Multiple sequence alignment - TraesCS6B01G164900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G164900 chr6B 100.000 2462 0 0 1 2462 171973028 171970567 0.000000e+00 4547.0
1 TraesCS6B01G164900 chr6B 95.188 478 23 0 1001 1478 171728232 171727755 0.000000e+00 756.0
2 TraesCS6B01G164900 chr6B 92.842 475 34 0 1001 1475 149055413 149055887 0.000000e+00 689.0
3 TraesCS6B01G164900 chr6B 92.964 469 33 0 987 1455 171728474 171728006 0.000000e+00 684.0
4 TraesCS6B01G164900 chr6B 90.855 503 40 6 957 1456 149055141 149055640 0.000000e+00 669.0
5 TraesCS6B01G164900 chr6B 90.395 177 9 2 1 177 171729775 171729607 2.460000e-55 226.0
6 TraesCS6B01G164900 chr6B 90.647 139 10 2 42 177 171806986 171806848 5.410000e-42 182.0
7 TraesCS6B01G164900 chr6B 81.283 187 22 9 1 176 139895610 139895426 3.300000e-29 139.0
8 TraesCS6B01G164900 chr6B 98.246 57 1 0 564 620 171972411 171972355 1.560000e-17 100.0
9 TraesCS6B01G164900 chr6B 98.246 57 1 0 618 674 171972465 171972409 1.560000e-17 100.0
10 TraesCS6B01G164900 chr6B 100.000 33 0 0 740 772 149054960 149054992 7.350000e-06 62.1
11 TraesCS6B01G164900 chr6B 100.000 29 0 0 1863 1891 688199970 688199942 1.000000e-03 54.7
12 TraesCS6B01G164900 chr6A 88.780 713 49 21 957 1666 107701285 107700601 0.000000e+00 845.0
13 TraesCS6B01G164900 chr6A 92.233 515 36 4 957 1469 107692765 107692253 0.000000e+00 726.0
14 TraesCS6B01G164900 chr6A 87.172 343 27 7 1 326 107800352 107800010 8.310000e-100 374.0
15 TraesCS6B01G164900 chr6A 82.895 304 31 13 322 620 107799634 107799347 1.130000e-63 254.0
16 TraesCS6B01G164900 chr6A 89.385 179 13 4 442 620 107799979 107799807 1.150000e-53 220.0
17 TraesCS6B01G164900 chr6A 90.441 136 12 1 42 177 107694062 107693928 7.000000e-41 178.0
18 TraesCS6B01G164900 chr6A 87.619 105 10 1 696 797 211284399 211284503 4.300000e-23 119.0
19 TraesCS6B01G164900 chr6A 92.000 75 4 1 1666 1740 107697152 107697080 1.200000e-18 104.0
20 TraesCS6B01G164900 chr6A 92.063 63 5 0 1890 1952 107797084 107797022 3.370000e-14 89.8
21 TraesCS6B01G164900 chr6A 83.951 81 6 5 1762 1835 107697026 107696946 1.220000e-08 71.3
22 TraesCS6B01G164900 chr6A 100.000 30 0 0 743 772 91423391 91423420 3.420000e-04 56.5
23 TraesCS6B01G164900 chr6D 88.198 627 45 18 1114 1740 89365738 89365141 0.000000e+00 721.0
24 TraesCS6B01G164900 chr6D 87.993 583 41 16 1161 1743 89355623 89355070 0.000000e+00 662.0
25 TraesCS6B01G164900 chr6D 86.299 635 55 12 1 620 89512846 89512229 0.000000e+00 662.0
26 TraesCS6B01G164900 chr6D 87.211 563 45 12 737 1272 89512107 89511545 1.250000e-172 616.0
27 TraesCS6B01G164900 chr6D 87.992 533 31 12 1210 1740 89510619 89510118 1.260000e-167 599.0
28 TraesCS6B01G164900 chr6D 83.523 176 22 4 1 171 75371315 75371488 9.110000e-35 158.0
29 TraesCS6B01G164900 chr6D 90.385 52 2 1 2011 2059 89509864 89509813 5.680000e-07 65.8
30 TraesCS6B01G164900 chr6D 94.595 37 2 0 740 776 89357040 89357004 9.510000e-05 58.4
31 TraesCS6B01G164900 chr2D 92.629 502 30 6 957 1455 520583568 520583071 0.000000e+00 715.0
32 TraesCS6B01G164900 chr2D 92.050 478 36 1 1001 1478 520583295 520582820 0.000000e+00 671.0
33 TraesCS6B01G164900 chr2D 84.000 425 41 11 2 402 520584530 520584109 1.380000e-102 383.0
34 TraesCS6B01G164900 chr2D 100.000 29 0 0 1863 1891 317267815 317267787 1.000000e-03 54.7
35 TraesCS6B01G164900 chr7D 90.698 473 43 1 1000 1472 562148731 562148260 1.610000e-176 628.0
36 TraesCS6B01G164900 chr7D 91.753 97 5 1 696 789 103191663 103191567 5.520000e-27 132.0
37 TraesCS6B01G164900 chr7D 88.571 105 9 1 696 797 601937266 601937162 9.240000e-25 124.0
38 TraesCS6B01G164900 chr7D 87.736 106 8 3 696 797 303996960 303996856 4.300000e-23 119.0
39 TraesCS6B01G164900 chr7D 88.636 44 3 2 1847 1890 301110646 301110687 4.000000e-03 52.8
40 TraesCS6B01G164900 chr2A 82.826 460 46 15 2 432 665845264 665844809 4.970000e-102 381.0
41 TraesCS6B01G164900 chr2B 84.932 365 35 12 2 346 613038619 613038255 3.900000e-93 351.0
42 TraesCS6B01G164900 chr3B 88.679 106 7 3 696 797 670745467 670745571 9.240000e-25 124.0
43 TraesCS6B01G164900 chr5A 100.000 30 0 0 1863 1892 521392473 521392444 3.420000e-04 56.5
44 TraesCS6B01G164900 chr7B 100.000 29 0 0 1863 1891 547704441 547704413 1.000000e-03 54.7
45 TraesCS6B01G164900 chr7A 100.000 29 0 0 1863 1891 592692140 592692168 1.000000e-03 54.7
46 TraesCS6B01G164900 chr3A 100.000 29 0 0 1863 1891 694975730 694975758 1.000000e-03 54.7
47 TraesCS6B01G164900 chr1B 96.875 32 1 0 1864 1895 541396982 541396951 1.000000e-03 54.7
48 TraesCS6B01G164900 chr1B 94.286 35 1 1 1863 1897 203424287 203424320 4.000000e-03 52.8
49 TraesCS6B01G164900 chr4B 100.000 28 0 0 2232 2259 647698192 647698165 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G164900 chr6B 171970567 171973028 2461 True 1582.333333 4547 98.830667 1 2462 3 chr6B.!!$R5 2461
1 TraesCS6B01G164900 chr6B 171727755 171729775 2020 True 555.333333 756 92.849000 1 1478 3 chr6B.!!$R4 1477
2 TraesCS6B01G164900 chr6B 149054960 149055887 927 False 473.366667 689 94.565667 740 1475 3 chr6B.!!$F1 735
3 TraesCS6B01G164900 chr6A 107692253 107701285 9032 True 384.860000 845 89.481000 42 1835 5 chr6A.!!$R1 1793
4 TraesCS6B01G164900 chr6A 107797022 107800352 3330 True 234.450000 374 87.878750 1 1952 4 chr6A.!!$R2 1951
5 TraesCS6B01G164900 chr6D 89365141 89365738 597 True 721.000000 721 88.198000 1114 1740 1 chr6D.!!$R1 626
6 TraesCS6B01G164900 chr6D 89509813 89512846 3033 True 485.700000 662 87.971750 1 2059 4 chr6D.!!$R3 2058
7 TraesCS6B01G164900 chr6D 89355070 89357040 1970 True 360.200000 662 91.294000 740 1743 2 chr6D.!!$R2 1003
8 TraesCS6B01G164900 chr2D 520582820 520584530 1710 True 589.666667 715 89.559667 2 1478 3 chr2D.!!$R2 1476

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
606 1049 0.106967 GCTAGGCTTCCCTTCCTTGG 60.107 60.0 0.0 0.0 42.87 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2296 12992 0.035534 TGCACCGTAAGCATCCATGT 60.036 50.0 0.0 0.0 37.02 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
106 115 4.180946 CGACTCCAGGCTCGTCGG 62.181 72.222 17.73 2.88 44.75 4.79
153 162 2.360475 GCGCTTGCTTCCCCTCTT 60.360 61.111 0.00 0.00 35.07 2.85
171 180 3.672808 TCTTCCCGTATCGTCTAGATCC 58.327 50.000 0.00 0.00 40.66 3.36
185 194 5.462405 GTCTAGATCCGCGTTGATTAGATT 58.538 41.667 4.92 0.00 0.00 2.40
264 291 3.988385 CGATCCGTTCGCGCATGG 61.988 66.667 11.04 11.04 41.69 3.66
269 296 2.202690 CGTTCGCGCATGGTAGGA 60.203 61.111 8.75 0.00 0.00 2.94
315 346 4.079253 AGGGATTTTTGCGTGTAGATTGT 58.921 39.130 0.00 0.00 0.00 2.71
346 377 1.787155 CTGTTCGTGTTCGAGGTCAAG 59.213 52.381 0.00 0.00 46.81 3.02
388 419 8.173775 GTCTCATATGCATGATTTATGTACTGC 58.826 37.037 10.16 0.00 40.40 4.40
392 423 6.947644 ATGCATGATTTATGTACTGCTTCA 57.052 33.333 0.00 0.00 39.08 3.02
402 433 0.747255 TACTGCTTCATCCGCTCCTC 59.253 55.000 0.00 0.00 0.00 3.71
403 434 1.260538 ACTGCTTCATCCGCTCCTCA 61.261 55.000 0.00 0.00 0.00 3.86
453 486 9.683069 ATTATGCTTGAATTTTATGGTCGAATC 57.317 29.630 0.00 0.00 0.00 2.52
454 487 5.890334 TGCTTGAATTTTATGGTCGAATCC 58.110 37.500 0.00 0.00 0.00 3.01
455 488 5.417266 TGCTTGAATTTTATGGTCGAATCCA 59.583 36.000 0.00 0.00 42.01 3.41
457 490 6.980397 GCTTGAATTTTATGGTCGAATCCATT 59.020 34.615 12.36 0.00 44.75 3.16
458 491 8.134895 GCTTGAATTTTATGGTCGAATCCATTA 58.865 33.333 12.36 1.59 44.75 1.90
464 497 7.681939 TTTATGGTCGAATCCATTATTAGCC 57.318 36.000 12.36 0.00 44.75 3.93
465 498 4.974645 TGGTCGAATCCATTATTAGCCT 57.025 40.909 0.00 0.00 31.96 4.58
477 510 6.537301 TCCATTATTAGCCTTTTGTGTCGTAG 59.463 38.462 0.00 0.00 0.00 3.51
482 515 3.805207 AGCCTTTTGTGTCGTAGTTCTT 58.195 40.909 0.00 0.00 0.00 2.52
487 520 5.753921 CCTTTTGTGTCGTAGTTCTTTCTCT 59.246 40.000 0.00 0.00 0.00 3.10
488 521 6.074249 CCTTTTGTGTCGTAGTTCTTTCTCTC 60.074 42.308 0.00 0.00 0.00 3.20
489 522 4.500603 TGTGTCGTAGTTCTTTCTCTCC 57.499 45.455 0.00 0.00 0.00 3.71
604 1047 1.675007 AAGCTAGGCTTCCCTTCCTT 58.325 50.000 0.00 0.00 46.77 3.36
606 1049 0.106967 GCTAGGCTTCCCTTCCTTGG 60.107 60.000 0.00 0.00 42.87 3.61
608 1051 2.131023 CTAGGCTTCCCTTCCTTGGAT 58.869 52.381 0.00 0.00 42.87 3.41
609 1052 0.627986 AGGCTTCCCTTCCTTGGATG 59.372 55.000 0.00 0.00 38.74 3.51
611 1054 1.272704 GGCTTCCCTTCCTTGGATGTT 60.273 52.381 0.00 0.00 31.46 2.71
612 1055 2.025321 GGCTTCCCTTCCTTGGATGTTA 60.025 50.000 0.00 0.00 31.46 2.41
613 1056 3.563479 GGCTTCCCTTCCTTGGATGTTAA 60.563 47.826 0.00 0.00 31.46 2.01
614 1057 3.696548 GCTTCCCTTCCTTGGATGTTAAG 59.303 47.826 0.00 1.14 31.46 1.85
625 1068 6.543465 TCCTTGGATGTTAAGCATGTAGATTG 59.457 38.462 0.00 0.00 38.06 2.67
626 1069 6.543465 CCTTGGATGTTAAGCATGTAGATTGA 59.457 38.462 0.00 0.00 38.06 2.57
628 1071 8.523915 TTGGATGTTAAGCATGTAGATTGATT 57.476 30.769 0.00 0.00 38.06 2.57
631 1074 8.078596 GGATGTTAAGCATGTAGATTGATTTCC 58.921 37.037 0.00 0.00 38.06 3.13
632 1075 7.333528 TGTTAAGCATGTAGATTGATTTCCC 57.666 36.000 0.00 0.00 0.00 3.97
633 1076 6.321181 TGTTAAGCATGTAGATTGATTTCCCC 59.679 38.462 0.00 0.00 0.00 4.81
636 1079 4.166725 AGCATGTAGATTGATTTCCCCTGA 59.833 41.667 0.00 0.00 0.00 3.86
