Multiple sequence alignment - TraesCS6B01G170400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G170400 chr6B 100.000 3443 0 0 1 3443 182597167 182593725 0.000000e+00 6359.0
1 TraesCS6B01G170400 chr6B 84.436 771 112 8 2676 3443 672119177 672118412 0.000000e+00 752.0
2 TraesCS6B01G170400 chr6B 95.982 224 9 0 176 399 15720762 15720539 7.020000e-97 364.0
3 TraesCS6B01G170400 chr6A 95.071 1684 47 14 841 2515 117005549 117003893 0.000000e+00 2617.0
4 TraesCS6B01G170400 chr6A 87.559 852 85 9 2612 3443 175995476 175994626 0.000000e+00 966.0
5 TraesCS6B01G170400 chr6A 87.028 424 28 3 2210 2608 117002344 117001923 1.460000e-123 453.0
6 TraesCS6B01G170400 chr6A 91.667 132 10 1 712 843 117005729 117005599 7.590000e-42 182.0
7 TraesCS6B01G170400 chr6A 74.405 336 75 11 1585 1915 187009793 187009464 2.160000e-27 134.0
8 TraesCS6B01G170400 chr6D 97.563 1518 35 1 998 2515 97930130 97928615 0.000000e+00 2597.0
9 TraesCS6B01G170400 chr6D 84.496 774 113 6 2673 3443 47969793 47970562 0.000000e+00 758.0
10 TraesCS6B01G170400 chr6D 88.283 367 24 8 481 839 97931431 97931076 4.110000e-114 422.0
11 TraesCS6B01G170400 chr6D 86.207 87 12 0 2514 2600 97928593 97928507 1.020000e-15 95.3
12 TraesCS6B01G170400 chr6D 87.879 66 3 1 397 462 97931491 97931431 4.770000e-09 73.1
13 TraesCS6B01G170400 chr2A 90.285 772 68 5 2673 3442 702571226 702571992 0.000000e+00 1003.0
14 TraesCS6B01G170400 chr2A 82.184 696 116 8 1238 1929 446998253 446998944 2.960000e-165 592.0
15 TraesCS6B01G170400 chrUn 88.990 772 83 2 2673 3443 233506372 233507142 0.000000e+00 953.0
16 TraesCS6B01G170400 chrUn 99.048 210 2 0 189 398 329570932 329570723 9.020000e-101 377.0
17 TraesCS6B01G170400 chrUn 98.857 175 2 0 1 175 431678006 431678180 2.580000e-81 313.0
18 TraesCS6B01G170400 chr4A 88.731 772 85 2 2673 3443 688314968 688314198 0.000000e+00 942.0
19 TraesCS6B01G170400 chr4A 88.745 773 83 4 2673 3443 688364521 688363751 0.000000e+00 942.0
20 TraesCS6B01G170400 chr4A 86.269 772 104 2 2673 3443 559070679 559071449 0.000000e+00 837.0
21 TraesCS6B01G170400 chr4A 98.315 178 3 0 1 178 645314732 645314555 2.580000e-81 313.0
22 TraesCS6B01G170400 chr4A 98.857 175 2 0 1 175 742470542 742470716 2.580000e-81 313.0
23 TraesCS6B01G170400 chr4A 98.857 175 2 0 1 175 742476028 742476202 2.580000e-81 313.0
24 TraesCS6B01G170400 chr4A 78.182 385 73 11 1307 1685 695251813 695251434 5.740000e-58 235.0
25 TraesCS6B01G170400 chr5D 85.473 771 111 1 2673 3443 49277226 49277995 0.000000e+00 802.0
26 TraesCS6B01G170400 chr5D 78.975 937 140 43 1020 1911 404188434 404189358 1.380000e-163 586.0
27 TraesCS6B01G170400 chr5D 82.251 693 105 15 1246 1929 403155326 403154643 1.780000e-162 582.0
28 TraesCS6B01G170400 chr5D 73.193 332 80 9 1585 1912 256718217 256718543 1.010000e-20 111.0
29 TraesCS6B01G170400 chr1D 81.662 698 120 8 1238 1931 220420409 220421102 1.070000e-159 573.0
30 TraesCS6B01G170400 chr1B 81.727 695 119 8 1241 1931 315390670 315389980 1.070000e-159 573.0
31 TraesCS6B01G170400 chr1B 96.847 222 7 0 175 396 46667221 46667442 4.200000e-99 372.0
32 TraesCS6B01G170400 chr5B 81.818 693 108 16 1246 1929 484644734 484644051 1.790000e-157 566.0
33 TraesCS6B01G170400 chr5A 81.647 692 111 13 1246 1929 510883980 510884663 8.340000e-156 560.0
34 TraesCS6B01G170400 chr5A 80.897 691 118 10 1246 1929 510015362 510014679 1.820000e-147 532.0
35 TraesCS6B01G170400 chr5A 98.857 175 2 0 1 175 700808289 700808463 2.580000e-81 313.0
36 TraesCS6B01G170400 chr3B 82.780 633 101 8 1293 1921 811505491 811504863 3.000000e-155 558.0
37 TraesCS6B01G170400 chr3B 96.847 222 5 1 177 396 706906296 706906075 1.510000e-98 370.0
38 TraesCS6B01G170400 chr3B 96.847 222 5 1 177 396 765958989 765958768 1.510000e-98 370.0
39 TraesCS6B01G170400 chr3B 96.396 222 8 0 175 396 120401352 120401131 1.950000e-97 366.0
40 TraesCS6B01G170400 chr3B 94.850 233 9 3 176 405 497102983 497103215 9.080000e-96 361.0
41 TraesCS6B01G170400 chr2D 81.178 696 114 14 1238 1929 336653916 336654598 8.400000e-151 544.0
42 TraesCS6B01G170400 chr3A 82.906 585 86 12 1281 1858 734258675 734259252 6.590000e-142 514.0
43 TraesCS6B01G170400 chr2B 96.847 222 7 0 175 396 115900735 115900514 4.200000e-99 372.0
44 TraesCS6B01G170400 chr2B 97.685 216 5 0 181 396 742020042 742019827 4.200000e-99 372.0
45 TraesCS6B01G170400 chr2B 98.876 178 2 0 1 178 741997373 741997196 5.540000e-83 318.0
46 TraesCS6B01G170400 chr4D 98.857 175 2 0 1 175 395227838 395228012 2.580000e-81 313.0
47 TraesCS6B01G170400 chr4D 98.857 175 2 0 1 175 395233284 395233458 2.580000e-81 313.0
48 TraesCS6B01G170400 chr4D 75.676 333 70 11 1585 1912 381547995 381548321 4.600000e-34 156.0
49 TraesCS6B01G170400 chr1A 98.315 178 3 0 1 178 15603603 15603426 2.580000e-81 313.0
50 TraesCS6B01G170400 chr4B 79.319 382 74 5 1307 1685 630628046 630628425 2.640000e-66 263.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G170400 chr6B 182593725 182597167 3442 True 6359.00 6359 100.000000 1 3443 1 chr6B.!!$R2 3442
1 TraesCS6B01G170400 chr6B 672118412 672119177 765 True 752.00 752 84.436000 2676 3443 1 chr6B.!!$R3 767
2 TraesCS6B01G170400 chr6A 117001923 117005729 3806 True 1084.00 2617 91.255333 712 2608 3 chr6A.!!$R3 1896
3 TraesCS6B01G170400 chr6A 175994626 175995476 850 True 966.00 966 87.559000 2612 3443 1 chr6A.!!$R1 831
4 TraesCS6B01G170400 chr6D 97928507 97931491 2984 True 796.85 2597 89.983000 397 2600 4 chr6D.!!$R1 2203
5 TraesCS6B01G170400 chr6D 47969793 47970562 769 False 758.00 758 84.496000 2673 3443 1 chr6D.!!$F1 770
6 TraesCS6B01G170400 chr2A 702571226 702571992 766 False 1003.00 1003 90.285000 2673 3442 1 chr2A.!!$F2 769
7 TraesCS6B01G170400 chr2A 446998253 446998944 691 False 592.00 592 82.184000 1238 1929 1 chr2A.!!$F1 691
8 TraesCS6B01G170400 chrUn 233506372 233507142 770 False 953.00 953 88.990000 2673 3443 1 chrUn.!!$F1 770
9 TraesCS6B01G170400 chr4A 688314198 688314968 770 True 942.00 942 88.731000 2673 3443 1 chr4A.!!$R2 770
10 TraesCS6B01G170400 chr4A 688363751 688364521 770 True 942.00 942 88.745000 2673 3443 1 chr4A.!!$R3 770
11 TraesCS6B01G170400 chr4A 559070679 559071449 770 False 837.00 837 86.269000 2673 3443 1 chr4A.!!$F1 770
12 TraesCS6B01G170400 chr5D 49277226 49277995 769 False 802.00 802 85.473000 2673 3443 1 chr5D.!!$F1 770
13 TraesCS6B01G170400 chr5D 404188434 404189358 924 False 586.00 586 78.975000 1020 1911 1 chr5D.!!$F3 891
14 TraesCS6B01G170400 chr5D 403154643 403155326 683 True 582.00 582 82.251000 1246 1929 1 chr5D.!!$R1 683
15 TraesCS6B01G170400 chr1D 220420409 220421102 693 False 573.00 573 81.662000 1238 1931 1 chr1D.!!$F1 693
16 TraesCS6B01G170400 chr1B 315389980 315390670 690 True 573.00 573 81.727000 1241 1931 1 chr1B.!!$R1 690
17 TraesCS6B01G170400 chr5B 484644051 484644734 683 True 566.00 566 81.818000 1246 1929 1 chr5B.!!$R1 683
18 TraesCS6B01G170400 chr5A 510883980 510884663 683 False 560.00 560 81.647000 1246 1929 1 chr5A.!!$F1 683
19 TraesCS6B01G170400 chr5A 510014679 510015362 683 True 532.00 532 80.897000 1246 1929 1 chr5A.!!$R1 683
20 TraesCS6B01G170400 chr3B 811504863 811505491 628 True 558.00 558 82.780000 1293 1921 1 chr3B.!!$R4 628
21 TraesCS6B01G170400 chr2D 336653916 336654598 682 False 544.00 544 81.178000 1238 1929 1 chr2D.!!$F1 691
22 TraesCS6B01G170400 chr3A 734258675 734259252 577 False 514.00 514 82.906000 1281 1858 1 chr3A.!!$F1 577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
255 256 0.107508 TAGCATGCAGAAGAGCCACC 60.108 55.0 21.98 0.00 0.00 4.61 F
897 1719 0.109412 AAAGATGCTGCTTGCGCTTC 60.109 50.0 9.73 13.03 46.63 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1068 1898 0.603707 CCTTCTTCGCCAGCTTCACA 60.604 55.0 0.0 0.0 0.0 3.58 R
2490 3353 0.110688 CGTTCACAATCACACTGGCG 60.111 55.0 0.0 0.0 0.0 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.771577 AAACGACTTGACCTCCTCAAT 57.228 42.857 0.00 0.00 38.26 2.57
21 22 2.751166 ACGACTTGACCTCCTCAATG 57.249 50.000 0.00 0.00 38.26 2.82
22 23 2.248248 ACGACTTGACCTCCTCAATGA 58.752 47.619 0.00 0.00 38.26 2.57
23 24 2.028930 ACGACTTGACCTCCTCAATGAC 60.029 50.000 0.00 0.00 38.26 3.06
