Multiple sequence alignment - TraesCS6B01G164800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G164800 chr6B 100.000 2818 0 0 1 2818 171789831 171787014 0.000000e+00 5204
1 TraesCS6B01G164800 chr6B 96.667 450 14 1 2370 2818 171747915 171747466 0.000000e+00 747
2 TraesCS6B01G164800 chr6A 93.144 2392 129 11 1 2367 613365484 613367865 0.000000e+00 3476
3 TraesCS6B01G164800 chr6A 96.164 1903 70 2 1 1903 395871771 395869872 0.000000e+00 3107
4 TraesCS6B01G164800 chr6A 93.035 804 39 9 10 799 162276181 162275381 0.000000e+00 1158
5 TraesCS6B01G164800 chr6A 91.860 516 32 5 1860 2365 395869946 395869431 0.000000e+00 712
6 TraesCS6B01G164800 chr2B 92.208 2400 142 23 1 2364 77332789 77335179 0.000000e+00 3354
7 TraesCS6B01G164800 chr4D 91.806 2392 131 26 1 2364 386931290 386933644 0.000000e+00 3271
8 TraesCS6B01G164800 chr4D 87.832 452 54 1 2366 2816 260689481 260689030 1.920000e-146 529
9 TraesCS6B01G164800 chr6D 91.471 2427 135 29 1 2367 15118199 15120613 0.000000e+00 3269
10 TraesCS6B01G164800 chr6D 87.973 449 52 2 2366 2813 426086568 426087015 1.920000e-146 529
11 TraesCS6B01G164800 chr1A 93.349 1669 91 11 1 1658 565154012 565155671 0.000000e+00 2449
12 TraesCS6B01G164800 chr1A 89.810 736 51 9 1654 2367 565176546 565177279 0.000000e+00 922
13 TraesCS6B01G164800 chr1A 85.660 530 39 19 1856 2359 435375386 435375904 8.940000e-145 523
14 TraesCS6B01G164800 chr7B 91.419 1748 113 19 641 2363 228682905 228681170 0.000000e+00 2362
15 TraesCS6B01G164800 chr7B 93.010 1402 86 7 502 1897 499717348 499715953 0.000000e+00 2036
16 TraesCS6B01G164800 chr7B 86.194 536 51 8 1860 2373 499716021 499715487 2.450000e-155 558
17 TraesCS6B01G164800 chr3A 91.555 1563 102 13 818 2358 55445528 55447082 0.000000e+00 2128
18 TraesCS6B01G164800 chr3A 88.838 439 48 1 2375 2812 101105286 101104848 3.190000e-149 538
19 TraesCS6B01G164800 chr1B 93.575 965 53 4 1383 2343 564741015 564740056 0.000000e+00 1430
20 TraesCS6B01G164800 chr1B 85.398 452 65 1 2366 2816 665916008 665915557 4.250000e-128 468
21 TraesCS6B01G164800 chr5A 95.063 790 35 3 10 796 225611310 225612098 0.000000e+00 1240
22 TraesCS6B01G164800 chr5A 84.107 1013 128 20 1376 2370 190761351 190762348 0.000000e+00 948
23 TraesCS6B01G164800 chr5A 86.859 761 66 15 1634 2366 225614601 225615355 0.000000e+00 821
24 TraesCS6B01G164800 chr3D 93.789 805 39 5 1 796 61930540 61931342 0.000000e+00 1199
25 TraesCS6B01G164800 chr3D 85.606 528 52 9 1860 2365 61933321 61933846 1.490000e-147 532
26 TraesCS6B01G164800 chr3B 89.868 454 45 1 2366 2818 469818286 469817833 1.450000e-162 582
27 TraesCS6B01G164800 chr3B 83.223 453 73 3 2366 2816 369571891 369571440 2.020000e-111 412
28 TraesCS6B01G164800 chr7D 89.755 449 45 1 2366 2813 124834935 124835383 8.760000e-160 573
29 TraesCS6B01G164800 chr1D 85.687 531 38 20 1856 2359 337210631 337211150 2.490000e-145 525
30 TraesCS6B01G164800 chr5D 87.751 449 54 1 2366 2813 449909346 449909794 8.940000e-145 523


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G164800 chr6B 171787014 171789831 2817 True 5204.0 5204 100.0000 1 2818 1 chr6B.!!$R2 2817
1 TraesCS6B01G164800 chr6A 613365484 613367865 2381 False 3476.0 3476 93.1440 1 2367 1 chr6A.!!$F1 2366
2 TraesCS6B01G164800 chr6A 395869431 395871771 2340 True 1909.5 3107 94.0120 1 2365 2 chr6A.!!$R2 2364
3 TraesCS6B01G164800 chr6A 162275381 162276181 800 True 1158.0 1158 93.0350 10 799 1 chr6A.!!$R1 789
4 TraesCS6B01G164800 chr2B 77332789 77335179 2390 False 3354.0 3354 92.2080 1 2364 1 chr2B.!!$F1 2363
5 TraesCS6B01G164800 chr4D 386931290 386933644 2354 False 3271.0 3271 91.8060 1 2364 1 chr4D.!!$F1 2363
6 TraesCS6B01G164800 chr6D 15118199 15120613 2414 False 3269.0 3269 91.4710 1 2367 1 chr6D.!!$F1 2366