638 1081 5.688500 GCATGTAGATTGATTTCCCCTGAGA 60.689 44.000 0.00 0.00 0.00 3.27
639 1082 6.359804 CATGTAGATTGATTTCCCCTGAGAA 58.640 40.000 0.00 0.00 0.00 2.87
640 1083 6.387192 TGTAGATTGATTTCCCCTGAGAAA 57.613 37.500 0.00 0.00 39.92 2.52
642 1085 5.527026 AGATTGATTTCCCCTGAGAAAGT 57.473 39.130 0.00 0.00 39.04 2.66
644 1087 7.032598 AGATTGATTTCCCCTGAGAAAGTTA 57.967 36.000 0.00 0.00 39.04 2.24
645 1088 7.115414 AGATTGATTTCCCCTGAGAAAGTTAG 58.885 38.462 0.00 0.00 39.04 2.34
647 1090 3.434940 TTTCCCCTGAGAAAGTTAGGC 57.565 47.619 0.00 0.00 32.12 3.93
649 1092 2.632537 TCCCCTGAGAAAGTTAGGCTT 58.367 47.619 0.00 0.00 39.52 4.35
664 1115 0.332972 GGCTTCCCTTCCTTGGATGT 59.667 55.000 0.00 0.00 31.46 3.06
691 1142 0.392461 GTCCGGCAGCTATGTGGAAA 60.392 55.000 0.00 0.00 35.66 3.13
692 1143 0.326595 TCCGGCAGCTATGTGGAAAA 59.673 50.000 0.00 0.00 32.35 2.29
693 1144 1.064758 TCCGGCAGCTATGTGGAAAAT 60.065 47.619 0.00 0.00 32.35 1.82
694 1145 2.171659 TCCGGCAGCTATGTGGAAAATA 59.828 45.455 0.00 0.00 32.35 1.40
725 1211 4.049186 CGTGCACTTAACAGTCTGTTAGT 58.951 43.478 21.57 18.44 42.93 2.24
778 1299 5.644206 TGCTGCCGTTTGTTTATTATCTACA 59.356 36.000 0.00 0.00 0.00 2.74
800 2008 6.240894 ACAATCTGTAGATGGCTTTTTCTCA 58.759 36.000 0.00 0.00 34.49 3.27
908 2186 5.528690 AGCATGCACCTAAATATATATGGCG 59.471 40.000 21.98 0.00 0.00 5.69
909 2187 5.296780 GCATGCACCTAAATATATATGGCGT 59.703 40.000 14.21 0.00 0.00 5.68
910 2188 6.718388 CATGCACCTAAATATATATGGCGTG 58.282 40.000 0.00 2.76 0.00 5.34
1104 2476 0.719015 AGATCCAGGACAAGGAGGGA 59.281 55.000 0.00 0.00 38.83 4.20
1478 12087 1.476488 GTAATTGCCCTGGCGTTTGAT 59.524 47.619 3.32 0.00 45.51 2.57
1480 12089 1.322538 ATTGCCCTGGCGTTTGATCC 61.323 55.000 3.32 0.00 45.51 3.36
1481 12090 2.361104 GCCCTGGCGTTTGATCCA 60.361 61.111 0.00 0.00 0.00 3.41
1483 12092 2.046285 CCCTGGCGTTTGATCCACC 61.046 63.158 0.00 0.00 0.00 4.61
1484 12093 2.046285 CCTGGCGTTTGATCCACCC 61.046 63.158 0.00 0.00 0.00 4.61
1485 12094 1.002134 CTGGCGTTTGATCCACCCT 60.002 57.895 0.00 0.00 0.00 4.34
1487 12096 0.608035 TGGCGTTTGATCCACCCTTC 60.608 55.000 0.00 0.00 0.00 3.46
1488 12097 0.608035 GGCGTTTGATCCACCCTTCA 60.608 55.000 0.00 0.00 0.00 3.02
1489 12098 0.521735 GCGTTTGATCCACCCTTCAC 59.478 55.000 0.00 0.00 0.00 3.18
1490 12099 1.890876 CGTTTGATCCACCCTTCACA 58.109 50.000 0.00 0.00 0.00 3.58
1491 12100 2.436417 CGTTTGATCCACCCTTCACAT 58.564 47.619 0.00 0.00 0.00 3.21
1492 12101 2.162208 CGTTTGATCCACCCTTCACATG 59.838 50.000 0.00 0.00 0.00 3.21
1493 12102 2.493278 GTTTGATCCACCCTTCACATGG 59.507 50.000 0.00 0.00 34.58 3.66
1499 12108 0.962356 CACCCTTCACATGGTGCTCC 60.962 60.000 0.00 0.00 44.98 4.70
1500 12109 1.746615 CCCTTCACATGGTGCTCCG 60.747 63.158 0.00 0.00 36.30 4.63
1501 12110 1.003355 CCTTCACATGGTGCTCCGT 60.003 57.895 0.00 0.00 36.30 4.69
1503 12112 0.036952 CTTCACATGGTGCTCCGTCT 60.037 55.000 0.00 0.00 36.30 4.18
1504 12113 0.037326 TTCACATGGTGCTCCGTCTC 60.037 55.000 0.00 0.00 36.30 3.36
1505 12114 1.448540 CACATGGTGCTCCGTCTCC 60.449 63.158 0.00 0.00 36.30 3.71
1507 12116 2.680352 ATGGTGCTCCGTCTCCGT 60.680 61.111 0.00 0.00 36.30 4.69
1509 12118 4.436998 GGTGCTCCGTCTCCGTGG 62.437 72.222 0.00 0.00 0.00 4.94
1510 12119 3.681835 GTGCTCCGTCTCCGTGGT 61.682 66.667 0.00 0.00 0.00 4.16
1511 12120 3.680786 TGCTCCGTCTCCGTGGTG 61.681 66.667 0.00 0.00 0.00 4.17
1512 12121 3.681835 GCTCCGTCTCCGTGGTGT 61.682 66.667 0.00 0.00 0.00 4.16
1513 12122 2.258591 CTCCGTCTCCGTGGTGTG 59.741 66.667 0.00 0.00 0.00 3.82
1514 12123 3.282745 CTCCGTCTCCGTGGTGTGG 62.283 68.421 0.00 0.00 0.00 4.17
1515 12124 3.612681 CCGTCTCCGTGGTGTGGT 61.613 66.667 0.00 0.00 0.00 4.16
1516 12125 2.355837 CGTCTCCGTGGTGTGGTG 60.356 66.667 0.00 0.00 0.00 4.17
1517 12126 2.030562 GTCTCCGTGGTGTGGTGG 59.969 66.667 0.00 0.00 0.00 4.61
1518 12127 2.445085 TCTCCGTGGTGTGGTGGT 60.445 61.111 0.00 0.00 0.00 4.16
1519 12128 2.030562 CTCCGTGGTGTGGTGGTC 59.969 66.667 0.00 0.00 0.00 4.02
1520 12129 3.530910 CTCCGTGGTGTGGTGGTCC 62.531 68.421 0.00 0.00 0.00 4.46
1521 12130 4.980805 CCGTGGTGTGGTGGTCCG 62.981 72.222 0.00 0.00 36.30 4.79
1522 12131 4.230002 CGTGGTGTGGTGGTCCGT 62.230 66.667 0.00 0.00 36.30 4.69
1523 12132 2.858862 CGTGGTGTGGTGGTCCGTA 61.859 63.158 0.00 0.00 36.30 4.02
1524 12133 1.446791 GTGGTGTGGTGGTCCGTAA 59.553 57.895 0.00 0.00 36.30 3.18
1525 12134 0.035739 GTGGTGTGGTGGTCCGTAAT 59.964 55.000 0.00 0.00 36.30 1.89
1526 12135 0.766131 TGGTGTGGTGGTCCGTAATT 59.234 50.000 0.00 0.00 36.30 1.40
1527 12136 1.161843 GGTGTGGTGGTCCGTAATTG 58.838 55.000 0.00 0.00 36.30 2.32
1528 12137 0.519961 GTGTGGTGGTCCGTAATTGC 59.480 55.000 0.00 0.00 36.30 3.56
1529 12138 0.606944 TGTGGTGGTCCGTAATTGCC 60.607 55.000 0.00 0.00 36.30 4.52
1530 12139 1.001887 TGGTGGTCCGTAATTGCCC 60.002 57.895 0.00 0.00 36.30 5.36
1534 12143 2.119029 GGTCCGTAATTGCCCTGGC 61.119 63.158 0.00 0.00 42.35 4.85
1536 12145 2.437716 CCGTAATTGCCCTGGCGT 60.438 61.111 3.32 0.00 45.51 5.68
1579 12188 0.591659 TCTCGTTCGTGTCAGTCCTG 59.408 55.000 0.00 0.00 0.00 3.86
1656 12292 2.839629 TGGCACAGCAGTATCGTTG 58.160 52.632 0.00 0.00 0.00 4.10
1657 12293 1.298157 TGGCACAGCAGTATCGTTGC 61.298 55.000 0.00 0.00 41.83 4.17
1700 12338 5.380651 CAGATAAATCTGCTTGCGCTAATC 58.619 41.667 9.73 0.00 46.63 1.75
1737 12375 6.923012 TGTATATTGTGCTTGAATTGCTTGT 58.077 32.000 0.00 0.00 0.00 3.16
1740 12378 7.733402 ATATTGTGCTTGAATTGCTTGTTTT 57.267 28.000 0.00 0.00 0.00 2.43
1745 12411 4.044426 GCTTGAATTGCTTGTTTTCTCGT 58.956 39.130 0.00 0.00 0.00 4.18
1747 12413 3.371168 TGAATTGCTTGTTTTCTCGTGC 58.629 40.909 0.00 0.00 0.00 5.34
1751 12417 0.668535 GCTTGTTTTCTCGTGCCCTT 59.331 50.000 0.00 0.00 0.00 3.95
1757 12423 4.138290 TGTTTTCTCGTGCCCTTTATGAA 58.862 39.130 0.00 0.00 0.00 2.57
1774 12449 7.201582 CCTTTATGAATTCCTTGAATTGCTTGC 60.202 37.037 6.78 0.00 41.56 4.01
1777 12452 4.992319 TGAATTCCTTGAATTGCTTGCTTG 59.008 37.500 6.78 0.00 41.56 4.01
1790 12465 3.003585 TGCTTGCTTGATATATTGTGGCG 59.996 43.478 0.00 0.00 0.00 5.69
1793 12468 5.574891 TTGCTTGATATATTGTGGCGTTT 57.425 34.783 0.00 0.00 0.00 3.60
1794 12469 6.685527 TTGCTTGATATATTGTGGCGTTTA 57.314 33.333 0.00 0.00 0.00 2.01
1795 12470 6.875948 TGCTTGATATATTGTGGCGTTTAT 57.124 33.333 0.00 0.00 0.00 1.40
1802 12484 3.764885 ATTGTGGCGTTTATCTTCTGC 57.235 42.857 0.00 0.00 0.00 4.26
1815 12497 8.085296 CGTTTATCTTCTGCACTAGATCCTAAT 58.915 37.037 8.66 0.00 34.80 1.73
1820 12502 7.721402 TCTTCTGCACTAGATCCTAATTTCTC 58.279 38.462 0.00 0.00 34.80 2.87
1822 12504 7.048629 TCTGCACTAGATCCTAATTTCTCAG 57.951 40.000 0.00 0.00 0.00 3.35
1823 12505 6.041409 TCTGCACTAGATCCTAATTTCTCAGG 59.959 42.308 0.00 0.00 0.00 3.86
1824 12506 5.663106 TGCACTAGATCCTAATTTCTCAGGT 59.337 40.000 0.00 0.00 33.37 4.00
1825 12507 6.156949 TGCACTAGATCCTAATTTCTCAGGTT 59.843 38.462 0.00 0.00 33.37 3.50
1826 12508 6.704050 GCACTAGATCCTAATTTCTCAGGTTC 59.296 42.308 0.00 0.00 33.37 3.62
1827 12509 7.418483 GCACTAGATCCTAATTTCTCAGGTTCT 60.418 40.741 0.00 9.50 41.64 3.01
1828 12510 7.925483 CACTAGATCCTAATTTCTCAGGTTCTG 59.075 40.741 12.84 7.70 39.96 3.02
1851 12544 3.433343 TGTTCAGATTTGGGTGATGCAT 58.567 40.909 0.00 0.00 0.00 3.96
1855 12548 6.014755 TGTTCAGATTTGGGTGATGCATTTTA 60.015 34.615 0.00 0.00 0.00 1.52
1856 12549 6.795144 TCAGATTTGGGTGATGCATTTTAT 57.205 33.333 0.00 0.00 0.00 1.40
1857 12550 7.894753 TCAGATTTGGGTGATGCATTTTATA 57.105 32.000 0.00 0.00 0.00 0.98
1858 12551 7.715657 TCAGATTTGGGTGATGCATTTTATAC 58.284 34.615 0.00 0.00 0.00 1.47
1859 12552 7.560991 TCAGATTTGGGTGATGCATTTTATACT 59.439 33.333 0.00 0.00 0.00 2.12
1860 12553 7.864379 CAGATTTGGGTGATGCATTTTATACTC 59.136 37.037 0.00 0.00 0.00 2.59
1861 12554 6.463995 TTTGGGTGATGCATTTTATACTCC 57.536 37.500 0.00 0.00 0.00 3.85
1863 12556 4.079500 TGGGTGATGCATTTTATACTCCCA 60.080 41.667 15.84 15.84 38.79 4.37
1865 12558 5.010012 GGGTGATGCATTTTATACTCCCAAG 59.990 44.000 13.36 0.00 0.00 3.61
1866 12559 5.594317 GGTGATGCATTTTATACTCCCAAGT 59.406 40.000 0.00 0.00 39.66 3.16
1867 12560 6.770785 GGTGATGCATTTTATACTCCCAAGTA 59.229 38.462 0.00 0.00 42.10 2.24
1869 12562 8.850156 GTGATGCATTTTATACTCCCAAGTATT 58.150 33.333 0.00 0.00 44.62 1.89
1870 12563 9.420118 TGATGCATTTTATACTCCCAAGTATTT 57.580 29.630 0.00 0.00 44.62 1.40
1871 12564 9.899226 GATGCATTTTATACTCCCAAGTATTTC 57.101 33.333 0.00 0.00 44.62 2.17
1872 12565 9.646522 ATGCATTTTATACTCCCAAGTATTTCT 57.353 29.630 0.00 0.00 44.62 2.52
1873 12566 8.902806 TGCATTTTATACTCCCAAGTATTTCTG 58.097 33.333 3.61 0.30 44.62 3.02
1874 12567 8.352942 GCATTTTATACTCCCAAGTATTTCTGG 58.647 37.037 3.61 0.00 44.62 3.86
1875 12568 9.627123 CATTTTATACTCCCAAGTATTTCTGGA 57.373 33.333 3.61 0.00 44.62 3.86
1876 12569 9.628500 ATTTTATACTCCCAAGTATTTCTGGAC 57.372 33.333 3.61 0.00 44.62 4.02
1877 12570 3.611766 ACTCCCAAGTATTTCTGGACG 57.388 47.619 0.00 0.00 32.59 4.79
1878 12571 2.236395 ACTCCCAAGTATTTCTGGACGG 59.764 50.000 0.00 0.00 32.59 4.79
1879 12572 2.500098 CTCCCAAGTATTTCTGGACGGA 59.500 50.000 0.00 0.00 0.00 4.69
1880 12573 2.500098 TCCCAAGTATTTCTGGACGGAG 59.500 50.000 0.00 0.00 0.00 4.63
