Multiple sequence alignment - TraesCS6B01G169200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G169200 chr6B 100.000 6194 0 0 1 6194 179992800 179986607 0.000000e+00 11439
1 TraesCS6B01G169200 chr6B 96.555 987 32 2 1 985 645573825 645574811 0.000000e+00 1633
2 TraesCS6B01G169200 chr6B 99.479 192 1 0 2918 3109 179989698 179989507 3.550000e-92 350
3 TraesCS6B01G169200 chr6B 99.479 192 1 0 3103 3294 179989883 179989692 3.550000e-92 350
4 TraesCS6B01G169200 chr6B 100.000 86 0 0 5499 5584 657068534 657068619 6.430000e-35 159
5 TraesCS6B01G169200 chr6A 97.300 2259 49 7 3103 5355 115829554 115827302 0.000000e+00 3823
6 TraesCS6B01G169200 chr6A 98.341 2110 32 2 1003 3109 115831472 115829363 0.000000e+00 3699
7 TraesCS6B01G169200 chr6D 93.194 2204 121 17 3211 5393 96825412 96823217 0.000000e+00 3212
8 TraesCS6B01G169200 chr6D 95.175 1658 62 9 1003 2649 96827442 96825792 0.000000e+00 2603
9 TraesCS6B01G169200 chr6D 94.157 599 28 4 5602 6194 96821928 96821331 0.000000e+00 905
10 TraesCS6B01G169200 chr6D 86.119 353 39 7 2646 2991 96825756 96825407 7.580000e-99 372
11 TraesCS6B01G169200 chr6D 96.429 84 3 0 3026 3109 96825412 96825329 8.370000e-29 139
12 TraesCS6B01G169200 chr4B 96.657 987 30 3 1 985 347642566 347643551 0.000000e+00 1637
13 TraesCS6B01G169200 chr4B 96.024 1006 36 4 1 1004 64789967 64788964 0.000000e+00 1633
14 TraesCS6B01G169200 chr5B 96.555 987 32 2 1 985 633703567 633702581 0.000000e+00 1633
15 TraesCS6B01G169200 chr5B 96.739 92 3 0 5500 5591 249578671 249578580 2.990000e-33 154
16 TraesCS6B01G169200 chr2B 96.555 987 32 2 1 985 742106116 742105130 0.000000e+00 1633
17 TraesCS6B01G169200 chr2B 96.454 987 33 2 1 985 81750981 81749995 0.000000e+00 1628
18 TraesCS6B01G169200 chr2B 98.824 85 1 0 5500 5584 23029138 23029054 1.080000e-32 152
19 TraesCS6B01G169200 chr2B 97.647 85 2 0 5500 5584 23029054 23029138 5.000000e-31 147
20 TraesCS6B01G169200 chr1B 96.454 987 33 2 1 985 90182780 90183766 0.000000e+00 1628
21 TraesCS6B01G169200 chr1B 100.000 86 0 0 5499 5584 118514642 118514557 6.430000e-35 159
22 TraesCS6B01G169200 chr3A 96.356 988 33 3 1 986 547191158 547190172 0.000000e+00 1622
23 TraesCS6B01G169200 chr2A 96.353 987 32 4 1 985 763256262 763257246 0.000000e+00 1620
24 TraesCS6B01G169200 chr7B 86.782 1445 154 25 3100 4522 620661923 620663352 0.000000e+00 1576
25 TraesCS6B01G169200 chr7B 87.277 951 77 24 1033 1940 620659940 620660889 0.000000e+00 1046
26 TraesCS6B01G169200 chr7B 85.480 916 87 24 1988 2890 620660884 620661766 0.000000e+00 913
27 TraesCS6B01G169200 chr7B 86.136 440 49 7 4772 5200 620663369 620663807 1.220000e-126 464
28 TraesCS6B01G169200 chr7B 89.823 226 19 3 2885 3109 620661892 620662114 2.830000e-73 287
29 TraesCS6B01G169200 chr7A 86.458 1440 155 28 3100 4522 652720040 652718624 0.000000e+00 1543
30 TraesCS6B01G169200 chr7A 85.421 974 74 33 1033 1940 652722028 652721057 0.000000e+00 950
31 TraesCS6B01G169200 chr7A 85.246 915 87 28 1991 2889 652721059 652720177 0.000000e+00 898
32 TraesCS6B01G169200 chr7A 88.496 226 22 4 2885 3109 652720071 652719849 2.850000e-68 270
33 TraesCS6B01G169200 chr7A 91.176 102 6 3 5500 5600 674281854 674281755 1.080000e-27 135
34 TraesCS6B01G169200 chr7D 88.925 930 74 19 1033 1934 566552047 566551119 0.000000e+00 1120
35 TraesCS6B01G169200 chr7D 90.013 771 73 4 3754 4522 566549376 566548608 0.000000e+00 994
36 TraesCS6B01G169200 chr7D 86.697 887 89 16 1988 2858 566551112 566550239 0.000000e+00 957
37 TraesCS6B01G169200 chr7D 83.725 639 68 19 3100 3711 566550032 566549403 6.970000e-159 571
38 TraesCS6B01G169200 chr7D 88.352 455 49 2 4772 5222 566548591 566548137 1.520000e-150 544
39 TraesCS6B01G169200 chr7D 77.075 253 28 13 2879 3104 566550069 566549820 1.090000e-22 119
40 TraesCS6B01G169200 chr3B 100.000 86 0 0 5499 5584 498466998 498466913 6.430000e-35 159
41 TraesCS6B01G169200 chr5D 75.786 318 65 12 5849 6159 264032784 264032472 3.870000e-32 150
42 TraesCS6B01G169200 chr4A 97.674 86 2 0 5500 5585 15772969 15773054 1.390000e-31 148
43 TraesCS6B01G169200 chr1A 97.647 85 2 0 5500 5584 27400025 27400109 5.000000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G169200 chr6B 179986607 179992800 6193 True 4046.333333 11439 99.652667 1 6194 3 chr6B.!!$R1 6193
1 TraesCS6B01G169200 chr6B 645573825 645574811 986 False 1633.000000 1633 96.555000 1 985 1 chr6B.!!$F1 984
2 TraesCS6B01G169200 chr6A 115827302 115831472 4170 True 3761.000000 3823 97.820500 1003 5355 2 chr6A.!!$R1 4352
3 TraesCS6B01G169200 chr6D 96821331 96827442 6111 True 1446.200000 3212 93.014800 1003 6194 5 chr6D.!!$R1 5191
4 TraesCS6B01G169200 chr4B 347642566 347643551 985 False 1637.000000 1637 96.657000 1 985 1 chr4B.!!$F1 984
5 TraesCS6B01G169200 chr4B 64788964 64789967 1003 True 1633.000000 1633 96.024000 1 1004 1 chr4B.!!$R1 1003
6 TraesCS6B01G169200 chr5B 633702581 633703567 986 True 1633.000000 1633 96.555000 1 985 1 chr5B.!!$R2 984
7 TraesCS6B01G169200 chr2B 742105130 742106116 986 True 1633.000000 1633 96.555000 1 985 1 chr2B.!!$R3 984
8 TraesCS6B01G169200 chr2B 81749995 81750981 986 True 1628.000000 1628 96.454000 1 985 1 chr2B.!!$R2 984
9 TraesCS6B01G169200 chr1B 90182780 90183766 986 False 1628.000000 1628 96.454000 1 985 1 chr1B.!!$F1 984
10 TraesCS6B01G169200 chr3A 547190172 547191158 986 True 1622.000000 1622 96.356000 1 986 1 chr3A.!!$R1 985
11 TraesCS6B01G169200 chr2A 763256262 763257246 984 False 1620.000000 1620 96.353000 1 985 1 chr2A.!!$F1 984
12 TraesCS6B01G169200 chr7B 620659940 620663807 3867 False 857.200000 1576 87.099600 1033 5200 5 chr7B.!!$F1 4167
13 TraesCS6B01G169200 chr7A 652718624 652722028 3404 True 915.250000 1543 86.405250 1033 4522 4 chr7A.!!$R2 3489
14 TraesCS6B01G169200 chr7D 566548137 566552047 3910 True 717.500000 1120 85.797833 1033 5222 6 chr7D.!!$R1 4189

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
832 833 0.104304 GTTGTGTGAGAGGGTGACGT 59.896 55.0 0.00 0.0 0.00 4.34 F
1602 1671 0.895530 GAGGATTCTCGGTGGTGTCA 59.104 55.0 0.00 0.0 0.00 3.58 F
3079 3487 0.107945 AGAAAGATGGAGACTGCGGC 60.108 55.0 0.00 0.0 0.00 6.53 F
3153 3561 0.029163 TGATAATGGGCAGGGAGGGA 60.029 55.0 0.00 0.0 0.00 4.20 F
3241 3649 0.037303 CAAGGAAGAAGCTCTGGGCA 59.963 55.0 0.74 0.0 44.79 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1867 1943 0.915872 TGCTGACCATCATCCCCACT 60.916 55.000 0.00 0.00 0.00 4.00 R
3134 3542 0.029163 TCCCTCCCTGCCCATTATCA 60.029 55.000 0.00 0.00 0.00 2.15 R
4262 4700 4.412199 CCTTTGGAGTATGGATCCCTACAA 59.588 45.833 24.08 17.11 35.86 2.41 R
4445 4891 5.933617 AGAGCATATTTCATGGCTAGTGAA 58.066 37.500 0.00 0.00 36.59 3.18 R
5250 5722 2.941720 GAGATGTTCCATTGACTGCCTC 59.058 50.000 0.00 0.00 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 5.702209 GGGAGTACAAAAATAAACCGTCTCA 59.298 40.000 0.00 0.00 0.00 3.27
55 56 0.966179 TAAACCGTCTCAGCTGAGCA 59.034 50.000 34.48 21.92 41.80 4.26
230 231 6.575162 AAAACTTCCGAATAGCAATCTTGT 57.425 33.333 0.00 0.00 0.00 3.16
358 359 3.118665 TCGTCATTTGGATCAGAGCATGA 60.119 43.478 0.00 0.00 43.70 3.07
546 547 0.952497 CTTCAGCACCACGAGCATGT 60.952 55.000 0.00 0.00 0.00 3.21
563 564 0.178973 TGTGACTGAGGGACGAAGGA 60.179 55.000 0.00 0.00 0.00 3.36
592 593 2.224402 GGGAAGGAAGCGAGCTAATGAT 60.224 50.000 0.00 0.00 0.00 2.45
832 833 0.104304 GTTGTGTGAGAGGGTGACGT 59.896 55.000 0.00 0.00 0.00 4.34
845 846 2.472816 GGTGACGTGAAACTAAACCGA 58.527 47.619 0.00 0.00 31.75 4.69
889 891 4.571372 AAAACCAGCGAAATAAAACGGA 57.429 36.364 0.00 0.00 0.00 4.69