24 25 2.232452 CGACTTGACCTCCTCAATGACT 59.768 50.000 0.00 0.00 38.26 3.41
25 26 3.306364 CGACTTGACCTCCTCAATGACTT 60.306 47.826 0.00 0.00 38.26 3.01
26 27 4.646572 GACTTGACCTCCTCAATGACTTT 58.353 43.478 0.00 0.00 38.26 2.66
27 28 4.392940 ACTTGACCTCCTCAATGACTTTG 58.607 43.478 0.00 0.00 38.26 2.77
28 29 4.103153 ACTTGACCTCCTCAATGACTTTGA 59.897 41.667 3.95 3.95 42.09 2.69
39 40 5.577835 TCAATGACTTTGAGGTTTGTTTCG 58.422 37.500 0.00 0.00 39.44 3.46
40 41 5.355630 TCAATGACTTTGAGGTTTGTTTCGA 59.644 36.000 0.00 0.00 39.44 3.71
41 42 5.828299 ATGACTTTGAGGTTTGTTTCGAA 57.172 34.783 0.00 0.00 0.00 3.71
42 43 5.828299 TGACTTTGAGGTTTGTTTCGAAT 57.172 34.783 0.00 0.00 0.00 3.34
43 44 6.928979 TGACTTTGAGGTTTGTTTCGAATA 57.071 33.333 0.00 0.00 0.00 1.75
44 45 7.504924 TGACTTTGAGGTTTGTTTCGAATAT 57.495 32.000 0.00 0.00 0.00 1.28
45 46 7.581476 TGACTTTGAGGTTTGTTTCGAATATC 58.419 34.615 0.00 0.00 0.00 1.63
46 47 7.227711 TGACTTTGAGGTTTGTTTCGAATATCA 59.772 33.333 0.00 0.00 0.00 2.15
47 48 7.584987 ACTTTGAGGTTTGTTTCGAATATCAG 58.415 34.615 0.00 0.00 0.00 2.90
48 49 7.228706 ACTTTGAGGTTTGTTTCGAATATCAGT 59.771 33.333 0.00 0.00 0.00 3.41
49 50 8.610248 TTTGAGGTTTGTTTCGAATATCAGTA 57.390 30.769 0.00 0.00 0.00 2.74
50 51 8.786826 TTGAGGTTTGTTTCGAATATCAGTAT 57.213 30.769 0.00 0.00 0.00 2.12
51 52 8.196802 TGAGGTTTGTTTCGAATATCAGTATG 57.803 34.615 0.00 0.00 37.54 2.39
52 53 7.822334 TGAGGTTTGTTTCGAATATCAGTATGT 59.178 33.333 0.00 0.00 37.40 2.29
53 54 8.197988 AGGTTTGTTTCGAATATCAGTATGTC 57.802 34.615 0.00 0.00 37.40 3.06
54 55 7.822334 AGGTTTGTTTCGAATATCAGTATGTCA 59.178 33.333 0.00 0.00 37.40 3.58
55 56 8.612619 GGTTTGTTTCGAATATCAGTATGTCAT 58.387 33.333 0.00 0.00 37.40 3.06
56 57 9.638300 GTTTGTTTCGAATATCAGTATGTCATC 57.362 33.333 0.00 0.00 37.40 2.92
57 58 8.940768 TTGTTTCGAATATCAGTATGTCATCA 57.059 30.769 0.00 0.00 37.40 3.07
58 59 8.940768 TGTTTCGAATATCAGTATGTCATCAA 57.059 30.769 0.00 0.00 37.40 2.57
59 60 8.817100 TGTTTCGAATATCAGTATGTCATCAAC 58.183 33.333 0.00 0.00 37.40 3.18
60 61 8.817100 GTTTCGAATATCAGTATGTCATCAACA 58.183 33.333 0.00 0.00 43.51 3.33
71 72 5.556355 ATGTCATCAACATACAAGCACAG 57.444 39.130 0.00 0.00 46.95 3.66
72 73 4.388485 TGTCATCAACATACAAGCACAGT 58.612 39.130 0.00 0.00 31.20 3.55
73 74 5.546526 TGTCATCAACATACAAGCACAGTA 58.453 37.500 0.00 0.00 31.20 2.74
74 75 6.172630 TGTCATCAACATACAAGCACAGTAT 58.827 36.000 0.00 0.00 31.20 2.12
75 76 7.327214 TGTCATCAACATACAAGCACAGTATA 58.673 34.615 0.00 0.00 31.20 1.47
76 77 7.821846 TGTCATCAACATACAAGCACAGTATAA 59.178 33.333 0.00 0.00 31.20 0.98
77 78 8.116753 GTCATCAACATACAAGCACAGTATAAC 58.883 37.037 0.00 0.00 31.32 1.89
78 79 8.040727 TCATCAACATACAAGCACAGTATAACT 58.959 33.333 0.00 0.00 31.32 2.24
79 80 7.827819 TCAACATACAAGCACAGTATAACTC 57.172 36.000 0.00 0.00 31.32 3.01
80 81 6.816640 TCAACATACAAGCACAGTATAACTCC 59.183 38.462 0.00 0.00 31.32 3.85
81 82 6.546428 ACATACAAGCACAGTATAACTCCT 57.454 37.500 0.00 0.00 31.32 3.69
82 83 6.947464 ACATACAAGCACAGTATAACTCCTT 58.053 36.000 0.00 0.00 31.32 3.36
83 84 7.042335 ACATACAAGCACAGTATAACTCCTTC 58.958 38.462 0.00 0.00 31.32 3.46
84 85 4.495422 ACAAGCACAGTATAACTCCTTCG 58.505 43.478 0.00 0.00 0.00 3.79
85 86 3.166489 AGCACAGTATAACTCCTTCGC 57.834 47.619 0.00 0.00 0.00 4.70
86 87 2.159085 AGCACAGTATAACTCCTTCGCC 60.159 50.000 0.00 0.00 0.00 5.54
87 88 2.822764 CACAGTATAACTCCTTCGCCC 58.177 52.381 0.00 0.00 0.00 6.13
88 89 1.761198 ACAGTATAACTCCTTCGCCCC 59.239 52.381 0.00 0.00 0.00 5.80
89 90 1.070289 CAGTATAACTCCTTCGCCCCC 59.930 57.143 0.00 0.00 0.00 5.40
90 91 1.125633 GTATAACTCCTTCGCCCCCA 58.874 55.000 0.00 0.00 0.00 4.96
91 92 1.125633 TATAACTCCTTCGCCCCCAC 58.874 55.000 0.00 0.00 0.00 4.61
92 93 1.632965 ATAACTCCTTCGCCCCCACC 61.633 60.000 0.00 0.00 0.00 4.61
93 94 4.908479 TATAACTCCTTCGCCCCCACCA 62.908 54.545 0.00 0.00 0.00 4.17
94 95 3.411517 CTCCTTCGCCCCCACCAT 61.412 66.667 0.00 0.00 0.00 3.55
95 96 3.704231 CTCCTTCGCCCCCACCATG 62.704 68.421 0.00 0.00 0.00 3.66
96 97 4.820744 CCTTCGCCCCCACCATGG 62.821 72.222 11.19 11.19 37.25 3.66
101 102 3.884774 GCCCCCACCATGGCGATA 61.885 66.667 13.04 0.00 38.00 2.92
102 103 2.431683 CCCCCACCATGGCGATAG 59.568 66.667 13.04 0.00 35.79 2.08
103 104 2.452064 CCCCCACCATGGCGATAGT 61.452 63.158 13.04 0.00 35.79 2.12
104 105 1.125093 CCCCCACCATGGCGATAGTA 61.125 60.000 13.04 0.00 35.79 1.82
105 106 0.984230 CCCCACCATGGCGATAGTAT 59.016 55.000 13.04 0.00 35.79 2.12
106 107 2.184533 CCCCACCATGGCGATAGTATA 58.815 52.381 13.04 0.00 35.79 1.47
107 108 2.093658 CCCCACCATGGCGATAGTATAC 60.094 54.545 13.04 0.00 35.79 1.47
108 109 2.565391 CCCACCATGGCGATAGTATACA 59.435 50.000 13.04 0.00 35.79 2.29
109 110 3.585862 CCACCATGGCGATAGTATACAC 58.414 50.000 13.04 0.00 39.35 2.90
110 111 3.006430 CCACCATGGCGATAGTATACACA 59.994 47.826 13.04 0.00 39.35 3.72
111 112 4.322725 CCACCATGGCGATAGTATACACAT 60.323 45.833 13.04 0.00 39.35 3.21
112 113 5.237815 CACCATGGCGATAGTATACACATT 58.762 41.667 13.04 0.00 39.35 2.71
113 114 5.700832 CACCATGGCGATAGTATACACATTT 59.299 40.000 13.04 0.00 39.35 2.32
114 115 5.700832 ACCATGGCGATAGTATACACATTTG 59.299 40.000 13.04 0.00 39.35 2.32
115 116 5.700832 CCATGGCGATAGTATACACATTTGT 59.299 40.000 0.00 0.00 37.97 2.83
116 117 6.128553 CCATGGCGATAGTATACACATTTGTC 60.129 42.308 0.00 0.00 36.18 3.18
117 118 5.908341 TGGCGATAGTATACACATTTGTCA 58.092 37.500 5.50 0.81 36.18 3.58
118 119 5.983118 TGGCGATAGTATACACATTTGTCAG 59.017 40.000 5.50 0.00 36.18 3.51
119 120 5.107453 GGCGATAGTATACACATTTGTCAGC 60.107 44.000 5.50 1.20 36.18 4.26
120 121 5.107453 GCGATAGTATACACATTTGTCAGCC 60.107 44.000 5.50 0.00 36.18 4.85
121 122 6.216569 CGATAGTATACACATTTGTCAGCCT 58.783 40.000 5.50 0.00 37.15 4.58
122 123 6.363626 CGATAGTATACACATTTGTCAGCCTC 59.636 42.308 5.50 0.00 37.15 4.70
123 124 5.420725 AGTATACACATTTGTCAGCCTCA 57.579 39.130 5.50 0.00 37.15 3.86
124 125 5.994250 AGTATACACATTTGTCAGCCTCAT 58.006 37.500 5.50 0.00 37.15 2.90
125 126 6.418101 AGTATACACATTTGTCAGCCTCATT 58.582 36.000 5.50 0.00 37.15 2.57
126 127 7.564793 AGTATACACATTTGTCAGCCTCATTA 58.435 34.615 5.50 0.00 37.15 1.90
127 128 8.046708 AGTATACACATTTGTCAGCCTCATTAA 58.953 33.333 5.50 0.00 37.15 1.40
128 129 5.376854 ACACATTTGTCAGCCTCATTAAC 57.623 39.130 0.00 0.00 0.00 2.01
129 130 4.826733 ACACATTTGTCAGCCTCATTAACA 59.173 37.500 0.00 0.00 0.00 2.41
130 131 5.301551 ACACATTTGTCAGCCTCATTAACAA 59.698 36.000 0.00 0.00 0.00 2.83
131 132 5.630680 CACATTTGTCAGCCTCATTAACAAC 59.369 40.000 0.00 0.00 30.14 3.32
132 133 4.481930 TTTGTCAGCCTCATTAACAACG 57.518 40.909 0.00 0.00 30.14 4.10
133 134 3.394674 TGTCAGCCTCATTAACAACGA 57.605 42.857 0.00 0.00 0.00 3.85
134 135 3.734463 TGTCAGCCTCATTAACAACGAA 58.266 40.909 0.00 0.00 0.00 3.85
135 136 4.130857 TGTCAGCCTCATTAACAACGAAA 58.869 39.130 0.00 0.00 0.00 3.46
136 137 4.024387 TGTCAGCCTCATTAACAACGAAAC 60.024 41.667 0.00 0.00 0.00 2.78
137 138 3.500680 TCAGCCTCATTAACAACGAAACC 59.499 43.478 0.00 0.00 0.00 3.27
138 139 3.252215 CAGCCTCATTAACAACGAAACCA 59.748 43.478 0.00 0.00 0.00 3.67
139 140 3.886505 AGCCTCATTAACAACGAAACCAA 59.113 39.130 0.00 0.00 0.00 3.67
140 141 3.978855 GCCTCATTAACAACGAAACCAAC 59.021 43.478 0.00 0.00 0.00 3.77
141 142 4.498345 GCCTCATTAACAACGAAACCAACA 60.498 41.667 0.00 0.00 0.00 3.33
142 143 5.212194 CCTCATTAACAACGAAACCAACAG 58.788 41.667 0.00 0.00 0.00 3.16
143 144 5.008217 CCTCATTAACAACGAAACCAACAGA 59.992 40.000 0.00 0.00 0.00 3.41
144 145 6.293955 CCTCATTAACAACGAAACCAACAGAT 60.294 38.462 0.00 0.00 0.00 2.90
145 146 6.434596 TCATTAACAACGAAACCAACAGATG 58.565 36.000 0.00 0.00 0.00 2.90
146 147 5.821516 TTAACAACGAAACCAACAGATGT 57.178 34.783 0.00 0.00 0.00 3.06
147 148 3.963383 ACAACGAAACCAACAGATGTC 57.037 42.857 0.00 0.00 0.00 3.06
148 149 3.275143 ACAACGAAACCAACAGATGTCA 58.725 40.909 0.00 0.00 0.00 3.58
149 150 3.312421 ACAACGAAACCAACAGATGTCAG 59.688 43.478 0.00 0.00 0.00 3.51
150 151 3.469008 ACGAAACCAACAGATGTCAGA 57.531 42.857 0.00 0.00 0.00 3.27
151 152 3.393800 ACGAAACCAACAGATGTCAGAG 58.606 45.455 0.00 0.00 0.00 3.35
152 153 3.181465 ACGAAACCAACAGATGTCAGAGT 60.181 43.478 0.00 0.00 0.00 3.24