1881 12574 2.420129 CCCAAGTATTTCTGGACGGAGG 60.420 54.545 0.00 0.00 0.00 4.30
1882 12575 2.420129 CCAAGTATTTCTGGACGGAGGG 60.420 54.545 0.00 0.00 0.00 4.30
1883 12576 2.500098 CAAGTATTTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
1884 12577 2.389715 AGTATTTCTGGACGGAGGGAG 58.610 52.381 0.00 0.00 0.00 4.30
1885 12578 2.108970 GTATTTCTGGACGGAGGGAGT 58.891 52.381 0.00 0.00 0.00 3.85
1886 12579 2.544844 ATTTCTGGACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
1887 12580 1.553706 TTTCTGGACGGAGGGAGTAC 58.446 55.000 0.00 0.00 0.00 2.73
1888 12581 0.702902 TTCTGGACGGAGGGAGTACT 59.297 55.000 0.00 0.00 0.00 2.73
1892 12585 1.340795 TGGACGGAGGGAGTACTTCTC 60.341 57.143 14.97 14.97 42.07 2.87
1921 12614 3.005050 CCTGCTGCTGATTGTTTCTTGAA 59.995 43.478 8.20 0.00 0.00 2.69
1933 12626 6.639632 TTGTTTCTTGAAATCCTTCTGGAG 57.360 37.500 0.00 0.00 46.91 3.86
1939 12632 4.581309 TGAAATCCTTCTGGAGCTGAAT 57.419 40.909 0.00 0.00 46.91 2.57
1952 12645 3.129988 GGAGCTGAATAATGCAAGTTGCT 59.870 43.478 27.17 11.83 45.31 3.91
1954 12647 4.015084 AGCTGAATAATGCAAGTTGCTCT 58.985 39.130 27.17 16.62 45.31 4.09
1955 12648 4.461781 AGCTGAATAATGCAAGTTGCTCTT 59.538 37.500 27.17 21.23 45.31 2.85
1969 12662 8.665175 CAAGTTGCTCTTGTATGTTATTTCTG 57.335 34.615 11.95 0.00 45.89 3.02
1970 12663 7.383102 AGTTGCTCTTGTATGTTATTTCTGG 57.617 36.000 0.00 0.00 0.00 3.86
1971 12664 7.168219 AGTTGCTCTTGTATGTTATTTCTGGA 58.832 34.615 0.00 0.00 0.00 3.86
1972 12665 7.335422 AGTTGCTCTTGTATGTTATTTCTGGAG 59.665 37.037 0.00 0.00 0.00 3.86
1973 12666 5.586243 TGCTCTTGTATGTTATTTCTGGAGC 59.414 40.000 0.00 0.00 41.59 4.70
1974 12667 5.819901 GCTCTTGTATGTTATTTCTGGAGCT 59.180 40.000 0.00 0.00 39.20 4.09
1975 12668 6.238320 GCTCTTGTATGTTATTTCTGGAGCTG 60.238 42.308 0.00 0.00 39.20 4.24
1976 12669 6.946340 TCTTGTATGTTATTTCTGGAGCTGA 58.054 36.000 0.00 0.00 0.00 4.26
1977 12670 7.394016 TCTTGTATGTTATTTCTGGAGCTGAA 58.606 34.615 0.00 0.00 0.00 3.02
1978 12671 8.049117 TCTTGTATGTTATTTCTGGAGCTGAAT 58.951 33.333 0.00 0.00 0.00 2.57
1979 12672 9.330063 CTTGTATGTTATTTCTGGAGCTGAATA 57.670 33.333 0.00 0.00 0.00 1.75
1980 12673 9.679661 TTGTATGTTATTTCTGGAGCTGAATAA 57.320 29.630 0.00 0.00 0.00 1.40
1981 12674 9.851686 TGTATGTTATTTCTGGAGCTGAATAAT 57.148 29.630 0.00 0.00 0.00 1.28
1991 12684 8.455903 TCTGGAGCTGAATAATTTTATTCTGG 57.544 34.615 21.44 15.57 45.76 3.86
1992 12685 8.274322 TCTGGAGCTGAATAATTTTATTCTGGA 58.726 33.333 21.44 12.57 45.76 3.86
1993 12686 8.225603 TGGAGCTGAATAATTTTATTCTGGAC 57.774 34.615 21.44 12.01 45.76 4.02
1994 12687 8.055181 TGGAGCTGAATAATTTTATTCTGGACT 58.945 33.333 21.44 14.92 45.76 3.85
1995 12688 9.561069 GGAGCTGAATAATTTTATTCTGGACTA 57.439 33.333 21.44 5.68 45.76 2.59
1998 12691 9.617975 GCTGAATAATTTTATTCTGGACTATGC 57.382 33.333 21.44 11.54 45.76 3.14
1999 12692 9.817365 CTGAATAATTTTATTCTGGACTATGCG 57.183 33.333 18.82 0.00 45.76 4.73
2000 12693 9.337396 TGAATAATTTTATTCTGGACTATGCGT 57.663 29.630 18.82 0.00 45.76 5.24
2002 12695 9.950680 AATAATTTTATTCTGGACTATGCGTTG 57.049 29.630 0.00 0.00 0.00 4.10
2003 12696 7.391148 AATTTTATTCTGGACTATGCGTTGT 57.609 32.000 0.00 0.00 0.00 3.32
2004 12697 6.811253 TTTTATTCTGGACTATGCGTTGTT 57.189 33.333 0.00 0.00 0.00 2.83
2005 12698 5.794687 TTATTCTGGACTATGCGTTGTTG 57.205 39.130 0.00 0.00 0.00 3.33
2006 12699 2.831685 TCTGGACTATGCGTTGTTGT 57.168 45.000 0.00 0.00 0.00 3.32
2007 12700 2.412870 TCTGGACTATGCGTTGTTGTG 58.587 47.619 0.00 0.00 0.00 3.33
2008 12701 2.143122 CTGGACTATGCGTTGTTGTGT 58.857 47.619 0.00 0.00 0.00 3.72
2009 12702 2.139917 TGGACTATGCGTTGTTGTGTC 58.860 47.619 0.00 0.00 0.00 3.67
2013 12706 3.202906 ACTATGCGTTGTTGTGTCTTGT 58.797 40.909 0.00 0.00 0.00 3.16
2019 12712 2.158645 CGTTGTTGTGTCTTGTGTGACA 59.841 45.455 0.00 0.00 43.72 3.58
2059 12755 1.333619 AGTTTTTGCAGCGTGTGTAGG 59.666 47.619 0.00 0.00 0.00 3.18
2060 12756 1.064952 GTTTTTGCAGCGTGTGTAGGT 59.935 47.619 0.00 0.00 0.00 3.08
2061 12757 0.660488 TTTTGCAGCGTGTGTAGGTG 59.340 50.000 0.00 0.00 39.81 4.00
2062 12758 0.462937 TTTGCAGCGTGTGTAGGTGT 60.463 50.000 0.00 0.00 39.11 4.16
2063 12759 0.462937 TTGCAGCGTGTGTAGGTGTT 60.463 50.000 0.00 0.00 39.11 3.32
2064 12760 0.389757 TGCAGCGTGTGTAGGTGTTA 59.610 50.000 0.00 0.00 39.11 2.41
2065 12761 1.001520 TGCAGCGTGTGTAGGTGTTAT 59.998 47.619 0.00 0.00 39.11 1.89
2066 12762 2.231721 TGCAGCGTGTGTAGGTGTTATA 59.768 45.455 0.00 0.00 39.11 0.98
2067 12763 2.858344 GCAGCGTGTGTAGGTGTTATAG 59.142 50.000 0.00 0.00 39.11 1.31
2068 12764 3.675228 GCAGCGTGTGTAGGTGTTATAGT 60.675 47.826 0.00 0.00 39.11 2.12
2069 12765 3.857665 CAGCGTGTGTAGGTGTTATAGTG 59.142 47.826 0.00 0.00 32.96 2.74
2070 12766 3.508793 AGCGTGTGTAGGTGTTATAGTGT 59.491 43.478 0.00 0.00 0.00 3.55
2071 12767 3.611113 GCGTGTGTAGGTGTTATAGTGTG 59.389 47.826 0.00 0.00 0.00 3.82
2072 12768 4.616604 GCGTGTGTAGGTGTTATAGTGTGA 60.617 45.833 0.00 0.00 0.00 3.58
2073 12769 5.647589 CGTGTGTAGGTGTTATAGTGTGAT 58.352 41.667 0.00 0.00 0.00 3.06
2074 12770 6.678655 GCGTGTGTAGGTGTTATAGTGTGATA 60.679 42.308 0.00 0.00 0.00 2.15
2075 12771 7.423199 CGTGTGTAGGTGTTATAGTGTGATAT 58.577 38.462 0.00 0.00 0.00 1.63
2076 12772 8.562052 CGTGTGTAGGTGTTATAGTGTGATATA 58.438 37.037 0.00 0.00 0.00 0.86
2077 12773 9.894783 GTGTGTAGGTGTTATAGTGTGATATAG 57.105 37.037 0.00 0.00 0.00 1.31
2078 12774 9.636789 TGTGTAGGTGTTATAGTGTGATATAGT 57.363 33.333 0.00 0.00 0.00 2.12
2079 12775 9.894783 GTGTAGGTGTTATAGTGTGATATAGTG 57.105 37.037 0.00 0.00 0.00 2.74
2080 12776 9.074576 TGTAGGTGTTATAGTGTGATATAGTGG 57.925 37.037 0.00 0.00 0.00 4.00
2081 12777 6.994221 AGGTGTTATAGTGTGATATAGTGGC 58.006 40.000 0.00 0.00 0.00 5.01
2082 12778 6.553476 AGGTGTTATAGTGTGATATAGTGGCA 59.447 38.462 0.00 0.00 0.00 4.92
2083 12779 7.235606 AGGTGTTATAGTGTGATATAGTGGCAT 59.764 37.037 0.00 0.00 0.00 4.40
2084 12780 7.878127 GGTGTTATAGTGTGATATAGTGGCATT 59.122 37.037 0.00 0.00 0.00 3.56
2085 12781 9.273016 GTGTTATAGTGTGATATAGTGGCATTT 57.727 33.333 0.00 0.00 0.00 2.32
2086 12782 9.845740 TGTTATAGTGTGATATAGTGGCATTTT 57.154 29.630 0.00 0.00 0.00 1.82
2090 12786 7.325660 AGTGTGATATAGTGGCATTTTTCTG 57.674 36.000 0.00 0.00 0.00 3.02
2091 12787 6.319658 AGTGTGATATAGTGGCATTTTTCTGG 59.680 38.462 0.00 0.00 0.00 3.86
2092 12788 5.593909 TGTGATATAGTGGCATTTTTCTGGG 59.406 40.000 0.00 0.00 0.00 4.45
2093 12789 5.594317 GTGATATAGTGGCATTTTTCTGGGT 59.406 40.000 0.00 0.00 0.00 4.51
2094 12790 5.593909 TGATATAGTGGCATTTTTCTGGGTG 59.406 40.000 0.00 0.00 0.00 4.61
2095 12791 0.681175 AGTGGCATTTTTCTGGGTGC 59.319 50.000 0.00 0.00 36.88 5.01
2096 12792 0.681175 GTGGCATTTTTCTGGGTGCT 59.319 50.000 0.00 0.00 37.70 4.40
2097 12793 1.070601 GTGGCATTTTTCTGGGTGCTT 59.929 47.619 0.00 0.00 37.70 3.91
2098 12794 2.298729 GTGGCATTTTTCTGGGTGCTTA 59.701 45.455 0.00 0.00 37.70 3.09
2099 12795 3.055891 GTGGCATTTTTCTGGGTGCTTAT 60.056 43.478 0.00 0.00 37.70 1.73
2100 12796 3.582208 TGGCATTTTTCTGGGTGCTTATT 59.418 39.130 0.00 0.00 37.70 1.40
2101 12797 3.934579 GGCATTTTTCTGGGTGCTTATTG 59.065 43.478 0.00 0.00 37.70 1.90
2102 12798 4.563374 GGCATTTTTCTGGGTGCTTATTGT 60.563 41.667 0.00 0.00 37.70 2.71
2103 12799 5.337169 GGCATTTTTCTGGGTGCTTATTGTA 60.337 40.000 0.00 0.00 37.70 2.41
2104 12800 6.340522 GCATTTTTCTGGGTGCTTATTGTAT 58.659 36.000 0.00 0.00 34.85 2.29
2105 12801 6.476706 GCATTTTTCTGGGTGCTTATTGTATC 59.523 38.462 0.00 0.00 34.85 2.24
2106 12802 7.546358 CATTTTTCTGGGTGCTTATTGTATCA 58.454 34.615 0.00 0.00 0.00 2.15
2107 12803 7.531857 TTTTTCTGGGTGCTTATTGTATCAA 57.468 32.000 0.00 0.00 0.00 2.57
2108 12804 6.509418 TTTCTGGGTGCTTATTGTATCAAC 57.491 37.500 0.00 0.00 0.00 3.18
2109 12805 5.172687 TCTGGGTGCTTATTGTATCAACA 57.827 39.130 0.00 0.00 0.00 3.33
2110 12806 5.754782 TCTGGGTGCTTATTGTATCAACAT 58.245 37.500 0.00 0.00 34.97 2.71
2111 12807 6.186957 TCTGGGTGCTTATTGTATCAACATT 58.813 36.000 0.00 0.00 34.97 2.71
2112 12808 6.095300 TCTGGGTGCTTATTGTATCAACATTG 59.905 38.462 0.00 0.00 34.97 2.82
2113 12809 5.043248 GGGTGCTTATTGTATCAACATTGC 58.957 41.667 0.00 0.00 34.97 3.56
2114 12810 5.394005 GGGTGCTTATTGTATCAACATTGCA 60.394 40.000 0.00 0.00 34.97 4.08
2115 12811 6.275335 GGTGCTTATTGTATCAACATTGCAT 58.725 36.000 0.00 0.00 34.97 3.96
2116 12812 6.757947 GGTGCTTATTGTATCAACATTGCATT 59.242 34.615 0.00 0.00 34.97 3.56
2117 12813 7.278424 GGTGCTTATTGTATCAACATTGCATTT 59.722 33.333 0.00 0.00 34.97 2.32
2118 12814 8.111836 GTGCTTATTGTATCAACATTGCATTTG 58.888 33.333 0.00 0.00 34.97 2.32
2119 12815 7.818446 TGCTTATTGTATCAACATTGCATTTGT 59.182 29.630 0.00 0.00 34.97 2.83
2120 12816 8.111836 GCTTATTGTATCAACATTGCATTTGTG 58.888 33.333 3.79 0.00 34.97 3.33
2121 12817 9.356433 CTTATTGTATCAACATTGCATTTGTGA 57.644 29.630 3.79 4.83 34.97 3.58
2122 12818 7.821595 ATTGTATCAACATTGCATTTGTGAG 57.178 32.000 3.79 1.41 34.97 3.51
2123 12819 6.572167 TGTATCAACATTGCATTTGTGAGA 57.428 33.333 3.79 6.04 0.00 3.27
2124 12820 6.614160 TGTATCAACATTGCATTTGTGAGAG 58.386 36.000 3.79 0.00 0.00 3.20
2125 12821 5.717078 ATCAACATTGCATTTGTGAGAGT 57.283 34.783 3.79 0.00 0.00 3.24
2126 12822 4.862350 TCAACATTGCATTTGTGAGAGTG 58.138 39.130 3.79 0.00 0.00 3.51