900 902 1.659022 TAAAACGGATGGGAGGTGGA 58.341 50.000 0.00 0.00 0.00 4.02
987 991 5.420409 GACCTACCAACTGAGACATTAAGG 58.580 45.833 0.00 0.00 0.00 2.69
1025 1030 3.360867 TCACTCAAAAGGGCAGAAACAA 58.639 40.909 0.00 0.00 0.00 2.83
1226 1247 2.168496 TCGGAAGGTACCTTGACTCAG 58.832 52.381 31.81 17.30 36.26 3.35
1261 1305 2.622436 CTTCCTTTGAGCTAGGGAACG 58.378 52.381 1.10 0.00 34.61 3.95
1263 1307 1.975680 TCCTTTGAGCTAGGGAACGTT 59.024 47.619 0.00 0.00 33.41 3.99
1602 1671 0.895530 GAGGATTCTCGGTGGTGTCA 59.104 55.000 0.00 0.00 0.00 3.58
1867 1943 1.483415 GGAGGCCTGAATGTACGGTTA 59.517 52.381 12.00 0.00 0.00 2.85
1986 2066 0.953960 CCGGACCTACAAAGCACCAC 60.954 60.000 0.00 0.00 0.00 4.16
2042 2176 6.844696 AGTACCAAATATACATGACTTGCG 57.155 37.500 0.00 0.00 0.00 4.85
2112 2247 2.501723 AGATGCTGGTCCTGTCGTTTAT 59.498 45.455 0.00 0.00 0.00 1.40
2327 2468 7.268586 TCTTCTGACAGTCTTTGGCTATATTC 58.731 38.462 1.59 0.00 35.09 1.75
2394 2535 2.111384 GGAGGAAGGATGACAGCTACA 58.889 52.381 0.00 0.00 0.00 2.74
2688 2873 2.159179 AAAGCCACCCACAAAGTTCT 57.841 45.000 0.00 0.00 0.00 3.01
2790 2983 2.372264 CATGTGGCCACTAGAAAGCAT 58.628 47.619 34.75 15.85 0.00 3.79
2977 3361 1.064824 GCAGGGAGGGAGATGGGAAT 61.065 60.000 0.00 0.00 0.00 3.01
3006 3391 1.561643 TGGCGAGAAGAAGATCCAGT 58.438 50.000 0.00 0.00 0.00 4.00
3071 3479 0.182299 GGGCAGGGAGAAAGATGGAG 59.818 60.000 0.00 0.00 0.00 3.86
3072 3480 1.207791 GGCAGGGAGAAAGATGGAGA 58.792 55.000 0.00 0.00 0.00 3.71
3073 3481 1.134250 GGCAGGGAGAAAGATGGAGAC 60.134 57.143 0.00 0.00 0.00 3.36
3074 3482 1.836802 GCAGGGAGAAAGATGGAGACT 59.163 52.381 0.00 0.00 0.00 3.24
3075 3483 2.419851 GCAGGGAGAAAGATGGAGACTG 60.420 54.545 0.00 0.00 0.00 3.51
3076 3484 1.836802 AGGGAGAAAGATGGAGACTGC 59.163 52.381 0.00 0.00 0.00 4.40
3077 3485 1.472376 GGGAGAAAGATGGAGACTGCG 60.472 57.143 0.00 0.00 0.00 5.18
3078 3486 1.472376 GGAGAAAGATGGAGACTGCGG 60.472 57.143 0.00 0.00 0.00 5.69
3079 3487 0.107945 AGAAAGATGGAGACTGCGGC 60.108 55.000 0.00 0.00 0.00 6.53
3080 3488 1.078143 AAAGATGGAGACTGCGGCC 60.078 57.895 0.00 0.00 0.00 6.13
3081 3489 2.859273 AAAGATGGAGACTGCGGCCG 62.859 60.000 24.05 24.05 0.00 6.13
3095 3503 3.483869 GCCGCCAGGGAGGAAGAT 61.484 66.667 12.67 0.00 41.22 2.40
3096 3504 3.049080 GCCGCCAGGGAGGAAGATT 62.049 63.158 12.67 0.00 41.22 2.40
3097 3505 1.147153 CCGCCAGGGAGGAAGATTC 59.853 63.158 1.29 0.00 41.22 2.52
3098 3506 1.626356 CCGCCAGGGAGGAAGATTCA 61.626 60.000 1.29 0.00 41.22 2.57
3099 3507 0.253044 CGCCAGGGAGGAAGATTCAA 59.747 55.000 0.00 0.00 41.22 2.69
3100 3508 1.745141 CGCCAGGGAGGAAGATTCAAG 60.745 57.143 0.00 0.00 41.22 3.02
3101 3509 2.021208 GCCAGGGAGGAAGATTCAAGC 61.021 57.143 0.00 0.00 41.22 4.01
3102 3510 1.661341 CAGGGAGGAAGATTCAAGCG 58.339 55.000 0.00 0.00 0.00 4.68
3103 3511 0.543749 AGGGAGGAAGATTCAAGCGG 59.456 55.000 0.00 0.00 0.00 5.52
3104 3512 0.541863 GGGAGGAAGATTCAAGCGGA 59.458 55.000 0.00 0.00 0.00 5.54
3105 3513 1.141858 GGGAGGAAGATTCAAGCGGAT 59.858 52.381 0.00 0.00 0.00 4.18
3106 3514 2.368875 GGGAGGAAGATTCAAGCGGATA 59.631 50.000 0.00 0.00 0.00 2.59
3107 3515 3.556004 GGGAGGAAGATTCAAGCGGATAG 60.556 52.174 0.00 0.00 0.00 2.08
3108 3516 3.556004 GGAGGAAGATTCAAGCGGATAGG 60.556 52.174 0.00 0.00 0.00 2.57
3109 3517 2.147150 GGAAGATTCAAGCGGATAGGC 58.853 52.381 0.00 0.00 0.00 3.93
3111 3519 2.540265 AGATTCAAGCGGATAGGCTG 57.460 50.000 0.00 0.00 43.93 4.85
3112 3520 1.071385 AGATTCAAGCGGATAGGCTGG 59.929 52.381 0.00 0.00 43.93 4.85
3113 3521 0.109342 ATTCAAGCGGATAGGCTGGG 59.891 55.000 0.00 0.00 43.93 4.45
3114 3522 0.980754 TTCAAGCGGATAGGCTGGGA 60.981 55.000 0.00 0.00 43.93 4.37
3115 3523 1.227674 CAAGCGGATAGGCTGGGAC 60.228 63.158 0.00 0.00 43.93 4.46
3116 3524 1.689233 AAGCGGATAGGCTGGGACA 60.689 57.895 0.00 0.00 43.93 4.02
3117 3525 1.972660 AAGCGGATAGGCTGGGACAC 61.973 60.000 0.00 0.00 43.93 3.67
3118 3526 2.435693 GCGGATAGGCTGGGACACT 61.436 63.158 0.00 0.00 0.00 3.55
3119 3527 1.443407 CGGATAGGCTGGGACACTG 59.557 63.158 0.00 0.00 0.00 3.66
3120 3528 1.832912 GGATAGGCTGGGACACTGG 59.167 63.158 0.00 0.00 0.00 4.00
3121 3529 1.700042 GGATAGGCTGGGACACTGGG 61.700 65.000 0.00 0.00 0.00 4.45
3122 3530 2.330924 GATAGGCTGGGACACTGGGC 62.331 65.000 0.00 0.00 0.00 5.36
3123 3531 3.863114 TAGGCTGGGACACTGGGCA 62.863 63.158 0.00 0.00 0.00 5.36
3124 3532 4.729918 GGCTGGGACACTGGGCAG 62.730 72.222 0.00 0.00 0.00 4.85
3125 3533 3.640407 GCTGGGACACTGGGCAGA 61.640 66.667 0.00 0.00 0.00 4.26
3126 3534 2.976490 GCTGGGACACTGGGCAGAT 61.976 63.158 0.00 0.00 0.00 2.90
3127 3535 1.626356 GCTGGGACACTGGGCAGATA 61.626 60.000 0.00 0.00 0.00 1.98
3128 3536 1.135094 CTGGGACACTGGGCAGATAT 58.865 55.000 0.00 0.00 0.00 1.63
3129 3537 0.839277 TGGGACACTGGGCAGATATG 59.161 55.000 0.00 0.00 0.00 1.78
3130 3538 0.109342 GGGACACTGGGCAGATATGG 59.891 60.000 0.00 0.00 0.00 2.74
3131 3539 0.536006 GGACACTGGGCAGATATGGC 60.536 60.000 5.12 5.12 0.00 4.40
3132 3540 0.471617 GACACTGGGCAGATATGGCT 59.528 55.000 14.02 0.00 34.52 4.75
3133 3541 0.182061 ACACTGGGCAGATATGGCTG 59.818 55.000 14.02 6.95 38.91 4.85
3134 3542 0.182061 CACTGGGCAGATATGGCTGT 59.818 55.000 14.02 10.08 38.17 4.40
3135 3543 0.182061 ACTGGGCAGATATGGCTGTG 59.818 55.000 14.02 6.79 38.17 3.66
3136 3544 0.471191 CTGGGCAGATATGGCTGTGA 59.529 55.000 14.02 0.00 38.17 3.58
3137 3545 1.073444 CTGGGCAGATATGGCTGTGAT 59.927 52.381 14.02 0.00 38.17 3.06
3138 3546 2.303890 CTGGGCAGATATGGCTGTGATA 59.696 50.000 14.02 0.00 38.17 2.15
3139 3547 2.710471 TGGGCAGATATGGCTGTGATAA 59.290 45.455 14.02 0.00 38.17 1.75
3140 3548 3.331591 TGGGCAGATATGGCTGTGATAAT 59.668 43.478 14.02 0.00 38.17 1.28
3141 3549 3.693085 GGGCAGATATGGCTGTGATAATG 59.307 47.826 14.02 0.00 38.17 1.90
3142 3550 3.693085 GGCAGATATGGCTGTGATAATGG 59.307 47.826 6.65 0.00 38.17 3.16
3143 3551 3.693085 GCAGATATGGCTGTGATAATGGG 59.307 47.826 0.00 0.00 38.17 4.00
3144 3552 3.693085 CAGATATGGCTGTGATAATGGGC 59.307 47.826 0.00 0.00 0.00 5.36
3145 3553 3.331591 AGATATGGCTGTGATAATGGGCA 59.668 43.478 0.00 0.00 38.52 5.36
3146 3554 1.991121 ATGGCTGTGATAATGGGCAG 58.009 50.000 0.00 0.00 37.64 4.85
3147 3555 0.106569 TGGCTGTGATAATGGGCAGG 60.107 55.000 0.00 0.00 0.00 4.85
3148 3556 0.825010 GGCTGTGATAATGGGCAGGG 60.825 60.000 0.00 0.00 0.00 4.45
3149 3557 0.183492 GCTGTGATAATGGGCAGGGA 59.817 55.000 0.00 0.00 0.00 4.20
3150 3558 1.816961 GCTGTGATAATGGGCAGGGAG 60.817 57.143 0.00 0.00 0.00 4.30
3151 3559 0.846015 TGTGATAATGGGCAGGGAGG 59.154 55.000 0.00 0.00 0.00 4.30
3152 3560 0.111253 GTGATAATGGGCAGGGAGGG 59.889 60.000 0.00 0.00 0.00 4.30
3153 3561 0.029163 TGATAATGGGCAGGGAGGGA 60.029 55.000 0.00 0.00 0.00 4.20
3154 3562 0.695347 GATAATGGGCAGGGAGGGAG 59.305 60.000 0.00 0.00 0.00 4.30
3155 3563 0.271927 ATAATGGGCAGGGAGGGAGA 59.728 55.000 0.00 0.00 0.00 3.71
3156 3564 0.271927 TAATGGGCAGGGAGGGAGAT 59.728 55.000 0.00 0.00 0.00 2.75
3157 3565 1.358830 AATGGGCAGGGAGGGAGATG 61.359 60.000 0.00 0.00 0.00 2.90
3158 3566 3.174265 GGGCAGGGAGGGAGATGG 61.174 72.222 0.00 0.00 0.00 3.51
3159 3567 3.174265 GGCAGGGAGGGAGATGGG 61.174 72.222 0.00 0.00 0.00 4.00
3160 3568 2.040464 GCAGGGAGGGAGATGGGA 60.040 66.667 0.00 0.00 0.00 4.37
3161 3569 1.694169 GCAGGGAGGGAGATGGGAA 60.694 63.158 0.00 0.00 0.00 3.97
3162 3570 1.064824 GCAGGGAGGGAGATGGGAAT 61.065 60.000 0.00 0.00 0.00 3.01
3163 3571 0.769873 CAGGGAGGGAGATGGGAATG 59.230 60.000 0.00 0.00 0.00 2.67
3164 3572 0.402566 AGGGAGGGAGATGGGAATGG 60.403 60.000 0.00 0.00 0.00 3.16