153 154 3.809832 CGAAACCAACAGATGTCAGAGTT 59.190 43.478 0.00 0.00 0.00 3.01
154 155 4.319046 CGAAACCAACAGATGTCAGAGTTG 60.319 45.833 0.00 0.00 40.63 3.16
155 156 3.845781 ACCAACAGATGTCAGAGTTGT 57.154 42.857 11.53 0.00 39.63 3.32
156 157 4.955811 ACCAACAGATGTCAGAGTTGTA 57.044 40.909 11.53 0.00 39.63 2.41
157 158 5.489792 ACCAACAGATGTCAGAGTTGTAT 57.510 39.130 11.53 1.16 39.63 2.29
158 159 5.869579 ACCAACAGATGTCAGAGTTGTATT 58.130 37.500 11.53 0.00 39.63 1.89
159 160 5.702670 ACCAACAGATGTCAGAGTTGTATTG 59.297 40.000 11.53 0.00 39.63 1.90
160 161 5.934043 CCAACAGATGTCAGAGTTGTATTGA 59.066 40.000 11.53 0.00 39.63 2.57
161 162 6.427853 CCAACAGATGTCAGAGTTGTATTGAA 59.572 38.462 11.53 0.00 39.63 2.69
162 163 7.293745 CAACAGATGTCAGAGTTGTATTGAAC 58.706 38.462 0.00 0.00 37.25 3.18
163 164 6.763355 ACAGATGTCAGAGTTGTATTGAACT 58.237 36.000 0.00 0.00 38.94 3.01
164 165 7.220030 ACAGATGTCAGAGTTGTATTGAACTT 58.780 34.615 0.00 0.00 36.27 2.66
165 166 8.367911 ACAGATGTCAGAGTTGTATTGAACTTA 58.632 33.333 0.00 0.00 36.27 2.24
166 167 9.376075 CAGATGTCAGAGTTGTATTGAACTTAT 57.624 33.333 0.00 0.00 36.27 1.73
167 168 9.593134 AGATGTCAGAGTTGTATTGAACTTATC 57.407 33.333 0.00 0.00 36.27 1.75
168 169 9.371136 GATGTCAGAGTTGTATTGAACTTATCA 57.629 33.333 0.00 0.00 36.27 2.15
169 170 9.896645 ATGTCAGAGTTGTATTGAACTTATCAT 57.103 29.630 0.00 0.00 38.03 2.45
170 171 9.154847 TGTCAGAGTTGTATTGAACTTATCATG 57.845 33.333 0.00 0.00 38.03 3.07
171 172 8.119226 GTCAGAGTTGTATTGAACTTATCATGC 58.881 37.037 0.00 0.00 38.03 4.06
172 173 7.280876 TCAGAGTTGTATTGAACTTATCATGCC 59.719 37.037 0.00 0.00 38.03 4.40
173 174 7.066163 CAGAGTTGTATTGAACTTATCATGCCA 59.934 37.037 0.00 0.00 38.03 4.92
174 175 7.776969 AGAGTTGTATTGAACTTATCATGCCAT 59.223 33.333 0.00 0.00 38.03 4.40
175 176 7.934457 AGTTGTATTGAACTTATCATGCCATC 58.066 34.615 0.00 0.00 38.03 3.51
176 177 6.544038 TGTATTGAACTTATCATGCCATCG 57.456 37.500 0.00 0.00 38.03 3.84
177 178 3.969117 TTGAACTTATCATGCCATCGC 57.031 42.857 0.00 0.00 38.03 4.58
178 179 1.866601 TGAACTTATCATGCCATCGCG 59.133 47.619 0.00 0.00 32.68 5.87
179 180 1.867233 GAACTTATCATGCCATCGCGT 59.133 47.619 5.77 0.00 38.08 6.01
180 181 1.502231 ACTTATCATGCCATCGCGTC 58.498 50.000 5.77 0.00 38.08 5.19
181 182 0.436150 CTTATCATGCCATCGCGTCG 59.564 55.000 5.77 0.00 38.08 5.12
182 183 0.249280 TTATCATGCCATCGCGTCGT 60.249 50.000 5.77 0.00 38.08 4.34
183 184 0.939106 TATCATGCCATCGCGTCGTG 60.939 55.000 5.77 0.00 38.08 4.35
184 185 2.627510 ATCATGCCATCGCGTCGTGA 62.628 55.000 11.45 11.45 38.08 4.35
185 186 2.885644 ATGCCATCGCGTCGTGAC 60.886 61.111 11.27 0.00 38.08 3.67
221 222 4.882396 GCGCGAGGGCCTCTTCTC 62.882 72.222 29.81 13.49 35.02 2.87
222 223 3.144193 CGCGAGGGCCTCTTCTCT 61.144 66.667 29.81 0.00 35.02 3.10
223 224 2.716017 CGCGAGGGCCTCTTCTCTT 61.716 63.158 29.81 0.00 35.02 2.85
224 225 1.142965 GCGAGGGCCTCTTCTCTTC 59.857 63.158 29.81 3.42 0.00 2.87
225 226 1.326951 GCGAGGGCCTCTTCTCTTCT 61.327 60.000 29.81 0.00 0.00 2.85
226 227 0.744281 CGAGGGCCTCTTCTCTTCTC 59.256 60.000 29.81 1.86 0.00 2.87
227 228 1.859302 GAGGGCCTCTTCTCTTCTCA 58.141 55.000 26.44 0.00 0.00 3.27
228 229 2.183679 GAGGGCCTCTTCTCTTCTCAA 58.816 52.381 26.44 0.00 0.00 3.02
229 230 2.168313 GAGGGCCTCTTCTCTTCTCAAG 59.832 54.545 26.44 0.00 0.00 3.02
230 231 1.406751 GGGCCTCTTCTCTTCTCAAGC 60.407 57.143 0.84 0.00 0.00 4.01
231 232 1.554617 GGCCTCTTCTCTTCTCAAGCT 59.445 52.381 0.00 0.00 0.00 3.74
232 233 2.418609 GGCCTCTTCTCTTCTCAAGCTC 60.419 54.545 0.00 0.00 0.00 4.09
233 234 2.418609 GCCTCTTCTCTTCTCAAGCTCC 60.419 54.545 0.00 0.00 0.00 4.70
234 235 2.830923 CCTCTTCTCTTCTCAAGCTCCA 59.169 50.000 0.00 0.00 0.00 3.86
235 236 3.260380 CCTCTTCTCTTCTCAAGCTCCAA 59.740 47.826 0.00 0.00 0.00 3.53
236 237 4.080975 CCTCTTCTCTTCTCAAGCTCCAAT 60.081 45.833 0.00 0.00 0.00 3.16
237 238 5.128499 CCTCTTCTCTTCTCAAGCTCCAATA 59.872 44.000 0.00 0.00 0.00 1.90
238 239 6.219417 TCTTCTCTTCTCAAGCTCCAATAG 57.781 41.667 0.00 0.00 0.00 1.73
251 252 2.548904 CTCCAATAGCATGCAGAAGAGC 59.451 50.000 21.98 0.00 0.00 4.09
252 253 1.607628 CCAATAGCATGCAGAAGAGCC 59.392 52.381 21.98 0.00 0.00 4.70
253 254 2.294979 CAATAGCATGCAGAAGAGCCA 58.705 47.619 21.98 0.00 0.00 4.75
254 255 1.964552 ATAGCATGCAGAAGAGCCAC 58.035 50.000 21.98 0.00 0.00 5.01
255 256 0.107508 TAGCATGCAGAAGAGCCACC 60.108 55.000 21.98 0.00 0.00 4.61
256 257 2.413142 GCATGCAGAAGAGCCACCC 61.413 63.158 14.21 0.00 0.00 4.61
257 258 1.302285 CATGCAGAAGAGCCACCCT 59.698 57.895 0.00 0.00 0.00 4.34
258 259 0.323178 CATGCAGAAGAGCCACCCTT 60.323 55.000 0.00 0.00 0.00 3.95
259 260 1.065199 CATGCAGAAGAGCCACCCTTA 60.065 52.381 0.00 0.00 0.00 2.69
260 261 1.289160 TGCAGAAGAGCCACCCTTAT 58.711 50.000 0.00 0.00 0.00 1.73
261 262 2.477245 TGCAGAAGAGCCACCCTTATA 58.523 47.619 0.00 0.00 0.00 0.98
262 263 2.843730 TGCAGAAGAGCCACCCTTATAA 59.156 45.455 0.00 0.00 0.00 0.98
263 264 3.265737 TGCAGAAGAGCCACCCTTATAAA 59.734 43.478 0.00 0.00 0.00 1.40
264 265 3.628032 GCAGAAGAGCCACCCTTATAAAC 59.372 47.826 0.00 0.00 0.00 2.01
265 266 4.200092 CAGAAGAGCCACCCTTATAAACC 58.800 47.826 0.00 0.00 0.00 3.27
266 267 3.850173 AGAAGAGCCACCCTTATAAACCA 59.150 43.478 0.00 0.00 0.00 3.67
267 268 3.646736 AGAGCCACCCTTATAAACCAC 57.353 47.619 0.00 0.00 0.00 4.16
268 269 3.190439 AGAGCCACCCTTATAAACCACT 58.810 45.455 0.00 0.00 0.00 4.00
269 270 3.200165 AGAGCCACCCTTATAAACCACTC 59.800 47.826 0.00 0.00 0.00 3.51
270 271 2.241430 AGCCACCCTTATAAACCACTCC 59.759 50.000 0.00 0.00 0.00 3.85
271 272 2.025699 GCCACCCTTATAAACCACTCCA 60.026 50.000 0.00 0.00 0.00 3.86
272 273 3.562609 GCCACCCTTATAAACCACTCCAA 60.563 47.826 0.00 0.00 0.00 3.53
273 274 4.014406 CCACCCTTATAAACCACTCCAAC 58.986 47.826 0.00 0.00 0.00 3.77
274 275 4.263771 CCACCCTTATAAACCACTCCAACT 60.264 45.833 0.00 0.00 0.00 3.16
275 276 5.321927 CACCCTTATAAACCACTCCAACTT 58.678 41.667 0.00 0.00 0.00 2.66
276 277 5.773176 CACCCTTATAAACCACTCCAACTTT 59.227 40.000 0.00 0.00 0.00 2.66
277 278 6.008331 ACCCTTATAAACCACTCCAACTTTC 58.992 40.000 0.00 0.00 0.00 2.62
278 279 5.417894 CCCTTATAAACCACTCCAACTTTCC 59.582 44.000 0.00 0.00 0.00 3.13
279 280 6.246163 CCTTATAAACCACTCCAACTTTCCT 58.754 40.000 0.00 0.00 0.00 3.36
280 281 6.719829 CCTTATAAACCACTCCAACTTTCCTT 59.280 38.462 0.00 0.00 0.00 3.36
281 282 7.094334 CCTTATAAACCACTCCAACTTTCCTTC 60.094 40.741 0.00 0.00 0.00 3.46
282 283 2.658807 ACCACTCCAACTTTCCTTCC 57.341 50.000 0.00 0.00 0.00 3.46
283 284 1.850345 ACCACTCCAACTTTCCTTCCA 59.150 47.619 0.00 0.00 0.00 3.53
284 285 2.230660 CCACTCCAACTTTCCTTCCAC 58.769 52.381 0.00 0.00 0.00 4.02
285 286 2.158608 CCACTCCAACTTTCCTTCCACT 60.159 50.000 0.00 0.00 0.00 4.00
286 287 3.072476 CCACTCCAACTTTCCTTCCACTA 59.928 47.826 0.00 0.00 0.00 2.74
287 288 4.319177 CACTCCAACTTTCCTTCCACTAG 58.681 47.826 0.00 0.00 0.00 2.57
288 289 3.244596 ACTCCAACTTTCCTTCCACTAGC 60.245 47.826 0.00 0.00 0.00 3.42
289 290 2.708861 TCCAACTTTCCTTCCACTAGCA 59.291 45.455 0.00 0.00 0.00 3.49
290 291 3.330701 TCCAACTTTCCTTCCACTAGCAT 59.669 43.478 0.00 0.00 0.00 3.79
291 292 3.441572 CCAACTTTCCTTCCACTAGCATG 59.558 47.826 0.00 0.00 0.00 4.06
292 293 3.356529 ACTTTCCTTCCACTAGCATGG 57.643 47.619 0.00 0.00 41.57 3.66
293 294 2.644798 ACTTTCCTTCCACTAGCATGGT 59.355 45.455 1.62 1.62 40.95 3.55
302 303 3.627395 CACTAGCATGGTGGGACTAAA 57.373 47.619 13.14 0.00 44.63 1.85
303 304 3.270877 CACTAGCATGGTGGGACTAAAC 58.729 50.000 13.14 0.00 44.63 2.01
304 305 3.055094 CACTAGCATGGTGGGACTAAACT 60.055 47.826 13.14 0.00 44.63 2.66
305 306 3.587506 ACTAGCATGGTGGGACTAAACTT 59.412 43.478 13.14 0.00 0.00 2.66
306 307 3.073274 AGCATGGTGGGACTAAACTTC 57.927 47.619 0.00 0.00 0.00 3.01
307 308 2.092323 GCATGGTGGGACTAAACTTCC 58.908 52.381 0.00 0.00 0.00 3.46
314 315 2.195741 GGACTAAACTTCCCACCACC 57.804 55.000 0.00 0.00 0.00 4.61
315 316 1.703513 GGACTAAACTTCCCACCACCT 59.296 52.381 0.00 0.00 0.00 4.00
316 317 2.107726 GGACTAAACTTCCCACCACCTT 59.892 50.000 0.00 0.00 0.00 3.50
317 318 3.146847 GACTAAACTTCCCACCACCTTG 58.853 50.000 0.00 0.00 0.00 3.61
318 319 2.512476 ACTAAACTTCCCACCACCTTGT 59.488 45.455 0.00 0.00 0.00 3.16