2127 12823 4.579753 TCAACATTGCATTTGTGAGAGTGA 59.420 37.500 3.79 1.71 0.00 3.41
2128 12824 4.761235 ACATTGCATTTGTGAGAGTGAG 57.239 40.909 2.26 0.00 0.00 3.51
2129 12825 3.057736 ACATTGCATTTGTGAGAGTGAGC 60.058 43.478 2.26 0.00 0.00 4.26
2130 12826 2.556144 TGCATTTGTGAGAGTGAGCT 57.444 45.000 0.00 0.00 0.00 4.09
2131 12827 2.854963 TGCATTTGTGAGAGTGAGCTT 58.145 42.857 0.00 0.00 0.00 3.74
2132 12828 2.810274 TGCATTTGTGAGAGTGAGCTTC 59.190 45.455 0.00 0.00 0.00 3.86
2133 12829 3.072944 GCATTTGTGAGAGTGAGCTTCT 58.927 45.455 0.00 0.00 0.00 2.85
2134 12830 4.248859 GCATTTGTGAGAGTGAGCTTCTA 58.751 43.478 0.00 0.00 0.00 2.10
2135 12831 4.874966 GCATTTGTGAGAGTGAGCTTCTAT 59.125 41.667 0.00 0.00 0.00 1.98
2136 12832 5.006552 GCATTTGTGAGAGTGAGCTTCTATC 59.993 44.000 7.31 7.31 0.00 2.08
2137 12833 4.362932 TTGTGAGAGTGAGCTTCTATCG 57.637 45.455 8.98 0.00 0.00 2.92
2138 12834 3.348119 TGTGAGAGTGAGCTTCTATCGT 58.652 45.455 8.98 0.00 0.00 3.73
2139 12835 4.514401 TGTGAGAGTGAGCTTCTATCGTA 58.486 43.478 8.98 0.75 0.00 3.43
2140 12836 4.941873 TGTGAGAGTGAGCTTCTATCGTAA 59.058 41.667 8.98 0.00 0.00 3.18
2141 12837 5.414765 TGTGAGAGTGAGCTTCTATCGTAAA 59.585 40.000 8.98 0.00 0.00 2.01
2142 12838 5.968848 GTGAGAGTGAGCTTCTATCGTAAAG 59.031 44.000 8.98 0.00 0.00 1.85
2143 12839 5.880887 TGAGAGTGAGCTTCTATCGTAAAGA 59.119 40.000 8.98 0.00 0.00 2.52
2144 12840 6.544197 TGAGAGTGAGCTTCTATCGTAAAGAT 59.456 38.462 8.98 0.00 43.19 2.40
2145 12841 6.734137 AGAGTGAGCTTCTATCGTAAAGATG 58.266 40.000 0.00 0.00 40.40 2.90
2146 12842 6.320164 AGAGTGAGCTTCTATCGTAAAGATGT 59.680 38.462 0.00 0.00 40.40 3.06
2147 12843 6.500041 AGTGAGCTTCTATCGTAAAGATGTC 58.500 40.000 0.00 0.00 40.40 3.06
2148 12844 6.095580 AGTGAGCTTCTATCGTAAAGATGTCA 59.904 38.462 0.00 0.00 40.40 3.58
2149 12845 6.752351 GTGAGCTTCTATCGTAAAGATGTCAA 59.248 38.462 0.00 0.00 40.40 3.18
2150 12846 6.752351 TGAGCTTCTATCGTAAAGATGTCAAC 59.248 38.462 0.00 0.00 40.40 3.18
2151 12847 6.868622 AGCTTCTATCGTAAAGATGTCAACT 58.131 36.000 0.00 0.00 40.40 3.16
2152 12848 7.324178 AGCTTCTATCGTAAAGATGTCAACTT 58.676 34.615 0.00 0.00 40.40 2.66
2153 12849 7.489757 AGCTTCTATCGTAAAGATGTCAACTTC 59.510 37.037 0.00 0.00 40.40 3.01
2154 12850 7.489757 GCTTCTATCGTAAAGATGTCAACTTCT 59.510 37.037 0.00 0.00 40.40 2.85
2160 12856 8.575565 TCGTAAAGATGTCAACTTCTATATGC 57.424 34.615 0.00 0.00 31.18 3.14
2161 12857 8.194769 TCGTAAAGATGTCAACTTCTATATGCA 58.805 33.333 0.00 0.00 31.18 3.96
2162 12858 8.817100 CGTAAAGATGTCAACTTCTATATGCAA 58.183 33.333 0.00 0.00 31.18 4.08
2182 12878 8.944212 ATGCAAATTTACTAGTTTTACGTGTC 57.056 30.769 0.00 0.00 0.00 3.67
2183 12879 8.145316 TGCAAATTTACTAGTTTTACGTGTCT 57.855 30.769 0.00 0.00 0.00 3.41
2184 12880 9.258826 TGCAAATTTACTAGTTTTACGTGTCTA 57.741 29.630 0.00 0.00 0.00 2.59
2193 12889 9.485206 ACTAGTTTTACGTGTCTAATTTGATGT 57.515 29.630 0.00 0.00 0.00 3.06
2196 12892 8.832521 AGTTTTACGTGTCTAATTTGATGTTGA 58.167 29.630 0.00 0.00 0.00 3.18
2197 12893 9.607285 GTTTTACGTGTCTAATTTGATGTTGAT 57.393 29.630 0.00 0.00 0.00 2.57
2198 12894 9.605955 TTTTACGTGTCTAATTTGATGTTGATG 57.394 29.630 0.00 0.00 0.00 3.07
2199 12895 8.541133 TTACGTGTCTAATTTGATGTTGATGA 57.459 30.769 0.00 0.00 0.00 2.92
2200 12896 7.615582 ACGTGTCTAATTTGATGTTGATGAT 57.384 32.000 0.00 0.00 0.00 2.45
2201 12897 7.466805 ACGTGTCTAATTTGATGTTGATGATG 58.533 34.615 0.00 0.00 0.00 3.07
2202 12898 7.119699 ACGTGTCTAATTTGATGTTGATGATGT 59.880 33.333 0.00 0.00 0.00 3.06
2203 12899 7.964559 CGTGTCTAATTTGATGTTGATGATGTT 59.035 33.333 0.00 0.00 0.00 2.71
2272 12968 8.992073 ACTTCAAATATTTCAAAATGGAAGTGC 58.008 29.630 19.19 0.00 36.57 4.40
2273 12969 8.899427 TTCAAATATTTCAAAATGGAAGTGCA 57.101 26.923 0.00 0.00 0.00 4.57
2274 12970 8.899427 TCAAATATTTCAAAATGGAAGTGCAA 57.101 26.923 0.00 0.00 0.00 4.08
2275 12971 9.334947 TCAAATATTTCAAAATGGAAGTGCAAA 57.665 25.926 0.00 0.00 0.00 3.68
2276 12972 9.384682 CAAATATTTCAAAATGGAAGTGCAAAC 57.615 29.630 0.00 0.00 0.00 2.93
2277 12973 8.674263 AATATTTCAAAATGGAAGTGCAAACA 57.326 26.923 0.00 0.00 0.00 2.83
2278 12974 6.607735 ATTTCAAAATGGAAGTGCAAACAG 57.392 33.333 0.00 0.00 0.00 3.16
2279 12975 4.057406 TCAAAATGGAAGTGCAAACAGG 57.943 40.909 0.00 0.00 0.00 4.00
2280 12976 3.703556 TCAAAATGGAAGTGCAAACAGGA 59.296 39.130 0.00 0.00 0.00 3.86
2281 12977 4.344679 TCAAAATGGAAGTGCAAACAGGAT 59.655 37.500 0.00 0.00 0.00 3.24
2282 12978 3.947910 AATGGAAGTGCAAACAGGATG 57.052 42.857 0.00 0.00 46.00 3.51
2295 12991 2.827800 CAGGATGTCCTCGTGCATAT 57.172 50.000 0.00 0.00 46.65 1.78
2296 12992 3.942130 CAGGATGTCCTCGTGCATATA 57.058 47.619 0.00 0.00 46.65 0.86
2297 12993 3.579709 CAGGATGTCCTCGTGCATATAC 58.420 50.000 0.00 0.00 46.65 1.47
2298 12994 3.005791 CAGGATGTCCTCGTGCATATACA 59.994 47.826 0.00 0.00 46.65 2.29
2299 12995 3.834813 AGGATGTCCTCGTGCATATACAT 59.165 43.478 0.00 0.00 44.77 2.29
2300 12996 3.928992 GGATGTCCTCGTGCATATACATG 59.071 47.826 7.55 0.00 35.07 3.21
2301 12997 3.385193 TGTCCTCGTGCATATACATGG 57.615 47.619 0.00 0.00 32.36 3.66
2302 12998 2.962421 TGTCCTCGTGCATATACATGGA 59.038 45.455 0.00 0.00 32.36 3.41
2303 12999 3.578282 TGTCCTCGTGCATATACATGGAT 59.422 43.478 0.00 0.00 34.73 3.41
2304 13000 3.928992 GTCCTCGTGCATATACATGGATG 59.071 47.826 0.00 0.33 40.01 3.51
2306 13002 3.593096 CTCGTGCATATACATGGATGCT 58.407 45.455 22.34 1.02 46.98 3.79
2307 13003 3.999001 CTCGTGCATATACATGGATGCTT 59.001 43.478 22.34 0.00 46.98 3.91
2308 13004 5.146010 TCGTGCATATACATGGATGCTTA 57.854 39.130 22.34 10.68 46.98 3.09
2309 13005 4.929211 TCGTGCATATACATGGATGCTTAC 59.071 41.667 22.34 15.31 46.98 2.34
2310 13006 4.201618 CGTGCATATACATGGATGCTTACG 60.202 45.833 22.34 20.40 46.98 3.18
2311 13007 4.093408 GTGCATATACATGGATGCTTACGG 59.907 45.833 22.34 0.06 46.98 4.02
2312 13008 4.253685 GCATATACATGGATGCTTACGGT 58.746 43.478 17.49 0.00 44.15 4.83
2313 13009 4.093408 GCATATACATGGATGCTTACGGTG 59.907 45.833 17.49 0.41 44.15 4.94
2314 13010 1.948104 TACATGGATGCTTACGGTGC 58.052 50.000 0.00 0.00 0.00 5.01
2315 13011 0.035534 ACATGGATGCTTACGGTGCA 60.036 50.000 0.00 2.05 44.95 4.57
2319 13015 4.559502 ATGCTTACGGTGCATCCC 57.440 55.556 6.28 0.00 46.80 3.85
2320 13016 1.607071 ATGCTTACGGTGCATCCCA 59.393 52.632 6.28 0.00 46.80 4.37
2321 13017 0.464373 ATGCTTACGGTGCATCCCAG 60.464 55.000 6.28 0.00 46.80 4.45
2322 13018 1.819632 GCTTACGGTGCATCCCAGG 60.820 63.158 0.00 0.00 0.00 4.45
2323 13019 1.819632 CTTACGGTGCATCCCAGGC 60.820 63.158 0.00 0.00 0.00 4.85
2324 13020 2.535485 CTTACGGTGCATCCCAGGCA 62.535 60.000 0.00 0.00 39.32 4.75
2329 13025 3.323622 TGCATCCCAGGCACCTAG 58.676 61.111 0.00 0.00 36.11 3.02
2330 13026 1.616327 TGCATCCCAGGCACCTAGT 60.616 57.895 0.00 0.00 36.11 2.57
2331 13027 1.153086 GCATCCCAGGCACCTAGTG 60.153 63.158 0.00 0.00 36.51 2.74
2332 13028 1.528824 CATCCCAGGCACCTAGTGG 59.471 63.158 0.00 0.00 39.83 4.00
2335 13031 3.820425 CCAGGCACCTAGTGGGAA 58.180 61.111 0.00 0.00 38.76 3.97
2336 13032 2.074967 CCAGGCACCTAGTGGGAAA 58.925 57.895 0.00 0.00 38.76 3.13
2337 13033 0.404040 CCAGGCACCTAGTGGGAAAA 59.596 55.000 0.00 0.00 38.76 2.29
2338 13034 1.614317 CCAGGCACCTAGTGGGAAAAG 60.614 57.143 0.00 0.00 38.76 2.27
2339 13035 0.698818 AGGCACCTAGTGGGAAAAGG 59.301 55.000 0.00 0.00 38.76 3.11
2340 13036 0.696501 GGCACCTAGTGGGAAAAGGA 59.303 55.000 0.00 0.00 38.76 3.36
2341 13037 1.340114 GGCACCTAGTGGGAAAAGGAG 60.340 57.143 0.00 0.00 38.76 3.69
2342 13038 1.950954 GCACCTAGTGGGAAAAGGAGC 60.951 57.143 0.00 0.00 39.30 4.70
2343 13039 1.351017 CACCTAGTGGGAAAAGGAGCA 59.649 52.381 0.00 0.00 38.76 4.26
2344 13040 2.025887 CACCTAGTGGGAAAAGGAGCAT 60.026 50.000 0.00 0.00 38.76 3.79
2345 13041 3.199946 CACCTAGTGGGAAAAGGAGCATA 59.800 47.826 0.00 0.00 38.76 3.14
2346 13042 4.047883 ACCTAGTGGGAAAAGGAGCATAT 58.952 43.478 0.00 0.00 38.76 1.78
2347 13043 4.478686 ACCTAGTGGGAAAAGGAGCATATT 59.521 41.667 0.00 0.00 38.76 1.28
2348 13044 5.670361 ACCTAGTGGGAAAAGGAGCATATTA 59.330 40.000 0.00 0.00 38.76 0.98
2349 13045 6.159751 ACCTAGTGGGAAAAGGAGCATATTAA 59.840 38.462 0.00 0.00 38.76 1.40
2350 13046 6.486993 CCTAGTGGGAAAAGGAGCATATTAAC 59.513 42.308 0.00 0.00 37.23 2.01
2351 13047 5.826643 AGTGGGAAAAGGAGCATATTAACA 58.173 37.500 0.00 0.00 0.00 2.41
2352 13048 5.652452 AGTGGGAAAAGGAGCATATTAACAC 59.348 40.000 0.00 0.00 0.00 3.32
2353 13049 5.417580 GTGGGAAAAGGAGCATATTAACACA 59.582 40.000 0.00 0.00 0.00 3.72
2354 13050 6.013379 TGGGAAAAGGAGCATATTAACACAA 58.987 36.000 0.00 0.00 0.00 3.33
2355 13051 6.071616 TGGGAAAAGGAGCATATTAACACAAC 60.072 38.462 0.00 0.00 0.00 3.32
2356 13052 6.071616 GGGAAAAGGAGCATATTAACACAACA 60.072 38.462 0.00 0.00 0.00 3.33
2357 13053 7.363793 GGGAAAAGGAGCATATTAACACAACAT 60.364 37.037 0.00 0.00 0.00 2.71
2358 13054 7.702348 GGAAAAGGAGCATATTAACACAACATC 59.298 37.037 0.00 0.00 0.00 3.06
2359 13055 7.701539 AAAGGAGCATATTAACACAACATCA 57.298 32.000 0.00 0.00 0.00 3.07
2360 13056 7.701539 AAGGAGCATATTAACACAACATCAA 57.298 32.000 0.00 0.00 0.00 2.57
2361 13057 7.886629 AGGAGCATATTAACACAACATCAAT 57.113 32.000 0.00 0.00 0.00 2.57