7 TraesCS6B01G164800 chr1A 565154012 565155671 1659 False 2449.0 2449 93.3490 1 1658 1 chr1A.!!$F2 1657
8 TraesCS6B01G164800 chr1A 565176546 565177279 733 False 922.0 922 89.8100 1654 2367 1 chr1A.!!$F3 713
9 TraesCS6B01G164800 chr1A 435375386 435375904 518 False 523.0 523 85.6600 1856 2359 1 chr1A.!!$F1 503
10 TraesCS6B01G164800 chr7B 228681170 228682905 1735 True 2362.0 2362 91.4190 641 2363 1 chr7B.!!$R1 1722
11 TraesCS6B01G164800 chr7B 499715487 499717348 1861 True 1297.0 2036 89.6020 502 2373 2 chr7B.!!$R2 1871
12 TraesCS6B01G164800 chr3A 55445528 55447082 1554 False 2128.0 2128 91.5550 818 2358 1 chr3A.!!$F1 1540
13 TraesCS6B01G164800 chr1B 564740056 564741015 959 True 1430.0 1430 93.5750 1383 2343 1 chr1B.!!$R1 960
14 TraesCS6B01G164800 chr5A 225611310 225615355 4045 False 1030.5 1240 90.9610 10 2366 2 chr5A.!!$F2 2356
15 TraesCS6B01G164800 chr5A 190761351 190762348 997 False 948.0 948 84.1070 1376 2370 1 chr5A.!!$F1 994
16 TraesCS6B01G164800 chr3D 61930540 61933846 3306 False 865.5 1199 89.6975 1 2365 2 chr3D.!!$F1 2364
17 TraesCS6B01G164800 chr1D 337210631 337211150 519 False 525.0 525 85.6870 1856 2359 1 chr1D.!!$F1 503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
203 206 2.028043 GCAAGTGCACAACAGCCC 59.972 61.111 21.04 0.0 41.59 5.19 F
1020 1261 1.466856 TGGATGAGGCATTGCTTGAC 58.533 50.000 8.82 0.0 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1476 1717 1.194781 ATCTCAGCACCCGTCTTGGT 61.195 55.0 0.00 0.00 39.96 3.67 R
2629 5445 0.031616 AGCCCCAGTAGAGCTAGCTT 60.032 55.0 20.42 11.34 34.38 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 8.621532 TTTGACTTGATTGTTAGCTAACTGAT 57.378 30.769 31.14 24.79 37.12 2.90
203 206 2.028043 GCAAGTGCACAACAGCCC 59.972 61.111 21.04 0.00 41.59 5.19
236 239 9.798885 GCTAAAGAGTTATATAATTTGCGTCAG 57.201 33.333 0.00 0.00 0.00 3.51
262 265 2.168521 GTGCTAGGAATGTAGTGGAGCA 59.831 50.000 0.00 0.00 36.17 4.26
492 498 7.494211 ACATGTCATGGATGATTTGTTATTGG 58.506 34.615 17.08 0.00 39.30 3.16
580 586 4.310769 AGTGTGCAAGTCACTACTGAATC 58.689 43.478 6.66 0.00 45.81 2.52
673 679 8.106462 AGAGATCGAATAGGATGAGAGTATGAA 58.894 37.037 0.00 0.00 0.00 2.57
704 769 6.182507 TGTGGTGGTCTTCTTTTGTATAGT 57.817 37.500 0.00 0.00 0.00 2.12
837 1078 6.070829 CGTGTGGTATTTTGTATATGCATCG 58.929 40.000 0.19 0.00 0.00 3.84
1020 1261 1.466856 TGGATGAGGCATTGCTTGAC 58.533 50.000 8.82 0.00 0.00 3.18
1164 1405 6.443849 ACATAAGTGGAAGGATGAGGACTTTA 59.556 38.462 0.00 0.00 0.00 1.85
1476 1717 4.242811 AGATTATGCTAATGGTGAGGGGA 58.757 43.478 0.00 0.00 0.00 4.81
1534 2671 4.531732 AGAAGAGCCAATTGAAGTCTCTCT 59.468 41.667 7.12 5.88 33.42 3.10
1898 4618 5.671493 ACTTGGAACTATGTATGTACTGCC 58.329 41.667 0.00 0.00 0.00 4.85
1899 4619 5.425539 ACTTGGAACTATGTATGTACTGCCT 59.574 40.000 0.00 0.00 0.00 4.75
1900 4620 5.950544 TGGAACTATGTATGTACTGCCTT 57.049 39.130 0.00 0.00 0.00 4.35
1901 4621 5.670485 TGGAACTATGTATGTACTGCCTTG 58.330 41.667 0.00 0.00 0.00 3.61
1902 4622 5.188948 TGGAACTATGTATGTACTGCCTTGT 59.811 40.000 0.00 0.00 0.00 3.16
1903 4623 6.113411 GGAACTATGTATGTACTGCCTTGTT 58.887 40.000 0.00 0.00 0.00 2.83
1904 4624 6.037172 GGAACTATGTATGTACTGCCTTGTTG 59.963 42.308 0.00 0.00 0.00 3.33
1905 4625 6.294361 ACTATGTATGTACTGCCTTGTTGA 57.706 37.500 0.00 0.00 0.00 3.18
1906 4626 6.707290 ACTATGTATGTACTGCCTTGTTGAA 58.293 36.000 0.00 0.00 0.00 2.69
1907 4627 6.818644 ACTATGTATGTACTGCCTTGTTGAAG 59.181 38.462 0.00 0.00 0.00 3.02
1908 4628 4.968259 TGTATGTACTGCCTTGTTGAAGT 58.032 39.130 0.00 0.00 0.00 3.01
1909 4629 5.373222 TGTATGTACTGCCTTGTTGAAGTT 58.627 37.500 0.00 0.00 0.00 2.66
1910 4630 4.836125 ATGTACTGCCTTGTTGAAGTTG 57.164 40.909 0.00 0.00 0.00 3.16
1911 4631 2.948979 TGTACTGCCTTGTTGAAGTTGG 59.051 45.455 0.00 0.00 0.00 3.77