319 320 2.067365 AAACTTCCCACCACCTTGTC 57.933 50.000 0.00 0.00 0.00 3.18
320 321 0.923358 AACTTCCCACCACCTTGTCA 59.077 50.000 0.00 0.00 0.00 3.58
321 322 1.149101 ACTTCCCACCACCTTGTCAT 58.851 50.000 0.00 0.00 0.00 3.06
322 323 1.202927 ACTTCCCACCACCTTGTCATG 60.203 52.381 0.00 0.00 0.00 3.07
323 324 0.539438 TTCCCACCACCTTGTCATGC 60.539 55.000 0.00 0.00 0.00 4.06
324 325 1.978617 CCCACCACCTTGTCATGCC 60.979 63.158 0.00 0.00 0.00 4.40
325 326 1.228521 CCACCACCTTGTCATGCCA 60.229 57.895 0.00 0.00 0.00 4.92
326 327 1.526575 CCACCACCTTGTCATGCCAC 61.527 60.000 0.00 0.00 0.00 5.01
327 328 1.228552 ACCACCTTGTCATGCCACC 60.229 57.895 0.00 0.00 0.00 4.61
328 329 1.075482 CCACCTTGTCATGCCACCT 59.925 57.895 0.00 0.00 0.00 4.00
329 330 0.327924 CCACCTTGTCATGCCACCTA 59.672 55.000 0.00 0.00 0.00 3.08
330 331 1.453155 CACCTTGTCATGCCACCTAC 58.547 55.000 0.00 0.00 0.00 3.18
331 332 1.064003 ACCTTGTCATGCCACCTACA 58.936 50.000 0.00 0.00 0.00 2.74
332 333 1.635487 ACCTTGTCATGCCACCTACAT 59.365 47.619 0.00 0.00 0.00 2.29
333 334 2.019249 CCTTGTCATGCCACCTACATG 58.981 52.381 0.00 0.00 45.08 3.21
334 335 2.019249 CTTGTCATGCCACCTACATGG 58.981 52.381 0.00 0.00 44.09 3.66
335 336 0.255604 TGTCATGCCACCTACATGGG 59.744 55.000 0.00 0.00 44.09 4.00
339 340 3.420482 GCCACCTACATGGGCCCT 61.420 66.667 25.70 5.02 41.90 5.19
340 341 2.996330 GCCACCTACATGGGCCCTT 61.996 63.158 25.70 15.22 41.90 3.95
341 342 1.641552 GCCACCTACATGGGCCCTTA 61.642 60.000 25.70 10.70 41.90 2.69
342 343 0.474184 CCACCTACATGGGCCCTTAG 59.526 60.000 25.70 19.34 41.11 2.18
343 344 1.507140 CACCTACATGGGCCCTTAGA 58.493 55.000 25.70 1.52 41.11 2.10
344 345 1.417890 CACCTACATGGGCCCTTAGAG 59.582 57.143 25.70 16.12 41.11 2.43
345 346 1.294068 ACCTACATGGGCCCTTAGAGA 59.706 52.381 25.70 0.07 41.11 3.10
346 347 2.089925 ACCTACATGGGCCCTTAGAGAT 60.090 50.000 25.70 3.22 41.11 2.75
347 348 2.569404 CCTACATGGGCCCTTAGAGATC 59.431 54.545 25.70 0.00 0.00 2.75
348 349 2.196742 ACATGGGCCCTTAGAGATCA 57.803 50.000 25.70 0.00 0.00 2.92
349 350 2.492025 ACATGGGCCCTTAGAGATCAA 58.508 47.619 25.70 0.00 0.00 2.57
350 351 2.852449 ACATGGGCCCTTAGAGATCAAA 59.148 45.455 25.70 0.00 0.00 2.69
351 352 3.464833 ACATGGGCCCTTAGAGATCAAAT 59.535 43.478 25.70 0.00 0.00 2.32
352 353 3.864789 TGGGCCCTTAGAGATCAAATC 57.135 47.619 25.70 0.00 0.00 2.17
353 354 3.397527 TGGGCCCTTAGAGATCAAATCT 58.602 45.455 25.70 0.00 43.70 2.40
354 355 3.137176 TGGGCCCTTAGAGATCAAATCTG 59.863 47.826 25.70 0.00 40.38 2.90
355 356 3.392616 GGGCCCTTAGAGATCAAATCTGA 59.607 47.826 17.04 0.00 40.38 3.27
356 357 4.141390 GGGCCCTTAGAGATCAAATCTGAA 60.141 45.833 17.04 0.00 40.38 3.02
357 358 5.440610 GGCCCTTAGAGATCAAATCTGAAA 58.559 41.667 0.00 0.00 40.38 2.69
358 359 6.067350 GGCCCTTAGAGATCAAATCTGAAAT 58.933 40.000 0.00 0.00 40.38 2.17
359 360 6.548993 GGCCCTTAGAGATCAAATCTGAAATT 59.451 38.462 0.00 0.00 40.38 1.82
360 361 7.721399 GGCCCTTAGAGATCAAATCTGAAATTA 59.279 37.037 0.00 0.00 40.38 1.40
361 362 9.294614 GCCCTTAGAGATCAAATCTGAAATTAT 57.705 33.333 0.00 0.00 40.38 1.28
377 378 8.267894 TCTGAAATTATTATATGGGCTCTAGGC 58.732 37.037 0.00 0.00 40.90 3.93
387 388 2.521103 GCTCTAGGCCCATCTCACA 58.479 57.895 0.00 0.00 34.27 3.58
388 389 1.055040 GCTCTAGGCCCATCTCACAT 58.945 55.000 0.00 0.00 34.27 3.21
389 390 1.419387 GCTCTAGGCCCATCTCACATT 59.581 52.381 0.00 0.00 34.27 2.71
390 391 2.158696 GCTCTAGGCCCATCTCACATTT 60.159 50.000 0.00 0.00 34.27 2.32
391 392 3.737850 CTCTAGGCCCATCTCACATTTC 58.262 50.000 0.00 0.00 0.00 2.17
392 393 3.114606 TCTAGGCCCATCTCACATTTCA 58.885 45.455 0.00 0.00 0.00 2.69
393 394 2.905415 AGGCCCATCTCACATTTCAA 57.095 45.000 0.00 0.00 0.00 2.69
394 395 2.450476 AGGCCCATCTCACATTTCAAC 58.550 47.619 0.00 0.00 0.00 3.18
395 396 2.170166 GGCCCATCTCACATTTCAACA 58.830 47.619 0.00 0.00 0.00 3.33
400 401 4.703575 CCCATCTCACATTTCAACAGATGT 59.296 41.667 6.51 0.00 39.15 3.06
428 429 3.848272 TCAATTCGGTTGATTCCAAGC 57.152 42.857 0.00 0.00 41.79 4.01
462 463 3.365868 CCCGATGATTTTTGCTTCGAACA 60.366 43.478 0.00 0.00 35.66 3.18
463 464 4.414852 CCGATGATTTTTGCTTCGAACAT 58.585 39.130 0.00 0.00 35.66 2.71
464 465 4.858692 CCGATGATTTTTGCTTCGAACATT 59.141 37.500 0.00 0.00 35.66 2.71
465 466 5.003778 CCGATGATTTTTGCTTCGAACATTC 59.996 40.000 0.00 0.00 35.66 2.67
466 467 5.003778 CGATGATTTTTGCTTCGAACATTCC 59.996 40.000 0.00 0.00 35.66 3.01
467 468 5.193663 TGATTTTTGCTTCGAACATTCCA 57.806 34.783 0.00 0.00 0.00 3.53
468 469 5.595885 TGATTTTTGCTTCGAACATTCCAA 58.404 33.333 0.00 0.00 0.00 3.53
469 470 5.691305 TGATTTTTGCTTCGAACATTCCAAG 59.309 36.000 0.00 0.00 0.00 3.61
470 471 2.704725 TTGCTTCGAACATTCCAAGC 57.295 45.000 14.72 14.72 46.94 4.01
471 472 3.296516 GCTTCGAACATTCCAAGCG 57.703 52.632 7.98 0.00 40.53 4.68
472 473 0.517316 GCTTCGAACATTCCAAGCGT 59.483 50.000 7.98 0.00 40.53 5.07
473 474 1.730064 GCTTCGAACATTCCAAGCGTA 59.270 47.619 7.98 0.00 40.53 4.42
474 475 2.351726 GCTTCGAACATTCCAAGCGTAT 59.648 45.455 7.98 0.00 40.53 3.06
475 476 3.181510 GCTTCGAACATTCCAAGCGTATT 60.182 43.478 7.98 0.00 40.53 1.89
476 477 4.671766 GCTTCGAACATTCCAAGCGTATTT 60.672 41.667 7.98 0.00 40.53 1.40
477 478 4.593597 TCGAACATTCCAAGCGTATTTC 57.406 40.909 0.00 0.00 0.00 2.17
478 479 3.997681 TCGAACATTCCAAGCGTATTTCA 59.002 39.130 0.00 0.00 0.00 2.69
479 480 4.092821 TCGAACATTCCAAGCGTATTTCAG 59.907 41.667 0.00 0.00 0.00 3.02
480 481 3.764885 ACATTCCAAGCGTATTTCAGC 57.235 42.857 0.00 0.00 0.00 4.26
504 506 3.196254 ACAATAAAAGCCAGGCCAATGAG 59.804 43.478 8.22 0.00 0.00 2.90
561 563 1.063616 GATGGATCGACGTCAACGAGA 59.936 52.381 17.16 4.35 42.81 4.04
590 592 2.160065 CGTATAAAAATCGTAGCGCCCG 60.160 50.000 2.29 7.37 0.00 6.13
591 593 1.944032 ATAAAAATCGTAGCGCCCGT 58.056 45.000 15.50 2.43 0.00 5.28
635 643 0.887247 CAATGCCACGGAAATGGACA 59.113 50.000 0.00 0.00 43.02 4.02
641 649 3.013921 GCCACGGAAATGGACAAGAATA 58.986 45.455 0.00 0.00 43.02 1.75
642 650 3.632145 GCCACGGAAATGGACAAGAATAT 59.368 43.478 0.00 0.00 43.02 1.28
643 651 4.819630 GCCACGGAAATGGACAAGAATATA 59.180 41.667 0.00 0.00 43.02 0.86
645 653 6.568462 GCCACGGAAATGGACAAGAATATATG 60.568 42.308 0.00 0.00 43.02 1.78
646 654 6.710295 CCACGGAAATGGACAAGAATATATGA 59.290 38.462 0.00 0.00 43.02 2.15
676 685 0.176680 TCGAGAAGAATGCTGGCCTC 59.823 55.000 3.32 0.00 0.00 4.70
686 695 2.125512 CTGGCCTCGAACTTCCGG 60.126 66.667 3.32 0.00 0.00 5.14
709 718 2.754946 ACGACCAACACACGGATAAT 57.245 45.000 0.00 0.00 0.00 1.28
710 719 3.872511 ACGACCAACACACGGATAATA 57.127 42.857 0.00 0.00 0.00 0.98
808 817 2.827652 AGCGGAATTAGCTAAGAGCAC 58.172 47.619 12.54 1.76 45.56 4.40
829 838 0.378257 CGAGCAATGACCGGGAAATG 59.622 55.000 6.32 0.14 0.00 2.32
839 848 2.830370 GGGAAATGCAGGGCGAGG 60.830 66.667 0.00 0.00 0.00 4.63
844 1659 1.132453 GAAATGCAGGGCGAGGTTTAC 59.868 52.381 0.00 0.00 0.00 2.01
857 1672 0.312416 GGTTTACGTGGTTGCATGCA 59.688 50.000 18.46 18.46 0.00 3.96
880 1700 6.430925 GCATTGACCAGCCTCACATATATAAA 59.569 38.462 0.00 0.00 0.00 1.40
881 1701 7.361542 GCATTGACCAGCCTCACATATATAAAG 60.362 40.741 0.00 0.00 0.00 1.85
882 1702 6.994421 TGACCAGCCTCACATATATAAAGA 57.006 37.500 0.00 0.00 0.00 2.52
889 1711 5.879223 GCCTCACATATATAAAGATGCTGCT 59.121 40.000 0.00 0.00 0.00 4.24
897 1719 0.109412 AAAGATGCTGCTTGCGCTTC 60.109 50.000 9.73 13.03 46.63 3.86
916 1745 5.107182 CGCTTCTTGTCATCATATCCATGTC 60.107 44.000 0.00 0.00 33.57 3.06
924 1753 2.351394 TCATATCCATGTCCCTGGCAT 58.649 47.619 0.00 0.00 36.16 4.40
938 1767 0.463204 TGGCATCAGTCTAGCTCAGC 59.537 55.000 0.00 0.00 0.00 4.26
942 1771 1.118838 ATCAGTCTAGCTCAGCACCC 58.881 55.000 0.00 0.00 0.00 4.61
966 1796 1.227527 CCTGCACTTGTCCACACGA 60.228 57.895 0.00 0.00 0.00 4.35
968 1798 0.792640 CTGCACTTGTCCACACGATC 59.207 55.000 0.00 0.00 0.00 3.69
969 1799 0.392706 TGCACTTGTCCACACGATCT 59.607 50.000 0.00 0.00 0.00 2.75
970 1800 1.202639 TGCACTTGTCCACACGATCTT 60.203 47.619 0.00 0.00 0.00 2.40
971 1801 1.873591 GCACTTGTCCACACGATCTTT 59.126 47.619 0.00 0.00 0.00 2.52
972 1802 2.349817 GCACTTGTCCACACGATCTTTG 60.350 50.000 0.00 0.00 0.00 2.77
973 1803 1.873591 ACTTGTCCACACGATCTTTGC 59.126 47.619 0.00 0.00 0.00 3.68
974 1804 2.146342 CTTGTCCACACGATCTTTGCT 58.854 47.619 0.00 0.00 0.00 3.91