2362 13058 7.934457 AGGAGCATATTAACACAACATCAATC 58.066 34.615 0.00 0.00 0.00 2.67
2363 13059 7.776969 AGGAGCATATTAACACAACATCAATCT 59.223 33.333 0.00 0.00 0.00 2.40
2364 13060 9.056005 GGAGCATATTAACACAACATCAATCTA 57.944 33.333 0.00 0.00 0.00 1.98
2366 13062 9.060347 AGCATATTAACACAACATCAATCTAGG 57.940 33.333 0.00 0.00 0.00 3.02
2367 13063 8.840321 GCATATTAACACAACATCAATCTAGGT 58.160 33.333 0.00 0.00 0.00 3.08
2375 13071 8.840321 ACACAACATCAATCTAGGTTATATTGC 58.160 33.333 0.00 0.00 31.98 3.56
2376 13072 8.839343 CACAACATCAATCTAGGTTATATTGCA 58.161 33.333 0.00 0.00 31.98 4.08
2377 13073 9.578576 ACAACATCAATCTAGGTTATATTGCAT 57.421 29.630 0.00 0.00 31.98 3.96
2380 13076 9.578576 ACATCAATCTAGGTTATATTGCATTGT 57.421 29.630 0.00 0.00 31.98 2.71
2383 13079 9.625747 TCAATCTAGGTTATATTGCATTGTTCA 57.374 29.630 0.00 0.00 31.98 3.18
2389 13085 8.721019 AGGTTATATTGCATTGTTCAAAATGG 57.279 30.769 0.00 0.00 37.89 3.16
2390 13086 8.538701 AGGTTATATTGCATTGTTCAAAATGGA 58.461 29.630 0.00 0.00 37.89 3.41
2391 13087 9.328845 GGTTATATTGCATTGTTCAAAATGGAT 57.671 29.630 0.00 0.00 37.66 3.41
2393 13089 5.554822 ATTGCATTGTTCAAAATGGATGC 57.445 34.783 0.00 0.00 37.66 3.91
2394 13090 4.004196 TGCATTGTTCAAAATGGATGCA 57.996 36.364 4.85 4.85 45.15 3.96
2395 13091 4.386711 TGCATTGTTCAAAATGGATGCAA 58.613 34.783 6.37 0.00 44.60 4.08
2396 13092 5.004448 TGCATTGTTCAAAATGGATGCAAT 58.996 33.333 6.37 0.00 44.60 3.56
2397 13093 6.171213 TGCATTGTTCAAAATGGATGCAATA 58.829 32.000 6.37 0.00 44.60 1.90
2398 13094 6.824196 TGCATTGTTCAAAATGGATGCAATAT 59.176 30.769 6.37 0.00 44.60 1.28
2399 13095 7.129622 GCATTGTTCAAAATGGATGCAATATG 58.870 34.615 0.00 0.00 39.58 1.78
2400 13096 7.201661 GCATTGTTCAAAATGGATGCAATATGT 60.202 33.333 0.00 0.00 39.58 2.29
2401 13097 7.830940 TTGTTCAAAATGGATGCAATATGTC 57.169 32.000 0.00 0.00 0.00 3.06
2402 13098 7.172868 TGTTCAAAATGGATGCAATATGTCT 57.827 32.000 0.00 0.00 0.00 3.41
2403 13099 7.036829 TGTTCAAAATGGATGCAATATGTCTG 58.963 34.615 0.00 0.00 0.00 3.51
2404 13100 5.593968 TCAAAATGGATGCAATATGTCTGC 58.406 37.500 0.00 0.00 40.35 4.26
2411 13107 1.473677 TGCAATATGTCTGCAACCAGC 59.526 47.619 0.00 0.00 46.47 4.85
2412 13108 4.079434 TGCAATATGTCTGCAACCAGCG 62.079 50.000 0.00 0.00 46.47 5.18
2430 13126 4.119363 GCTGCAGGGGATGGCTGA 62.119 66.667 17.12 0.00 0.00 4.26
2431 13127 2.124403 CTGCAGGGGATGGCTGAC 60.124 66.667 5.57 0.00 0.00 3.51
2432 13128 4.100084 TGCAGGGGATGGCTGACG 62.100 66.667 0.00 0.00 0.00 4.35
2433 13129 3.785859 GCAGGGGATGGCTGACGA 61.786 66.667 0.00 0.00 0.00 4.20
2434 13130 3.112205 GCAGGGGATGGCTGACGAT 62.112 63.158 0.00 0.00 0.00 3.73
2435 13131 1.528824 CAGGGGATGGCTGACGATT 59.471 57.895 0.00 0.00 0.00 3.34
2436 13132 0.758734 CAGGGGATGGCTGACGATTA 59.241 55.000 0.00 0.00 0.00 1.75
2437 13133 1.140852 CAGGGGATGGCTGACGATTAA 59.859 52.381 0.00 0.00 0.00 1.40
2438 13134 1.843851 AGGGGATGGCTGACGATTAAA 59.156 47.619 0.00 0.00 0.00 1.52
2439 13135 2.158755 AGGGGATGGCTGACGATTAAAG 60.159 50.000 0.00 0.00 0.00 1.85
2440 13136 2.158813 GGGGATGGCTGACGATTAAAGA 60.159 50.000 0.00 0.00 0.00 2.52
2441 13137 2.872858 GGGATGGCTGACGATTAAAGAC 59.127 50.000 0.00 0.00 0.00 3.01
2442 13138 2.872858 GGATGGCTGACGATTAAAGACC 59.127 50.000 0.00 0.00 0.00 3.85
2443 13139 2.396590 TGGCTGACGATTAAAGACCC 57.603 50.000 0.00 0.00 0.00 4.46
2444 13140 1.287425 GGCTGACGATTAAAGACCCG 58.713 55.000 0.00 0.00 0.00 5.28
2445 13141 1.405121 GGCTGACGATTAAAGACCCGT 60.405 52.381 0.00 0.00 38.01 5.28
2448 13144 1.553308 GACGATTAAAGACCCGTCGG 58.447 55.000 3.60 3.60 41.22 4.79
2450 13146 1.273327 ACGATTAAAGACCCGTCGGTT 59.727 47.619 11.06 0.00 44.88 4.44
2451 13147 2.289010 ACGATTAAAGACCCGTCGGTTT 60.289 45.455 11.06 7.04 44.88 3.27
2452 13148 2.738314 CGATTAAAGACCCGTCGGTTTT 59.262 45.455 11.06 10.17 44.88 2.43
2453 13149 3.423907 CGATTAAAGACCCGTCGGTTTTG 60.424 47.826 11.06 0.00 44.88 2.44
2454 13150 2.618442 TAAAGACCCGTCGGTTTTGT 57.382 45.000 11.06 0.00 44.88 2.83
2455 13151 1.753930 AAAGACCCGTCGGTTTTGTT 58.246 45.000 11.06 0.00 44.88 2.83
2456 13152 1.753930 AAGACCCGTCGGTTTTGTTT 58.246 45.000 11.06 0.00 44.88 2.83
2457 13153 1.018910 AGACCCGTCGGTTTTGTTTG 58.981 50.000 11.06 0.00 44.88 2.93
2458 13154 0.593008 GACCCGTCGGTTTTGTTTGC 60.593 55.000 11.06 0.00 44.88 3.68
2459 13155 1.033202 ACCCGTCGGTTTTGTTTGCT 61.033 50.000 11.06 0.00 40.58 3.91
2460 13156 0.945813 CCCGTCGGTTTTGTTTGCTA 59.054 50.000 11.06 0.00 0.00 3.49
2461 13157 1.334329 CCCGTCGGTTTTGTTTGCTAC 60.334 52.381 11.06 0.00 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
106 115 2.844839 CGGTGGGGGAGGAGGATC 60.845 72.222 0.00 0.00 0.00 3.36
171 180 4.274069 CATCCAACAATCTAATCAACGCG 58.726 43.478 3.53 3.53 0.00 6.01
185 194 4.465632 AACTGATACTACGCATCCAACA 57.534 40.909 0.00 0.00 0.00 3.33
202 216 2.662006 TCAGATCGGAGCAGAAACTG 57.338 50.000 0.00 0.00 33.38 3.16
203 217 2.741228 GCATCAGATCGGAGCAGAAACT 60.741 50.000 1.20 0.00 0.00 2.66
264 291 1.359459 CCAAAGCTTCGCCGTCCTAC 61.359 60.000 0.00 0.00 0.00 3.18
269 296 4.980805 TCGCCAAAGCTTCGCCGT 62.981 61.111 0.00 0.00 36.60 5.68
315 346 3.377253 ACACGAACAGATCTACCCCTA 57.623 47.619 0.00 0.00 0.00 3.53
346 377 3.285484 TGAGACTATACGGGTCAAGGAC 58.715 50.000 0.00 0.00 36.29 3.85
388 419 0.820226 TCACTGAGGAGCGGATGAAG 59.180 55.000 0.00 0.00 0.00 3.02
392 423 2.666272 TCTATCACTGAGGAGCGGAT 57.334 50.000 0.00 0.00 0.00 4.18
448 481 6.795399 ACACAAAAGGCTAATAATGGATTCG 58.205 36.000 0.00 0.00 0.00 3.34
450 483 6.377146 ACGACACAAAAGGCTAATAATGGATT 59.623 34.615 0.00 0.00 0.00 3.01
451 484 5.885912 ACGACACAAAAGGCTAATAATGGAT 59.114 36.000 0.00 0.00 0.00 3.41
452 485 5.250200 ACGACACAAAAGGCTAATAATGGA 58.750 37.500 0.00 0.00 0.00 3.41
453 486 5.560966 ACGACACAAAAGGCTAATAATGG 57.439 39.130 0.00 0.00 0.00 3.16
454 487 7.303634 ACTACGACACAAAAGGCTAATAATG 57.696 36.000 0.00 0.00 0.00 1.90
455 488 7.822822 AGAACTACGACACAAAAGGCTAATAAT 59.177 33.333 0.00 0.00 0.00 1.28
456 489 7.156673 AGAACTACGACACAAAAGGCTAATAA 58.843 34.615 0.00 0.00 0.00 1.40
457 490 6.694447 AGAACTACGACACAAAAGGCTAATA 58.306 36.000 0.00 0.00 0.00 0.98
458 491 5.548406 AGAACTACGACACAAAAGGCTAAT 58.452 37.500 0.00 0.00 0.00 1.73
459 492 4.952460 AGAACTACGACACAAAAGGCTAA 58.048 39.130 0.00 0.00 0.00 3.09
460 493 4.595762 AGAACTACGACACAAAAGGCTA 57.404 40.909 0.00 0.00 0.00 3.93
461 494 3.470645 AGAACTACGACACAAAAGGCT 57.529 42.857 0.00 0.00 0.00 4.58
462 495 4.272748 AGAAAGAACTACGACACAAAAGGC 59.727 41.667 0.00 0.00 0.00 4.35
463 496 5.753921 AGAGAAAGAACTACGACACAAAAGG 59.246 40.000 0.00 0.00 0.00 3.11
464 497 6.074249 GGAGAGAAAGAACTACGACACAAAAG 60.074 42.308 0.00 0.00 0.00 2.27
465 498 5.751990 GGAGAGAAAGAACTACGACACAAAA 59.248 40.000 0.00 0.00 0.00 2.44
477 510 1.715993 GCGTCTGGGAGAGAAAGAAC 58.284 55.000 0.00 0.00 30.26 3.01
482 515 1.945394 GTATACGCGTCTGGGAGAGAA 59.055 52.381 18.63 0.00 30.26 2.87
487 520 1.731433 GGCAGTATACGCGTCTGGGA 61.731 60.000 18.63 0.00 0.00 4.37
488 521 1.299926 GGCAGTATACGCGTCTGGG 60.300 63.158 18.63 4.01 0.00 4.45
489 522 0.595053 CAGGCAGTATACGCGTCTGG 60.595 60.000 18.63 3.18 0.00 3.86
597 1040 4.019174 ACATGCTTAACATCCAAGGAAGG 58.981 43.478 0.00 0.00 36.64 3.46
600 1043 5.692115 TCTACATGCTTAACATCCAAGGA 57.308 39.130 0.00 0.00 36.64 3.36
601 1044 6.543465 TCAATCTACATGCTTAACATCCAAGG 59.457 38.462 0.00 0.00 36.64 3.61
602 1045 7.558161 TCAATCTACATGCTTAACATCCAAG 57.442 36.000 0.00 0.00 36.64 3.61
604 1047 8.523915 AAATCAATCTACATGCTTAACATCCA 57.476 30.769 0.00 0.00 36.64 3.41
606 1049 8.078596 GGGAAATCAATCTACATGCTTAACATC 58.921 37.037 0.00 0.00 36.64 3.06
608 1051 6.321181 GGGGAAATCAATCTACATGCTTAACA 59.679 38.462 0.00 0.00 0.00 2.41
609 1052 6.547510 AGGGGAAATCAATCTACATGCTTAAC 59.452 38.462 0.00 0.00 0.00 2.01
611 1054 6.064060 CAGGGGAAATCAATCTACATGCTTA 58.936 40.000 0.00 0.00 0.00 3.09
612 1055 4.891756 CAGGGGAAATCAATCTACATGCTT 59.108 41.667 0.00 0.00 0.00 3.91
613 1056 4.166725 TCAGGGGAAATCAATCTACATGCT 59.833 41.667 0.00 0.00 0.00 3.79
614 1057 4.464008 TCAGGGGAAATCAATCTACATGC 58.536 43.478 0.00 0.00 0.00 4.06
625 1068 3.948473 GCCTAACTTTCTCAGGGGAAATC 59.052 47.826 0.00 0.00 35.12 2.17
626 1069 3.593780 AGCCTAACTTTCTCAGGGGAAAT 59.406 43.478 0.00 0.00 35.12 2.17
628 1071 2.632537 AGCCTAACTTTCTCAGGGGAA 58.367 47.619 0.00 0.00 0.00 3.97
631 1074 2.356227 GGGAAGCCTAACTTTCTCAGGG 60.356 54.545 0.00 0.00 39.29 4.45
632 1075 2.573915 AGGGAAGCCTAACTTTCTCAGG 59.426 50.000 0.00 0.00 39.29 3.86
633 1076 3.990959 AGGGAAGCCTAACTTTCTCAG 57.009 47.619 0.00 0.00 39.29 3.35
636 1079 3.261083 AGGAAGGGAAGCCTAACTTTCT 58.739 45.455 0.00 0.00 39.29 2.52
638 1081 3.500471 CCAAGGAAGGGAAGCCTAACTTT 60.500 47.826 0.00 0.00 39.29 2.66
639 1082 2.041755 CCAAGGAAGGGAAGCCTAACTT 59.958 50.000 0.00 0.00 42.98 2.66
640 1083 1.636003 CCAAGGAAGGGAAGCCTAACT 59.364 52.381 0.00 0.00 33.20 2.24
642 1085 2.053747 TCCAAGGAAGGGAAGCCTAA 57.946 50.000 0.00 0.00 33.20 2.69
644 1087 0.627986 CATCCAAGGAAGGGAAGCCT 59.372 55.000 0.00 0.00 38.09 4.58
645 1088 0.332972 ACATCCAAGGAAGGGAAGCC 59.667 55.000 0.00 0.00 38.09 4.35
647 1090 3.696548 GCTTAACATCCAAGGAAGGGAAG 59.303 47.826 0.00 0.00 38.09 3.46