3165 3573 0.699231 GGGAGGGAGATGGGAATGGT 60.699 60.000 0.00 0.00 0.00 3.55
3166 3574 0.475906 GGAGGGAGATGGGAATGGTG 59.524 60.000 0.00 0.00 0.00 4.17
3167 3575 0.475906 GAGGGAGATGGGAATGGTGG 59.524 60.000 0.00 0.00 0.00 4.61
3168 3576 1.152673 GGGAGATGGGAATGGTGGC 60.153 63.158 0.00 0.00 0.00 5.01
3169 3577 1.152673 GGAGATGGGAATGGTGGCC 60.153 63.158 0.00 0.00 0.00 5.36
3170 3578 1.614711 GAGATGGGAATGGTGGCCA 59.385 57.895 0.00 0.00 38.19 5.36
3185 3593 3.159298 GCCATTGGCGAGAAGAAGA 57.841 52.632 12.82 0.00 39.62 2.87
3186 3594 1.673168 GCCATTGGCGAGAAGAAGAT 58.327 50.000 12.82 0.00 39.62 2.40
3187 3595 1.601430 GCCATTGGCGAGAAGAAGATC 59.399 52.381 12.82 0.00 39.62 2.75
3188 3596 2.216898 CCATTGGCGAGAAGAAGATCC 58.783 52.381 0.00 0.00 0.00 3.36
3189 3597 2.420547 CCATTGGCGAGAAGAAGATCCA 60.421 50.000 0.00 0.00 0.00 3.41
3190 3598 2.680312 TTGGCGAGAAGAAGATCCAG 57.320 50.000 0.00 0.00 0.00 3.86
3191 3599 1.561643 TGGCGAGAAGAAGATCCAGT 58.438 50.000 0.00 0.00 0.00 4.00
3192 3600 1.478510 TGGCGAGAAGAAGATCCAGTC 59.521 52.381 0.00 0.00 0.00 3.51
3193 3601 1.754226 GGCGAGAAGAAGATCCAGTCT 59.246 52.381 0.00 0.00 39.43 3.24
3194 3602 2.481104 GGCGAGAAGAAGATCCAGTCTG 60.481 54.545 0.00 0.00 37.23 3.51
3195 3603 2.481104 GCGAGAAGAAGATCCAGTCTGG 60.481 54.545 13.21 13.21 37.23 3.86
3196 3604 2.100584 CGAGAAGAAGATCCAGTCTGGG 59.899 54.545 19.11 0.53 38.32 4.45
3197 3605 3.370104 GAGAAGAAGATCCAGTCTGGGA 58.630 50.000 19.11 6.28 42.21 4.37
3206 3614 2.121948 TCCAGTCTGGGATGAAGATGG 58.878 52.381 19.11 0.00 38.32 3.51
3207 3615 1.142465 CCAGTCTGGGATGAAGATGGG 59.858 57.143 11.46 0.00 32.67 4.00
3208 3616 2.121948 CAGTCTGGGATGAAGATGGGA 58.878 52.381 0.00 0.00 0.00 4.37
3209 3617 2.507058 CAGTCTGGGATGAAGATGGGAA 59.493 50.000 0.00 0.00 0.00 3.97
3210 3618 2.776536 AGTCTGGGATGAAGATGGGAAG 59.223 50.000 0.00 0.00 0.00 3.46
3211 3619 2.130193 TCTGGGATGAAGATGGGAAGG 58.870 52.381 0.00 0.00 0.00 3.46
3212 3620 1.849039 CTGGGATGAAGATGGGAAGGT 59.151 52.381 0.00 0.00 0.00 3.50
3213 3621 1.565759 TGGGATGAAGATGGGAAGGTG 59.434 52.381 0.00 0.00 0.00 4.00
3214 3622 1.133668 GGGATGAAGATGGGAAGGTGG 60.134 57.143 0.00 0.00 0.00 4.61
3215 3623 1.685148 GATGAAGATGGGAAGGTGGC 58.315 55.000 0.00 0.00 0.00 5.01
3216 3624 1.213926 GATGAAGATGGGAAGGTGGCT 59.786 52.381 0.00 0.00 0.00 4.75
3217 3625 0.329261 TGAAGATGGGAAGGTGGCTG 59.671 55.000 0.00 0.00 0.00 4.85
3218 3626 1.000396 AAGATGGGAAGGTGGCTGC 60.000 57.895 0.00 0.00 0.00 5.25
3219 3627 2.440980 GATGGGAAGGTGGCTGCC 60.441 66.667 12.87 12.87 0.00 4.85
3220 3628 3.267233 ATGGGAAGGTGGCTGCCA 61.267 61.111 19.30 19.30 38.80 4.92
3221 3629 2.786512 GATGGGAAGGTGGCTGCCAA 62.787 60.000 25.23 6.13 37.87 4.52
3222 3630 2.991540 GGGAAGGTGGCTGCCAAC 60.992 66.667 29.03 29.03 42.50 3.77
3223 3631 2.203480 GGAAGGTGGCTGCCAACA 60.203 61.111 35.93 6.26 45.07 3.33
3224 3632 1.832167 GGAAGGTGGCTGCCAACAA 60.832 57.895 35.93 5.84 45.07 2.83
3225 3633 1.662044 GAAGGTGGCTGCCAACAAG 59.338 57.895 35.93 0.00 45.07 3.16
3226 3634 1.809567 GAAGGTGGCTGCCAACAAGG 61.810 60.000 35.93 0.00 45.07 3.61
3227 3635 2.203480 GGTGGCTGCCAACAAGGA 60.203 61.111 30.95 0.00 41.64 3.36
3228 3636 1.832167 GGTGGCTGCCAACAAGGAA 60.832 57.895 30.95 0.00 41.64 3.36
3234 3642 3.827505 TGCCAACAAGGAAGAAGCT 57.172 47.368 0.00 0.00 41.22 3.74
3235 3643 1.609208 TGCCAACAAGGAAGAAGCTC 58.391 50.000 0.00 0.00 41.22 4.09
3236 3644 1.143684 TGCCAACAAGGAAGAAGCTCT 59.856 47.619 0.00 0.00 41.22 4.09
3237 3645 1.538950 GCCAACAAGGAAGAAGCTCTG 59.461 52.381 0.00 0.00 41.22 3.35
3238 3646 2.157738 CCAACAAGGAAGAAGCTCTGG 58.842 52.381 0.00 0.00 41.22 3.86
3239 3647 2.157738 CAACAAGGAAGAAGCTCTGGG 58.842 52.381 0.00 0.00 0.00 4.45
3240 3648 0.037447 ACAAGGAAGAAGCTCTGGGC 59.963 55.000 0.00 0.00 42.19 5.36
3241 3649 0.037303 CAAGGAAGAAGCTCTGGGCA 59.963 55.000 0.74 0.00 44.79 5.36
3242 3650 0.327591 AAGGAAGAAGCTCTGGGCAG 59.672 55.000 0.74 0.00 44.79 4.85
3243 3651 1.077858 GGAAGAAGCTCTGGGCAGG 60.078 63.158 0.74 0.00 44.79 4.85
3244 3652 1.077858 GAAGAAGCTCTGGGCAGGG 60.078 63.158 0.74 0.00 44.79 4.45
3245 3653 1.539869 AAGAAGCTCTGGGCAGGGA 60.540 57.895 0.74 0.00 44.79 4.20
3246 3654 1.560866 AAGAAGCTCTGGGCAGGGAG 61.561 60.000 0.74 0.00 44.79 4.30
3247 3655 1.992277 GAAGCTCTGGGCAGGGAGA 60.992 63.158 0.74 0.00 44.79 3.71
3248 3656 1.539869 AAGCTCTGGGCAGGGAGAA 60.540 57.895 0.74 0.00 44.79 2.87
3249 3657 1.136329 AAGCTCTGGGCAGGGAGAAA 61.136 55.000 0.74 0.00 44.79 2.52
3250 3658 1.077858 GCTCTGGGCAGGGAGAAAG 60.078 63.158 0.00 0.00 41.35 2.62
3251 3659 1.557269 GCTCTGGGCAGGGAGAAAGA 61.557 60.000 0.00 0.00 41.35 2.52
3252 3660 1.211456 CTCTGGGCAGGGAGAAAGAT 58.789 55.000 0.00 0.00 0.00 2.40
3253 3661 0.914644 TCTGGGCAGGGAGAAAGATG 59.085 55.000 0.00 0.00 0.00 2.90
3254 3662 0.106819 CTGGGCAGGGAGAAAGATGG 60.107 60.000 0.00 0.00 0.00 3.51
3255 3663 0.549902 TGGGCAGGGAGAAAGATGGA 60.550 55.000 0.00 0.00 0.00 3.41
3373 3781 2.431430 CTGTTCTGCAGCGCTCGA 60.431 61.111 7.13 0.82 38.52 4.04
3647 4070 3.574396 TCTCCATATCGGTGCTTCTTAGG 59.426 47.826 0.00 0.00 35.57 2.69
3654 4077 1.383523 GGTGCTTCTTAGGATGGCAC 58.616 55.000 18.47 18.47 43.64 5.01
3713 4139 4.137543 CTGCTACCAAATTGACCCCTATC 58.862 47.826 0.00 0.00 0.00 2.08
3763 4198 3.094572 AGCAAATCAAACCCTGGATCAG 58.905 45.455 0.00 0.00 0.00 2.90
4207 4644 3.119708 GGAGTGCTGCACCTTTCTAAATG 60.120 47.826 27.74 0.00 34.49 2.32
4217 4654 5.801947 GCACCTTTCTAAATGTGTGCATTAG 59.198 40.000 14.69 0.00 46.16 1.73
4262 4700 2.038820 CCAACCACCCTGATTTTTGCAT 59.961 45.455 0.00 0.00 0.00 3.96
4445 4891 7.772292 TCATGCTTCAGCTTTCAATTATAGTCT 59.228 33.333 0.00 0.00 42.66 3.24
4704 5159 7.067494 ACAAAGGCATGTTACATTCTCTATTCC 59.933 37.037 0.00 0.00 0.00 3.01
4705 5160 5.625150 AGGCATGTTACATTCTCTATTCCC 58.375 41.667 0.00 0.00 0.00 3.97
4707 5162 6.006449 GGCATGTTACATTCTCTATTCCCAT 58.994 40.000 0.00 0.00 0.00 4.00
4708 5163 6.072286 GGCATGTTACATTCTCTATTCCCATG 60.072 42.308 0.00 0.00 0.00 3.66
4709 5164 6.072286 GCATGTTACATTCTCTATTCCCATGG 60.072 42.308 4.14 4.14 0.00 3.66
4710 5165 6.823286 TGTTACATTCTCTATTCCCATGGA 57.177 37.500 15.22 0.00 0.00 3.41
4718 5176 6.901615 TCTCTATTCCCATGGAGGTTTTTA 57.098 37.500 15.22 0.00 38.32 1.52
5259 5731 1.196766 ATGTGCTCTGGAGGCAGTCA 61.197 55.000 0.00 0.00 40.54 3.41
5326 5800 1.863155 AAGGGTGGCGGGTCATCATT 61.863 55.000 0.00 0.00 0.00 2.57
5329 5803 0.815615 GGTGGCGGGTCATCATTCTC 60.816 60.000 0.00 0.00 0.00 2.87
5337 5811 2.555199 GGTCATCATTCTCGGGTTCTG 58.445 52.381 0.00 0.00 0.00 3.02
5358 5832 5.487488 TCTGGTGGACTGTCCTATGTATTTT 59.513 40.000 26.03 0.00 37.46 1.82
5360 5834 6.177610 TGGTGGACTGTCCTATGTATTTTTC 58.822 40.000 26.03 0.00 37.46 2.29
5364 5838 8.793592 GTGGACTGTCCTATGTATTTTTCTTTT 58.206 33.333 26.03 0.00 37.46 2.27
5365 5839 9.362151 TGGACTGTCCTATGTATTTTTCTTTTT 57.638 29.630 26.03 0.00 37.46 1.94
5366 5840 9.626045 GGACTGTCCTATGTATTTTTCTTTTTG 57.374 33.333 19.53 0.00 32.53 2.44
5378 5852 9.489393 GTATTTTTCTTTTTGAAACAGGCAAAG 57.511 29.630 0.00 0.00 43.55 2.77
5396 5870 5.956171 CAAAGTTTGCTTCAACTCTTTCC 57.044 39.130 1.96 0.00 33.01 3.13
5397 5871 3.971032 AGTTTGCTTCAACTCTTTCCG 57.029 42.857 0.00 0.00 0.00 4.30
5400 5874 1.878953 TGCTTCAACTCTTTCCGGTC 58.121 50.000 0.00 0.00 0.00 4.79
5401 5875 1.140052 TGCTTCAACTCTTTCCGGTCA 59.860 47.619 0.00 0.00 0.00 4.02
5402 5876 2.224523 TGCTTCAACTCTTTCCGGTCAT 60.225 45.455 0.00 0.00 0.00 3.06
5403 5877 2.416893 GCTTCAACTCTTTCCGGTCATC 59.583 50.000 0.00 0.00 0.00 2.92
5404 5878 2.762535 TCAACTCTTTCCGGTCATCC 57.237 50.000 0.00 0.00 0.00 3.51