1912 4632 2.435372 ACTGCCTTGTTGAAGTTGGA 57.565 45.000 0.00 0.00 0.00 3.53
1913 4633 2.733956 ACTGCCTTGTTGAAGTTGGAA 58.266 42.857 0.00 0.00 0.00 3.53
1914 4634 2.427095 ACTGCCTTGTTGAAGTTGGAAC 59.573 45.455 0.00 0.00 0.00 3.62
1915 4635 2.689983 CTGCCTTGTTGAAGTTGGAACT 59.310 45.455 0.00 0.00 42.04 3.01
1916 4636 3.882888 CTGCCTTGTTGAAGTTGGAACTA 59.117 43.478 0.00 0.00 38.57 2.24
1917 4637 4.469657 TGCCTTGTTGAAGTTGGAACTAT 58.530 39.130 0.00 0.00 38.57 2.12
1918 4638 4.278170 TGCCTTGTTGAAGTTGGAACTATG 59.722 41.667 0.00 0.00 38.57 2.23
1919 4639 4.278419 GCCTTGTTGAAGTTGGAACTATGT 59.722 41.667 0.00 0.00 38.57 2.29
1920 4640 5.472137 GCCTTGTTGAAGTTGGAACTATGTA 59.528 40.000 0.00 0.00 38.57 2.29
1921 4641 6.151144 GCCTTGTTGAAGTTGGAACTATGTAT 59.849 38.462 0.00 0.00 38.57 2.29
1922 4642 7.530010 CCTTGTTGAAGTTGGAACTATGTATG 58.470 38.462 0.00 0.00 38.57 2.39
1923 4643 7.174946 CCTTGTTGAAGTTGGAACTATGTATGT 59.825 37.037 0.00 0.00 38.57 2.29
1924 4644 9.214957 CTTGTTGAAGTTGGAACTATGTATGTA 57.785 33.333 0.00 0.00 38.57 2.29
1925 4645 8.542497 TGTTGAAGTTGGAACTATGTATGTAC 57.458 34.615 0.00 0.00 38.57 2.90
1926 4646 8.372459 TGTTGAAGTTGGAACTATGTATGTACT 58.628 33.333 0.00 0.00 38.57 2.73
1927 4647 8.656849 GTTGAAGTTGGAACTATGTATGTACTG 58.343 37.037 0.00 0.00 38.57 2.74
1928 4648 6.816640 TGAAGTTGGAACTATGTATGTACTGC 59.183 38.462 0.00 0.00 38.57 4.40
2011 4767 6.525578 TGTACGAGACCATATTTGAGAGTT 57.474 37.500 0.00 0.00 0.00 3.01
2284 5100 4.094887 CCAAACAGGTGAATCTGTATTCGG 59.905 45.833 0.00 0.00 46.17 4.30
2345 5161 6.320672 CCAATTCAATACAGAGCTCTCCAATT 59.679 38.462 14.96 10.78 0.00 2.32
2359 5175 4.984295 TCTCCAATTGAGACATCCAAACA 58.016 39.130 7.12 0.00 45.29 2.83
2378 5194 6.573617 AAACAAAGCGTTTGAGAATTTCTG 57.426 33.333 3.03 0.00 46.22 3.02
2379 5195 4.610945 ACAAAGCGTTTGAGAATTTCTGG 58.389 39.130 3.03 0.00 43.26 3.86
2380 5196 3.923017 AAGCGTTTGAGAATTTCTGGG 57.077 42.857 3.03 0.00 0.00 4.45
2381 5197 2.863809 AGCGTTTGAGAATTTCTGGGT 58.136 42.857 3.03 0.00 0.00 4.51
2382 5198 2.814336 AGCGTTTGAGAATTTCTGGGTC 59.186 45.455 3.03 0.00 0.00 4.46
2383 5199 2.552315 GCGTTTGAGAATTTCTGGGTCA 59.448 45.455 3.03 0.00 0.00 4.02
2384 5200 3.004315 GCGTTTGAGAATTTCTGGGTCAA 59.996 43.478 3.03 0.00 0.00 3.18
2385 5201 4.787598 CGTTTGAGAATTTCTGGGTCAAG 58.212 43.478 3.03 0.00 0.00 3.02
2386 5202 4.550422 GTTTGAGAATTTCTGGGTCAAGC 58.450 43.478 3.03 1.01 0.00 4.01
2387 5203 3.795688 TGAGAATTTCTGGGTCAAGCT 57.204 42.857 3.03 0.00 0.00 3.74
2388 5204 4.908601 TGAGAATTTCTGGGTCAAGCTA 57.091 40.909 3.03 0.00 0.00 3.32
2389 5205 4.836825 TGAGAATTTCTGGGTCAAGCTAG 58.163 43.478 3.03 0.00 0.00 3.42
2390 5206 4.532126 TGAGAATTTCTGGGTCAAGCTAGA 59.468 41.667 3.03 0.00 0.00 2.43
2391 5207 5.096443 AGAATTTCTGGGTCAAGCTAGAG 57.904 43.478 0.00 0.00 0.00 2.43
2392 5208 3.922171 ATTTCTGGGTCAAGCTAGAGG 57.078 47.619 0.00 0.00 0.00 3.69
2393 5209 1.573108 TTCTGGGTCAAGCTAGAGGG 58.427 55.000 0.00 0.00 0.00 4.30
2394 5210 0.978146 TCTGGGTCAAGCTAGAGGGC 60.978 60.000 0.00 0.00 0.00 5.19
2395 5211 0.980231 CTGGGTCAAGCTAGAGGGCT 60.980 60.000 0.00 0.00 45.30 5.19
2402 5218 2.689073 AGCTAGAGGGCTTTGAGCA 58.311 52.632 0.00 0.00 44.75 4.26
2403 5219 0.540923 AGCTAGAGGGCTTTGAGCAG 59.459 55.000 0.00 0.00 44.75 4.24
2404 5220 0.463474 GCTAGAGGGCTTTGAGCAGG 60.463 60.000 0.00 0.00 44.75 4.85
2405 5221 0.463474 CTAGAGGGCTTTGAGCAGGC 60.463 60.000 2.04 0.00 44.75 4.85
2406 5222 2.244117 TAGAGGGCTTTGAGCAGGCG 62.244 60.000 2.04 0.00 44.75 5.52
2407 5223 4.729918 AGGGCTTTGAGCAGGCGG 62.730 66.667 2.04 0.00 44.75 6.13
2409 5225 3.741476 GGCTTTGAGCAGGCGGTG 61.741 66.667 2.04 0.00 44.75 4.94
2410 5226 2.669569 GCTTTGAGCAGGCGGTGA 60.670 61.111 0.00 0.00 41.89 4.02
