91
4809 5924 1.817099 GTTGCAGAGCGGAGGGATG 60.817 63.158 0.00 0.00 0.00 3.51
4810 5925 1.965754 GAGTTGCAGAGCGGAGGGAT 61.966 60.000 0.00 0.00 0.00 3.85
4811 5926 2.604686 AGTTGCAGAGCGGAGGGA 60.605 61.111 0.00 0.00 0.00 4.20
4812 5927 2.125350 GAGTTGCAGAGCGGAGGG 60.125 66.667 0.00 0.00 0.00 4.30
4813 5928 2.125350 GGAGTTGCAGAGCGGAGG 60.125 66.667 0.00 0.00 0.00 4.30
4814 5929 2.507992 CGGAGTTGCAGAGCGGAG 60.508 66.667 0.00 0.00 0.00 4.63
4815 5930 4.069232 CCGGAGTTGCAGAGCGGA 62.069 66.667 0.00 0.00 0.00 5.54
4816 5931 3.883744 AACCGGAGTTGCAGAGCGG 62.884 63.158 9.46 0.00 33.97 5.52
4817 5932 1.961277 AAACCGGAGTTGCAGAGCG 60.961 57.895 9.46 0.00 35.97 5.03
4818 5933 1.576421 CAAACCGGAGTTGCAGAGC 59.424 57.895 9.46 0.00 35.97 4.09
4819 5934 0.250295 TCCAAACCGGAGTTGCAGAG 60.250 55.000 9.46 0.00 39.64 3.35
4820 5935 1.833606 TCCAAACCGGAGTTGCAGA 59.166 52.632 9.46 3.08 39.64 4.26
4821 5936 4.473643 TCCAAACCGGAGTTGCAG 57.526 55.556 9.46 0.55 39.64 4.41
4829 5944 2.890474 CGATCCGCTCCAAACCGG 60.890 66.667 0.00 0.00 45.64 5.28
4830 5945 2.890474 CCGATCCGCTCCAAACCG 60.890 66.667 0.00 0.00 0.00 4.44
4831 5946 3.202706 GCCGATCCGCTCCAAACC 61.203 66.667 0.00 0.00 0.00 3.27
4832 5947 1.819632 ATGCCGATCCGCTCCAAAC 60.820 57.895 7.56 0.00 0.00 2.93
4833 5948 1.819208 CATGCCGATCCGCTCCAAA 60.819 57.895 7.56 0.00 0.00 3.28
4834 5949 2.203056 CATGCCGATCCGCTCCAA 60.203 61.111 7.56 0.00 0.00 3.53
4835 5950 4.916293 GCATGCCGATCCGCTCCA 62.916 66.667 6.36 0.00 0.00 3.86
4836 5951 4.916293 TGCATGCCGATCCGCTCC 62.916 66.667 16.68 0.00 0.00 4.70
4837 5952 3.344215 CTGCATGCCGATCCGCTC 61.344 66.667 16.68 0.00 0.00 5.03
4838 5953 2.310327 TAACTGCATGCCGATCCGCT 62.310 55.000 16.68 0.00 0.00 5.52
4839 5954 1.887242 TAACTGCATGCCGATCCGC 60.887 57.895 16.68 0.00 0.00 5.54
4840 5955 1.821241 CGTAACTGCATGCCGATCCG 61.821 60.000 16.68 8.46 0.00 4.18
4841 5956 0.529773 TCGTAACTGCATGCCGATCC 60.530 55.000 16.68 0.00 0.00 3.36
4842 5957 1.193203 CATCGTAACTGCATGCCGATC 59.807 52.381 21.01 8.64 36.22 3.69
4843 5958 1.202521 TCATCGTAACTGCATGCCGAT 60.203 47.619 18.97 18.97 38.68 4.18
4844 5959 0.174617 TCATCGTAACTGCATGCCGA 59.825 50.000 16.68 16.52 0.00 5.54
4845 5960 1.220529 ATCATCGTAACTGCATGCCG 58.779 50.000 16.68 12.01 0.00 5.69
4846 5961 3.698029 AAATCATCGTAACTGCATGCC 57.302 42.857 16.68 0.00 0.00 4.40
4847 5962 4.319766 CCCTAAATCATCGTAACTGCATGC 60.320 45.833 11.82 11.82 0.00 4.06
4848 5963 5.056480 TCCCTAAATCATCGTAACTGCATG 58.944 41.667 0.00 0.00 0.00 4.06
4849 5964 5.290493 TCCCTAAATCATCGTAACTGCAT 57.710 39.130 0.00 0.00 0.00 3.96
4850 5965 4.693283 CTCCCTAAATCATCGTAACTGCA 58.307 43.478 0.00 0.00 0.00 4.41
4851 5966 3.495001 GCTCCCTAAATCATCGTAACTGC 59.505 47.826 0.00 0.00 0.00 4.40
4852 5967 3.736252 CGCTCCCTAAATCATCGTAACTG 59.264 47.826 0.00 0.00 0.00 3.16
4853 5968 3.243771 CCGCTCCCTAAATCATCGTAACT 60.244 47.826 0.00 0.00 0.00 2.24