5405 5879 1.278127 TCAACTCTTTCCGGTCATCCC 59.722 52.381 0.00 0.00 0.00 3.85
5406 5880 0.618981 AACTCTTTCCGGTCATCCCC 59.381 55.000 0.00 0.00 0.00 4.81
5407 5881 1.272554 ACTCTTTCCGGTCATCCCCC 61.273 60.000 0.00 0.00 0.00 5.40
5421 5895 2.043652 CCCCCAGCCCATGAACAG 60.044 66.667 0.00 0.00 0.00 3.16
5422 5896 2.615465 CCCCCAGCCCATGAACAGA 61.615 63.158 0.00 0.00 0.00 3.41
5423 5897 1.383799 CCCCAGCCCATGAACAGAA 59.616 57.895 0.00 0.00 0.00 3.02
5424 5898 0.967380 CCCCAGCCCATGAACAGAAC 60.967 60.000 0.00 0.00 0.00 3.01
5425 5899 0.251297 CCCAGCCCATGAACAGAACA 60.251 55.000 0.00 0.00 0.00 3.18
5426 5900 1.619654 CCAGCCCATGAACAGAACAA 58.380 50.000 0.00 0.00 0.00 2.83
5427 5901 1.270550 CCAGCCCATGAACAGAACAAC 59.729 52.381 0.00 0.00 0.00 3.32
5428 5902 2.233271 CAGCCCATGAACAGAACAACT 58.767 47.619 0.00 0.00 0.00 3.16
5430 5904 3.438087 CAGCCCATGAACAGAACAACTAG 59.562 47.826 0.00 0.00 0.00 2.57
5431 5905 3.327757 AGCCCATGAACAGAACAACTAGA 59.672 43.478 0.00 0.00 0.00 2.43
5432 5906 4.018960 AGCCCATGAACAGAACAACTAGAT 60.019 41.667 0.00 0.00 0.00 1.98
5434 5908 5.880332 GCCCATGAACAGAACAACTAGATAA 59.120 40.000 0.00 0.00 0.00 1.75
5435 5909 6.374333 GCCCATGAACAGAACAACTAGATAAA 59.626 38.462 0.00 0.00 0.00 1.40
5436 5910 7.626452 GCCCATGAACAGAACAACTAGATAAAC 60.626 40.741 0.00 0.00 0.00 2.01
5437 5911 7.607991 CCCATGAACAGAACAACTAGATAAACT 59.392 37.037 0.00 0.00 0.00 2.66
5443 5917 9.503399 AACAGAACAACTAGATAAACTAAAGGG 57.497 33.333 0.00 0.00 0.00 3.95
5444 5918 7.606839 ACAGAACAACTAGATAAACTAAAGGGC 59.393 37.037 0.00 0.00 0.00 5.19
5445 5919 7.606456 CAGAACAACTAGATAAACTAAAGGGCA 59.394 37.037 0.00 0.00 0.00 5.36
5446 5920 8.329502 AGAACAACTAGATAAACTAAAGGGCAT 58.670 33.333 0.00 0.00 0.00 4.40
5447 5921 7.865706 ACAACTAGATAAACTAAAGGGCATG 57.134 36.000 0.00 0.00 0.00 4.06
5448 5922 6.318900 ACAACTAGATAAACTAAAGGGCATGC 59.681 38.462 9.90 9.90 0.00 4.06
5449 5923 6.001449 ACTAGATAAACTAAAGGGCATGCA 57.999 37.500 21.36 0.00 0.00 3.96
5452 5926 5.016173 AGATAAACTAAAGGGCATGCAACA 58.984 37.500 21.36 0.00 0.00 3.33
5454 5928 2.584835 ACTAAAGGGCATGCAACAGA 57.415 45.000 21.36 0.01 0.00 3.41
5455 5929 2.875296 ACTAAAGGGCATGCAACAGAA 58.125 42.857 21.36 0.00 0.00 3.02
5456 5930 3.434309 ACTAAAGGGCATGCAACAGAAT 58.566 40.909 21.36 0.93 0.00 2.40
5457 5931 3.834231 ACTAAAGGGCATGCAACAGAATT 59.166 39.130 21.36 6.67 0.00 2.17
5458 5932 2.754946 AAGGGCATGCAACAGAATTG 57.245 45.000 21.36 0.00 0.00 2.32
5459 5933 1.636148 AGGGCATGCAACAGAATTGT 58.364 45.000 21.36 0.00 39.87 2.71
5461 5935 3.164268 AGGGCATGCAACAGAATTGTTA 58.836 40.909 21.36 0.00 45.53 2.41
5462 5936 3.577848 AGGGCATGCAACAGAATTGTTAA 59.422 39.130 21.36 0.00 45.53 2.01
5463 5937 4.223477 AGGGCATGCAACAGAATTGTTAAT 59.777 37.500 21.36 0.00 45.53 1.40
5464 5938 4.937015 GGGCATGCAACAGAATTGTTAATT 59.063 37.500 21.36 0.00 45.53 1.40
5465 5939 6.070881 AGGGCATGCAACAGAATTGTTAATTA 60.071 34.615 21.36 0.00 45.53 1.40
5468 5942 7.166168 GCATGCAACAGAATTGTTAATTAACG 58.834 34.615 20.51 9.69 45.53 3.18
5469 5943 7.665471 CATGCAACAGAATTGTTAATTAACGG 58.335 34.615 20.51 9.89 45.53 4.44
5471 5945 7.426410 TGCAACAGAATTGTTAATTAACGGAA 58.574 30.769 20.51 12.29 45.53 4.30
5473 5947 8.756864 GCAACAGAATTGTTAATTAACGGAAAA 58.243 29.630 20.51 11.36 45.53 2.29
5476 5950 9.974980 ACAGAATTGTTAATTAACGGAAAACAT 57.025 25.926 20.51 5.34 39.00 2.71
5478 5952 8.921670 AGAATTGTTAATTAACGGAAAACATGC 58.078 29.630 20.51 5.58 39.00 4.06
5479 5953 7.589574 ATTGTTAATTAACGGAAAACATGCC 57.410 32.000 20.51 0.00 39.00 4.40
5481 5955 6.692486 TGTTAATTAACGGAAAACATGCCAT 58.308 32.000 20.51 0.00 39.00 4.40
5482 5956 6.809196 TGTTAATTAACGGAAAACATGCCATC 59.191 34.615 20.51 0.00 39.00 3.51
5483 5957 5.398603 AATTAACGGAAAACATGCCATCA 57.601 34.783 0.00 0.00 0.00 3.07
5484 5958 2.723124 AACGGAAAACATGCCATCAC 57.277 45.000 0.00 0.00 0.00 3.06
5485 5959 1.614996 ACGGAAAACATGCCATCACA 58.385 45.000 0.00 0.00 0.00 3.58
5486 5960 2.170166 ACGGAAAACATGCCATCACAT 58.830 42.857 0.00 0.00 0.00 3.21
5496 5970 2.861274 TGCCATCACATGAACAGAACA 58.139 42.857 0.00 0.00 0.00 3.18
5497 5971 2.553602 TGCCATCACATGAACAGAACAC 59.446 45.455 0.00 0.00 0.00 3.32
5499 5973 3.192001 GCCATCACATGAACAGAACACAT 59.808 43.478 0.00 0.00 0.00 3.21
5501 5975 5.674569 GCCATCACATGAACAGAACACATAC 60.675 44.000 0.00 0.00 0.00 2.39
5502 5976 5.645067 CCATCACATGAACAGAACACATACT 59.355 40.000 0.00 0.00 0.00 2.12
5503 5977 6.183360 CCATCACATGAACAGAACACATACTC 60.183 42.308 0.00 0.00 0.00 2.59
5504 5978 5.237815 TCACATGAACAGAACACATACTCC 58.762 41.667 0.00 0.00 0.00 3.85
5505 5979 4.393062 CACATGAACAGAACACATACTCCC 59.607 45.833 0.00 0.00 0.00 4.30
5506 5980 4.287067 ACATGAACAGAACACATACTCCCT 59.713 41.667 0.00 0.00 0.00 4.20
5508 5982 4.160329 TGAACAGAACACATACTCCCTCT 58.840 43.478 0.00 0.00 0.00 3.69
5509 5983 4.021104 TGAACAGAACACATACTCCCTCTG 60.021 45.833 0.00 0.00 37.04 3.35
5512 5986 4.463186 ACAGAACACATACTCCCTCTGTAC 59.537 45.833 0.84 0.00 41.19 2.90
5513 5987 4.024670 AGAACACATACTCCCTCTGTACC 58.975 47.826 0.00 0.00 0.00 3.34
5514 5988 2.376109 ACACATACTCCCTCTGTACCG 58.624 52.381 0.00 0.00 0.00 4.02
5515 5989 2.025605 ACACATACTCCCTCTGTACCGA 60.026 50.000 0.00 0.00 0.00 4.69
5516 5990 3.021695 CACATACTCCCTCTGTACCGAA 58.978 50.000 0.00 0.00 0.00 4.30
5517 5991 3.446161 CACATACTCCCTCTGTACCGAAA 59.554 47.826 0.00 0.00 0.00 3.46
5518 5992 4.099573 CACATACTCCCTCTGTACCGAAAT 59.900 45.833 0.00 0.00 0.00 2.17
5519 5993 5.301045 CACATACTCCCTCTGTACCGAAATA 59.699 44.000 0.00 0.00 0.00 1.40
5520 5994 5.301298 ACATACTCCCTCTGTACCGAAATAC 59.699 44.000 0.00 0.00 0.00 1.89
5521 5995 3.705051 ACTCCCTCTGTACCGAAATACA 58.295 45.455 0.00 0.00 33.96 2.29
5522 5996 4.287552 ACTCCCTCTGTACCGAAATACAT 58.712 43.478 0.00 0.00 34.59 2.29
5524 5998 4.028131 TCCCTCTGTACCGAAATACATGT 58.972 43.478 2.69 2.69 34.59 3.21
5526 6000 4.042398 CCTCTGTACCGAAATACATGTCG 58.958 47.826 0.00 0.00 34.59 4.35
5527 6001 3.441163 TCTGTACCGAAATACATGTCGC 58.559 45.455 0.00 0.00 34.59 5.19
5528 6002 3.129813 TCTGTACCGAAATACATGTCGCT 59.870 43.478 0.00 0.00 34.59 4.93
5529 6003 3.183754 TGTACCGAAATACATGTCGCTG 58.816 45.455 0.00 0.00 35.93 5.18
5530 6004 1.651987 ACCGAAATACATGTCGCTGG 58.348 50.000 0.00 1.83 35.93 4.85
5531 6005 1.206132 ACCGAAATACATGTCGCTGGA 59.794 47.619 0.00 0.00 35.93 3.86
5533 6007 2.540515 CGAAATACATGTCGCTGGAGT 58.459 47.619 0.00 0.00 0.00 3.85
5534 6008 3.490249 CCGAAATACATGTCGCTGGAGTA 60.490 47.826 0.00 0.00 35.93 2.59
5535 6009 3.731216 CGAAATACATGTCGCTGGAGTAG 59.269 47.826 0.00 0.00 0.00 2.57
5565 6039 2.802787 GCTACTCCAGCGACATGTAT 57.197 50.000 0.00 0.00 41.37 2.29
5567 6041 3.458189 GCTACTCCAGCGACATGTATTT 58.542 45.455 0.00 0.00 41.37 1.40
5568 6042 3.491267 GCTACTCCAGCGACATGTATTTC 59.509 47.826 0.00 0.00 41.37 2.17
5571 6045 1.206132 TCCAGCGACATGTATTTCGGT 59.794 47.619 0.00 0.07 46.29 4.69
5572 6046 2.427812 TCCAGCGACATGTATTTCGGTA 59.572 45.455 8.74 0.00 43.70 4.02
5575 6049 3.242944 CAGCGACATGTATTTCGGTACAG 59.757 47.826 8.74 0.00 43.70 2.74
5576 6050 3.129813 AGCGACATGTATTTCGGTACAGA 59.870 43.478 7.49 0.00 43.71 3.41
5577 6051 3.486108 GCGACATGTATTTCGGTACAGAG 59.514 47.826 0.00 0.00 37.93 3.35
5578 6052 4.042398 CGACATGTATTTCGGTACAGAGG 58.958 47.826 0.00 0.00 37.93 3.69
5579 6053 4.369182 GACATGTATTTCGGTACAGAGGG 58.631 47.826 0.00 0.00 37.93 4.30
5580 6054 4.028131 ACATGTATTTCGGTACAGAGGGA 58.972 43.478 0.00 0.00 37.93 4.20
5582 6056 3.705051 TGTATTTCGGTACAGAGGGAGT 58.295 45.455 0.00 0.00 31.33 3.85