2411 5227 2.260869 GCTTTGAGCAGGCGGTGAA 61.261 57.895 0.00 0.00 41.89 3.18
2412 5228 1.871772 CTTTGAGCAGGCGGTGAAG 59.128 57.895 0.00 0.00 0.00 3.02
2413 5229 1.580845 CTTTGAGCAGGCGGTGAAGG 61.581 60.000 0.00 0.00 0.00 3.46
2414 5230 2.050836 TTTGAGCAGGCGGTGAAGGA 62.051 55.000 0.00 0.00 0.00 3.36
2415 5231 1.841302 TTGAGCAGGCGGTGAAGGAT 61.841 55.000 0.00 0.00 0.00 3.24
2416 5232 1.817099 GAGCAGGCGGTGAAGGATG 60.817 63.158 0.00 0.00 0.00 3.51
2417 5233 3.512516 GCAGGCGGTGAAGGATGC 61.513 66.667 0.00 0.00 0.00 3.91
2418 5234 2.046023 CAGGCGGTGAAGGATGCA 60.046 61.111 0.00 0.00 0.00 3.96
2419 5235 1.452651 CAGGCGGTGAAGGATGCAT 60.453 57.895 0.00 0.00 0.00 3.96
2420 5236 1.452651 AGGCGGTGAAGGATGCATG 60.453 57.895 2.46 0.00 0.00 4.06
2421 5237 2.484062 GGCGGTGAAGGATGCATGG 61.484 63.158 2.46 0.00 0.00 3.66
2422 5238 2.484062 GCGGTGAAGGATGCATGGG 61.484 63.158 2.46 0.00 0.00 4.00
2423 5239 1.077501 CGGTGAAGGATGCATGGGT 60.078 57.895 2.46 0.00 0.00 4.51
2424 5240 0.680921 CGGTGAAGGATGCATGGGTT 60.681 55.000 2.46 0.00 0.00 4.11
2425 5241 1.560505 GGTGAAGGATGCATGGGTTT 58.439 50.000 2.46 0.00 0.00 3.27
2426 5242 1.205417 GGTGAAGGATGCATGGGTTTG 59.795 52.381 2.46 0.00 0.00 2.93
2427 5243 0.896923 TGAAGGATGCATGGGTTTGC 59.103 50.000 2.46 0.00 43.07 3.68
2436 5252 2.892374 GCATGGGTTTGCAATTAGTCC 58.108 47.619 0.00 0.00 42.31 3.85
2437 5253 2.233431 GCATGGGTTTGCAATTAGTCCA 59.767 45.455 0.00 4.65 42.31 4.02
2438 5254 3.118665 GCATGGGTTTGCAATTAGTCCAT 60.119 43.478 0.00 6.82 42.31 3.41
2439 5255 4.685924 CATGGGTTTGCAATTAGTCCATC 58.314 43.478 0.00 0.00 31.91 3.51
2440 5256 3.772387 TGGGTTTGCAATTAGTCCATCA 58.228 40.909 0.00 0.00 0.00 3.07
2441 5257 4.352009 TGGGTTTGCAATTAGTCCATCAT 58.648 39.130 0.00 0.00 0.00 2.45
2442 5258 4.160065 TGGGTTTGCAATTAGTCCATCATG 59.840 41.667 0.00 0.00 0.00 3.07
2443 5259 4.441913 GGGTTTGCAATTAGTCCATCATGG 60.442 45.833 0.00 0.00 39.43 3.66
2444 5260 4.402155 GGTTTGCAATTAGTCCATCATGGA 59.598 41.667 0.66 0.66 45.98 3.41
2456 5272 5.045012 TCCATCATGGATCCTTTTCAGAG 57.955 43.478 14.23 0.00 42.67 3.35
2457 5273 4.723285 TCCATCATGGATCCTTTTCAGAGA 59.277 41.667 14.23 0.00 42.67 3.10
2458 5274 4.820716 CCATCATGGATCCTTTTCAGAGAC 59.179 45.833 14.23 0.00 40.96 3.36
2459 5275 5.397672 CCATCATGGATCCTTTTCAGAGACT 60.398 44.000 14.23 0.00 40.96 3.24
2460 5276 5.350504 TCATGGATCCTTTTCAGAGACTC 57.649 43.478 14.23 0.00 0.00 3.36
2461 5277 3.876274 TGGATCCTTTTCAGAGACTCG 57.124 47.619 14.23 0.00 0.00 4.18
2462 5278 3.431415 TGGATCCTTTTCAGAGACTCGA 58.569 45.455 14.23 0.00 0.00 4.04
2463 5279 4.026744 TGGATCCTTTTCAGAGACTCGAT 58.973 43.478 14.23 0.00 0.00 3.59
2464 5280 4.142071 TGGATCCTTTTCAGAGACTCGATG 60.142 45.833 14.23 0.00 0.00 3.84
2465 5281 3.238108 TCCTTTTCAGAGACTCGATGC 57.762 47.619 0.00 0.00 0.00 3.91
2466 5282 1.923204 CCTTTTCAGAGACTCGATGCG 59.077 52.381 0.00 0.00 0.00 4.73
2467 5283 1.322936 CTTTTCAGAGACTCGATGCGC 59.677 52.381 0.00 0.00 0.00 6.09
2468 5284 0.528017 TTTCAGAGACTCGATGCGCT 59.472 50.000 9.73 0.00 0.00 5.92
2469 5285 0.099613 TTCAGAGACTCGATGCGCTC 59.900 55.000 9.73 2.56 0.00 5.03
2470 5286 0.746204 TCAGAGACTCGATGCGCTCT 60.746 55.000 9.73 0.52 38.19 4.09
2471 5287 0.100325 CAGAGACTCGATGCGCTCTT 59.900 55.000 9.73 0.00 35.66 2.85
2472 5288 0.380378 AGAGACTCGATGCGCTCTTC 59.620 55.000 9.73 1.93 34.23 2.87
2473 5289 0.593773 GAGACTCGATGCGCTCTTCC 60.594 60.000 9.73 0.00 0.00 3.46
2474 5290 1.941734 GACTCGATGCGCTCTTCCG 60.942 63.158 9.73 5.05 0.00 4.30
2475 5291 2.656651 CTCGATGCGCTCTTCCGG 60.657 66.667 9.73 0.00 0.00 5.14
2476 5292 3.126074 CTCGATGCGCTCTTCCGGA 62.126 63.158 9.73 0.00 0.00 5.14
2477 5293 2.202743 CGATGCGCTCTTCCGGAA 60.203 61.111 17.73 17.73 30.90 4.30
2478 5294 1.592669 CGATGCGCTCTTCCGGAAT 60.593 57.895 19.21 0.00 30.90 3.01