975 1805 2.254546 TGTCCACACGATCTTTGCTT 57.745 45.000 0.00 0.00 0.00 3.91
976 1806 1.872952 TGTCCACACGATCTTTGCTTG 59.127 47.619 0.00 0.00 0.00 4.01
977 1807 1.873591 GTCCACACGATCTTTGCTTGT 59.126 47.619 0.00 0.00 0.00 3.16
978 1808 2.290641 GTCCACACGATCTTTGCTTGTT 59.709 45.455 0.00 0.00 0.00 2.83
979 1809 2.290367 TCCACACGATCTTTGCTTGTTG 59.710 45.455 0.00 0.00 0.00 3.33
980 1810 2.033299 CCACACGATCTTTGCTTGTTGT 59.967 45.455 0.00 0.00 0.00 3.32
981 1811 3.291585 CACACGATCTTTGCTTGTTGTC 58.708 45.455 0.00 0.00 0.00 3.18
982 1812 2.942376 ACACGATCTTTGCTTGTTGTCA 59.058 40.909 0.00 0.00 0.00 3.58
983 1813 3.565482 ACACGATCTTTGCTTGTTGTCAT 59.435 39.130 0.00 0.00 0.00 3.06
984 1814 4.754618 ACACGATCTTTGCTTGTTGTCATA 59.245 37.500 0.00 0.00 0.00 2.15
985 1815 5.082059 CACGATCTTTGCTTGTTGTCATAC 58.918 41.667 0.00 0.00 0.00 2.39
986 1816 4.754618 ACGATCTTTGCTTGTTGTCATACA 59.245 37.500 0.00 0.00 0.00 2.29
987 1817 5.106948 ACGATCTTTGCTTGTTGTCATACAG 60.107 40.000 0.00 0.00 0.00 2.74
988 1818 5.120674 CGATCTTTGCTTGTTGTCATACAGA 59.879 40.000 0.00 0.00 0.00 3.41
989 1819 5.929697 TCTTTGCTTGTTGTCATACAGAG 57.070 39.130 0.00 0.00 0.00 3.35
990 1820 4.756642 TCTTTGCTTGTTGTCATACAGAGG 59.243 41.667 0.00 0.00 0.00 3.69
991 1821 3.057969 TGCTTGTTGTCATACAGAGGG 57.942 47.619 0.00 0.00 0.00 4.30
992 1822 1.740025 GCTTGTTGTCATACAGAGGGC 59.260 52.381 0.00 0.00 0.00 5.19
993 1823 2.359900 CTTGTTGTCATACAGAGGGCC 58.640 52.381 0.00 0.00 0.00 5.80
994 1824 0.249120 TGTTGTCATACAGAGGGCCG 59.751 55.000 0.00 0.00 0.00 6.13
995 1825 0.535335 GTTGTCATACAGAGGGCCGA 59.465 55.000 0.00 0.00 0.00 5.54
996 1826 1.139058 GTTGTCATACAGAGGGCCGAT 59.861 52.381 0.00 0.00 0.00 4.18
1068 1898 3.830192 GGGTACGGCGTGGACGAT 61.830 66.667 24.86 0.00 43.02 3.73
1304 2167 1.007271 ACGTCAACGAGCTGGTCAG 60.007 57.895 9.88 0.00 43.02 3.51
1464 2327 2.558313 GCCAACGTGAAGCAGCTC 59.442 61.111 0.00 0.00 0.00 4.09
1773 2636 2.044946 GCCATGAAGAAGGCCGGT 60.045 61.111 1.90 0.00 45.18 5.28
1776 2639 0.322456 CCATGAAGAAGGCCGGTTGA 60.322 55.000 1.90 0.00 0.00 3.18
2229 3092 0.104855 GCGTGTATCAGGAGATGGCA 59.895 55.000 0.00 0.00 35.67 4.92
2349 3212 0.179000 CTGGGGTGTACAGGATGCTC 59.821 60.000 0.00 0.00 42.53 4.26
2370 3233 2.879462 CCGCTGCTAACGACGGTC 60.879 66.667 0.00 0.00 40.77 4.79
2456 3319 2.037136 CCTGAGCTTGCCACGAAGG 61.037 63.158 0.00 0.00 41.84 3.46
2459 3322 0.465460 TGAGCTTGCCACGAAGGTTT 60.465 50.000 0.00 0.00 40.61 3.27
2490 3353 2.661675 CAGTCGTGCACCGTATATATGC 59.338 50.000 12.15 0.66 39.88 3.14
2508 3371 0.385974 GCGCCAGTGTGATTGTGAAC 60.386 55.000 0.00 0.00 0.00 3.18
2544 5284 8.524870 TTTACTTCGGAAAACATGTACTACTC 57.475 34.615 0.00 0.00 0.00 2.59
2545 5285 5.476614 ACTTCGGAAAACATGTACTACTCC 58.523 41.667 0.00 0.24 0.00 3.85
2556 5296 5.877012 ACATGTACTACTCCTTGATTTGCTG 59.123 40.000 0.00 0.00 0.00 4.41
2557 5297 4.832248 TGTACTACTCCTTGATTTGCTGG 58.168 43.478 0.00 0.00 0.00 4.85
2581 5321 8.281212 GGTGAATAAACCAAAGATGTGTCTAT 57.719 34.615 0.00 0.00 40.22 1.98
2589 5329 7.192852 ACCAAAGATGTGTCTATCTCTCATT 57.807 36.000 0.00 0.00 36.42 2.57
2630 5370 0.452184 AATCTCGTCTGCGATCACGT 59.548 50.000 3.59 0.00 46.80 4.49
2638 5378 2.021457 TCTGCGATCACGTCCAGAATA 58.979 47.619 0.00 0.00 41.98 1.75
2669 5409 1.072266 TGACCCAAGCCACACCTTAT 58.928 50.000 0.00 0.00 0.00 1.73
2709 5469 0.238289 AACATTTGCAGAACGCCTCG 59.762 50.000 0.00 0.00 41.33 4.63
2870 5631 1.065926 TGAACATTGATCTCCGCAGCT 60.066 47.619 0.00 0.00 0.00 4.24
2892 5653 7.924151 AGCTACCAAAAGAGCTCTCTTACACA 61.924 42.308 18.55 0.00 46.08 3.72
2893 5654 9.154264 AGCTACCAAAAGAGCTCTCTTACACAT 62.154 40.741 18.55 0.00 46.08 3.21
2971 5732 4.517453 TGCAAGAAAAGCACCGTTATAGTT 59.483 37.500 0.00 0.00 37.02 2.24
3008 5769 0.539051 CTCCACTCTTGCCTCCGAAT 59.461 55.000 0.00 0.00 0.00 3.34
3021 5783 3.545703 CCTCCGAATTTGGATGTAGCTT 58.454 45.455 15.11 0.00 37.41 3.74
3052 5814 1.852626 CCTTGACCCACCCCTCCTT 60.853 63.158 0.00 0.00 0.00 3.36
3056 5818 4.265507 ACCCACCCCTCCTTCGGT 62.266 66.667 0.00 0.00 0.00 4.69
3098 5860 4.796495 GATTTGGTCGCCGGGGCT 62.796 66.667 14.85 0.00 39.32 5.19
3247 6012 0.900182 ATCATCGCCTCCCGCTCATA 60.900 55.000 0.00 0.00 36.73 2.15
3400 6165 2.224018 GGCAAGACCAAAATCTGTGCAA 60.224 45.455 0.00 0.00 38.86 4.08
3426 6191 1.227823 CTCCTCACGCCCACAAACA 60.228 57.895 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 5.355630 TCGAAACAAACCTCAAAGTCATTGA 59.644 36.000 0.00 0.00 45.71 2.57
17 18 5.577835 TCGAAACAAACCTCAAAGTCATTG 58.422 37.500 0.00 0.00 40.58 2.82
18 19 5.828299 TCGAAACAAACCTCAAAGTCATT 57.172 34.783 0.00 0.00 0.00 2.57
19 20 5.828299 TTCGAAACAAACCTCAAAGTCAT 57.172 34.783 0.00 0.00 0.00 3.06
20 21 5.828299 ATTCGAAACAAACCTCAAAGTCA 57.172 34.783 0.00 0.00 0.00 3.41
21 22 7.581476 TGATATTCGAAACAAACCTCAAAGTC 58.419 34.615 0.00 0.00 0.00 3.01
22 23 7.228706 ACTGATATTCGAAACAAACCTCAAAGT 59.771 33.333 0.00 0.00 0.00 2.66
23 24 7.584987 ACTGATATTCGAAACAAACCTCAAAG 58.415 34.615 0.00 0.00 0.00 2.77
24 25 7.504924 ACTGATATTCGAAACAAACCTCAAA 57.495 32.000 0.00 0.00 0.00 2.69
25 26 8.664798 CATACTGATATTCGAAACAAACCTCAA 58.335 33.333 0.00 0.00 0.00 3.02
26 27 7.822334 ACATACTGATATTCGAAACAAACCTCA 59.178 33.333 0.00 0.00 0.00 3.86
27 28 8.197988 ACATACTGATATTCGAAACAAACCTC 57.802 34.615 0.00 0.00 0.00 3.85
28 29 7.822334 TGACATACTGATATTCGAAACAAACCT 59.178 33.333 0.00 0.00 0.00 3.50
29 30 7.970384 TGACATACTGATATTCGAAACAAACC 58.030 34.615 0.00 0.00 0.00 3.27
30 31 9.638300 GATGACATACTGATATTCGAAACAAAC 57.362 33.333 0.00 0.00 0.00 2.93
31 32 9.377312 TGATGACATACTGATATTCGAAACAAA 57.623 29.630 0.00 0.00 0.00 2.83
32 33 8.940768 TGATGACATACTGATATTCGAAACAA 57.059 30.769 0.00 0.00 0.00 2.83
33 34 8.817100 GTTGATGACATACTGATATTCGAAACA 58.183 33.333 0.00 2.43 0.00 2.83
34 35 8.817100 TGTTGATGACATACTGATATTCGAAAC 58.183 33.333 0.00 0.00 32.00 2.78
35 36 8.940768 TGTTGATGACATACTGATATTCGAAA 57.059 30.769 0.00 0.00 32.00 3.46
48 49 6.172630 ACTGTGCTTGTATGTTGATGACATA 58.827 36.000 0.00 0.00 47.00 2.29
50 51 4.388485 ACTGTGCTTGTATGTTGATGACA 58.612 39.130 0.00 0.00 43.71 3.58
51 52 6.668541 ATACTGTGCTTGTATGTTGATGAC 57.331 37.500 0.00 0.00 30.38 3.06
52 53 8.040727 AGTTATACTGTGCTTGTATGTTGATGA 58.959 33.333 0.00 0.00 33.32 2.92
53 54 8.201554 AGTTATACTGTGCTTGTATGTTGATG 57.798 34.615 0.00 0.00 33.32 3.07
54 55 7.495934 GGAGTTATACTGTGCTTGTATGTTGAT 59.504 37.037 0.00 0.00 33.32 2.57
55 56 6.816640 GGAGTTATACTGTGCTTGTATGTTGA 59.183 38.462 0.00 0.00 33.32 3.18
56 57 6.818644 AGGAGTTATACTGTGCTTGTATGTTG 59.181 38.462 0.00 0.00 33.32 3.33
57 58 6.947464 AGGAGTTATACTGTGCTTGTATGTT 58.053 36.000 0.00 0.00 33.32 2.71
58 59 6.546428 AGGAGTTATACTGTGCTTGTATGT 57.454 37.500 0.00 0.00 33.32 2.29
59 60 6.199154 CGAAGGAGTTATACTGTGCTTGTATG 59.801 42.308 0.00 0.00 33.32 2.39
60 61 6.273825 CGAAGGAGTTATACTGTGCTTGTAT 58.726 40.000 0.00 0.00 35.19 2.29
61 62 5.647589 CGAAGGAGTTATACTGTGCTTGTA 58.352 41.667 0.00 0.00 0.00 2.41
62 63 4.495422 CGAAGGAGTTATACTGTGCTTGT 58.505 43.478 0.00 0.00 0.00 3.16
63 64 3.307242 GCGAAGGAGTTATACTGTGCTTG 59.693 47.826 0.00 0.00 0.00 4.01
64 65 3.522553 GCGAAGGAGTTATACTGTGCTT 58.477 45.455 0.00 0.00 0.00 3.91
65 66 2.159085 GGCGAAGGAGTTATACTGTGCT 60.159 50.000 0.00 0.00 0.00 4.40
66 67 2.202566 GGCGAAGGAGTTATACTGTGC 58.797 52.381 0.00 0.00 0.00 4.57
67 68 2.483188 GGGGCGAAGGAGTTATACTGTG 60.483 54.545 0.00 0.00 0.00 3.66
68 69 1.761198 GGGGCGAAGGAGTTATACTGT 59.239 52.381 0.00 0.00 0.00 3.55
69 70 1.070289 GGGGGCGAAGGAGTTATACTG 59.930 57.143 0.00 0.00 0.00 2.74
70 71 1.343681 TGGGGGCGAAGGAGTTATACT 60.344 52.381 0.00 0.00 0.00 2.12
71 72 1.125633 TGGGGGCGAAGGAGTTATAC 58.874 55.000 0.00 0.00 0.00 1.47
72 73 1.125633 GTGGGGGCGAAGGAGTTATA 58.874 55.000 0.00 0.00 0.00 0.98
73 74 1.632965 GGTGGGGGCGAAGGAGTTAT 61.633 60.000 0.00 0.00 0.00 1.89
74 75 2.295602 GGTGGGGGCGAAGGAGTTA 61.296 63.158 0.00 0.00 0.00 2.24
75 76 3.647771 GGTGGGGGCGAAGGAGTT 61.648 66.667 0.00 0.00 0.00 3.01
76 77 4.974438 TGGTGGGGGCGAAGGAGT 62.974 66.667 0.00 0.00 0.00 3.85
77 78 3.411517 ATGGTGGGGGCGAAGGAG 61.412 66.667 0.00 0.00 0.00 3.69