649 1092 2.647299 TGCTTAACATCCAAGGAAGGGA 59.353 45.455 0.00 0.00 39.14 4.20
664 1115 0.539518 TAGCTGCCGGACATGCTTAA 59.460 50.000 5.05 0.00 35.35 1.85
778 1299 6.715280 TCTGAGAAAAAGCCATCTACAGATT 58.285 36.000 0.00 0.00 31.25 2.40
791 1998 6.141560 AGTCTGGCTTTTTCTGAGAAAAAG 57.858 37.500 37.43 37.43 45.29 2.27
800 2008 3.139211 AGGGAAGAAGTCTGGCTTTTTCT 59.861 43.478 20.28 1.16 43.68 2.52
809 2017 6.928492 GCTTATCATCTAAGGGAAGAAGTCTG 59.072 42.308 0.00 0.00 0.00 3.51
812 2020 6.814954 TGCTTATCATCTAAGGGAAGAAGT 57.185 37.500 0.00 0.00 0.00 3.01
949 2259 2.502295 AGCCTCAAGAAGCAAACTGAG 58.498 47.619 0.00 0.00 0.00 3.35
1104 2476 2.938798 TGCTGGTCCGGGGGAATT 60.939 61.111 0.00 0.00 31.38 2.17
1481 12090 1.380302 GGAGCACCATGTGAAGGGT 59.620 57.895 0.00 0.00 35.23 4.34
1483 12092 1.003355 ACGGAGCACCATGTGAAGG 60.003 57.895 0.00 0.00 35.23 3.46
1484 12093 0.036952 AGACGGAGCACCATGTGAAG 60.037 55.000 0.00 0.00 35.23 3.02
1485 12094 0.037326 GAGACGGAGCACCATGTGAA 60.037 55.000 0.00 0.00 35.23 3.18
1487 12096 1.448540 GGAGACGGAGCACCATGTG 60.449 63.158 0.00 0.00 36.51 3.21
1488 12097 2.982130 GGAGACGGAGCACCATGT 59.018 61.111 0.00 0.00 35.59 3.21
1500 12109 2.030562 CCACCACACCACGGAGAC 59.969 66.667 0.00 0.00 0.00 3.36
1501 12110 2.445085 ACCACCACACCACGGAGA 60.445 61.111 0.00 0.00 0.00 3.71
1503 12112 3.552384 GGACCACCACACCACGGA 61.552 66.667 0.00 0.00 35.97 4.69
1504 12113 4.980805 CGGACCACCACACCACGG 62.981 72.222 0.00 0.00 35.59 4.94
1505 12114 2.366480 TTACGGACCACCACACCACG 62.366 60.000 0.00 0.00 35.59 4.94
1507 12116 0.766131 AATTACGGACCACCACACCA 59.234 50.000 0.00 0.00 35.59 4.17
1509 12118 0.519961 GCAATTACGGACCACCACAC 59.480 55.000 0.00 0.00 35.59 3.82
1510 12119 0.606944 GGCAATTACGGACCACCACA 60.607 55.000 0.00 0.00 35.59 4.17
1511 12120 1.310216 GGGCAATTACGGACCACCAC 61.310 60.000 0.00 0.00 35.59 4.16
1512 12121 1.001887 GGGCAATTACGGACCACCA 60.002 57.895 0.00 0.00 35.59 4.17
1513 12122 1.029947 CAGGGCAATTACGGACCACC 61.030 60.000 0.00 0.00 35.15 4.61
1514 12123 1.029947 CCAGGGCAATTACGGACCAC 61.030 60.000 0.00 0.00 35.15 4.16
1515 12124 1.301623 CCAGGGCAATTACGGACCA 59.698 57.895 0.00 0.00 35.15 4.02
1516 12125 2.119029 GCCAGGGCAATTACGGACC 61.119 63.158 5.20 0.00 41.49 4.46
1517 12126 2.469516 CGCCAGGGCAATTACGGAC 61.470 63.158 11.42 0.00 42.06 4.79
1518 12127 2.124901 CGCCAGGGCAATTACGGA 60.125 61.111 11.42 0.00 42.06 4.69
1519 12128 2.437716 ACGCCAGGGCAATTACGG 60.438 61.111 11.42 0.00 42.06 4.02
1520 12129 2.469516 GGACGCCAGGGCAATTACG 61.470 63.158 11.42 0.00 42.06 3.18
1521 12130 1.077716 AGGACGCCAGGGCAATTAC 60.078 57.895 11.42 0.00 42.06 1.89
1522 12131 1.077787 CAGGACGCCAGGGCAATTA 60.078 57.895 11.42 0.00 42.06 1.40
1523 12132 2.361610 CAGGACGCCAGGGCAATT 60.362 61.111 11.42 0.00 42.06 2.32
1524 12133 3.628646 GACAGGACGCCAGGGCAAT 62.629 63.158 11.42 0.00 42.06 3.56
1525 12134 4.329545 GACAGGACGCCAGGGCAA 62.330 66.667 11.42 0.00 42.06 4.52
1528 12137 3.934391 GAACGACAGGACGCCAGGG 62.934 68.421 0.00 0.00 36.70 4.45
1529 12138 2.432628 GAACGACAGGACGCCAGG 60.433 66.667 0.00 0.00 36.70 4.45
1530 12139 0.670546 AATGAACGACAGGACGCCAG 60.671 55.000 0.00 0.00 36.70 4.85
1534 12143 3.169207 GTTCAAATGAACGACAGGACG 57.831 47.619 10.26 0.00 43.97 4.79
1579 12188 6.021596 CGATAGTTCATTAAACCAACACAGC 58.978 40.000 0.00 0.00 38.76 4.40
1656 12292 7.290857 TCTGAAGTTCACTTATTCATTACGC 57.709 36.000 0.08 0.00 36.11 4.42
1700 12338 5.345741 GCACAATATACAAAACCAACAGCAG 59.654 40.000 0.00 0.00 0.00 4.24
1737 12375 5.105917 GGAATTCATAAAGGGCACGAGAAAA 60.106 40.000 7.93 0.00 0.00 2.29
1740 12378 3.199946 AGGAATTCATAAAGGGCACGAGA 59.800 43.478 7.93 0.00 0.00 4.04
1745 12411 6.642430 CAATTCAAGGAATTCATAAAGGGCA 58.358 36.000 7.93 0.00 39.82 5.36
1747 12413 6.881570 AGCAATTCAAGGAATTCATAAAGGG 58.118 36.000 7.93 0.00 39.82 3.95
1751 12417 6.938507 AGCAAGCAATTCAAGGAATTCATAA 58.061 32.000 7.93 0.00 39.82 1.90
1757 12423 4.877378 TCAAGCAAGCAATTCAAGGAAT 57.123 36.364 0.00 0.00 33.25 3.01
1774 12449 8.993121 AGAAGATAAACGCCACAATATATCAAG 58.007 33.333 0.00 0.00 0.00 3.02
1777 12452 7.095229 TGCAGAAGATAAACGCCACAATATATC 60.095 37.037 0.00 0.00 0.00 1.63
1790 12465 9.771534 AATTAGGATCTAGTGCAGAAGATAAAC 57.228 33.333 10.05 5.31 36.67 2.01
1793 12468 9.373450 AGAAATTAGGATCTAGTGCAGAAGATA 57.627 33.333 10.05 0.00 36.67 1.98
1794 12469 8.261349 AGAAATTAGGATCTAGTGCAGAAGAT 57.739 34.615 9.88 9.88 36.67 2.40
1795 12470 7.343057 TGAGAAATTAGGATCTAGTGCAGAAGA 59.657 37.037 0.63 0.63 36.67 2.87
1802 12484 7.925483 CAGAACCTGAGAAATTAGGATCTAGTG 59.075 40.741 4.87 0.00 42.29 2.74
1826 12508 4.439700 GCATCACCCAAATCTGAACATCAG 60.440 45.833 0.88 0.88 45.59 2.90
1827 12509 3.444742 GCATCACCCAAATCTGAACATCA 59.555 43.478 0.00 0.00 0.00 3.07
1828 12510 3.444742 TGCATCACCCAAATCTGAACATC 59.555 43.478 0.00 0.00 0.00 3.06
1843 12536 6.699575 ACTTGGGAGTATAAAATGCATCAC 57.300 37.500 0.00 0.00 33.32 3.06
1851 12544 7.767198 CGTCCAGAAATACTTGGGAGTATAAAA 59.233 37.037 0.00 0.00 45.99 1.52
1856 12549 3.449737 CCGTCCAGAAATACTTGGGAGTA 59.550 47.826 0.00 0.00 42.30 2.59
1857 12550 2.236395 CCGTCCAGAAATACTTGGGAGT 59.764 50.000 0.00 0.00 39.97 3.85
1858 12551 2.500098 TCCGTCCAGAAATACTTGGGAG 59.500 50.000 0.00 0.00 0.00 4.30
1859 12552 2.500098 CTCCGTCCAGAAATACTTGGGA 59.500 50.000 0.00 0.00 0.00 4.37
1860 12553 2.420129 CCTCCGTCCAGAAATACTTGGG 60.420 54.545 0.00 0.00 0.00 4.12
1861 12554 2.420129 CCCTCCGTCCAGAAATACTTGG 60.420 54.545 0.00 0.00 0.00 3.61
1863 12556 2.766828 CTCCCTCCGTCCAGAAATACTT 59.233 50.000 0.00 0.00 0.00 2.24
1865 12558 2.108970 ACTCCCTCCGTCCAGAAATAC 58.891 52.381 0.00 0.00 0.00 1.89
1866 12559 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
1867 12560 2.108970 GTACTCCCTCCGTCCAGAAAT 58.891 52.381 0.00 0.00 0.00 2.17
1868 12561 1.076677 AGTACTCCCTCCGTCCAGAAA 59.923 52.381 0.00 0.00 0.00 2.52
1869 12562 0.702902 AGTACTCCCTCCGTCCAGAA 59.297 55.000 0.00 0.00 0.00 3.02
1870 12563 0.702902 AAGTACTCCCTCCGTCCAGA 59.297 55.000 0.00 0.00 0.00 3.86
1871 12564 1.104630 GAAGTACTCCCTCCGTCCAG 58.895 60.000 0.00 0.00 0.00 3.86
1872 12565 0.702902 AGAAGTACTCCCTCCGTCCA 59.297 55.000 0.00 0.00 0.00 4.02
1873 12566 1.391577 GAGAAGTACTCCCTCCGTCC 58.608 60.000 12.00 0.00 39.53 4.79
1874 12567 1.015868 CGAGAAGTACTCCCTCCGTC 58.984 60.000 15.50 1.08 42.18 4.79
1875 12568 0.327591 ACGAGAAGTACTCCCTCCGT 59.672 55.000 15.50 13.78 42.18 4.69
1876 12569 0.733729 CACGAGAAGTACTCCCTCCG 59.266 60.000 15.50 13.35 42.18 4.63
1877 12570 1.104630 CCACGAGAAGTACTCCCTCC 58.895 60.000 15.50 3.61 42.18 4.30
1878 12571 2.125773 TCCACGAGAAGTACTCCCTC 57.874 55.000 12.70 12.70 42.18 4.30
1879 12572 2.657143 GATCCACGAGAAGTACTCCCT 58.343 52.381 0.00 0.00 42.18 4.20
1880 12573 1.682323 GGATCCACGAGAAGTACTCCC 59.318 57.143 6.95 0.00 42.18 4.30
1881 12574 2.359531 CAGGATCCACGAGAAGTACTCC 59.640 54.545 15.82 0.00 42.18 3.85
1882 12575 2.223618 GCAGGATCCACGAGAAGTACTC 60.224 54.545 15.82 0.00 41.79 2.59
1883 12576 1.751924 GCAGGATCCACGAGAAGTACT 59.248 52.381 15.82 0.00 0.00 2.73
1884 12577 1.751924 AGCAGGATCCACGAGAAGTAC 59.248 52.381 15.82 0.00 0.00 2.73
1885 12578 1.751351 CAGCAGGATCCACGAGAAGTA 59.249 52.381 15.82 0.00 0.00 2.24
1886 12579 0.534412 CAGCAGGATCCACGAGAAGT 59.466 55.000 15.82 0.00 0.00 3.01
1887 12580 0.809241 GCAGCAGGATCCACGAGAAG 60.809 60.000 15.82 0.00 0.00 2.85
1888 12581 1.219124 GCAGCAGGATCCACGAGAA 59.781 57.895 15.82 0.00 0.00 2.87
1892 12585 0.463295 AATCAGCAGCAGGATCCACG 60.463 55.000 15.82 5.60 0.00 4.94
1921 12614 4.826183 GCATTATTCAGCTCCAGAAGGATT 59.174 41.667 0.00 0.00 44.70 3.01
1952 12645 6.946340 TCAGCTCCAGAAATAACATACAAGA 58.054 36.000 0.00 0.00 0.00 3.02
1954 12647 9.679661 TTATTCAGCTCCAGAAATAACATACAA 57.320 29.630 0.00 0.00 0.00 2.41
1955 12648 9.851686 ATTATTCAGCTCCAGAAATAACATACA 57.148 29.630 0.00 0.00 0.00 2.29
1976 12669 9.950680 CAACGCATAGTCCAGAATAAAATTATT 57.049 29.630 0.00 0.00 36.14 1.40
1977 12670 9.120538 ACAACGCATAGTCCAGAATAAAATTAT 57.879 29.630 0.00 0.00 0.00 1.28
1978 12671 8.500753 ACAACGCATAGTCCAGAATAAAATTA 57.499 30.769 0.00 0.00 0.00 1.40
1979 12672 7.391148 ACAACGCATAGTCCAGAATAAAATT 57.609 32.000 0.00 0.00 0.00 1.82
1980 12673 7.094377 ACAACAACGCATAGTCCAGAATAAAAT 60.094 33.333 0.00 0.00 0.00 1.82
1981 12674 6.205853 ACAACAACGCATAGTCCAGAATAAAA 59.794 34.615 0.00 0.00 0.00 1.52
1982 12675 5.703592 ACAACAACGCATAGTCCAGAATAAA 59.296 36.000 0.00 0.00 0.00 1.40
1983 12676 5.121611 CACAACAACGCATAGTCCAGAATAA 59.878 40.000 0.00 0.00 0.00 1.40
1985 12678 3.436704 CACAACAACGCATAGTCCAGAAT 59.563 43.478 0.00 0.00 0.00 2.40
1986 12679 2.805671 CACAACAACGCATAGTCCAGAA 59.194 45.455 0.00 0.00 0.00 3.02
1987 12680 2.224185 ACACAACAACGCATAGTCCAGA 60.224 45.455 0.00 0.00 0.00 3.86
1991 12684 3.247648 ACAAGACACAACAACGCATAGTC 59.752 43.478 0.00 0.00 0.00 2.59
1992 12685 3.002246 CACAAGACACAACAACGCATAGT 59.998 43.478 0.00 0.00 0.00 2.12
1993 12686 3.002246 ACACAAGACACAACAACGCATAG 59.998 43.478 0.00 0.00 0.00 2.23
1994 12687 2.939756 ACACAAGACACAACAACGCATA 59.060 40.909 0.00 0.00 0.00 3.14