4854 5969 3.057734 CCGCTCCCTAAATCATCGTAAC 58.942 50.000 0.00 0.00 0.00 2.50
4855 5970 2.696707 ACCGCTCCCTAAATCATCGTAA 59.303 45.455 0.00 0.00 0.00 3.18
4856 5971 2.313317 ACCGCTCCCTAAATCATCGTA 58.687 47.619 0.00 0.00 0.00 3.43
4857 5972 1.120530 ACCGCTCCCTAAATCATCGT 58.879 50.000 0.00 0.00 0.00 3.73
4858 5973 2.240493 AACCGCTCCCTAAATCATCG 57.760 50.000 0.00 0.00 0.00 3.84
4859 5974 4.602340 TCTAACCGCTCCCTAAATCATC 57.398 45.455 0.00 0.00 0.00 2.92
4860 5975 4.444449 GGTTCTAACCGCTCCCTAAATCAT 60.444 45.833 0.00 0.00 39.66 2.45
4861 5976 3.118519 GGTTCTAACCGCTCCCTAAATCA 60.119 47.826 0.00 0.00 39.66 2.57
4862 5977 3.464907 GGTTCTAACCGCTCCCTAAATC 58.535 50.000 0.00 0.00 39.66 2.17
4863 5978 3.555527 GGTTCTAACCGCTCCCTAAAT 57.444 47.619 0.00 0.00 39.66 1.40
4895 6010 3.353836 CGGCAACAACCCTCACGG 61.354 66.667 0.00 0.00 37.81 4.94
4896 6011 1.890041 TTCGGCAACAACCCTCACG 60.890 57.895 0.00 0.00 0.00 4.35
4897 6012 1.098712 TGTTCGGCAACAACCCTCAC 61.099 55.000 0.94 0.00 39.69 3.51
4898 6013 0.817634 CTGTTCGGCAACAACCCTCA 60.818 55.000 4.52 0.00 42.13 3.86
4899 6014 1.515521 CCTGTTCGGCAACAACCCTC 61.516 60.000 4.52 0.00 42.13 4.30
4900 6015 1.528309 CCTGTTCGGCAACAACCCT 60.528 57.895 4.52 0.00 42.13 4.34
4901 6016 2.561037 CCCTGTTCGGCAACAACCC 61.561 63.158 4.52 0.00 42.13 4.11
4902 6017 3.039134 CCCTGTTCGGCAACAACC 58.961 61.111 4.52 0.00 42.13 3.77
4910 6025 2.985896 TGAGATTTAAGCCCTGTTCGG 58.014 47.619 0.00 0.00 0.00 4.30
4911 6026 4.635765 TGATTGAGATTTAAGCCCTGTTCG 59.364 41.667 0.00 0.00 0.00 3.95
4912 6027 5.649831 AGTGATTGAGATTTAAGCCCTGTTC 59.350 40.000 0.00 0.00 0.00 3.18
4913 6028 5.574188 AGTGATTGAGATTTAAGCCCTGTT 58.426 37.500 0.00 0.00 0.00 3.16
4914 6029 5.184892 AGTGATTGAGATTTAAGCCCTGT 57.815 39.130 0.00 0.00 0.00 4.00
4915 6030 6.151648 TCAAAGTGATTGAGATTTAAGCCCTG 59.848 38.462 0.00 0.00 43.08 4.45
4916 6031 6.248433 TCAAAGTGATTGAGATTTAAGCCCT 58.752 36.000 0.00 0.00 43.08 5.19
4917 6032 6.515272 TCAAAGTGATTGAGATTTAAGCCC 57.485 37.500 0.00 0.00 43.08 5.19
4929 6044 3.758554 ACGGGGAAGAATCAAAGTGATTG 59.241 43.478 8.16 0.00 46.20 2.67
4931 6046 3.009033 TCACGGGGAAGAATCAAAGTGAT 59.991 43.478 0.00 0.00 39.09 3.06
4932 6047 2.370519 TCACGGGGAAGAATCAAAGTGA 59.629 45.455 0.00 0.00 33.90 3.41
4933 6048 2.484264 GTCACGGGGAAGAATCAAAGTG 59.516 50.000 0.00 0.00 0.00 3.16
4934 6049 2.552373 GGTCACGGGGAAGAATCAAAGT 60.552 50.000 0.00 0.00 0.00 2.66
4935 6050 2.084546 GGTCACGGGGAAGAATCAAAG 58.915 52.381 0.00 0.00 0.00 2.77
4936 6051 1.422024 TGGTCACGGGGAAGAATCAAA 59.578 47.619 0.00 0.00 0.00 2.69
4937 6052 1.060729 TGGTCACGGGGAAGAATCAA 58.939 50.000 0.00 0.00 0.00 2.57
4938 6053 0.323629 GTGGTCACGGGGAAGAATCA 59.676 55.000 0.00 0.00 0.00 2.57
4939 6054 0.323629 TGTGGTCACGGGGAAGAATC 59.676 55.000 0.00 0.00 0.00 2.52