2479 5295 1.825285 CGATGCGCTCTTCCGGAATG 61.825 60.000 19.21 14.65 30.90 2.67
2480 5296 2.110734 GATGCGCTCTTCCGGAATGC 62.111 60.000 19.21 22.29 30.90 3.56
2481 5297 2.819595 GCGCTCTTCCGGAATGCA 60.820 61.111 29.32 14.15 0.00 3.96
2482 5298 2.817423 GCGCTCTTCCGGAATGCAG 61.817 63.158 29.32 23.97 0.00 4.41
2483 5299 2.817423 CGCTCTTCCGGAATGCAGC 61.817 63.158 29.32 26.56 0.00 5.25
2484 5300 2.817423 GCTCTTCCGGAATGCAGCG 61.817 63.158 27.07 13.31 0.00 5.18
2485 5301 1.448540 CTCTTCCGGAATGCAGCGT 60.449 57.895 19.21 0.00 0.00 5.07
2486 5302 1.424493 CTCTTCCGGAATGCAGCGTC 61.424 60.000 19.21 0.00 0.00 5.19
2487 5303 2.802667 CTTCCGGAATGCAGCGTCG 61.803 63.158 19.21 0.00 0.00 5.12
2488 5304 3.289704 TTCCGGAATGCAGCGTCGA 62.290 57.895 14.35 0.00 0.00 4.20
2489 5305 3.554692 CCGGAATGCAGCGTCGAC 61.555 66.667 5.18 5.18 0.00 4.20
2490 5306 2.809174 CGGAATGCAGCGTCGACA 60.809 61.111 17.16 0.00 0.00 4.35
2491 5307 2.778679 GGAATGCAGCGTCGACAC 59.221 61.111 17.16 5.80 0.00 3.67
2492 5308 1.738099 GGAATGCAGCGTCGACACT 60.738 57.895 17.16 8.57 0.00 3.55
2493 5309 1.291877 GGAATGCAGCGTCGACACTT 61.292 55.000 17.16 0.00 0.00 3.16
2494 5310 0.093705 GAATGCAGCGTCGACACTTC 59.906 55.000 17.16 6.30 0.00 3.01
2495 5311 0.599991 AATGCAGCGTCGACACTTCA 60.600 50.000 17.16 12.50 0.00 3.02
2496 5312 0.599991 ATGCAGCGTCGACACTTCAA 60.600 50.000 17.16 0.00 0.00 2.69
2497 5313 1.215014 TGCAGCGTCGACACTTCAAG 61.215 55.000 17.16 0.17 0.00 3.02
2498 5314 1.488957 CAGCGTCGACACTTCAAGC 59.511 57.895 17.16 8.79 0.00 4.01
2499 5315 2.016704 AGCGTCGACACTTCAAGCG 61.017 57.895 17.16 0.00 0.00 4.68
2500 5316 2.465920 CGTCGACACTTCAAGCGC 59.534 61.111 17.16 0.00 0.00 5.92
2501 5317 2.465920 GTCGACACTTCAAGCGCG 59.534 61.111 11.55 0.00 0.00 6.86
2502 5318 2.733218 TCGACACTTCAAGCGCGG 60.733 61.111 8.83 0.00 0.00 6.46
2503 5319 3.777925 CGACACTTCAAGCGCGGG 61.778 66.667 8.83 0.00 0.00 6.13
2504 5320 3.423154 GACACTTCAAGCGCGGGG 61.423 66.667 8.83 0.00 0.00 5.73
2505 5321 3.876589 GACACTTCAAGCGCGGGGA 62.877 63.158 8.83 0.00 0.00 4.81
2506 5322 2.436646 CACTTCAAGCGCGGGGAT 60.437 61.111 8.83 0.00 0.00 3.85
2507 5323 1.153449 CACTTCAAGCGCGGGGATA 60.153 57.895 8.83 0.00 0.00 2.59
2508 5324 1.144057 ACTTCAAGCGCGGGGATAG 59.856 57.895 8.83 4.56 0.00 2.08
2509 5325 1.327690 ACTTCAAGCGCGGGGATAGA 61.328 55.000 8.83 0.00 0.00 1.98
2510 5326 0.598680 CTTCAAGCGCGGGGATAGAG 60.599 60.000 8.83 0.00 0.00 2.43
2511 5327 2.028125 TTCAAGCGCGGGGATAGAGG 62.028 60.000 8.83 0.00 0.00 3.69
2512 5328 2.123425 AAGCGCGGGGATAGAGGA 60.123 61.111 8.83 0.00 0.00 3.71
2513 5329 1.760875 AAGCGCGGGGATAGAGGAA 60.761 57.895 8.83 0.00 0.00 3.36
2514 5330 1.335132 AAGCGCGGGGATAGAGGAAA 61.335 55.000 8.83 0.00 0.00 3.13
2515 5331 1.301009 GCGCGGGGATAGAGGAAAG 60.301 63.158 8.83 0.00 0.00 2.62
2516 5332 2.029307 GCGCGGGGATAGAGGAAAGT 62.029 60.000 8.83 0.00 0.00 2.66
2517 5333 1.325355 CGCGGGGATAGAGGAAAGTA 58.675 55.000 0.00 0.00 0.00 2.24
2518 5334 1.269998 CGCGGGGATAGAGGAAAGTAG 59.730 57.143 0.00 0.00 0.00 2.57
2519 5335 1.619332 GCGGGGATAGAGGAAAGTAGG 59.381 57.143 0.00 0.00 0.00 3.18
2520 5336 2.249139 CGGGGATAGAGGAAAGTAGGG 58.751 57.143 0.00 0.00 0.00 3.53
2521 5337 2.158355 CGGGGATAGAGGAAAGTAGGGA 60.158 54.545 0.00 0.00 0.00 4.20
2522 5338 3.693359 CGGGGATAGAGGAAAGTAGGGAA 60.693 52.174 0.00 0.00 0.00 3.97
2523 5339 4.504382 GGGGATAGAGGAAAGTAGGGAAT 58.496 47.826 0.00 0.00 0.00 3.01
2524 5340 5.662597 GGGGATAGAGGAAAGTAGGGAATA 58.337 45.833 0.00 0.00 0.00 1.75
2525 5341 6.273104 GGGGATAGAGGAAAGTAGGGAATAT 58.727 44.000 0.00 0.00 0.00 1.28
2526 5342 6.736179 GGGGATAGAGGAAAGTAGGGAATATT 59.264 42.308 0.00 0.00 0.00 1.28
2527 5343 7.905106 GGGGATAGAGGAAAGTAGGGAATATTA 59.095 40.741 0.00 0.00 0.00 0.98