78 79 3.727258 CATGGTGGGGGCGAAGGA 61.727 66.667 0.00 0.00 0.00 3.36
79 80 4.820744 CCATGGTGGGGGCGAAGG 62.821 72.222 2.57 0.00 32.67 3.46
87 88 2.565391 TGTATACTATCGCCATGGTGGG 59.435 50.000 24.82 16.66 38.19 4.61
88 89 3.006430 TGTGTATACTATCGCCATGGTGG 59.994 47.826 24.82 11.68 41.55 4.61
89 90 4.251543 TGTGTATACTATCGCCATGGTG 57.748 45.455 19.75 19.75 0.00 4.17
90 91 5.483685 AATGTGTATACTATCGCCATGGT 57.516 39.130 14.67 0.00 0.00 3.55
91 92 5.700832 ACAAATGTGTATACTATCGCCATGG 59.299 40.000 7.63 7.63 35.72 3.66
92 93 6.423604 TGACAAATGTGTATACTATCGCCATG 59.576 38.462 4.17 0.00 38.41 3.66
93 94 6.521162 TGACAAATGTGTATACTATCGCCAT 58.479 36.000 4.17 0.00 38.41 4.40
94 95 5.908341 TGACAAATGTGTATACTATCGCCA 58.092 37.500 4.17 0.00 38.41 5.69
95 96 5.107453 GCTGACAAATGTGTATACTATCGCC 60.107 44.000 4.17 0.00 38.41 5.54
96 97 5.107453 GGCTGACAAATGTGTATACTATCGC 60.107 44.000 4.17 0.00 38.41 4.58
97 98 6.216569 AGGCTGACAAATGTGTATACTATCG 58.783 40.000 4.17 0.00 38.41 2.92
98 99 7.210174 TGAGGCTGACAAATGTGTATACTATC 58.790 38.462 4.17 0.00 38.41 2.08
99 100 7.124573 TGAGGCTGACAAATGTGTATACTAT 57.875 36.000 4.17 0.00 38.41 2.12
100 101 6.538945 TGAGGCTGACAAATGTGTATACTA 57.461 37.500 4.17 0.00 38.41 1.82
101 102 5.420725 TGAGGCTGACAAATGTGTATACT 57.579 39.130 4.17 0.00 38.41 2.12
102 103 6.683974 AATGAGGCTGACAAATGTGTATAC 57.316 37.500 0.00 0.00 38.41 1.47
103 104 7.826744 TGTTAATGAGGCTGACAAATGTGTATA 59.173 33.333 0.00 0.00 38.41 1.47
104 105 6.658816 TGTTAATGAGGCTGACAAATGTGTAT 59.341 34.615 0.00 0.00 38.41 2.29
105 106 6.000840 TGTTAATGAGGCTGACAAATGTGTA 58.999 36.000 0.00 0.00 38.41 2.90
106 107 4.826733 TGTTAATGAGGCTGACAAATGTGT 59.173 37.500 0.00 0.00 42.10 3.72
107 108 5.375417 TGTTAATGAGGCTGACAAATGTG 57.625 39.130 0.00 0.00 0.00 3.21
108 109 5.562696 CGTTGTTAATGAGGCTGACAAATGT 60.563 40.000 0.00 0.00 32.66 2.71
109 110 4.853196 CGTTGTTAATGAGGCTGACAAATG 59.147 41.667 0.00 0.00 32.66 2.32
110 111 4.759693 TCGTTGTTAATGAGGCTGACAAAT 59.240 37.500 0.00 0.00 32.66 2.32
111 112 4.130857 TCGTTGTTAATGAGGCTGACAAA 58.869 39.130 0.00 0.00 32.66 2.83
112 113 3.734463 TCGTTGTTAATGAGGCTGACAA 58.266 40.909 0.00 0.00 0.00 3.18
113 114 3.394674 TCGTTGTTAATGAGGCTGACA 57.605 42.857 0.00 0.00 0.00 3.58
114 115 4.464112 GTTTCGTTGTTAATGAGGCTGAC 58.536 43.478 0.00 0.00 0.00 3.51
115 116 3.500680 GGTTTCGTTGTTAATGAGGCTGA 59.499 43.478 0.00 0.00 0.00 4.26
116 117 3.252215 TGGTTTCGTTGTTAATGAGGCTG 59.748 43.478 0.00 0.00 0.00 4.85
117 118 3.482436 TGGTTTCGTTGTTAATGAGGCT 58.518 40.909 0.00 0.00 0.00 4.58
118 119 3.907894 TGGTTTCGTTGTTAATGAGGC 57.092 42.857 0.00 0.00 0.00 4.70
119 120 5.008217 TCTGTTGGTTTCGTTGTTAATGAGG 59.992 40.000 0.00 0.00 0.00 3.86
120 121 6.055231 TCTGTTGGTTTCGTTGTTAATGAG 57.945 37.500 0.00 0.00 0.00 2.90
121 122 6.038825 ACATCTGTTGGTTTCGTTGTTAATGA 59.961 34.615 0.00 0.00 0.00 2.57
122 123 6.205784 ACATCTGTTGGTTTCGTTGTTAATG 58.794 36.000 0.00 0.00 0.00 1.90
123 124 6.038825 TGACATCTGTTGGTTTCGTTGTTAAT 59.961 34.615 0.00 0.00 0.00 1.40
124 125 5.354513 TGACATCTGTTGGTTTCGTTGTTAA 59.645 36.000 0.00 0.00 0.00 2.01
125 126 4.876679 TGACATCTGTTGGTTTCGTTGTTA 59.123 37.500 0.00 0.00 0.00 2.41
126 127 3.692101 TGACATCTGTTGGTTTCGTTGTT 59.308 39.130 0.00 0.00 0.00 2.83
127 128 3.275143 TGACATCTGTTGGTTTCGTTGT 58.725 40.909 0.00 0.00 0.00 3.32
128 129 3.559655 TCTGACATCTGTTGGTTTCGTTG 59.440 43.478 0.00 0.00 0.00 4.10
129 130 3.804036 TCTGACATCTGTTGGTTTCGTT 58.196 40.909 0.00 0.00 0.00 3.85
130 131 3.181465 ACTCTGACATCTGTTGGTTTCGT 60.181 43.478 0.00 0.00 0.00 3.85
131 132 3.393800 ACTCTGACATCTGTTGGTTTCG 58.606 45.455 0.00 0.00 0.00 3.46
132 133 4.576463 ACAACTCTGACATCTGTTGGTTTC 59.424 41.667 15.12 0.00 42.61 2.78
133 134 4.526970 ACAACTCTGACATCTGTTGGTTT 58.473 39.130 15.12 0.00 42.61 3.27
134 135 4.156455 ACAACTCTGACATCTGTTGGTT 57.844 40.909 15.12 0.00 42.61 3.67
135 136 3.845781 ACAACTCTGACATCTGTTGGT 57.154 42.857 15.12 0.00 42.61 3.67
136 137 5.934043 TCAATACAACTCTGACATCTGTTGG 59.066 40.000 15.12 3.47 42.61 3.77
137 138 7.172190 AGTTCAATACAACTCTGACATCTGTTG 59.828 37.037 11.36 11.36 43.55 3.33
138 139 7.220030 AGTTCAATACAACTCTGACATCTGTT 58.780 34.615 0.00 0.00 30.25 3.16
139 140 6.763355 AGTTCAATACAACTCTGACATCTGT 58.237 36.000 0.00 0.00 30.25 3.41
140 141 7.664082 AAGTTCAATACAACTCTGACATCTG 57.336 36.000 0.00 0.00 35.45 2.90
141 142 9.593134 GATAAGTTCAATACAACTCTGACATCT 57.407 33.333 0.00 0.00 35.45 2.90
142 143 9.371136 TGATAAGTTCAATACAACTCTGACATC 57.629 33.333 0.00 0.00 35.45 3.06
143 144 9.896645 ATGATAAGTTCAATACAACTCTGACAT 57.103 29.630 0.00 0.00 38.03 3.06
144 145 9.154847 CATGATAAGTTCAATACAACTCTGACA 57.845 33.333 0.00 0.00 38.03 3.58
145 146 8.119226 GCATGATAAGTTCAATACAACTCTGAC 58.881 37.037 0.00 0.00 38.03 3.51
146 147 7.280876 GGCATGATAAGTTCAATACAACTCTGA 59.719 37.037 0.00 0.00 38.03 3.27
147 148 7.066163 TGGCATGATAAGTTCAATACAACTCTG 59.934 37.037 0.00 0.00 38.03 3.35
148 149 7.112122 TGGCATGATAAGTTCAATACAACTCT 58.888 34.615 0.00 0.00 38.03 3.24
149 150 7.320443 TGGCATGATAAGTTCAATACAACTC 57.680 36.000 0.00 0.00 38.03 3.01
150 151 7.254898 CGATGGCATGATAAGTTCAATACAACT 60.255 37.037 3.81 0.00 38.03 3.16
151 152 6.852853 CGATGGCATGATAAGTTCAATACAAC 59.147 38.462 3.81 0.00 38.03 3.32
152 153 6.513230 GCGATGGCATGATAAGTTCAATACAA 60.513 38.462 3.81 0.00 38.03 2.41
153 154 5.049474 GCGATGGCATGATAAGTTCAATACA 60.049 40.000 3.81 0.00 38.03 2.29
154 155 5.385617 GCGATGGCATGATAAGTTCAATAC 58.614 41.667 3.81 0.00 38.03 1.89
155 156 4.152223 CGCGATGGCATGATAAGTTCAATA 59.848 41.667 3.81 0.00 38.03 1.90
156 157 3.058708 CGCGATGGCATGATAAGTTCAAT 60.059 43.478 3.81 0.00 38.03 2.57
157 158 2.287644 CGCGATGGCATGATAAGTTCAA 59.712 45.455 3.81 0.00 38.03 2.69
158 159 1.866601 CGCGATGGCATGATAAGTTCA 59.133 47.619 3.81 0.00 39.92 3.18
159 160 1.867233 ACGCGATGGCATGATAAGTTC 59.133 47.619 15.93 0.00 39.92 3.01
160 161 1.867233 GACGCGATGGCATGATAAGTT 59.133 47.619 15.93 0.00 39.92 2.66
161 162 1.502231 GACGCGATGGCATGATAAGT 58.498 50.000 15.93 0.00 39.92 2.24
162 163 0.436150 CGACGCGATGGCATGATAAG 59.564 55.000 15.93 0.00 39.92 1.73
163 164 0.249280 ACGACGCGATGGCATGATAA 60.249 50.000 15.93 0.00 39.92 1.75
164 165 0.939106 CACGACGCGATGGCATGATA 60.939 55.000 15.93 0.00 39.92 2.15
165 166 2.106938 ACGACGCGATGGCATGAT 59.893 55.556 15.93 0.00 39.92 2.45
166 167 2.885164 CACGACGCGATGGCATGA 60.885 61.111 15.93 0.00 39.92 3.07
167 168 2.885164 TCACGACGCGATGGCATG 60.885 61.111 15.93 1.92 39.92 4.06
168 169 2.885644 GTCACGACGCGATGGCAT 60.886 61.111 15.93 0.00 39.92 4.40
204 205 4.882396 GAGAAGAGGCCCTCGCGC 62.882 72.222 4.80 0.00 35.36 6.86
205 206 2.621371 GAAGAGAAGAGGCCCTCGCG 62.621 65.000 4.80 0.00 35.36 5.87
206 207 1.142965 GAAGAGAAGAGGCCCTCGC 59.857 63.158 4.80 1.57 35.36 5.03
207 208 0.744281 GAGAAGAGAAGAGGCCCTCG 59.256 60.000 4.80 0.00 35.36 4.63
208 209 1.859302 TGAGAAGAGAAGAGGCCCTC 58.141 55.000 1.26 1.26 0.00 4.30
209 210 2.187100 CTTGAGAAGAGAAGAGGCCCT 58.813 52.381 0.00 0.00 0.00 5.19
210 211 1.406751 GCTTGAGAAGAGAAGAGGCCC 60.407 57.143 0.00 0.00 0.00 5.80
211 212 1.554617 AGCTTGAGAAGAGAAGAGGCC 59.445 52.381 0.00 0.00 0.00 5.19
212 213 2.418609 GGAGCTTGAGAAGAGAAGAGGC 60.419 54.545 0.00 0.00 0.00 4.70
213 214 2.830923 TGGAGCTTGAGAAGAGAAGAGG 59.169 50.000 0.00 0.00 0.00 3.69
214 215 4.533919 TTGGAGCTTGAGAAGAGAAGAG 57.466 45.455 0.00 0.00 0.00 2.85
215 216 6.219417 CTATTGGAGCTTGAGAAGAGAAGA 57.781 41.667 0.00 0.00 0.00 2.87
230 231 2.548904 GCTCTTCTGCATGCTATTGGAG 59.451 50.000 20.33 18.38 36.49 3.86
231 232 2.569059 GCTCTTCTGCATGCTATTGGA 58.431 47.619 20.33 9.58 0.00 3.53
232 233 1.607628 GGCTCTTCTGCATGCTATTGG 59.392 52.381 20.33 5.65 34.04 3.16
233 234 2.033049 GTGGCTCTTCTGCATGCTATTG 59.967 50.000 20.33 7.09 34.04 1.90
234 235 2.295885 GTGGCTCTTCTGCATGCTATT 58.704 47.619 20.33 0.00 34.04 1.73
235 236 1.476471 GGTGGCTCTTCTGCATGCTAT 60.476 52.381 20.33 0.00 34.04 2.97
236 237 0.107508 GGTGGCTCTTCTGCATGCTA 60.108 55.000 20.33 4.02 34.04 3.49
237 238 1.378250 GGTGGCTCTTCTGCATGCT 60.378 57.895 20.33 0.00 34.04 3.79
238 239 2.413142 GGGTGGCTCTTCTGCATGC 61.413 63.158 11.82 11.82 34.04 4.06