4940 6055 0.768622 TTGTGGTCACGGGGAAGAAT 59.231 50.000 0.00 0.00 0.00 2.40
4941 6056 0.547075 TTTGTGGTCACGGGGAAGAA 59.453 50.000 0.00 0.00 0.00 2.52
4942 6057 0.547075 TTTTGTGGTCACGGGGAAGA 59.453 50.000 0.00 0.00 0.00 2.87
4943 6058 0.951558 CTTTTGTGGTCACGGGGAAG 59.048 55.000 0.00 0.00 0.00 3.46
4944 6059 0.547075 TCTTTTGTGGTCACGGGGAA 59.453 50.000 0.00 0.00 0.00 3.97
4945 6060 0.547075 TTCTTTTGTGGTCACGGGGA 59.453 50.000 0.00 0.00 0.00 4.81
4946 6061 0.951558 CTTCTTTTGTGGTCACGGGG 59.048 55.000 0.00 0.00 0.00 5.73
4947 6062 0.951558 CCTTCTTTTGTGGTCACGGG 59.048 55.000 0.00 0.00 0.00 5.28
4948 6063 0.310854 GCCTTCTTTTGTGGTCACGG 59.689 55.000 0.00 0.00 0.00 4.94
4949 6064 0.310854 GGCCTTCTTTTGTGGTCACG 59.689 55.000 0.00 0.00 0.00 4.35
4950 6065 1.609072 GAGGCCTTCTTTTGTGGTCAC 59.391 52.381 6.77 0.00 0.00 3.67
4951 6066 1.478654 GGAGGCCTTCTTTTGTGGTCA 60.479 52.381 6.77 0.00 0.00 4.02
4952 6067 1.202940 AGGAGGCCTTCTTTTGTGGTC 60.203 52.381 8.16 0.00 0.00 4.02
4953 6068 0.853530 AGGAGGCCTTCTTTTGTGGT 59.146 50.000 8.16 0.00 0.00 4.16
4954 6069 1.251251 CAGGAGGCCTTCTTTTGTGG 58.749 55.000 12.31 0.00 0.00 4.17
4955 6070 1.986882 ACAGGAGGCCTTCTTTTGTG 58.013 50.000 12.31 2.72 0.00 3.33
4956 6071 2.310538 CAACAGGAGGCCTTCTTTTGT 58.689 47.619 26.15 14.20 0.00 2.83
4957 6072 1.000171 GCAACAGGAGGCCTTCTTTTG 60.000 52.381 28.96 28.96 0.00 2.44
4958 6073 1.332195 GCAACAGGAGGCCTTCTTTT 58.668 50.000 12.31 9.16 0.00 2.27
4959 6074 0.185901 TGCAACAGGAGGCCTTCTTT 59.814 50.000 12.31 0.81 0.00 2.52
4960 6075 0.538287 GTGCAACAGGAGGCCTTCTT 60.538 55.000 12.31 0.00 36.32 2.52
4961 6076 1.073897 GTGCAACAGGAGGCCTTCT 59.926 57.895 8.16 8.16 36.32 2.85
4962 6077 1.973812 GGTGCAACAGGAGGCCTTC 60.974 63.158 6.77 3.97 39.98 3.46
4963 6078 2.116125 GGTGCAACAGGAGGCCTT 59.884 61.111 6.77 0.00 39.98 4.35
4964 6079 3.177884 TGGTGCAACAGGAGGCCT 61.178 61.111 3.86 3.86 39.98 5.19
4965 6080 2.985847 GTGGTGCAACAGGAGGCC 60.986 66.667 3.59 0.00 39.98 5.19
4966 6081 2.113986 AGTGGTGCAACAGGAGGC 59.886 61.111 3.59 0.00 39.98 4.70
4967 6082 1.601759 CCAGTGGTGCAACAGGAGG 60.602 63.158 3.59 3.19 39.98 4.30
4968 6083 1.149174 ACCAGTGGTGCAACAGGAG 59.851 57.895 15.86 5.21 39.98 3.69
4969 6084 3.330192 ACCAGTGGTGCAACAGGA 58.670 55.556 15.86 0.00 39.98 3.86
4981 6096 4.642429 GGAACAGAGATAAACACACCAGT 58.358 43.478 0.00 0.00 0.00 4.00
4982 6097 3.679980 CGGAACAGAGATAAACACACCAG 59.320 47.826 0.00 0.00 0.00 4.00
4983 6098 3.659786 CGGAACAGAGATAAACACACCA 58.340 45.455 0.00 0.00 0.00 4.17
4984 6099 2.415512 GCGGAACAGAGATAAACACACC 59.584 50.000 0.00 0.00 0.00 4.16
4985 6100 3.326747 AGCGGAACAGAGATAAACACAC 58.673 45.455 0.00 0.00 0.00 3.82
4986 6101 3.678056 AGCGGAACAGAGATAAACACA 57.322 42.857 0.00 0.00 0.00 3.72
4987 6102 5.451828 GTTAGCGGAACAGAGATAAACAC 57.548 43.478 0.21 0.00 38.02 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.