2528 5344 9.335211 GGGATAGAGGAAAGTAGGGAATATTAA 57.665 37.037 0.00 0.00 0.00 1.40
2540 5356 8.376270 AGTAGGGAATATTAAACTACAGATGGC 58.624 37.037 18.34 0.00 37.17 4.40
2541 5357 6.231211 AGGGAATATTAAACTACAGATGGCG 58.769 40.000 0.00 0.00 0.00 5.69
2542 5358 6.042781 AGGGAATATTAAACTACAGATGGCGA 59.957 38.462 0.00 0.00 0.00 5.54
2543 5359 6.879458 GGGAATATTAAACTACAGATGGCGAT 59.121 38.462 0.00 0.00 0.00 4.58
2544 5360 7.390718 GGGAATATTAAACTACAGATGGCGATT 59.609 37.037 0.00 0.00 0.00 3.34
2545 5361 8.230486 GGAATATTAAACTACAGATGGCGATTG 58.770 37.037 0.00 0.00 0.00 2.67
2546 5362 4.875544 TTAAACTACAGATGGCGATTGC 57.124 40.909 0.00 0.00 41.71 3.56
2565 5381 3.599343 TGCCATGATGGTAATCTATCGC 58.401 45.455 13.84 0.00 40.46 4.58
2566 5382 2.939103 GCCATGATGGTAATCTATCGCC 59.061 50.000 13.84 0.00 40.46 5.54
2567 5383 3.369892 GCCATGATGGTAATCTATCGCCT 60.370 47.826 13.84 0.00 40.46 5.52
2568 5384 4.186926 CCATGATGGTAATCTATCGCCTG 58.813 47.826 2.54 0.00 34.86 4.85
2569 5385 3.961480 TGATGGTAATCTATCGCCTGG 57.039 47.619 0.00 0.00 34.86 4.45
2570 5386 3.506398 TGATGGTAATCTATCGCCTGGA 58.494 45.455 0.00 0.00 34.86 3.86
2571 5387 4.096681 TGATGGTAATCTATCGCCTGGAT 58.903 43.478 0.00 0.00 39.25 3.41
2572 5388 4.160439 TGATGGTAATCTATCGCCTGGATC 59.840 45.833 0.00 0.00 36.55 3.36
2573 5389 3.506398 TGGTAATCTATCGCCTGGATCA 58.494 45.455 0.00 0.00 36.55 2.92
2574 5390 3.901222 TGGTAATCTATCGCCTGGATCAA 59.099 43.478 0.00 0.00 36.55 2.57
2575 5391 4.021104 TGGTAATCTATCGCCTGGATCAAG 60.021 45.833 0.00 0.00 36.55 3.02
2576 5392 2.758736 ATCTATCGCCTGGATCAAGC 57.241 50.000 0.00 0.00 36.55 4.01
2581 5397 3.741860 GCCTGGATCAAGCGATGG 58.258 61.111 0.00 0.00 29.66 3.51
2582 5398 1.146930 GCCTGGATCAAGCGATGGA 59.853 57.895 0.00 0.00 29.66 3.41
2583 5399 0.464373 GCCTGGATCAAGCGATGGAA 60.464 55.000 0.00 0.00 29.66 3.53
2584 5400 2.018644 GCCTGGATCAAGCGATGGAAA 61.019 52.381 0.00 0.00 29.66 3.13
2585 5401 1.672881 CCTGGATCAAGCGATGGAAAC 59.327 52.381 0.00 0.00 29.66 2.78
2597 5413 3.725754 TGGAAACAAGAGGGCTCAC 57.274 52.632 0.00 0.00 37.44 3.51
2598 5414 0.110486 TGGAAACAAGAGGGCTCACC 59.890 55.000 0.00 0.00 37.44 4.02
2599 5415 0.955919 GGAAACAAGAGGGCTCACCG 60.956 60.000 0.00 0.00 46.96 4.94
2600 5416 0.034896 GAAACAAGAGGGCTCACCGA 59.965 55.000 0.00 0.00 46.96 4.69
2601 5417 0.035458 AAACAAGAGGGCTCACCGAG 59.965 55.000 0.00 0.00 46.96 4.63
2602 5418 1.122019 AACAAGAGGGCTCACCGAGT 61.122 55.000 0.00 0.00 46.96 4.18
2603 5419 1.122019 ACAAGAGGGCTCACCGAGTT 61.122 55.000 0.00 0.00 46.96 3.01
2604 5420 0.671781 CAAGAGGGCTCACCGAGTTG 60.672 60.000 0.00 0.00 46.96 3.16
2605 5421 1.831652 AAGAGGGCTCACCGAGTTGG 61.832 60.000 0.00 0.00 46.96 3.77
2606 5422 2.203788 AGGGCTCACCGAGTTGGA 60.204 61.111 2.42 0.00 46.96 3.53
2607 5423 2.232298 GAGGGCTCACCGAGTTGGAG 62.232 65.000 2.42 0.00 46.96 3.86
2608 5424 2.283529 GGGCTCACCGAGTTGGAGA 61.284 63.158 2.42 0.00 42.00 3.71
2609 5425 1.671742 GGCTCACCGAGTTGGAGAA 59.328 57.895 2.42 0.00 42.00 2.87
2610 5426 0.390472 GGCTCACCGAGTTGGAGAAG 60.390 60.000 2.42 0.00 42.00 2.85
2611 5427 0.318762 GCTCACCGAGTTGGAGAAGT 59.681 55.000 2.42 0.00 42.00 3.01
2612 5428 1.937108 GCTCACCGAGTTGGAGAAGTG 60.937 57.143 2.42 0.00 42.00 3.16
2613 5429 0.679505 TCACCGAGTTGGAGAAGTGG 59.320 55.000 2.42 0.00 42.00 4.00
2614 5430 0.951040 CACCGAGTTGGAGAAGTGGC 60.951 60.000 2.42 0.00 42.00 5.01
2615 5431 1.122019 ACCGAGTTGGAGAAGTGGCT 61.122 55.000 2.42 0.00 42.00 4.75
2616 5432 0.895530 CCGAGTTGGAGAAGTGGCTA 59.104 55.000 0.00 0.00 42.00 3.93
2617 5433 1.275291 CCGAGTTGGAGAAGTGGCTAA 59.725 52.381 0.00 0.00 42.00 3.09
2618 5434 2.611518 CGAGTTGGAGAAGTGGCTAAG 58.388 52.381 0.00 0.00 0.00 2.18
2619 5435 2.675317 CGAGTTGGAGAAGTGGCTAAGG 60.675 54.545 0.00 0.00 0.00 2.69