5583 6057 4.858850 TGTATTTCGGTACAGAGGGAGTA 58.141 43.478 0.00 0.00 31.33 2.59
5584 6058 4.641989 TGTATTTCGGTACAGAGGGAGTAC 59.358 45.833 0.00 0.00 40.78 2.73
5585 6059 2.885135 TTCGGTACAGAGGGAGTACA 57.115 50.000 0.00 0.00 42.73 2.90
5586 6060 3.377253 TTCGGTACAGAGGGAGTACAT 57.623 47.619 0.00 0.00 42.73 2.29
5587 6061 2.651455 TCGGTACAGAGGGAGTACATG 58.349 52.381 0.00 0.00 42.73 3.21
5588 6062 1.067212 CGGTACAGAGGGAGTACATGC 59.933 57.143 0.00 0.00 42.73 4.06
5589 6063 2.389715 GGTACAGAGGGAGTACATGCT 58.610 52.381 0.00 0.00 42.73 3.79
5590 6064 3.563223 GGTACAGAGGGAGTACATGCTA 58.437 50.000 0.00 0.00 42.73 3.49
5591 6065 4.153411 GGTACAGAGGGAGTACATGCTAT 58.847 47.826 0.00 0.00 42.73 2.97
5593 6067 5.416326 GGTACAGAGGGAGTACATGCTATAG 59.584 48.000 0.00 0.00 42.73 1.31
5595 6069 5.898120 ACAGAGGGAGTACATGCTATAGAT 58.102 41.667 3.21 0.00 0.00 1.98
5596 6070 5.714333 ACAGAGGGAGTACATGCTATAGATG 59.286 44.000 3.21 7.21 0.00 2.90
5597 6071 4.709397 AGAGGGAGTACATGCTATAGATGC 59.291 45.833 3.21 0.00 0.00 3.91
5598 6072 3.445450 AGGGAGTACATGCTATAGATGCG 59.555 47.826 3.21 0.00 0.00 4.73
5599 6073 3.444034 GGGAGTACATGCTATAGATGCGA 59.556 47.826 3.21 0.00 0.00 5.10
5600 6074 4.439426 GGGAGTACATGCTATAGATGCGAG 60.439 50.000 3.21 0.00 0.00 5.03
5607 7161 6.691508 ACATGCTATAGATGCGAGTAAATCA 58.308 36.000 3.21 0.00 0.00 2.57
5610 7164 7.408132 TGCTATAGATGCGAGTAAATCAAAC 57.592 36.000 3.21 0.00 0.00 2.93
5612 7166 6.423905 GCTATAGATGCGAGTAAATCAAACCA 59.576 38.462 3.21 0.00 0.00 3.67
5678 7232 3.755378 CACTTGGCAGAAATCTAAGCAGT 59.245 43.478 0.00 0.00 0.00 4.40
5681 7235 2.305635 TGGCAGAAATCTAAGCAGTGGA 59.694 45.455 0.00 0.00 0.00 4.02
5691 7245 5.227569 TCTAAGCAGTGGAAACAGAATGA 57.772 39.130 0.00 0.00 44.46 2.57
5709 7263 8.301002 ACAGAATGAAAGTACTCAGTAGTCTTC 58.699 37.037 0.00 1.11 39.69 2.87
5721 7275 2.299013 AGTAGTCTTCGCACCAATCACA 59.701 45.455 0.00 0.00 0.00 3.58
5741 7299 7.072263 TCACAGAGAAAGAAGGAGAAATTCT 57.928 36.000 0.00 0.00 38.65 2.40
5800 7359 6.583912 CGAGGAATTAGAATTCGTTGCTTA 57.416 37.500 10.58 0.00 44.43 3.09
5828 7387 6.636454 AGACATAGAGATTTGTTTACCCCA 57.364 37.500 0.00 0.00 0.00 4.96
5849 7408 0.178533 TTCAAACTCCCGACACGGTT 59.821 50.000 9.28 0.00 46.80 4.44
5919 7478 1.004440 GCCTTGTTCTCCGTGAGCT 60.004 57.895 0.00 0.00 0.00 4.09
5946 7505 2.162681 CTTGAACTCACCCAATCACCC 58.837 52.381 0.00 0.00 0.00 4.61
5974 7533 2.787473 TCTTGCGGTGATCTTTGGAT 57.213 45.000 0.00 0.00 34.45 3.41
6024 7583 5.823209 CACATGATGGATGCTCTTAAACA 57.177 39.130 0.00 0.00 35.15 2.83
6030 7589 1.810151 GGATGCTCTTAAACAACGCCA 59.190 47.619 0.00 0.00 0.00 5.69
6032 7591 2.766970 TGCTCTTAAACAACGCCAAC 57.233 45.000 0.00 0.00 0.00 3.77
6047 7607 0.249073 CCAACCGTCTAGAGGATGCG 60.249 60.000 13.99 3.41 31.17 4.73
6079 7639 0.806492 GTAGCACGTCCAAGCTAGGC 60.806 60.000 5.64 0.00 43.39 3.93
6130 7690 9.569122 TCAATAACAGTTTTAGTTCTTAGGCTT 57.431 29.630 0.00 0.00 0.00 4.35
6175 7735 1.673033 CCTCGTGTTAGTGCCAGGAAG 60.673 57.143 0.00 0.00 0.00 3.46
6176 7736 0.320374 TCGTGTTAGTGCCAGGAAGG 59.680 55.000 0.00 0.00 41.84 3.46
6180 7740 1.497286 TGTTAGTGCCAGGAAGGGTTT 59.503 47.619 0.00 0.00 38.09 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 3.007920 CCCACCTCCTGCTCAGCT 61.008 66.667 0.00 0.00 0.00 4.24
55 56 0.910088 GGTACTTGCTCCCACCTCCT 60.910 60.000 0.00 0.00 0.00 3.69
98 99 4.461431 GGTTTTATTTTCGTCCCACCTCAT 59.539 41.667 0.00 0.00 0.00 2.90
230 231 0.611062 ACCCCGTCGAGATCACTCAA 60.611 55.000 0.00 0.00 42.72 3.02
245 246 2.591715 CCATGCCGATCGAACCCC 60.592 66.667 18.66 0.00 0.00 4.95
358 359 3.700038 ACCTCTACCATCTCGATTTCGTT 59.300 43.478 0.00 0.00 40.80 3.85
546 547 1.618837 CTTTCCTTCGTCCCTCAGTCA 59.381 52.381 0.00 0.00 0.00 3.41
563 564 1.978580 TCGCTTCCTTCCCTTCTCTTT 59.021 47.619 0.00 0.00 0.00 2.52
721 722 8.180267 GTGAAAGAATCAATCACGATCAATCTT 58.820 33.333 0.00 0.00 40.50 2.40
832 833 2.553466 CCACCCCATCGGTTTAGTTTCA 60.553 50.000 0.00 0.00 45.36 2.69
845 846 4.779486 GTCCCTCCCCCACCCCAT 62.779 72.222 0.00 0.00 0.00 4.00
889 891 2.197465 GTACTTCCTTCCACCTCCCAT 58.803 52.381 0.00 0.00 0.00 4.00
900 902 8.584063 TTTTTGTACTTCTTTGGTACTTCCTT 57.416 30.769 0.00 0.00 39.89 3.36
927 930 2.656069 CGTCCCACCTCATCCGGTT 61.656 63.158 0.00 0.00 34.29 4.44
987 991 6.398234 TGAGTGAATCTCTACTCCTAATGC 57.602 41.667 0.00 0.00 41.99 3.56
1177 1183 0.796312 TGAGCTTGCGGAAATCGAAC 59.204 50.000 0.00 0.00 42.43 3.95
1226 1247 2.044620 AAGGGATGGGGAGGGGAC 59.955 66.667 0.00 0.00 0.00 4.46
1602 1671 3.073735 CGGCTCTGCTCTCCCTGT 61.074 66.667 0.00 0.00 0.00 4.00
1867 1943 0.915872 TGCTGACCATCATCCCCACT 60.916 55.000 0.00 0.00 0.00 4.00
2042 2176 5.302059 TGTGAGTACATATACAGGAAGCTCC 59.698 44.000 0.00 0.00 36.58 4.70
2271 2409 6.404623 GCAACAGGATGATTGCTAATAACACA 60.405 38.462 1.80 0.00 44.19 3.72
2327 2468 5.977489 TGGATCGATAACCTACATACAGG 57.023 43.478 0.00 0.00 41.87 4.00
2394 2535 6.092670 CACAGACATCACCATTCGAGTTAATT 59.907 38.462 0.00 0.00 0.00 1.40
2688 2873 3.070159 GCTACACAGGGATCTTCAGCATA 59.930 47.826 0.00 0.00 0.00 3.14
2790 2983 2.148916 GACCAATGTCGCCATATCGA 57.851 50.000 0.00 0.00 35.95 3.59
3006 3391 2.130193 CCTTCCCATCTTCATCCCAGA 58.870 52.381 0.00 0.00 0.00 3.86
3078 3486 2.949705 GAATCTTCCTCCCTGGCGGC 62.950 65.000 0.00 0.00 35.26 6.53
3079 3487 1.147153 GAATCTTCCTCCCTGGCGG 59.853 63.158 0.00 0.00 35.26 6.13
3080 3488 0.253044 TTGAATCTTCCTCCCTGGCG 59.747 55.000 0.00 0.00 35.26 5.69
3081 3489 2.021208 GCTTGAATCTTCCTCCCTGGC 61.021 57.143 0.00 0.00 35.26 4.85
3082 3490 1.745141 CGCTTGAATCTTCCTCCCTGG 60.745 57.143 0.00 0.00 37.10 4.45
3083 3491 1.661341 CGCTTGAATCTTCCTCCCTG 58.339 55.000 0.00 0.00 0.00 4.45
3084 3492 0.543749 CCGCTTGAATCTTCCTCCCT 59.456 55.000 0.00 0.00 0.00 4.20
3085 3493 0.541863 TCCGCTTGAATCTTCCTCCC 59.458 55.000 0.00 0.00 0.00 4.30
3086 3494 2.629336 ATCCGCTTGAATCTTCCTCC 57.371 50.000 0.00 0.00 0.00 4.30
3087 3495 3.658709 CCTATCCGCTTGAATCTTCCTC 58.341 50.000 0.00 0.00 0.00 3.71
3088 3496 2.224402 GCCTATCCGCTTGAATCTTCCT 60.224 50.000 0.00 0.00 0.00 3.36
3089 3497 2.147150 GCCTATCCGCTTGAATCTTCC 58.853 52.381 0.00 0.00 0.00 3.46
3090 3498 2.805099 CAGCCTATCCGCTTGAATCTTC 59.195 50.000 0.00 0.00 36.82 2.87
3091 3499 2.486191 CCAGCCTATCCGCTTGAATCTT 60.486 50.000 0.00 0.00 36.82 2.40
3092 3500 1.071385 CCAGCCTATCCGCTTGAATCT 59.929 52.381 0.00 0.00 36.82 2.40
3093 3501 1.517242 CCAGCCTATCCGCTTGAATC 58.483 55.000 0.00 0.00 36.82 2.52
3094 3502 0.109342 CCCAGCCTATCCGCTTGAAT 59.891 55.000 0.00 0.00 36.82 2.57
3095 3503 0.980754 TCCCAGCCTATCCGCTTGAA 60.981 55.000 0.00 0.00 36.82 2.69
3096 3504 1.382557 TCCCAGCCTATCCGCTTGA 60.383 57.895 0.00 0.00 36.82 3.02
3097 3505 1.227674 GTCCCAGCCTATCCGCTTG 60.228 63.158 0.00 0.00 36.82 4.01
3098 3506 1.689233 TGTCCCAGCCTATCCGCTT 60.689 57.895 0.00 0.00 36.82 4.68
3099 3507 2.041922 TGTCCCAGCCTATCCGCT 60.042 61.111 0.00 0.00 40.65 5.52
3100 3508 2.109181 GTGTCCCAGCCTATCCGC 59.891 66.667 0.00 0.00 0.00 5.54
3101 3509 1.443407 CAGTGTCCCAGCCTATCCG 59.557 63.158 0.00 0.00 0.00 4.18
3102 3510 1.700042 CCCAGTGTCCCAGCCTATCC 61.700 65.000 0.00 0.00 0.00 2.59
3103 3511 1.832912 CCCAGTGTCCCAGCCTATC 59.167 63.158 0.00 0.00 0.00 2.08
3104 3512 2.378634 GCCCAGTGTCCCAGCCTAT 61.379 63.158 0.00 0.00 0.00 2.57
3105 3513 3.009115 GCCCAGTGTCCCAGCCTA 61.009 66.667 0.00 0.00 0.00 3.93
3107 3515 4.729918 CTGCCCAGTGTCCCAGCC 62.730 72.222 0.00 0.00 0.00 4.85
3108 3516 1.626356 TATCTGCCCAGTGTCCCAGC 61.626 60.000 0.00 0.00 0.00 4.85