1995 12688 1.742831 ACACAAGACACAACAACGCAT 59.257 42.857 0.00 0.00 0.00 4.73
1996 12689 1.135831 CACACAAGACACAACAACGCA 60.136 47.619 0.00 0.00 0.00 5.24
1997 12690 1.129624 TCACACAAGACACAACAACGC 59.870 47.619 0.00 0.00 0.00 4.84
1998 12691 2.158645 TGTCACACAAGACACAACAACG 59.841 45.455 0.00 0.00 43.18 4.10
1999 12692 3.426159 CCTGTCACACAAGACACAACAAC 60.426 47.826 0.00 0.00 43.18 3.32
2000 12693 2.746904 CCTGTCACACAAGACACAACAA 59.253 45.455 0.00 0.00 43.18 2.83
2001 12694 2.290008 ACCTGTCACACAAGACACAACA 60.290 45.455 0.00 0.00 43.18 3.33
2002 12695 2.356135 ACCTGTCACACAAGACACAAC 58.644 47.619 0.00 0.00 43.18 3.32
2003 12696 2.779755 ACCTGTCACACAAGACACAA 57.220 45.000 0.00 0.00 43.18 3.33
2004 12697 2.746904 CAAACCTGTCACACAAGACACA 59.253 45.455 0.00 0.00 43.18 3.72
2005 12698 2.747446 ACAAACCTGTCACACAAGACAC 59.253 45.455 0.00 0.00 43.18 3.67
2006 12699 3.066291 ACAAACCTGTCACACAAGACA 57.934 42.857 0.00 0.00 45.64 3.41
2007 12700 5.751243 ATTACAAACCTGTCACACAAGAC 57.249 39.130 0.00 0.00 36.96 3.01
2008 12701 6.119536 AGAATTACAAACCTGTCACACAAGA 58.880 36.000 0.00 0.00 36.96 3.02
2009 12702 6.377327 AGAATTACAAACCTGTCACACAAG 57.623 37.500 0.00 0.00 36.96 3.16
2013 12706 4.699637 ACGAGAATTACAAACCTGTCACA 58.300 39.130 0.00 0.00 36.96 3.58
2019 12712 4.969484 ACTGGAACGAGAATTACAAACCT 58.031 39.130 0.00 0.00 0.00 3.50
2059 12755 8.833231 AATGCCACTATATCACACTATAACAC 57.167 34.615 0.00 0.00 0.00 3.32
2060 12756 9.845740 AAAATGCCACTATATCACACTATAACA 57.154 29.630 0.00 0.00 0.00 2.41
2064 12760 9.060347 CAGAAAAATGCCACTATATCACACTAT 57.940 33.333 0.00 0.00 0.00 2.12
2065 12761 7.498900 CCAGAAAAATGCCACTATATCACACTA 59.501 37.037 0.00 0.00 0.00 2.74
2066 12762 6.319658 CCAGAAAAATGCCACTATATCACACT 59.680 38.462 0.00 0.00 0.00 3.55
2067 12763 6.460123 CCCAGAAAAATGCCACTATATCACAC 60.460 42.308 0.00 0.00 0.00 3.82
2068 12764 5.593909 CCCAGAAAAATGCCACTATATCACA 59.406 40.000 0.00 0.00 0.00 3.58
2069 12765 5.594317 ACCCAGAAAAATGCCACTATATCAC 59.406 40.000 0.00 0.00 0.00 3.06
2070 12766 5.593909 CACCCAGAAAAATGCCACTATATCA 59.406 40.000 0.00 0.00 0.00 2.15
2071 12767 5.507985 GCACCCAGAAAAATGCCACTATATC 60.508 44.000 0.00 0.00 31.71 1.63
2072 12768 4.342092 GCACCCAGAAAAATGCCACTATAT 59.658 41.667 0.00 0.00 31.71 0.86
2073 12769 3.699038 GCACCCAGAAAAATGCCACTATA 59.301 43.478 0.00 0.00 31.71 1.31
2074 12770 2.497273 GCACCCAGAAAAATGCCACTAT 59.503 45.455 0.00 0.00 31.71 2.12
2075 12771 1.892474 GCACCCAGAAAAATGCCACTA 59.108 47.619 0.00 0.00 31.71 2.74
2076 12772 0.681175 GCACCCAGAAAAATGCCACT 59.319 50.000 0.00 0.00 31.71 4.00
2077 12773 0.681175 AGCACCCAGAAAAATGCCAC 59.319 50.000 0.00 0.00 38.92 5.01
2078 12774 1.422531 AAGCACCCAGAAAAATGCCA 58.577 45.000 0.00 0.00 38.92 4.92
2079 12775 3.893326 ATAAGCACCCAGAAAAATGCC 57.107 42.857 0.00 0.00 38.92 4.40
2080 12776 4.568956 ACAATAAGCACCCAGAAAAATGC 58.431 39.130 0.00 0.00 38.39 3.56
2081 12777 7.546358 TGATACAATAAGCACCCAGAAAAATG 58.454 34.615 0.00 0.00 0.00 2.32
2082 12778 7.716799 TGATACAATAAGCACCCAGAAAAAT 57.283 32.000 0.00 0.00 0.00 1.82
2083 12779 7.014711 TGTTGATACAATAAGCACCCAGAAAAA 59.985 33.333 0.00 0.00 0.00 1.94
2084 12780 6.491745 TGTTGATACAATAAGCACCCAGAAAA 59.508 34.615 0.00 0.00 0.00 2.29
2085 12781 6.007076 TGTTGATACAATAAGCACCCAGAAA 58.993 36.000 0.00 0.00 0.00 2.52
2086 12782 5.565509 TGTTGATACAATAAGCACCCAGAA 58.434 37.500 0.00 0.00 0.00 3.02
2087 12783 5.172687 TGTTGATACAATAAGCACCCAGA 57.827 39.130 0.00 0.00 0.00 3.86
2088 12784 6.267817 CAATGTTGATACAATAAGCACCCAG 58.732 40.000 0.00 0.00 37.91 4.45
2089 12785 5.394005 GCAATGTTGATACAATAAGCACCCA 60.394 40.000 0.00 0.00 37.91 4.51
2090 12786 5.043248 GCAATGTTGATACAATAAGCACCC 58.957 41.667 0.00 0.00 37.91 4.61
2091 12787 5.649557 TGCAATGTTGATACAATAAGCACC 58.350 37.500 0.00 0.00 37.91 5.01
2092 12788 7.760131 AATGCAATGTTGATACAATAAGCAC 57.240 32.000 0.00 0.00 37.91 4.40
2093 12789 7.818446 ACAAATGCAATGTTGATACAATAAGCA 59.182 29.630 13.30 11.38 37.91 3.91
2094 12790 8.111836 CACAAATGCAATGTTGATACAATAAGC 58.888 33.333 13.30 0.00 37.91 3.09
2095 12791 9.356433 TCACAAATGCAATGTTGATACAATAAG 57.644 29.630 13.30 0.00 37.91 1.73
2096 12792 9.356433 CTCACAAATGCAATGTTGATACAATAA 57.644 29.630 13.30 0.00 37.91 1.40
2097 12793 8.738106 TCTCACAAATGCAATGTTGATACAATA 58.262 29.630 13.30 0.00 37.91 1.90
2098 12794 7.604549 TCTCACAAATGCAATGTTGATACAAT 58.395 30.769 13.30 0.00 37.91 2.71
2099 12795 6.979465 TCTCACAAATGCAATGTTGATACAA 58.021 32.000 13.30 0.00 37.91 2.41
2100 12796 6.207221 ACTCTCACAAATGCAATGTTGATACA 59.793 34.615 13.30 0.00 38.95 2.29
2101 12797 6.525628 CACTCTCACAAATGCAATGTTGATAC 59.474 38.462 13.30 0.00 0.00 2.24
2102 12798 6.430616 TCACTCTCACAAATGCAATGTTGATA 59.569 34.615 13.30 5.03 0.00 2.15
2103 12799 5.242171 TCACTCTCACAAATGCAATGTTGAT 59.758 36.000 13.30 0.00 0.00 2.57
2104 12800 4.579753 TCACTCTCACAAATGCAATGTTGA 59.420 37.500 13.30 8.52 0.00 3.18
2105 12801 4.862350 TCACTCTCACAAATGCAATGTTG 58.138 39.130 5.82 6.24 0.00 3.33
2106 12802 4.558095 GCTCACTCTCACAAATGCAATGTT 60.558 41.667 5.82 0.00 0.00 2.71
2107 12803 3.057736 GCTCACTCTCACAAATGCAATGT 60.058 43.478 2.87 2.87 0.00 2.71
2108 12804 3.190744 AGCTCACTCTCACAAATGCAATG 59.809 43.478 0.00 0.00 0.00 2.82
2109 12805 3.418995 AGCTCACTCTCACAAATGCAAT 58.581 40.909 0.00 0.00 0.00 3.56
2110 12806 2.854963 AGCTCACTCTCACAAATGCAA 58.145 42.857 0.00 0.00 0.00 4.08
2111 12807 2.556144 AGCTCACTCTCACAAATGCA 57.444 45.000 0.00 0.00 0.00 3.96
2112 12808 3.072944 AGAAGCTCACTCTCACAAATGC 58.927 45.455 0.00 0.00 0.00 3.56
2113 12809 5.231779 CGATAGAAGCTCACTCTCACAAATG 59.768 44.000 0.00 0.00 39.76 2.32
2114 12810 5.105554 ACGATAGAAGCTCACTCTCACAAAT 60.106 40.000 0.00 0.00 41.38 2.32
2115 12811 4.218635 ACGATAGAAGCTCACTCTCACAAA 59.781 41.667 0.00 0.00 41.38 2.83
2116 12812 3.759086 ACGATAGAAGCTCACTCTCACAA 59.241 43.478 0.00 0.00 41.38 3.33
2117 12813 3.348119 ACGATAGAAGCTCACTCTCACA 58.652 45.455 0.00 0.00 41.38 3.58
2118 12814 5.487153 TTACGATAGAAGCTCACTCTCAC 57.513 43.478 0.00 0.00 41.38 3.51
2119 12815 5.880887 TCTTTACGATAGAAGCTCACTCTCA 59.119 40.000 0.00 0.00 41.38 3.27
2120 12816 6.366315 TCTTTACGATAGAAGCTCACTCTC 57.634 41.667 0.00 0.00 41.38 3.20
2121 12817 6.320164 ACATCTTTACGATAGAAGCTCACTCT 59.680 38.462 0.00 0.00 41.38 3.24
2122 12818 6.500041 ACATCTTTACGATAGAAGCTCACTC 58.500 40.000 0.00 0.00 41.38 3.51
2123 12819 6.095580 TGACATCTTTACGATAGAAGCTCACT 59.904 38.462 0.00 0.00 41.38 3.41
2124 12820 6.266323 TGACATCTTTACGATAGAAGCTCAC 58.734 40.000 0.00 0.00 41.38 3.51
2125 12821 6.451064 TGACATCTTTACGATAGAAGCTCA 57.549 37.500 0.00 0.00 41.38 4.26
2126 12822 6.975772 AGTTGACATCTTTACGATAGAAGCTC 59.024 38.462 0.00 0.00 41.38 4.09
2127 12823 6.868622 AGTTGACATCTTTACGATAGAAGCT 58.131 36.000 0.00 0.00 41.38 3.74
2128 12824 7.489757 AGAAGTTGACATCTTTACGATAGAAGC 59.510 37.037 0.41 0.00 41.38 3.86
2129 12825 8.918961 AGAAGTTGACATCTTTACGATAGAAG 57.081 34.615 0.41 0.00 41.38 2.85
2134 12830 9.197694 GCATATAGAAGTTGACATCTTTACGAT 57.802 33.333 0.41 0.00 0.00 3.73
2135 12831 8.194769 TGCATATAGAAGTTGACATCTTTACGA 58.805 33.333 0.41 0.00 0.00 3.43
2136 12832 8.352752 TGCATATAGAAGTTGACATCTTTACG 57.647 34.615 0.41 0.00 0.00 3.18
2157 12853 8.780249 AGACACGTAAAACTAGTAAATTTGCAT 58.220 29.630 9.04 0.00 0.00 3.96
2158 12854 8.145316 AGACACGTAAAACTAGTAAATTTGCA 57.855 30.769 9.04 0.00 0.00 4.08
2167 12863 9.485206 ACATCAAATTAGACACGTAAAACTAGT 57.515 29.630 0.00 0.00 0.00 2.57
2170 12866 8.832521 TCAACATCAAATTAGACACGTAAAACT 58.167 29.630 0.00 0.00 0.00 2.66
2171 12867 8.996988 TCAACATCAAATTAGACACGTAAAAC 57.003 30.769 0.00 0.00 0.00 2.43
2172 12868 9.605955 CATCAACATCAAATTAGACACGTAAAA 57.394 29.630 0.00 0.00 0.00 1.52
2173 12869 8.994170 TCATCAACATCAAATTAGACACGTAAA 58.006 29.630 0.00 0.00 0.00 2.01
2174 12870 8.541133 TCATCAACATCAAATTAGACACGTAA 57.459 30.769 0.00 0.00 0.00 3.18
2175 12871 8.603181 CATCATCAACATCAAATTAGACACGTA 58.397 33.333 0.00 0.00 0.00 3.57
2176 12872 7.119699 ACATCATCAACATCAAATTAGACACGT 59.880 33.333 0.00 0.00 0.00 4.49
2177 12873 7.466805 ACATCATCAACATCAAATTAGACACG 58.533 34.615 0.00 0.00 0.00 4.49
2246 12942 8.992073 GCACTTCCATTTTGAAATATTTGAAGT 58.008 29.630 16.27 16.27 0.00 3.01
2247 12943 8.991026 TGCACTTCCATTTTGAAATATTTGAAG 58.009 29.630 5.17 11.91 0.00 3.02
2248 12944 8.899427 TGCACTTCCATTTTGAAATATTTGAA 57.101 26.923 5.17 0.00 0.00 2.69
2249 12945 8.899427 TTGCACTTCCATTTTGAAATATTTGA 57.101 26.923 5.17 0.00 0.00 2.69
2250 12946 9.384682 GTTTGCACTTCCATTTTGAAATATTTG 57.615 29.630 5.17 0.00 0.00 2.32
2251 12947 9.118300 TGTTTGCACTTCCATTTTGAAATATTT 57.882 25.926 0.00 0.00 0.00 1.40
2252 12948 8.674263 TGTTTGCACTTCCATTTTGAAATATT 57.326 26.923 0.00 0.00 0.00 1.28
2253 12949 7.388500 CCTGTTTGCACTTCCATTTTGAAATAT 59.612 33.333 0.00 0.00 0.00 1.28
2254 12950 6.705381 CCTGTTTGCACTTCCATTTTGAAATA 59.295 34.615 0.00 0.00 0.00 1.40
2255 12951 5.528320 CCTGTTTGCACTTCCATTTTGAAAT 59.472 36.000 0.00 0.00 0.00 2.17
2256 12952 4.874966 CCTGTTTGCACTTCCATTTTGAAA 59.125 37.500 0.00 0.00 0.00 2.69