2620 5436 2.567615 GAGTTGGAGAAGTGGCTAAGGA 59.432 50.000 0.00 0.00 0.00 3.36
2621 5437 2.569404 AGTTGGAGAAGTGGCTAAGGAG 59.431 50.000 0.00 0.00 0.00 3.69
2622 5438 2.567615 GTTGGAGAAGTGGCTAAGGAGA 59.432 50.000 0.00 0.00 0.00 3.71
2623 5439 2.902608 TGGAGAAGTGGCTAAGGAGAA 58.097 47.619 0.00 0.00 0.00 2.87
2624 5440 2.567615 TGGAGAAGTGGCTAAGGAGAAC 59.432 50.000 0.00 0.00 0.00 3.01
2625 5441 2.093394 GGAGAAGTGGCTAAGGAGAACC 60.093 54.545 0.00 0.00 0.00 3.62
2626 5442 1.909986 AGAAGTGGCTAAGGAGAACCC 59.090 52.381 0.00 0.00 36.73 4.11
2637 5453 3.123392 AGGAGAACCCTTAAGCTAGCT 57.877 47.619 12.68 12.68 44.85 3.32
2638 5454 3.035363 AGGAGAACCCTTAAGCTAGCTC 58.965 50.000 19.65 2.67 44.85 4.09
2639 5455 3.035363 GGAGAACCCTTAAGCTAGCTCT 58.965 50.000 19.65 8.21 0.00 4.09
2640 5456 4.079096 AGGAGAACCCTTAAGCTAGCTCTA 60.079 45.833 19.65 9.90 44.85 2.43
2641 5457 4.038282 GGAGAACCCTTAAGCTAGCTCTAC 59.962 50.000 19.65 5.21 0.00 2.59
2642 5458 4.874199 AGAACCCTTAAGCTAGCTCTACT 58.126 43.478 19.65 4.58 0.00 2.57
2643 5459 4.647399 AGAACCCTTAAGCTAGCTCTACTG 59.353 45.833 19.65 9.67 0.00 2.74
2644 5460 3.301274 ACCCTTAAGCTAGCTCTACTGG 58.699 50.000 19.65 16.72 0.00 4.00
2645 5461 2.630580 CCCTTAAGCTAGCTCTACTGGG 59.369 54.545 19.65 19.64 0.00 4.45
2646 5462 2.630580 CCTTAAGCTAGCTCTACTGGGG 59.369 54.545 19.65 9.67 0.00 4.96
2647 5463 1.705873 TAAGCTAGCTCTACTGGGGC 58.294 55.000 19.65 0.00 0.00 5.80
2648 5464 0.031616 AAGCTAGCTCTACTGGGGCT 60.032 55.000 19.65 0.00 39.74 5.19
2649 5465 0.031616 AGCTAGCTCTACTGGGGCTT 60.032 55.000 12.68 0.00 37.50 4.35
2650 5466 0.105778 GCTAGCTCTACTGGGGCTTG 59.894 60.000 7.70 0.00 37.50 4.01
2651 5467 0.105778 CTAGCTCTACTGGGGCTTGC 59.894 60.000 0.00 0.00 37.50 4.01
2652 5468 1.676678 TAGCTCTACTGGGGCTTGCG 61.677 60.000 0.00 0.00 37.50 4.85
2653 5469 2.982130 CTCTACTGGGGCTTGCGT 59.018 61.111 0.00 0.00 0.00 5.24
2654 5470 1.153549 CTCTACTGGGGCTTGCGTC 60.154 63.158 0.00 0.00 0.00 5.19
2655 5471 2.509336 CTACTGGGGCTTGCGTCG 60.509 66.667 0.00 0.00 0.00 5.12
2656 5472 4.752879 TACTGGGGCTTGCGTCGC 62.753 66.667 11.10 11.10 0.00 5.19
2661 5477 3.793144 GGGCTTGCGTCGCTTGAG 61.793 66.667 19.50 14.04 0.00 3.02
2662 5478 4.451652 GGCTTGCGTCGCTTGAGC 62.452 66.667 23.33 23.33 37.78 4.26
2672 5488 3.710044 GCTTGAGCGCATGATCGA 58.290 55.556 11.47 0.00 31.60 3.59
2673 5489 1.563655 GCTTGAGCGCATGATCGAG 59.436 57.895 11.47 8.81 43.56 4.04
2674 5490 1.563655 CTTGAGCGCATGATCGAGC 59.436 57.895 11.47 0.00 35.37 5.03
2680 5496 3.101209 GCATGATCGAGCGGCAAA 58.899 55.556 11.60 0.00 0.00 3.68
2681 5497 1.010350 GCATGATCGAGCGGCAAAG 60.010 57.895 11.60 0.00 0.00 2.77
2682 5498 1.431488 GCATGATCGAGCGGCAAAGA 61.431 55.000 11.60 0.00 0.00 2.52
2683 5499 1.224075 CATGATCGAGCGGCAAAGAT 58.776 50.000 1.45 3.57 0.00 2.40
2684 5500 1.194098 CATGATCGAGCGGCAAAGATC 59.806 52.381 18.73 18.73 39.74 2.75
2685 5501 0.175531 TGATCGAGCGGCAAAGATCA 59.824 50.000 22.08 22.08 44.75 2.92
2686 5502 1.290203 GATCGAGCGGCAAAGATCAA 58.710 50.000 19.88 0.00 39.28 2.57
2687 5503 1.260033 GATCGAGCGGCAAAGATCAAG 59.740 52.381 19.88 0.00 39.28 3.02
2688 5504 0.246360 TCGAGCGGCAAAGATCAAGA 59.754 50.000 1.45 0.00 0.00 3.02
2689 5505 0.371645 CGAGCGGCAAAGATCAAGAC 59.628 55.000 1.45 0.00 0.00 3.01
2690 5506 1.442769 GAGCGGCAAAGATCAAGACA 58.557 50.000 1.45 0.00 0.00 3.41
2691 5507 2.012673 GAGCGGCAAAGATCAAGACAT 58.987 47.619 1.45 0.00 0.00 3.06
2692 5508 3.198068 GAGCGGCAAAGATCAAGACATA 58.802 45.455 1.45 0.00 0.00 2.29
2693 5509 3.201290 AGCGGCAAAGATCAAGACATAG 58.799 45.455 1.45 0.00 0.00 2.23
2694 5510 3.118629 AGCGGCAAAGATCAAGACATAGA 60.119 43.478 1.45 0.00 0.00 1.98
2695 5511 3.247173 GCGGCAAAGATCAAGACATAGAG 59.753 47.826 0.00 0.00 0.00 2.43