239 240 0.323178 AAGGGTGGCTCTTCTGCATG 60.323 55.000 0.00 0.00 34.04 4.06
240 241 1.289160 TAAGGGTGGCTCTTCTGCAT 58.711 50.000 0.00 0.00 34.04 3.96
241 242 1.289160 ATAAGGGTGGCTCTTCTGCA 58.711 50.000 0.00 0.00 34.04 4.41
242 243 3.560636 TTATAAGGGTGGCTCTTCTGC 57.439 47.619 0.00 0.00 0.00 4.26
243 244 4.200092 GGTTTATAAGGGTGGCTCTTCTG 58.800 47.826 0.00 0.00 0.00 3.02
244 245 3.850173 TGGTTTATAAGGGTGGCTCTTCT 59.150 43.478 0.00 0.00 0.00 2.85
245 246 3.945921 GTGGTTTATAAGGGTGGCTCTTC 59.054 47.826 0.00 0.00 0.00 2.87
246 247 3.591977 AGTGGTTTATAAGGGTGGCTCTT 59.408 43.478 0.00 0.00 0.00 2.85
247 248 3.190439 AGTGGTTTATAAGGGTGGCTCT 58.810 45.455 0.00 0.00 0.00 4.09
248 249 3.542648 GAGTGGTTTATAAGGGTGGCTC 58.457 50.000 0.00 0.00 0.00 4.70
249 250 2.241430 GGAGTGGTTTATAAGGGTGGCT 59.759 50.000 0.00 0.00 0.00 4.75
250 251 2.025699 TGGAGTGGTTTATAAGGGTGGC 60.026 50.000 0.00 0.00 0.00 5.01
251 252 4.014406 GTTGGAGTGGTTTATAAGGGTGG 58.986 47.826 0.00 0.00 0.00 4.61
252 253 4.918588 AGTTGGAGTGGTTTATAAGGGTG 58.081 43.478 0.00 0.00 0.00 4.61
253 254 5.594199 AAGTTGGAGTGGTTTATAAGGGT 57.406 39.130 0.00 0.00 0.00 4.34
254 255 5.417894 GGAAAGTTGGAGTGGTTTATAAGGG 59.582 44.000 0.00 0.00 0.00 3.95
255 256 6.246163 AGGAAAGTTGGAGTGGTTTATAAGG 58.754 40.000 0.00 0.00 0.00 2.69
256 257 7.094334 GGAAGGAAAGTTGGAGTGGTTTATAAG 60.094 40.741 0.00 0.00 0.00 1.73
257 258 6.717997 GGAAGGAAAGTTGGAGTGGTTTATAA 59.282 38.462 0.00 0.00 0.00 0.98
258 259 6.183361 TGGAAGGAAAGTTGGAGTGGTTTATA 60.183 38.462 0.00 0.00 0.00 0.98
259 260 5.077564 GGAAGGAAAGTTGGAGTGGTTTAT 58.922 41.667 0.00 0.00 0.00 1.40
260 261 4.079672 TGGAAGGAAAGTTGGAGTGGTTTA 60.080 41.667 0.00 0.00 0.00 2.01
261 262 3.296854 GGAAGGAAAGTTGGAGTGGTTT 58.703 45.455 0.00 0.00 0.00 3.27
262 263 2.243736 TGGAAGGAAAGTTGGAGTGGTT 59.756 45.455 0.00 0.00 0.00 3.67
263 264 1.850345 TGGAAGGAAAGTTGGAGTGGT 59.150 47.619 0.00 0.00 0.00 4.16
264 265 2.158608 AGTGGAAGGAAAGTTGGAGTGG 60.159 50.000 0.00 0.00 0.00 4.00
265 266 3.214696 AGTGGAAGGAAAGTTGGAGTG 57.785 47.619 0.00 0.00 0.00 3.51
266 267 3.244596 GCTAGTGGAAGGAAAGTTGGAGT 60.245 47.826 0.00 0.00 0.00 3.85
267 268 3.244561 TGCTAGTGGAAGGAAAGTTGGAG 60.245 47.826 0.00 0.00 0.00 3.86
268 269 2.708861 TGCTAGTGGAAGGAAAGTTGGA 59.291 45.455 0.00 0.00 0.00 3.53
269 270 3.140325 TGCTAGTGGAAGGAAAGTTGG 57.860 47.619 0.00 0.00 0.00 3.77
270 271 3.441572 CCATGCTAGTGGAAGGAAAGTTG 59.558 47.826 0.00 0.00 42.02 3.16
271 272 3.074538 ACCATGCTAGTGGAAGGAAAGTT 59.925 43.478 6.39 0.00 42.02 2.66
272 273 2.644798 ACCATGCTAGTGGAAGGAAAGT 59.355 45.455 6.39 0.00 42.02 2.66
273 274 3.012518 CACCATGCTAGTGGAAGGAAAG 58.987 50.000 6.39 0.00 42.02 2.62
274 275 3.071874 CACCATGCTAGTGGAAGGAAA 57.928 47.619 6.39 0.00 42.02 3.13
275 276 2.787473 CACCATGCTAGTGGAAGGAA 57.213 50.000 6.39 0.00 42.02 3.36
282 283 3.055094 AGTTTAGTCCCACCATGCTAGTG 60.055 47.826 0.00 0.00 34.91 2.74
283 284 3.182152 AGTTTAGTCCCACCATGCTAGT 58.818 45.455 0.00 0.00 0.00 2.57
284 285 3.914426 AGTTTAGTCCCACCATGCTAG 57.086 47.619 0.00 0.00 0.00 3.42
285 286 3.054655 GGAAGTTTAGTCCCACCATGCTA 60.055 47.826 0.00 0.00 0.00 3.49
286 287 2.290960 GGAAGTTTAGTCCCACCATGCT 60.291 50.000 0.00 0.00 0.00 3.79
287 288 2.092323 GGAAGTTTAGTCCCACCATGC 58.908 52.381 0.00 0.00 0.00 4.06
295 296 1.703513 AGGTGGTGGGAAGTTTAGTCC 59.296 52.381 0.00 0.00 0.00 3.85
296 297 3.146847 CAAGGTGGTGGGAAGTTTAGTC 58.853 50.000 0.00 0.00 0.00 2.59
297 298 2.512476 ACAAGGTGGTGGGAAGTTTAGT 59.488 45.455 0.00 0.00 0.00 2.24
298 299 3.146847 GACAAGGTGGTGGGAAGTTTAG 58.853 50.000 0.00 0.00 0.00 1.85
299 300 2.510382 TGACAAGGTGGTGGGAAGTTTA 59.490 45.455 0.00 0.00 0.00 2.01
300 301 1.286553 TGACAAGGTGGTGGGAAGTTT 59.713 47.619 0.00 0.00 0.00 2.66
301 302 0.923358 TGACAAGGTGGTGGGAAGTT 59.077 50.000 0.00 0.00 0.00 2.66
302 303 1.149101 ATGACAAGGTGGTGGGAAGT 58.851 50.000 0.00 0.00 0.00 3.01
303 304 1.538047 CATGACAAGGTGGTGGGAAG 58.462 55.000 0.00 0.00 0.00 3.46
304 305 0.539438 GCATGACAAGGTGGTGGGAA 60.539 55.000 0.00 0.00 0.00 3.97
305 306 1.074775 GCATGACAAGGTGGTGGGA 59.925 57.895 0.00 0.00 0.00 4.37
306 307 1.978617 GGCATGACAAGGTGGTGGG 60.979 63.158 0.00 0.00 0.00 4.61
307 308 1.228521 TGGCATGACAAGGTGGTGG 60.229 57.895 0.00 0.00 0.00 4.61
308 309 1.526575 GGTGGCATGACAAGGTGGTG 61.527 60.000 0.58 0.00 0.00 4.17
309 310 1.228552 GGTGGCATGACAAGGTGGT 60.229 57.895 0.58 0.00 0.00 4.16
310 311 0.327924 TAGGTGGCATGACAAGGTGG 59.672 55.000 0.58 0.00 0.00 4.61
311 312 1.271325 TGTAGGTGGCATGACAAGGTG 60.271 52.381 0.58 0.00 0.00 4.00
312 313 1.064003 TGTAGGTGGCATGACAAGGT 58.936 50.000 0.58 0.00 0.00 3.50
313 314 2.019249 CATGTAGGTGGCATGACAAGG 58.981 52.381 0.58 0.00 44.60 3.61
314 315 2.019249 CCATGTAGGTGGCATGACAAG 58.981 52.381 0.58 0.00 44.60 3.16
315 316 1.340893 CCCATGTAGGTGGCATGACAA 60.341 52.381 0.58 0.00 44.60 3.18
316 317 0.255604 CCCATGTAGGTGGCATGACA 59.744 55.000 0.00 0.00 44.60 3.58
317 318 1.103398 GCCCATGTAGGTGGCATGAC 61.103 60.000 0.00 0.00 44.60 3.06
318 319 1.227102 GCCCATGTAGGTGGCATGA 59.773 57.895 0.00 0.00 44.60 3.07
319 320 3.846180 GCCCATGTAGGTGGCATG 58.154 61.111 5.18 0.00 44.70 4.06
322 323 1.641552 TAAGGGCCCATGTAGGTGGC 61.642 60.000 27.56 1.58 44.59 5.01
323 324 0.474184 CTAAGGGCCCATGTAGGTGG 59.526 60.000 27.56 0.00 39.05 4.61
324 325 1.417890 CTCTAAGGGCCCATGTAGGTG 59.582 57.143 27.56 13.86 34.66 4.00
325 326 1.294068 TCTCTAAGGGCCCATGTAGGT 59.706 52.381 27.56 0.00 34.66 3.08
326 327 2.103153 TCTCTAAGGGCCCATGTAGG 57.897 55.000 27.56 14.93 37.03 3.18
327 328 3.242867 TGATCTCTAAGGGCCCATGTAG 58.757 50.000 27.56 21.24 0.00 2.74
328 329 3.344535 TGATCTCTAAGGGCCCATGTA 57.655 47.619 27.56 12.19 0.00 2.29
329 330 2.196742 TGATCTCTAAGGGCCCATGT 57.803 50.000 27.56 11.59 0.00 3.21
330 331 3.582998 TTTGATCTCTAAGGGCCCATG 57.417 47.619 27.56 13.67 0.00 3.66
331 332 3.986134 AGATTTGATCTCTAAGGGCCCAT 59.014 43.478 27.56 16.50 33.42 4.00
332 333 3.137176 CAGATTTGATCTCTAAGGGCCCA 59.863 47.826 27.56 2.12 37.58 5.36
333 334 3.392616 TCAGATTTGATCTCTAAGGGCCC 59.607 47.826 16.46 16.46 37.58 5.80
334 335 4.696479 TCAGATTTGATCTCTAAGGGCC 57.304 45.455 0.00 0.00 37.58 5.80
335 336 7.579761 AATTTCAGATTTGATCTCTAAGGGC 57.420 36.000 0.00 0.00 37.58 5.19
351 352 8.267894 GCCTAGAGCCCATATAATAATTTCAGA 58.732 37.037 0.00 0.00 34.35 3.27
352 353 8.443953 GCCTAGAGCCCATATAATAATTTCAG 57.556 38.462 0.00 0.00 34.35 3.02
369 370 1.055040 ATGTGAGATGGGCCTAGAGC 58.945 55.000 4.53 0.00 42.60 4.09
370 371 3.135348 TGAAATGTGAGATGGGCCTAGAG 59.865 47.826 4.53 0.00 0.00 2.43
371 372 3.114606 TGAAATGTGAGATGGGCCTAGA 58.885 45.455 4.53 0.00 0.00 2.43
372 373 3.565764 TGAAATGTGAGATGGGCCTAG 57.434 47.619 4.53 0.00 0.00 3.02
373 374 3.010027 TGTTGAAATGTGAGATGGGCCTA 59.990 43.478 4.53 0.00 0.00 3.93
374 375 2.225091 TGTTGAAATGTGAGATGGGCCT 60.225 45.455 4.53 0.00 0.00 5.19
375 376 2.165030 CTGTTGAAATGTGAGATGGGCC 59.835 50.000 0.00 0.00 0.00 5.80
376 377 3.084039 TCTGTTGAAATGTGAGATGGGC 58.916 45.455 0.00 0.00 0.00 5.36
377 378 4.703575 ACATCTGTTGAAATGTGAGATGGG 59.296 41.667 0.00 0.00 42.85 4.00
378 379 5.892160 ACATCTGTTGAAATGTGAGATGG 57.108 39.130 0.00 0.00 42.85 3.51
385 386 4.335315 ACGTTGACACATCTGTTGAAATGT 59.665 37.500 0.00 0.00 36.56 2.71
386 387 4.847633 ACGTTGACACATCTGTTGAAATG 58.152 39.130 0.00 0.00 0.00 2.32
387 388 4.574421 TGACGTTGACACATCTGTTGAAAT 59.426 37.500 0.00 0.00 0.00 2.17
388 389 3.935828 TGACGTTGACACATCTGTTGAAA 59.064 39.130 0.00 0.00 0.00 2.69
389 390 3.526534 TGACGTTGACACATCTGTTGAA 58.473 40.909 0.00 0.00 0.00 2.69
390 391 3.172229 TGACGTTGACACATCTGTTGA 57.828 42.857 0.00 0.00 0.00 3.18
391 392 3.942539 TTGACGTTGACACATCTGTTG 57.057 42.857 0.00 0.00 0.00 3.33
392 393 4.318760 CGAATTGACGTTGACACATCTGTT 60.319 41.667 0.00 0.00 0.00 3.16
393 394 3.184379 CGAATTGACGTTGACACATCTGT 59.816 43.478 0.00 0.00 0.00 3.41
394 395 3.423515 CCGAATTGACGTTGACACATCTG 60.424 47.826 0.00 0.00 0.00 2.90
395 396 2.736721 CCGAATTGACGTTGACACATCT 59.263 45.455 0.00 0.00 0.00 2.90
400 401 2.552031 TCAACCGAATTGACGTTGACA 58.448 42.857 7.24 0.00 42.62 3.58
423 424 0.179174 GGGTAACGAAATGCGCTTGG 60.179 55.000 9.73 0.00 46.04 3.61