3109 3517 1.135094 ATATCTGCCCAGTGTCCCAG 58.865 55.000 0.00 0.00 0.00 4.45
3110 3518 0.839277 CATATCTGCCCAGTGTCCCA 59.161 55.000 0.00 0.00 0.00 4.37
3111 3519 0.109342 CCATATCTGCCCAGTGTCCC 59.891 60.000 0.00 0.00 0.00 4.46
3112 3520 0.536006 GCCATATCTGCCCAGTGTCC 60.536 60.000 0.00 0.00 0.00 4.02
3113 3521 0.471617 AGCCATATCTGCCCAGTGTC 59.528 55.000 0.00 0.00 0.00 3.67
3114 3522 0.182061 CAGCCATATCTGCCCAGTGT 59.818 55.000 0.00 0.00 0.00 3.55
3115 3523 0.182061 ACAGCCATATCTGCCCAGTG 59.818 55.000 0.00 0.00 37.59 3.66
3116 3524 0.182061 CACAGCCATATCTGCCCAGT 59.818 55.000 0.00 0.00 37.59 4.00
3117 3525 0.471191 TCACAGCCATATCTGCCCAG 59.529 55.000 0.00 0.00 37.59 4.45
3118 3526 1.142936 ATCACAGCCATATCTGCCCA 58.857 50.000 0.00 0.00 37.59 5.36
3119 3527 3.423539 TTATCACAGCCATATCTGCCC 57.576 47.619 0.00 0.00 37.59 5.36
3120 3528 3.693085 CCATTATCACAGCCATATCTGCC 59.307 47.826 0.00 0.00 37.59 4.85
3121 3529 3.693085 CCCATTATCACAGCCATATCTGC 59.307 47.826 0.00 0.00 37.59 4.26
3122 3530 3.693085 GCCCATTATCACAGCCATATCTG 59.307 47.826 0.00 0.00 39.86 2.90
3123 3531 3.331591 TGCCCATTATCACAGCCATATCT 59.668 43.478 0.00 0.00 0.00 1.98
3124 3532 3.689347 TGCCCATTATCACAGCCATATC 58.311 45.455 0.00 0.00 0.00 1.63
3125 3533 3.562826 CCTGCCCATTATCACAGCCATAT 60.563 47.826 0.00 0.00 0.00 1.78
3126 3534 2.224843 CCTGCCCATTATCACAGCCATA 60.225 50.000 0.00 0.00 0.00 2.74
3127 3535 1.479942 CCTGCCCATTATCACAGCCAT 60.480 52.381 0.00 0.00 0.00 4.40
3128 3536 0.106569 CCTGCCCATTATCACAGCCA 60.107 55.000 0.00 0.00 0.00 4.75
3129 3537 0.825010 CCCTGCCCATTATCACAGCC 60.825 60.000 0.00 0.00 0.00 4.85
3130 3538 0.183492 TCCCTGCCCATTATCACAGC 59.817 55.000 0.00 0.00 0.00 4.40
3131 3539 1.202855 CCTCCCTGCCCATTATCACAG 60.203 57.143 0.00 0.00 0.00 3.66
3132 3540 0.846015 CCTCCCTGCCCATTATCACA 59.154 55.000 0.00 0.00 0.00 3.58
3133 3541 0.111253 CCCTCCCTGCCCATTATCAC 59.889 60.000 0.00 0.00 0.00 3.06
3134 3542 0.029163 TCCCTCCCTGCCCATTATCA 60.029 55.000 0.00 0.00 0.00 2.15
3135 3543 0.695347 CTCCCTCCCTGCCCATTATC 59.305 60.000 0.00 0.00 0.00 1.75
3136 3544 0.271927 TCTCCCTCCCTGCCCATTAT 59.728 55.000 0.00 0.00 0.00 1.28
3137 3545 0.271927 ATCTCCCTCCCTGCCCATTA 59.728 55.000 0.00 0.00 0.00 1.90
3138 3546 1.006631 ATCTCCCTCCCTGCCCATT 59.993 57.895 0.00 0.00 0.00 3.16
3139 3547 1.773391 CATCTCCCTCCCTGCCCAT 60.773 63.158 0.00 0.00 0.00 4.00
3140 3548 2.367377 CATCTCCCTCCCTGCCCA 60.367 66.667 0.00 0.00 0.00 5.36
3141 3549 3.174265 CCATCTCCCTCCCTGCCC 61.174 72.222 0.00 0.00 0.00 5.36
3142 3550 3.174265 CCCATCTCCCTCCCTGCC 61.174 72.222 0.00 0.00 0.00 4.85
3143 3551 1.064824 ATTCCCATCTCCCTCCCTGC 61.065 60.000 0.00 0.00 0.00 4.85
3144 3552 0.769873 CATTCCCATCTCCCTCCCTG 59.230 60.000 0.00 0.00 0.00 4.45
3145 3553 0.402566 CCATTCCCATCTCCCTCCCT 60.403 60.000 0.00 0.00 0.00 4.20
3146 3554 0.699231 ACCATTCCCATCTCCCTCCC 60.699 60.000 0.00 0.00 0.00 4.30
3147 3555 0.475906 CACCATTCCCATCTCCCTCC 59.524 60.000 0.00 0.00 0.00 4.30
3148 3556 0.475906 CCACCATTCCCATCTCCCTC 59.524 60.000 0.00 0.00 0.00 4.30
3149 3557 1.649271 GCCACCATTCCCATCTCCCT 61.649 60.000 0.00 0.00 0.00 4.20
3150 3558 1.152673 GCCACCATTCCCATCTCCC 60.153 63.158 0.00 0.00 0.00 4.30
3151 3559 1.152673 GGCCACCATTCCCATCTCC 60.153 63.158 0.00 0.00 0.00 3.71
3152 3560 0.186873 ATGGCCACCATTCCCATCTC 59.813 55.000 8.16 0.00 42.23 2.75
3153 3561 2.335504 ATGGCCACCATTCCCATCT 58.664 52.632 8.16 0.00 42.23 2.90
3167 3575 1.601430 GATCTTCTTCTCGCCAATGGC 59.399 52.381 15.52 15.52 46.75 4.40
3168 3576 2.216898 GGATCTTCTTCTCGCCAATGG 58.783 52.381 0.00 0.00 0.00 3.16
3169 3577 2.871022 CTGGATCTTCTTCTCGCCAATG 59.129 50.000 0.00 0.00 0.00 2.82
3170 3578 2.503356 ACTGGATCTTCTTCTCGCCAAT 59.497 45.455 0.00 0.00 0.00 3.16
3171 3579 1.902508 ACTGGATCTTCTTCTCGCCAA 59.097 47.619 0.00 0.00 0.00 4.52
3172 3580 1.478510 GACTGGATCTTCTTCTCGCCA 59.521 52.381 0.00 0.00 0.00 5.69
3173 3581 1.754226 AGACTGGATCTTCTTCTCGCC 59.246 52.381 0.00 0.00 31.62 5.54
3174 3582 2.481104 CCAGACTGGATCTTCTTCTCGC 60.481 54.545 17.22 0.00 40.96 5.03
3175 3583 2.100584 CCCAGACTGGATCTTCTTCTCG 59.899 54.545 23.77 0.00 40.96 4.04
3176 3584 3.370104 TCCCAGACTGGATCTTCTTCTC 58.630 50.000 23.77 0.00 40.96 2.87
3177 3585 3.481559 TCCCAGACTGGATCTTCTTCT 57.518 47.619 23.77 0.00 40.96 2.85
3178 3586 3.708631 TCATCCCAGACTGGATCTTCTTC 59.291 47.826 23.77 0.00 43.39 2.87
3179 3587 3.729108 TCATCCCAGACTGGATCTTCTT 58.271 45.455 23.77 0.00 43.39 2.52
3180 3588 3.411454 TCATCCCAGACTGGATCTTCT 57.589 47.619 23.77 0.00 43.39 2.85
3181 3589 3.708631 TCTTCATCCCAGACTGGATCTTC 59.291 47.826 23.77 0.00 43.39 2.87
3182 3590 3.729108 TCTTCATCCCAGACTGGATCTT 58.271 45.455 23.77 1.43 43.39 2.40
3183 3591 3.411454 TCTTCATCCCAGACTGGATCT 57.589 47.619 23.77 3.85 43.39 2.75
3184 3592 3.244491 CCATCTTCATCCCAGACTGGATC 60.244 52.174 23.77 0.00 43.39 3.36
3185 3593 2.709934 CCATCTTCATCCCAGACTGGAT 59.290 50.000 23.77 11.36 46.22 3.41
3186 3594 2.121948 CCATCTTCATCCCAGACTGGA 58.878 52.381 23.77 9.46 40.96 3.86
3187 3595 1.142465 CCCATCTTCATCCCAGACTGG 59.858 57.143 15.15 15.15 37.25 4.00
3188 3596 2.121948 TCCCATCTTCATCCCAGACTG 58.878 52.381 0.00 0.00 0.00 3.51
3189 3597 2.575921 TCCCATCTTCATCCCAGACT 57.424 50.000 0.00 0.00 0.00 3.24
3190 3598 2.158696 CCTTCCCATCTTCATCCCAGAC 60.159 54.545 0.00 0.00 0.00 3.51
3191 3599 2.130193 CCTTCCCATCTTCATCCCAGA 58.870 52.381 0.00 0.00 0.00 3.86
3192 3600 1.849039 ACCTTCCCATCTTCATCCCAG 59.151 52.381 0.00 0.00 0.00 4.45
3193 3601 1.565759 CACCTTCCCATCTTCATCCCA 59.434 52.381 0.00 0.00 0.00 4.37
3194 3602 1.133668 CCACCTTCCCATCTTCATCCC 60.134 57.143 0.00 0.00 0.00 3.85
3195 3603 1.752084 GCCACCTTCCCATCTTCATCC 60.752 57.143 0.00 0.00 0.00 3.51
3196 3604 1.213926 AGCCACCTTCCCATCTTCATC 59.786 52.381 0.00 0.00 0.00 2.92
3197 3605 1.064166 CAGCCACCTTCCCATCTTCAT 60.064 52.381 0.00 0.00 0.00 2.57
3198 3606 0.329261 CAGCCACCTTCCCATCTTCA 59.671 55.000 0.00 0.00 0.00 3.02
3199 3607 1.034292 GCAGCCACCTTCCCATCTTC 61.034 60.000 0.00 0.00 0.00 2.87
3200 3608 1.000396 GCAGCCACCTTCCCATCTT 60.000 57.895 0.00 0.00 0.00 2.40
3201 3609 2.679716 GCAGCCACCTTCCCATCT 59.320 61.111 0.00 0.00 0.00 2.90
3202 3610 2.440980 GGCAGCCACCTTCCCATC 60.441 66.667 6.55 0.00 0.00 3.51
3203 3611 2.855770 TTGGCAGCCACCTTCCCAT 61.856 57.895 15.89 0.00 30.78 4.00
3204 3612 3.506743 TTGGCAGCCACCTTCCCA 61.507 61.111 15.89 0.00 30.78 4.37
3205 3613 2.991540 GTTGGCAGCCACCTTCCC 60.992 66.667 15.89 0.00 30.78 3.97
3206 3614 1.809567 CTTGTTGGCAGCCACCTTCC 61.810 60.000 15.89 0.18 30.78 3.46
3207 3615 1.662044 CTTGTTGGCAGCCACCTTC 59.338 57.895 15.89 5.90 30.78 3.46
3208 3616 1.833934 CCTTGTTGGCAGCCACCTT 60.834 57.895 15.89 0.00 30.78 3.50
3209 3617 2.203538 CCTTGTTGGCAGCCACCT 60.204 61.111 15.89 0.00 30.78 4.00
3210 3618 1.809567 CTTCCTTGTTGGCAGCCACC 61.810 60.000 15.89 8.17 30.78 4.61
3211 3619 0.823356 TCTTCCTTGTTGGCAGCCAC 60.823 55.000 15.89 10.39 30.78 5.01
3212 3620 0.106268 TTCTTCCTTGTTGGCAGCCA 60.106 50.000 11.22 11.22 35.26 4.75
3213 3621 0.600057 CTTCTTCCTTGTTGGCAGCC 59.400 55.000 3.66 3.66 35.26 4.85
3214 3622 0.038801 GCTTCTTCCTTGTTGGCAGC 60.039 55.000 0.00 0.00 35.26 5.25
3215 3623 1.538950 GAGCTTCTTCCTTGTTGGCAG 59.461 52.381 0.00 0.00 35.26 4.85
3216 3624 1.143684 AGAGCTTCTTCCTTGTTGGCA 59.856 47.619 0.00 0.00 35.26 4.92
3217 3625 1.538950 CAGAGCTTCTTCCTTGTTGGC 59.461 52.381 0.00 0.00 35.26 4.52
3218 3626 2.157738 CCAGAGCTTCTTCCTTGTTGG 58.842 52.381 0.00 0.00 37.10 3.77
3219 3627 2.157738 CCCAGAGCTTCTTCCTTGTTG 58.842 52.381 0.00 0.00 0.00 3.33