2257 12953 4.161189 TCCTGTTTGCACTTCCATTTTGAA 59.839 37.500 0.00 0.00 0.00 2.69
2258 12954 3.703556 TCCTGTTTGCACTTCCATTTTGA 59.296 39.130 0.00 0.00 0.00 2.69
2259 12955 4.057406 TCCTGTTTGCACTTCCATTTTG 57.943 40.909 0.00 0.00 0.00 2.44
2260 12956 4.101430 ACATCCTGTTTGCACTTCCATTTT 59.899 37.500 0.00 0.00 0.00 1.82
2261 12957 3.642848 ACATCCTGTTTGCACTTCCATTT 59.357 39.130 0.00 0.00 0.00 2.32
2262 12958 3.233507 ACATCCTGTTTGCACTTCCATT 58.766 40.909 0.00 0.00 0.00 3.16
2263 12959 2.821969 GACATCCTGTTTGCACTTCCAT 59.178 45.455 0.00 0.00 0.00 3.41
2264 12960 2.229792 GACATCCTGTTTGCACTTCCA 58.770 47.619 0.00 0.00 0.00 3.53
2265 12961 1.541588 GGACATCCTGTTTGCACTTCC 59.458 52.381 0.00 0.00 0.00 3.46
2266 12962 2.508526 AGGACATCCTGTTTGCACTTC 58.491 47.619 0.00 0.00 46.55 3.01
2267 12963 2.664402 AGGACATCCTGTTTGCACTT 57.336 45.000 0.00 0.00 46.55 3.16
2277 12973 7.306039 CCATGTATATGCACGAGGACATCCT 62.306 48.000 0.00 0.00 40.05 3.24
2278 12974 3.660501 TGTATATGCACGAGGACATCC 57.339 47.619 0.00 0.00 0.00 3.51
2279 12975 3.928992 CCATGTATATGCACGAGGACATC 59.071 47.826 0.00 0.00 32.79 3.06
2280 12976 3.578282 TCCATGTATATGCACGAGGACAT 59.422 43.478 0.00 0.00 32.79 3.06
2281 12977 2.962421 TCCATGTATATGCACGAGGACA 59.038 45.455 0.00 0.00 32.79 4.02
2282 12978 3.660501 TCCATGTATATGCACGAGGAC 57.339 47.619 0.00 0.00 32.79 3.85
2283 12979 3.617288 GCATCCATGTATATGCACGAGGA 60.617 47.826 15.98 11.88 46.19 3.71
2284 12980 2.674852 GCATCCATGTATATGCACGAGG 59.325 50.000 15.98 0.00 46.19 4.63
2291 12987 4.093408 GCACCGTAAGCATCCATGTATATG 59.907 45.833 0.00 0.00 0.00 1.78
2292 12988 4.253685 GCACCGTAAGCATCCATGTATAT 58.746 43.478 0.00 0.00 0.00 0.86
2293 12989 3.070302 TGCACCGTAAGCATCCATGTATA 59.930 43.478 0.00 0.00 37.02 1.47
2294 12990 2.158827 TGCACCGTAAGCATCCATGTAT 60.159 45.455 0.00 0.00 37.02 2.29
2295 12991 1.208293 TGCACCGTAAGCATCCATGTA 59.792 47.619 0.00 0.00 37.02 2.29
2296 12992 0.035534 TGCACCGTAAGCATCCATGT 60.036 50.000 0.00 0.00 37.02 3.21
2297 12993 2.779282 TGCACCGTAAGCATCCATG 58.221 52.632 0.00 0.00 37.02 3.66
2304 13000 1.819632 CCTGGGATGCACCGTAAGC 60.820 63.158 0.00 0.00 40.11 3.09
2305 13001 1.819632 GCCTGGGATGCACCGTAAG 60.820 63.158 0.00 0.00 40.11 2.34
2306 13002 2.270850 GCCTGGGATGCACCGTAA 59.729 61.111 0.00 0.00 40.11 3.18
2307 13003 3.006133 TGCCTGGGATGCACCGTA 61.006 61.111 0.00 0.00 40.11 4.02
2312 13008 1.616327 ACTAGGTGCCTGGGATGCA 60.616 57.895 6.55 0.00 36.12 3.96
2313 13009 1.153086 CACTAGGTGCCTGGGATGC 60.153 63.158 6.55 0.00 0.00 3.91
2314 13010 1.528824 CCACTAGGTGCCTGGGATG 59.471 63.158 6.55 0.00 31.34 3.51
2315 13011 1.694169 CCCACTAGGTGCCTGGGAT 60.694 63.158 9.33 0.00 42.21 3.85
2316 13012 2.285368 CCCACTAGGTGCCTGGGA 60.285 66.667 9.33 0.00 42.21 4.37
2317 13013 1.497309 TTTCCCACTAGGTGCCTGGG 61.497 60.000 8.75 8.75 41.03 4.45
2318 13014 0.404040 TTTTCCCACTAGGTGCCTGG 59.596 55.000 0.12 0.00 36.75 4.45
2319 13015 1.614317 CCTTTTCCCACTAGGTGCCTG 60.614 57.143 0.12 0.00 36.75 4.85
2320 13016 0.698818 CCTTTTCCCACTAGGTGCCT 59.301 55.000 0.00 0.00 36.75 4.75
2321 13017 0.696501 TCCTTTTCCCACTAGGTGCC 59.303 55.000 0.00 0.00 36.75 5.01
2322 13018 1.950954 GCTCCTTTTCCCACTAGGTGC 60.951 57.143 0.00 0.00 40.17 5.01
2323 13019 1.351017 TGCTCCTTTTCCCACTAGGTG 59.649 52.381 0.00 0.00 36.75 4.00
2324 13020 1.742308 TGCTCCTTTTCCCACTAGGT 58.258 50.000 0.00 0.00 36.75 3.08
2325 13021 4.713792 ATATGCTCCTTTTCCCACTAGG 57.286 45.455 0.00 0.00 0.00 3.02
2326 13022 7.012421 GTGTTAATATGCTCCTTTTCCCACTAG 59.988 40.741 0.00 0.00 0.00 2.57
2327 13023 6.826741 GTGTTAATATGCTCCTTTTCCCACTA 59.173 38.462 0.00 0.00 0.00 2.74
2328 13024 5.652452 GTGTTAATATGCTCCTTTTCCCACT 59.348 40.000 0.00 0.00 0.00 4.00
2329 13025 5.417580 TGTGTTAATATGCTCCTTTTCCCAC 59.582 40.000 0.00 0.00 0.00 4.61
2330 13026 5.575157 TGTGTTAATATGCTCCTTTTCCCA 58.425 37.500 0.00 0.00 0.00 4.37
2331 13027 6.071616 TGTTGTGTTAATATGCTCCTTTTCCC 60.072 38.462 0.00 0.00 0.00 3.97
2332 13028 6.919721 TGTTGTGTTAATATGCTCCTTTTCC 58.080 36.000 0.00 0.00 0.00 3.13
2333 13029 8.243426 TGATGTTGTGTTAATATGCTCCTTTTC 58.757 33.333 0.00 0.00 0.00 2.29
2334 13030 8.121305 TGATGTTGTGTTAATATGCTCCTTTT 57.879 30.769 0.00 0.00 0.00 2.27
2335 13031 7.701539 TGATGTTGTGTTAATATGCTCCTTT 57.298 32.000 0.00 0.00 0.00 3.11
2336 13032 7.701539 TTGATGTTGTGTTAATATGCTCCTT 57.298 32.000 0.00 0.00 0.00 3.36
2337 13033 7.776969 AGATTGATGTTGTGTTAATATGCTCCT 59.223 33.333 0.00 0.00 0.00 3.69
2338 13034 7.934457 AGATTGATGTTGTGTTAATATGCTCC 58.066 34.615 0.00 0.00 0.00 4.70
2340 13036 9.060347 CCTAGATTGATGTTGTGTTAATATGCT 57.940 33.333 0.00 0.00 0.00 3.79
2341 13037 8.840321 ACCTAGATTGATGTTGTGTTAATATGC 58.160 33.333 0.00 0.00 0.00 3.14
2349 13045 8.840321 GCAATATAACCTAGATTGATGTTGTGT 58.160 33.333 5.45 0.00 39.15 3.72
2350 13046 8.839343 TGCAATATAACCTAGATTGATGTTGTG 58.161 33.333 5.45 0.00 39.15 3.33
2351 13047 8.978874 TGCAATATAACCTAGATTGATGTTGT 57.021 30.769 5.45 0.00 39.15 3.32
2354 13050 9.578576 ACAATGCAATATAACCTAGATTGATGT 57.421 29.630 5.45 4.42 39.15 3.06
2357 13053 9.625747 TGAACAATGCAATATAACCTAGATTGA 57.374 29.630 5.45 0.00 39.15 2.57
2363 13059 9.814899 CCATTTTGAACAATGCAATATAACCTA 57.185 29.630 0.00 0.00 33.42 3.08
2364 13060 8.538701 TCCATTTTGAACAATGCAATATAACCT 58.461 29.630 0.00 0.00 33.42 3.50
2365 13061 8.715191 TCCATTTTGAACAATGCAATATAACC 57.285 30.769 0.00 0.00 33.42 2.85
2367 13063 8.828644 GCATCCATTTTGAACAATGCAATATAA 58.171 29.630 0.00 0.00 39.36 0.98
2368 13064 7.985752 TGCATCCATTTTGAACAATGCAATATA 59.014 29.630 5.43 0.00 44.50 0.86
2369 13065 6.824196 TGCATCCATTTTGAACAATGCAATAT 59.176 30.769 5.43 0.00 44.50 1.28
2370 13066 6.171213 TGCATCCATTTTGAACAATGCAATA 58.829 32.000 5.43 0.00 44.50 1.90
2371 13067 5.004448 TGCATCCATTTTGAACAATGCAAT 58.996 33.333 5.43 0.00 44.50 3.56
2372 13068 4.386711 TGCATCCATTTTGAACAATGCAA 58.613 34.783 5.43 0.00 44.50 4.08
2373 13069 4.004196 TGCATCCATTTTGAACAATGCA 57.996 36.364 3.87 3.87 45.07 3.96
2374 13070 5.554822 ATTGCATCCATTTTGAACAATGC 57.445 34.783 0.00 0.00 39.85 3.56
2375 13071 8.203937 ACATATTGCATCCATTTTGAACAATG 57.796 30.769 0.00 0.00 34.39 2.82
2376 13072 8.262227 AGACATATTGCATCCATTTTGAACAAT 58.738 29.630 0.00 0.00 32.84 2.71
2377 13073 7.546316 CAGACATATTGCATCCATTTTGAACAA 59.454 33.333 0.00 0.00 0.00 2.83
2378 13074 7.036829 CAGACATATTGCATCCATTTTGAACA 58.963 34.615 0.00 0.00 0.00 3.18
2379 13075 6.019318 GCAGACATATTGCATCCATTTTGAAC 60.019 38.462 0.00 0.00 41.17 3.18
2380 13076 6.044046 GCAGACATATTGCATCCATTTTGAA 58.956 36.000 0.00 0.00 41.17 2.69
2381 13077 5.127356 TGCAGACATATTGCATCCATTTTGA 59.873 36.000 0.00 0.00 45.89 2.69
2382 13078 5.353111 TGCAGACATATTGCATCCATTTTG 58.647 37.500 0.00 0.00 45.89 2.44
2383 13079 5.601583 TGCAGACATATTGCATCCATTTT 57.398 34.783 0.00 0.00 45.89 1.82
2392 13088 1.532505 CGCTGGTTGCAGACATATTGC 60.533 52.381 0.00 0.00 43.06 3.56
2393 13089 1.064505 CCGCTGGTTGCAGACATATTG 59.935 52.381 0.00 0.00 43.06 1.90
2394 13090 1.382522 CCGCTGGTTGCAGACATATT 58.617 50.000 0.00 0.00 43.06 1.28
2395 13091 1.097547 GCCGCTGGTTGCAGACATAT 61.098 55.000 0.00 0.00 43.06 1.78
2396 13092 1.745115 GCCGCTGGTTGCAGACATA 60.745 57.895 0.00 0.00 43.06 2.29
2397 13093 3.058160 GCCGCTGGTTGCAGACAT 61.058 61.111 0.00 0.00 43.06 3.06
2398 13094 4.254709 AGCCGCTGGTTGCAGACA 62.255 61.111 0.00 0.00 43.06 3.41
2399 13095 3.730761 CAGCCGCTGGTTGCAGAC 61.731 66.667 12.93 0.00 43.06 3.51
2413 13109 4.119363 TCAGCCATCCCCTGCAGC 62.119 66.667 8.66 0.00 0.00 5.25
2414 13110 2.124403 GTCAGCCATCCCCTGCAG 60.124 66.667 6.78 6.78 0.00 4.41
2415 13111 4.100084 CGTCAGCCATCCCCTGCA 62.100 66.667 0.00 0.00 0.00 4.41
2416 13112 2.615227 AATCGTCAGCCATCCCCTGC 62.615 60.000 0.00 0.00 0.00 4.85
2417 13113 0.758734 TAATCGTCAGCCATCCCCTG 59.241 55.000 0.00 0.00 0.00 4.45
2418 13114 1.507140 TTAATCGTCAGCCATCCCCT 58.493 50.000 0.00 0.00 0.00 4.79
2419 13115 2.158813 TCTTTAATCGTCAGCCATCCCC 60.159 50.000 0.00 0.00 0.00 4.81
2420 13116 2.872858 GTCTTTAATCGTCAGCCATCCC 59.127 50.000 0.00 0.00 0.00 3.85
2421 13117 2.872858 GGTCTTTAATCGTCAGCCATCC 59.127 50.000 0.00 0.00 0.00 3.51
2422 13118 2.872858 GGGTCTTTAATCGTCAGCCATC 59.127 50.000 0.00 0.00 0.00 3.51
2423 13119 2.741878 CGGGTCTTTAATCGTCAGCCAT 60.742 50.000 0.00 0.00 0.00 4.40
2424 13120 1.404986 CGGGTCTTTAATCGTCAGCCA 60.405 52.381 0.00 0.00 0.00 4.75
2425 13121 1.287425 CGGGTCTTTAATCGTCAGCC 58.713 55.000 0.00 0.00 0.00 4.85
2426 13122 2.005971 ACGGGTCTTTAATCGTCAGC 57.994 50.000 0.00 0.00 0.00 4.26
2427 13123 5.517651 ACCGACGGGTCTTTAATCGTCAG 62.518 52.174 20.00 6.07 46.01 3.51
2428 13124 3.716633 ACCGACGGGTCTTTAATCGTCA 61.717 50.000 20.00 0.00 46.01 4.35
2429 13125 1.135286 ACCGACGGGTCTTTAATCGTC 60.135 52.381 20.00 0.00 46.01 4.20
2430 13126 0.890683 ACCGACGGGTCTTTAATCGT 59.109 50.000 20.00 0.00 46.01 3.73
2431 13127 3.727419 ACCGACGGGTCTTTAATCG 57.273 52.632 20.00 0.00 46.01 3.34
2441 13137 0.945813 TAGCAAACAAAACCGACGGG 59.054 50.000 20.00 2.20 40.11 5.28
2442 13138 2.026915 GTAGCAAACAAAACCGACGG 57.973 50.000 13.61 13.61 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.