424 425 3.306206 GGGTAACGAAATGCGCTTG 57.694 52.632 9.73 0.00 46.04 4.01
462 463 2.423538 GTGGCTGAAATACGCTTGGAAT 59.576 45.455 0.00 0.00 0.00 3.01
463 464 1.810151 GTGGCTGAAATACGCTTGGAA 59.190 47.619 0.00 0.00 0.00 3.53
464 465 1.271108 TGTGGCTGAAATACGCTTGGA 60.271 47.619 0.00 0.00 0.00 3.53
465 466 1.164411 TGTGGCTGAAATACGCTTGG 58.836 50.000 0.00 0.00 0.00 3.61
466 467 2.987413 TTGTGGCTGAAATACGCTTG 57.013 45.000 0.00 0.00 0.00 4.01
467 468 5.637006 TTTATTGTGGCTGAAATACGCTT 57.363 34.783 0.00 0.00 0.00 4.68
468 469 5.637006 TTTTATTGTGGCTGAAATACGCT 57.363 34.783 0.00 0.00 0.00 5.07
469 470 4.265320 GCTTTTATTGTGGCTGAAATACGC 59.735 41.667 0.00 0.00 0.00 4.42
470 471 4.798387 GGCTTTTATTGTGGCTGAAATACG 59.202 41.667 0.00 0.00 0.00 3.06
471 472 5.719173 TGGCTTTTATTGTGGCTGAAATAC 58.281 37.500 0.00 0.00 0.00 1.89
472 473 5.105392 CCTGGCTTTTATTGTGGCTGAAATA 60.105 40.000 0.00 0.00 0.00 1.40
473 474 4.322953 CCTGGCTTTTATTGTGGCTGAAAT 60.323 41.667 0.00 0.00 0.00 2.17
474 475 3.006752 CCTGGCTTTTATTGTGGCTGAAA 59.993 43.478 0.00 0.00 0.00 2.69
475 476 2.562298 CCTGGCTTTTATTGTGGCTGAA 59.438 45.455 0.00 0.00 0.00 3.02
476 477 2.170166 CCTGGCTTTTATTGTGGCTGA 58.830 47.619 0.00 0.00 0.00 4.26
477 478 1.404583 GCCTGGCTTTTATTGTGGCTG 60.405 52.381 12.43 0.00 36.32 4.85
478 479 0.897621 GCCTGGCTTTTATTGTGGCT 59.102 50.000 12.43 0.00 36.32 4.75
479 480 0.108186 GGCCTGGCTTTTATTGTGGC 60.108 55.000 19.68 0.00 38.28 5.01
480 481 1.265236 TGGCCTGGCTTTTATTGTGG 58.735 50.000 19.68 0.00 0.00 4.17
504 506 1.550659 TACGACAACGCGTCTTTGCC 61.551 55.000 14.44 0.00 44.39 4.52
561 563 7.583762 GCGCTACGATTTTTATACGGTATTTTT 59.416 33.333 5.89 0.00 0.00 1.94
590 592 5.181690 TGTACTCATTGCCACAAGAAAAC 57.818 39.130 0.00 0.00 0.00 2.43
591 593 5.534278 TGATGTACTCATTGCCACAAGAAAA 59.466 36.000 0.00 0.00 34.06 2.29
664 672 0.729690 GAAGTTCGAGGCCAGCATTC 59.270 55.000 5.01 0.00 0.00 2.67
668 676 2.815647 CGGAAGTTCGAGGCCAGC 60.816 66.667 5.01 0.00 0.00 4.85
676 685 1.287041 GGTCGTTTCCCGGAAGTTCG 61.287 60.000 0.73 7.41 37.11 3.95
686 695 0.810823 TCCGTGTGTTGGTCGTTTCC 60.811 55.000 0.00 0.00 0.00 3.13
710 719 9.621629 TGGTATTCCGATTTTGTAGACATTATT 57.378 29.630 0.00 0.00 36.30 1.40
727 736 2.034339 GCGTGTACGAAATGGTATTCCG 60.034 50.000 8.82 0.00 43.02 4.30
787 796 3.198872 GTGCTCTTAGCTAATTCCGCTT 58.801 45.455 6.64 0.00 42.97 4.68
829 838 2.047560 ACGTAAACCTCGCCCTGC 60.048 61.111 0.00 0.00 0.00 4.85
836 845 1.401018 GCATGCAACCACGTAAACCTC 60.401 52.381 14.21 0.00 0.00 3.85
839 848 2.346099 ATGCATGCAACCACGTAAAC 57.654 45.000 26.68 0.00 0.00 2.01
844 1659 0.733566 GGTCAATGCATGCAACCACG 60.734 55.000 27.63 14.61 0.00 4.94
857 1672 7.977818 TCTTTATATATGTGAGGCTGGTCAAT 58.022 34.615 0.00 0.00 0.00 2.57
889 1711 3.561310 GGATATGATGACAAGAAGCGCAA 59.439 43.478 11.47 0.00 0.00 4.85
897 1719 5.001874 CAGGGACATGGATATGATGACAAG 58.998 45.833 0.00 0.00 37.73 3.16
916 1745 0.392336 GAGCTAGACTGATGCCAGGG 59.608 60.000 0.00 0.00 44.60 4.45
924 1753 0.040351 AGGGTGCTGAGCTAGACTGA 59.960 55.000 5.83 0.00 0.00 3.41
960 1789 3.242706 TGACAACAAGCAAAGATCGTGTG 60.243 43.478 2.03 0.00 0.00 3.82
966 1796 5.413833 CCTCTGTATGACAACAAGCAAAGAT 59.586 40.000 0.00 0.00 0.00 2.40
968 1798 4.083110 CCCTCTGTATGACAACAAGCAAAG 60.083 45.833 0.00 0.00 0.00 2.77
969 1799 3.820467 CCCTCTGTATGACAACAAGCAAA 59.180 43.478 0.00 0.00 0.00 3.68
970 1800 3.411446 CCCTCTGTATGACAACAAGCAA 58.589 45.455 0.00 0.00 0.00 3.91
971 1801 2.875672 GCCCTCTGTATGACAACAAGCA 60.876 50.000 0.00 0.00 0.00 3.91
972 1802 1.740025 GCCCTCTGTATGACAACAAGC 59.260 52.381 0.00 0.00 0.00 4.01
973 1803 2.359900 GGCCCTCTGTATGACAACAAG 58.640 52.381 0.00 0.00 0.00 3.16
974 1804 1.338674 CGGCCCTCTGTATGACAACAA 60.339 52.381 0.00 0.00 0.00 2.83
975 1805 0.249120 CGGCCCTCTGTATGACAACA 59.751 55.000 0.00 0.00 0.00 3.33
976 1806 0.535335 TCGGCCCTCTGTATGACAAC 59.465 55.000 0.00 0.00 0.00 3.32
977 1807 1.496060 ATCGGCCCTCTGTATGACAA 58.504 50.000 0.00 0.00 0.00 3.18
978 1808 2.239400 CTATCGGCCCTCTGTATGACA 58.761 52.381 0.00 0.00 0.00 3.58
979 1809 1.067495 GCTATCGGCCCTCTGTATGAC 60.067 57.143 0.00 0.00 34.27 3.06
980 1810 1.257743 GCTATCGGCCCTCTGTATGA 58.742 55.000 0.00 0.00 34.27 2.15
981 1811 0.969149 TGCTATCGGCCCTCTGTATG 59.031 55.000 0.00 0.00 40.92 2.39
982 1812 1.552337 CATGCTATCGGCCCTCTGTAT 59.448 52.381 0.00 0.00 40.92 2.29
983 1813 0.969149 CATGCTATCGGCCCTCTGTA 59.031 55.000 0.00 0.00 40.92 2.74
984 1814 1.750930 CATGCTATCGGCCCTCTGT 59.249 57.895 0.00 0.00 40.92 3.41
985 1815 1.004080 CCATGCTATCGGCCCTCTG 60.004 63.158 0.00 0.00 40.92 3.35
986 1816 2.219875 CCCATGCTATCGGCCCTCT 61.220 63.158 0.00 0.00 40.92 3.69
987 1817 2.348998 CCCATGCTATCGGCCCTC 59.651 66.667 0.00 0.00 40.92 4.30
988 1818 3.252284 CCCCATGCTATCGGCCCT 61.252 66.667 0.00 0.00 40.92 5.19
989 1819 3.133365 AACCCCATGCTATCGGCCC 62.133 63.158 0.00 0.00 40.92 5.80
990 1820 1.600916 GAACCCCATGCTATCGGCC 60.601 63.158 0.00 0.00 40.92 6.13
991 1821 1.961277 CGAACCCCATGCTATCGGC 60.961 63.158 0.00 0.00 42.22 5.54
992 1822 0.880278 CACGAACCCCATGCTATCGG 60.880 60.000 11.34 0.00 37.81 4.18
993 1823 0.179084 ACACGAACCCCATGCTATCG 60.179 55.000 0.00 6.81 39.30 2.92
994 1824 2.480845 GTACACGAACCCCATGCTATC 58.519 52.381 0.00 0.00 0.00 2.08
995 1825 1.140252 GGTACACGAACCCCATGCTAT 59.860 52.381 0.00 0.00 33.02 2.97
996 1826 0.538118 GGTACACGAACCCCATGCTA 59.462 55.000 0.00 0.00 33.02 3.49
1068 1898 0.603707 CCTTCTTCGCCAGCTTCACA 60.604 55.000 0.00 0.00 0.00 3.58
1482 2345 2.683152 GCCGAGGTAGGAGAAGTACTCA 60.683 54.545 0.00 0.00 46.54 3.41
1773 2636 2.263852 CTCGCCTGCTGCTCTCAA 59.736 61.111 0.00 0.00 38.05 3.02
2331 3194 2.296920 GAGCATCCTGTACACCCCA 58.703 57.895 0.00 0.00 0.00 4.96
2370 3233 1.153489 CATCCCAGTCTGCTCGTGG 60.153 63.158 0.00 0.00 0.00 4.94
2421 3284 3.626924 GTGGACGTGGAGGTGCCT 61.627 66.667 0.00 0.00 37.63 4.75
2456 3319 2.409371 GCACGACTGCACGTACTTAAAC 60.409 50.000 1.70 0.00 44.76 2.01
2459 3322 3.096541 GCACGACTGCACGTACTTA 57.903 52.632 1.70 0.00 44.76 2.24
2481 3344 4.690748 ACAATCACACTGGCGCATATATAC 59.309 41.667 10.83 0.00 0.00 1.47
2489 3352 0.385974 GTTCACAATCACACTGGCGC 60.386 55.000 0.00 0.00 0.00 6.53
2490 3353 0.110688 CGTTCACAATCACACTGGCG 60.111 55.000 0.00 0.00 0.00 5.69
2508 3371 4.310675 TCCGAAGTAAATAAAACACGCG 57.689 40.909 3.53 3.53 0.00 6.01
2544 5284 5.170748 GGTTTATTCACCAGCAAATCAAGG 58.829 41.667 0.00 0.00 36.73 3.61
2545 5285 5.782047 TGGTTTATTCACCAGCAAATCAAG 58.218 37.500 0.00 0.00 42.27 3.02
2556 5296 6.575162 AGACACATCTTTGGTTTATTCACC 57.425 37.500 0.00 0.00 37.34 4.02
2557 5297 9.167311 AGATAGACACATCTTTGGTTTATTCAC 57.833 33.333 0.00 0.00 36.29 3.18
2600 5340 5.008712 TCGCAGACGAGATTGACATAGTTAT 59.991 40.000 0.00 0.00 45.12 1.89
2638 5378 2.356535 GCTTGGGTCATCTCCAGATTGT 60.357 50.000 0.00 0.00 35.48 2.71
2649 5389 1.072266 TAAGGTGTGGCTTGGGTCAT 58.928 50.000 0.00 0.00 0.00 3.06
2669 5409 3.601435 TGCCGTGCATAAGTTAGCTTTA 58.399 40.909 0.00 0.00 33.01 1.85
2709 5469 1.664874 GGATTTTCGTGTTTCGTGGGC 60.665 52.381 0.00 0.00 40.80 5.36
2741 5502 3.054875 TGGAGGAGATCAAGACCATGTTG 60.055 47.826 0.00 0.00 0.00 3.33
2743 5504 2.503356 GTGGAGGAGATCAAGACCATGT 59.497 50.000 0.00 0.00 0.00 3.21
2849 5610 1.063174 GCTGCGGAGATCAATGTTCAC 59.937 52.381 8.65 0.00 0.00 3.18
2870 5631 5.801531 TGTGTAAGAGAGCTCTTTTGGTA 57.198 39.130 25.55 11.37 46.95 3.25
2892 5653 2.213499 CGAGGCTGCCGAGATAAAAAT 58.787 47.619 13.96 0.00 0.00 1.82
2893 5654 1.651987 CGAGGCTGCCGAGATAAAAA 58.348 50.000 13.96 0.00 0.00 1.94
2971 5732 2.357034 GAGGCGTGGTGCTTCGAA 60.357 61.111 0.00 0.00 45.43 3.71
3008 5769 3.244078 ACACTGACGAAGCTACATCCAAA 60.244 43.478 0.00 0.00 0.00 3.28
3021 5783 0.531974 GTCAAGGCCAACACTGACGA 60.532 55.000 5.01 0.00 0.00 4.20
3093 5855 2.683465 TTCATGAGAGGCCAGCCCC 61.683 63.158 5.01 0.00 36.58 5.80
3098 5860 1.274703 GGGAGGTTCATGAGAGGCCA 61.275 60.000 5.01 0.00 0.00 5.36
3247 6012 2.827322 TGGTTTGCTAAAGCTCATGCAT 59.173 40.909 3.26 0.00 42.74 3.96
3400 6165 1.333177 GGGCGTGAGGAGACTATCAT 58.667 55.000 0.00 0.00 44.43 2.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.