3220 3628 1.546548 GCCCAGAGCTTCTTCCTTGTT 60.547 52.381 0.00 0.00 38.99 2.83
3221 3629 0.037447 GCCCAGAGCTTCTTCCTTGT 59.963 55.000 0.00 0.00 38.99 3.16
3222 3630 0.037303 TGCCCAGAGCTTCTTCCTTG 59.963 55.000 0.00 0.00 44.23 3.61
3223 3631 0.327591 CTGCCCAGAGCTTCTTCCTT 59.672 55.000 0.00 0.00 44.23 3.36
3224 3632 1.560866 CCTGCCCAGAGCTTCTTCCT 61.561 60.000 0.00 0.00 44.23 3.36
3225 3633 1.077858 CCTGCCCAGAGCTTCTTCC 60.078 63.158 0.00 0.00 44.23 3.46
3226 3634 1.077858 CCCTGCCCAGAGCTTCTTC 60.078 63.158 0.00 0.00 44.23 2.87
3227 3635 1.539869 TCCCTGCCCAGAGCTTCTT 60.540 57.895 0.00 0.00 44.23 2.52
3228 3636 1.994507 CTCCCTGCCCAGAGCTTCT 60.995 63.158 0.00 0.00 44.23 2.85
3229 3637 1.557269 TTCTCCCTGCCCAGAGCTTC 61.557 60.000 0.00 0.00 44.23 3.86
3230 3638 1.136329 TTTCTCCCTGCCCAGAGCTT 61.136 55.000 0.00 0.00 44.23 3.74
3231 3639 1.539869 TTTCTCCCTGCCCAGAGCT 60.540 57.895 0.00 0.00 44.23 4.09
3232 3640 1.077858 CTTTCTCCCTGCCCAGAGC 60.078 63.158 0.00 0.00 44.14 4.09
3233 3641 1.134159 CATCTTTCTCCCTGCCCAGAG 60.134 57.143 0.00 0.00 0.00 3.35
3234 3642 0.914644 CATCTTTCTCCCTGCCCAGA 59.085 55.000 0.00 0.00 0.00 3.86
3235 3643 0.106819 CCATCTTTCTCCCTGCCCAG 60.107 60.000 0.00 0.00 0.00 4.45
3236 3644 0.549902 TCCATCTTTCTCCCTGCCCA 60.550 55.000 0.00 0.00 0.00 5.36
3237 3645 0.182299 CTCCATCTTTCTCCCTGCCC 59.818 60.000 0.00 0.00 0.00 5.36
3238 3646 1.134250 GTCTCCATCTTTCTCCCTGCC 60.134 57.143 0.00 0.00 0.00 4.85
3239 3647 1.836802 AGTCTCCATCTTTCTCCCTGC 59.163 52.381 0.00 0.00 0.00 4.85
3240 3648 2.419851 GCAGTCTCCATCTTTCTCCCTG 60.420 54.545 0.00 0.00 0.00 4.45
3241 3649 1.836802 GCAGTCTCCATCTTTCTCCCT 59.163 52.381 0.00 0.00 0.00 4.20
3242 3650 1.472376 CGCAGTCTCCATCTTTCTCCC 60.472 57.143 0.00 0.00 0.00 4.30
3243 3651 1.472376 CCGCAGTCTCCATCTTTCTCC 60.472 57.143 0.00 0.00 0.00 3.71
3244 3652 1.933247 CCGCAGTCTCCATCTTTCTC 58.067 55.000 0.00 0.00 0.00 2.87
3245 3653 0.107945 GCCGCAGTCTCCATCTTTCT 60.108 55.000 0.00 0.00 0.00 2.52
3246 3654 1.092345 GGCCGCAGTCTCCATCTTTC 61.092 60.000 0.00 0.00 0.00 2.62
3247 3655 1.078143 GGCCGCAGTCTCCATCTTT 60.078 57.895 0.00 0.00 0.00 2.52
3248 3656 2.586792 GGCCGCAGTCTCCATCTT 59.413 61.111 0.00 0.00 0.00 2.40
3249 3657 3.842923 CGGCCGCAGTCTCCATCT 61.843 66.667 14.67 0.00 0.00 2.90
3373 3781 0.540923 CTCCCTTTGCTCTAGCTGCT 59.459 55.000 7.57 7.57 42.66 4.24
3713 4139 0.675633 CAAACCACCAAGAGGCCAAG 59.324 55.000 5.01 0.00 39.06 3.61
3763 4198 2.153645 TCAACACACATGCTGATGGAC 58.846 47.619 0.00 0.00 33.39 4.02
4207 4644 5.801350 TCAAGCAACTATCTAATGCACAC 57.199 39.130 0.00 0.00 42.45 3.82
4217 4654 8.405531 TGGCAAAACTTATATCAAGCAACTATC 58.594 33.333 0.00 0.00 0.00 2.08
4262 4700 4.412199 CCTTTGGAGTATGGATCCCTACAA 59.588 45.833 24.08 17.11 35.86 2.41
4445 4891 5.933617 AGAGCATATTTCATGGCTAGTGAA 58.066 37.500 0.00 0.00 36.59 3.18
5250 5722 2.941720 GAGATGTTCCATTGACTGCCTC 59.058 50.000 0.00 0.00 0.00 4.70
5259 5731 6.494835 AGTTTTGCCTAAAGAGATGTTCCATT 59.505 34.615 0.00 0.00 0.00 3.16
5273 5745 6.239289 CCTTCAATCAGGAAAGTTTTGCCTAA 60.239 38.462 0.00 0.00 35.71 2.69
5326 5800 1.155390 AGTCCACCAGAACCCGAGA 59.845 57.895 0.00 0.00 0.00 4.04
5329 5803 1.004918 GACAGTCCACCAGAACCCG 60.005 63.158 0.00 0.00 0.00 5.28
5337 5811 6.415573 AGAAAAATACATAGGACAGTCCACC 58.584 40.000 22.31 0.00 39.61 4.61
5358 5832 6.896969 CAAACTTTGCCTGTTTCAAAAAGAA 58.103 32.000 0.00 0.00 35.71 2.52
5378 5852 2.357952 ACCGGAAAGAGTTGAAGCAAAC 59.642 45.455 9.46 0.00 0.00 2.93
5384 5858 2.290071 GGGATGACCGGAAAGAGTTGAA 60.290 50.000 9.46 0.00 36.97 2.69
5404 5878 2.043652 CTGTTCATGGGCTGGGGG 60.044 66.667 0.00 0.00 0.00 5.40
5405 5879 0.967380 GTTCTGTTCATGGGCTGGGG 60.967 60.000 0.00 0.00 0.00 4.96
5406 5880 0.251297 TGTTCTGTTCATGGGCTGGG 60.251 55.000 0.00 0.00 0.00 4.45
5407 5881 1.270550 GTTGTTCTGTTCATGGGCTGG 59.729 52.381 0.00 0.00 0.00 4.85
5408 5882 2.233271 AGTTGTTCTGTTCATGGGCTG 58.767 47.619 0.00 0.00 0.00 4.85
5410 5884 3.674997 TCTAGTTGTTCTGTTCATGGGC 58.325 45.455 0.00 0.00 0.00 5.36
5412 5886 8.553459 AGTTTATCTAGTTGTTCTGTTCATGG 57.447 34.615 0.00 0.00 0.00 3.66
5417 5891 9.503399 CCCTTTAGTTTATCTAGTTGTTCTGTT 57.497 33.333 0.00 0.00 0.00 3.16
5418 5892 7.606839 GCCCTTTAGTTTATCTAGTTGTTCTGT 59.393 37.037 0.00 0.00 0.00 3.41
5419 5893 7.606456 TGCCCTTTAGTTTATCTAGTTGTTCTG 59.394 37.037 0.00 0.00 0.00 3.02
5421 5895 7.916914 TGCCCTTTAGTTTATCTAGTTGTTC 57.083 36.000 0.00 0.00 0.00 3.18
5422 5896 7.148069 GCATGCCCTTTAGTTTATCTAGTTGTT 60.148 37.037 6.36 0.00 0.00 2.83
5423 5897 6.318900 GCATGCCCTTTAGTTTATCTAGTTGT 59.681 38.462 6.36 0.00 0.00 3.32
5424 5898 6.318648 TGCATGCCCTTTAGTTTATCTAGTTG 59.681 38.462 16.68 0.00 0.00 3.16
5425 5899 6.423182 TGCATGCCCTTTAGTTTATCTAGTT 58.577 36.000 16.68 0.00 0.00 2.24
5426 5900 6.001449 TGCATGCCCTTTAGTTTATCTAGT 57.999 37.500 16.68 0.00 0.00 2.57
5427 5901 6.318648 TGTTGCATGCCCTTTAGTTTATCTAG 59.681 38.462 16.68 0.00 0.00 2.43
5428 5902 6.184068 TGTTGCATGCCCTTTAGTTTATCTA 58.816 36.000 16.68 0.00 0.00 1.98
5430 5904 5.125417 TCTGTTGCATGCCCTTTAGTTTATC 59.875 40.000 16.68 0.00 0.00 1.75
5431 5905 5.016173 TCTGTTGCATGCCCTTTAGTTTAT 58.984 37.500 16.68 0.00 0.00 1.40
5432 5906 4.402829 TCTGTTGCATGCCCTTTAGTTTA 58.597 39.130 16.68 0.00 0.00 2.01
5434 5908 2.875296 TCTGTTGCATGCCCTTTAGTT 58.125 42.857 16.68 0.00 0.00 2.24
5435 5909 2.584835 TCTGTTGCATGCCCTTTAGT 57.415 45.000 16.68 0.00 0.00 2.24
5436 5910 4.178540 CAATTCTGTTGCATGCCCTTTAG 58.821 43.478 16.68 6.71 0.00 1.85
5437 5911 3.577848 ACAATTCTGTTGCATGCCCTTTA 59.422 39.130 16.68 0.00 28.57 1.85
5439 5913 1.972795 ACAATTCTGTTGCATGCCCTT 59.027 42.857 16.68 0.00 28.57 3.95
5441 5915 2.460757 AACAATTCTGTTGCATGCCC 57.539 45.000 16.68 6.36 44.28 5.36
5442 5916 7.455447 GTTAATTAACAATTCTGTTGCATGCC 58.545 34.615 20.95 0.28 45.53 4.40
5443 5917 7.166168 CGTTAATTAACAATTCTGTTGCATGC 58.834 34.615 24.27 11.82 45.53 4.06
5444 5918 7.540400 TCCGTTAATTAACAATTCTGTTGCATG 59.460 33.333 24.27 6.24 45.53 4.06
5445 5919 7.598278 TCCGTTAATTAACAATTCTGTTGCAT 58.402 30.769 24.27 0.00 45.53 3.96
5446 5920 6.971602 TCCGTTAATTAACAATTCTGTTGCA 58.028 32.000 24.27 0.00 45.53 4.08
5447 5921 7.861176 TTCCGTTAATTAACAATTCTGTTGC 57.139 32.000 24.27 0.00 45.53 4.17
5452 5926 8.921670 GCATGTTTTCCGTTAATTAACAATTCT 58.078 29.630 24.27 2.55 35.99 2.40
5454 5928 7.657761 TGGCATGTTTTCCGTTAATTAACAATT 59.342 29.630 24.27 4.65 35.99 2.32
5455 5929 7.155328 TGGCATGTTTTCCGTTAATTAACAAT 58.845 30.769 24.27 6.59 35.99 2.71
5456 5930 6.513180 TGGCATGTTTTCCGTTAATTAACAA 58.487 32.000 24.27 11.85 35.99 2.83
5457 5931 6.085555 TGGCATGTTTTCCGTTAATTAACA 57.914 33.333 24.27 9.24 35.99 2.41
5458 5932 6.809196 TGATGGCATGTTTTCCGTTAATTAAC 59.191 34.615 16.87 16.87 0.00 2.01
5459 5933 6.809196 GTGATGGCATGTTTTCCGTTAATTAA 59.191 34.615 3.81 0.00 0.00 1.40
5460 5934 6.071896 TGTGATGGCATGTTTTCCGTTAATTA 60.072 34.615 3.81 0.00 0.00 1.40
5461 5935 5.167845 GTGATGGCATGTTTTCCGTTAATT 58.832 37.500 3.81 0.00 0.00 1.40
5462 5936 4.219507 TGTGATGGCATGTTTTCCGTTAAT 59.780 37.500 3.81 0.00 0.00 1.40
5463 5937 3.570125 TGTGATGGCATGTTTTCCGTTAA 59.430 39.130 3.81 0.00 0.00 2.01
5464 5938 3.149981 TGTGATGGCATGTTTTCCGTTA 58.850 40.909 3.81 0.00 0.00 3.18
5465 5939 1.959985 TGTGATGGCATGTTTTCCGTT 59.040 42.857 3.81 0.00 0.00 4.44
5468 5942 3.872511 TCATGTGATGGCATGTTTTCC 57.127 42.857 3.81 0.00 44.68 3.13
5469 5943 4.558178 TGTTCATGTGATGGCATGTTTTC 58.442 39.130 3.81 0.00 44.68 2.29
5471 5945 3.827876 TCTGTTCATGTGATGGCATGTTT 59.172 39.130 3.81 0.00 44.68 2.83
5473 5947 3.076079 TCTGTTCATGTGATGGCATGT 57.924 42.857 3.81 0.00 44.68 3.21
5474 5948 3.191791 TGTTCTGTTCATGTGATGGCATG 59.808 43.478 3.81 0.00 45.48 4.06
5476 5950 2.553602 GTGTTCTGTTCATGTGATGGCA 59.446 45.455 0.00 0.00 0.00 4.92
5478 5952 5.645067 AGTATGTGTTCTGTTCATGTGATGG 59.355 40.000 0.00 0.00 0.00 3.51
5479 5953 6.183360 GGAGTATGTGTTCTGTTCATGTGATG 60.183 42.308 0.00 0.00 0.00 3.07
5481 5955 5.237815 GGAGTATGTGTTCTGTTCATGTGA 58.762 41.667 0.00 0.00 0.00 3.58
5482 5956 4.393062 GGGAGTATGTGTTCTGTTCATGTG 59.607 45.833 0.00 0.00 0.00 3.21
5483 5957 4.287067 AGGGAGTATGTGTTCTGTTCATGT 59.713 41.667 0.00 0.00 0.00 3.21
5484 5958 4.836825 AGGGAGTATGTGTTCTGTTCATG 58.163 43.478 0.00 0.00 0.00 3.07
5485 5959 4.780021 AGAGGGAGTATGTGTTCTGTTCAT 59.220 41.667 0.00 0.00 0.00 2.57
5486 5960 4.021104 CAGAGGGAGTATGTGTTCTGTTCA 60.021 45.833 0.00 0.00 0.00 3.18
5487 5961 4.021016 ACAGAGGGAGTATGTGTTCTGTTC 60.021 45.833 0.00 0.00 41.63 3.18
5488 5962 3.904339 ACAGAGGGAGTATGTGTTCTGTT 59.096 43.478 0.00 0.00 41.63 3.16
5489 5963 3.511477 ACAGAGGGAGTATGTGTTCTGT 58.489 45.455 0.00 0.00 40.11 3.41
5491 5965 4.024670 GGTACAGAGGGAGTATGTGTTCT 58.975 47.826 0.00 0.00 31.40 3.01
5492 5966 3.181489 CGGTACAGAGGGAGTATGTGTTC 60.181 52.174 0.00 0.00 31.40 3.18
5493 5967 2.758979 CGGTACAGAGGGAGTATGTGTT 59.241 50.000 0.00 0.00 31.40 3.32
5495 5969 2.651455 TCGGTACAGAGGGAGTATGTG 58.349 52.381 0.00 0.00 31.40 3.21
5496 5970 3.377253 TTCGGTACAGAGGGAGTATGT 57.623 47.619 0.00 0.00 34.14 2.29
5497 5971 4.939052 ATTTCGGTACAGAGGGAGTATG 57.061 45.455 0.00 0.00 0.00 2.39
5499 5973 4.858850 TGTATTTCGGTACAGAGGGAGTA 58.141 43.478 0.00 0.00 31.33 2.59
5501 5975 4.099573 ACATGTATTTCGGTACAGAGGGAG 59.900 45.833 0.00 0.00 37.93 4.30
5502 5976 4.028131 ACATGTATTTCGGTACAGAGGGA 58.972 43.478 0.00 0.00 37.93 4.20
5503 5977 4.369182 GACATGTATTTCGGTACAGAGGG 58.631 47.826 0.00 0.00 37.93 4.30
5504 5978 4.042398 CGACATGTATTTCGGTACAGAGG 58.958 47.826 0.00 0.00 37.93 3.69
5505 5979 3.486108 GCGACATGTATTTCGGTACAGAG 59.514 47.826 0.00 0.00 37.93 3.35
5506 5980 3.129813 AGCGACATGTATTTCGGTACAGA 59.870 43.478 7.49 0.00 43.71 3.41
5508 5982 3.183754 CAGCGACATGTATTTCGGTACA 58.816 45.455 8.74 0.00 43.70 2.90
5509 5983 2.538449 CCAGCGACATGTATTTCGGTAC 59.462 50.000 8.74 0.00 43.70 3.34
5512 5986 1.860950 CTCCAGCGACATGTATTTCGG 59.139 52.381 0.00 0.00 35.73 4.30
5513 5987 2.540515 ACTCCAGCGACATGTATTTCG 58.459 47.619 0.00 0.00 38.31 3.46
5514 5988 3.491267 GCTACTCCAGCGACATGTATTTC 59.509 47.826 0.00 0.00 41.37 2.17
5515 5989 3.458189 GCTACTCCAGCGACATGTATTT 58.542 45.455 0.00 0.00 41.37 1.40
5516 5990 3.099267 GCTACTCCAGCGACATGTATT 57.901 47.619 0.00 0.00 41.37 1.89
5517 5991 2.802787 GCTACTCCAGCGACATGTAT 57.197 50.000 0.00 0.00 41.37 2.29
5534 6008 4.464069 CTGGAGTAGCTAAACTTCAGCT 57.536 45.455 11.26 2.06 44.19 4.24
5547 6021 3.731216 CGAAATACATGTCGCTGGAGTAG 59.269 47.826 0.00 0.00 0.00 2.57
5549 6023 2.540515 CGAAATACATGTCGCTGGAGT 58.459 47.619 0.00 0.00 0.00 3.85
5550 6024 1.860950 CCGAAATACATGTCGCTGGAG 59.139 52.381 0.00 0.00 35.93 3.86
5552 6026 1.651987 ACCGAAATACATGTCGCTGG 58.348 50.000 0.00 1.83 35.93 4.85
5553 6027 3.183754 TGTACCGAAATACATGTCGCTG 58.816 45.455 0.00 0.00 35.93 5.18
5554 6028 3.129813 TCTGTACCGAAATACATGTCGCT 59.870 43.478 0.00 0.00 34.59 4.93
5557 6031 4.098960 TCCCTCTGTACCGAAATACATGTC 59.901 45.833 0.00 0.00 34.59 3.06
5558 6032 4.028131 TCCCTCTGTACCGAAATACATGT 58.972 43.478 2.69 2.69 34.59 3.21
5559 6033 4.099573 ACTCCCTCTGTACCGAAATACATG 59.900 45.833 0.00 0.00 34.59 3.21
5560 6034 4.287552 ACTCCCTCTGTACCGAAATACAT 58.712 43.478 0.00 0.00 34.59 2.29
5562 6036 4.641989 TGTACTCCCTCTGTACCGAAATAC 59.358 45.833 0.00 0.00 39.42 1.89
5563 6037 4.858850 TGTACTCCCTCTGTACCGAAATA 58.141 43.478 0.00 0.00 39.42 1.40
5565 6039 3.159213 TGTACTCCCTCTGTACCGAAA 57.841 47.619 0.00 0.00 39.42 3.46
5567 6041 2.651455 CATGTACTCCCTCTGTACCGA 58.349 52.381 0.00 0.00 39.42 4.69
5568 6042 1.067212 GCATGTACTCCCTCTGTACCG 59.933 57.143 0.00 0.00 39.42 4.02
5571 6045 6.449830 TCTATAGCATGTACTCCCTCTGTA 57.550 41.667 0.00 0.00 0.00 2.74
5572 6046 5.326283 TCTATAGCATGTACTCCCTCTGT 57.674 43.478 0.00 0.00 0.00 3.41
5575 6049 4.439426 CGCATCTATAGCATGTACTCCCTC 60.439 50.000 11.42 0.00 0.00 4.30
5576 6050 3.445450 CGCATCTATAGCATGTACTCCCT 59.555 47.826 11.42 0.00 0.00 4.20
5577 6051 3.444034 TCGCATCTATAGCATGTACTCCC 59.556 47.826 11.42 0.00 0.00 4.30
5578 6052 4.156922 ACTCGCATCTATAGCATGTACTCC 59.843 45.833 11.42 0.00 0.00 3.85
5579 6053 5.303747 ACTCGCATCTATAGCATGTACTC 57.696 43.478 11.42 0.00 0.00 2.59
5580 6054 6.819397 TTACTCGCATCTATAGCATGTACT 57.181 37.500 11.42 0.00 0.00 2.73
5582 6056 7.826690 TGATTTACTCGCATCTATAGCATGTA 58.173 34.615 11.42 0.00 0.00 2.29
5583 6057 6.691508 TGATTTACTCGCATCTATAGCATGT 58.308 36.000 11.42 0.00 0.00 3.21
5584 6058 7.586714 TTGATTTACTCGCATCTATAGCATG 57.413 36.000 0.00 1.79 0.00 4.06
5585 6059 7.118390 GGTTTGATTTACTCGCATCTATAGCAT 59.882 37.037 0.00 0.00 0.00 3.79
5586 6060 6.423905 GGTTTGATTTACTCGCATCTATAGCA 59.576 38.462 0.00 0.00 0.00 3.49
5587 6061 6.423905 TGGTTTGATTTACTCGCATCTATAGC 59.576 38.462 0.00 0.00 0.00 2.97
5588 6062 7.946655 TGGTTTGATTTACTCGCATCTATAG 57.053 36.000 0.00 0.00 0.00 1.31
5589 6063 8.367911 AGATGGTTTGATTTACTCGCATCTATA 58.632 33.333 0.00 0.00 0.00 1.31
5590 6064 7.220030 AGATGGTTTGATTTACTCGCATCTAT 58.780 34.615 0.00 0.00 0.00 1.98
5591 6065 6.582636 AGATGGTTTGATTTACTCGCATCTA 58.417 36.000 0.00 0.00 0.00 1.98
5593 6067 5.741388 AGATGGTTTGATTTACTCGCATC 57.259 39.130 0.00 0.00 0.00 3.91
5595 6069 6.170506 ACTTAGATGGTTTGATTTACTCGCA 58.829 36.000 0.00 0.00 0.00 5.10
5596 6070 6.663944 ACTTAGATGGTTTGATTTACTCGC 57.336 37.500 0.00 0.00 0.00 5.03
5597 6071 8.697846 TGTACTTAGATGGTTTGATTTACTCG 57.302 34.615 0.00 0.00 0.00 4.18
5625 7179 7.121168 ACTTTGTTCATTCTGTGAAGACTTTCA 59.879 33.333 0.00 0.00 46.99 2.69
5665 7219 6.560253 TTCTGTTTCCACTGCTTAGATTTC 57.440 37.500 0.00 0.00 0.00 2.17
5678 7232 6.591935 ACTGAGTACTTTCATTCTGTTTCCA 58.408 36.000 0.00 0.00 0.00 3.53
5681 7235 8.643324 AGACTACTGAGTACTTTCATTCTGTTT 58.357 33.333 0.00 0.00 35.45 2.83
5691 7245 4.321082 GGTGCGAAGACTACTGAGTACTTT 60.321 45.833 0.00 0.00 35.45 2.66
5709 7263 2.416747 TCTTTCTCTGTGATTGGTGCG 58.583 47.619 0.00 0.00 0.00 5.34
5721 7275 7.972301 TCTGAAGAATTTCTCCTTCTTTCTCT 58.028 34.615 0.00 0.00 41.73 3.10
5800 7359 6.535508 GGTAAACAAATCTCTATGTCTTCGCT 59.464 38.462 0.00 0.00 0.00 4.93
5828 7387 0.249741 CCGTGTCGGGAGTTTGAACT 60.250 55.000 0.00 0.00 44.15 3.01
5946 7505 2.492019 TCACCGCAAGATCTATCACG 57.508 50.000 0.00 0.00 43.02 4.35
5974 7533 3.976942 GTCAAAGAACAAGTACGTAGCGA 59.023 43.478 0.00 0.00 0.00 4.93
5977 7536 6.183359 GGATTCGTCAAAGAACAAGTACGTAG 60.183 42.308 0.00 0.00 32.39 3.51
6020 7579 1.202557 TCTAGACGGTTGGCGTTGTTT 60.203 47.619 0.00 0.00 0.00 2.83
6024 7583 0.896940 TCCTCTAGACGGTTGGCGTT 60.897 55.000 7.76 0.00 0.00 4.84
6030 7589 1.320344 TGCGCATCCTCTAGACGGTT 61.320 55.000 5.66 0.00 0.00 4.44
6032 7591 0.032678 ATTGCGCATCCTCTAGACGG 59.967 55.000 12.75 2.55 0.00 4.79
6047 7607 1.929836 CGTGCTACTCTTGAGGATTGC 59.070 52.381 2.55 0.00 0.00 3.56
6079 7639 5.566774 GCATCAACGAAGAACTCAATCAAAG 59.433 40.000 0.00 0.00 0.00 2.77
6130 7690 2.500229 CTAAGTGAGGAAAACCCGCAA 58.500 47.619 0.00 0.00 46.41 4.85
6159 7719 0.400594 ACCCTTCCTGGCACTAACAC 59.599 55.000 0.00 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.