2696 5512 3.806521 CGGCAAAGATCAAGACATAGAGG 59.193 47.826 0.00 0.00 0.00 3.69
2697 5513 3.563390 GGCAAAGATCAAGACATAGAGGC 59.437 47.826 0.00 0.00 0.00 4.70
2698 5514 4.450053 GCAAAGATCAAGACATAGAGGCT 58.550 43.478 0.00 0.00 36.92 4.58
2699 5515 4.511082 GCAAAGATCAAGACATAGAGGCTC 59.489 45.833 6.34 6.34 30.53 4.70
2700 5516 4.953940 AAGATCAAGACATAGAGGCTCC 57.046 45.455 11.71 0.00 30.53 4.70
2701 5517 2.890311 AGATCAAGACATAGAGGCTCCG 59.110 50.000 11.71 2.55 30.53 4.63
2702 5518 2.145397 TCAAGACATAGAGGCTCCGT 57.855 50.000 11.71 6.19 30.53 4.69
2703 5519 1.751351 TCAAGACATAGAGGCTCCGTG 59.249 52.381 11.71 12.71 30.53 4.94
2704 5520 1.751351 CAAGACATAGAGGCTCCGTGA 59.249 52.381 19.77 1.67 30.53 4.35
2705 5521 1.686355 AGACATAGAGGCTCCGTGAG 58.314 55.000 19.77 6.20 0.00 3.51
2717 5533 4.208632 CGTGAGGGAGATGCCAAC 57.791 61.111 0.00 0.00 38.95 3.77
2718 5534 1.296392 CGTGAGGGAGATGCCAACA 59.704 57.895 0.00 0.00 38.95 3.33
2719 5535 1.021390 CGTGAGGGAGATGCCAACAC 61.021 60.000 9.42 9.42 39.31 3.32
2720 5536 0.678048 GTGAGGGAGATGCCAACACC 60.678 60.000 8.64 0.00 37.88 4.16
2721 5537 1.133181 TGAGGGAGATGCCAACACCA 61.133 55.000 0.00 0.00 38.95 4.17
2722 5538 0.257039 GAGGGAGATGCCAACACCAT 59.743 55.000 0.00 0.00 38.95 3.55
2723 5539 0.033796 AGGGAGATGCCAACACCATG 60.034 55.000 0.00 0.00 38.95 3.66
2724 5540 0.323725 GGGAGATGCCAACACCATGT 60.324 55.000 0.00 0.00 38.95 3.21
2725 5541 1.549203 GGAGATGCCAACACCATGTT 58.451 50.000 0.00 0.00 42.08 2.71
2726 5542 1.895131 GGAGATGCCAACACCATGTTT 59.105 47.619 0.00 0.00 38.77 2.83
2727 5543 2.299867 GGAGATGCCAACACCATGTTTT 59.700 45.455 0.00 0.00 38.77 2.43
2728 5544 3.244181 GGAGATGCCAACACCATGTTTTT 60.244 43.478 0.00 0.00 38.77 1.94
2745 5561 3.347958 TTTTTCAGCTAGTTGCCAACG 57.652 42.857 1.20 0.00 44.23 4.10
2746 5562 1.234821 TTTCAGCTAGTTGCCAACGG 58.765 50.000 1.20 0.77 44.23 4.44
2747 5563 0.605319 TTCAGCTAGTTGCCAACGGG 60.605 55.000 1.20 0.41 44.23 5.28
2748 5564 1.003839 CAGCTAGTTGCCAACGGGA 60.004 57.895 1.20 0.00 44.23 5.14
2749 5565 1.021390 CAGCTAGTTGCCAACGGGAG 61.021 60.000 1.20 2.67 44.23 4.30
2750 5566 1.745489 GCTAGTTGCCAACGGGAGG 60.745 63.158 1.20 0.00 35.59 4.30
2751 5567 1.980052 CTAGTTGCCAACGGGAGGA 59.020 57.895 1.20 0.00 35.59 3.71
2752 5568 0.323629 CTAGTTGCCAACGGGAGGAA 59.676 55.000 1.20 0.00 35.59 3.36
2753 5569 0.766131 TAGTTGCCAACGGGAGGAAA 59.234 50.000 1.20 0.00 35.59 3.13
2754 5570 0.537371 AGTTGCCAACGGGAGGAAAG 60.537 55.000 1.20 0.00 35.59 2.62
2755 5571 1.901464 TTGCCAACGGGAGGAAAGC 60.901 57.895 0.00 0.00 35.59 3.51
2756 5572 2.282180 GCCAACGGGAGGAAAGCA 60.282 61.111 0.00 0.00 35.59 3.91
2757 5573 1.901464 GCCAACGGGAGGAAAGCAA 60.901 57.895 0.00 0.00 35.59 3.91
2758 5574 1.460273 GCCAACGGGAGGAAAGCAAA 61.460 55.000 0.00 0.00 35.59 3.68
2759 5575 0.598065 CCAACGGGAGGAAAGCAAAG 59.402 55.000 0.00 0.00 35.59 2.77
2760 5576 1.604604 CAACGGGAGGAAAGCAAAGA 58.395 50.000 0.00 0.00 0.00 2.52
2761 5577 1.953686 CAACGGGAGGAAAGCAAAGAA 59.046 47.619 0.00 0.00 0.00 2.52
2762 5578 1.605753 ACGGGAGGAAAGCAAAGAAC 58.394 50.000 0.00 0.00 0.00 3.01
2763 5579 1.143073 ACGGGAGGAAAGCAAAGAACT 59.857 47.619 0.00 0.00 0.00 3.01
2764 5580 2.230660 CGGGAGGAAAGCAAAGAACTT 58.769 47.619 0.00 0.00 0.00 2.66
2765 5581 2.623416 CGGGAGGAAAGCAAAGAACTTT 59.377 45.455 0.00 0.00 39.99 2.66
2766 5582 3.818773 CGGGAGGAAAGCAAAGAACTTTA 59.181 43.478 0.00 0.00 37.47 1.85
2767 5583 4.459337 CGGGAGGAAAGCAAAGAACTTTAT 59.541 41.667 0.00 0.00 37.47 1.40
2768 5584 5.646360 CGGGAGGAAAGCAAAGAACTTTATA 59.354 40.000 0.00 0.00 37.47 0.98
2769 5585 6.403309 CGGGAGGAAAGCAAAGAACTTTATAC 60.403 42.308 0.00 0.00 37.47 1.47
2770 5586 6.127703 GGGAGGAAAGCAAAGAACTTTATACC 60.128 42.308 0.00 0.00 37.47 2.73
2771 5587 6.127703 GGAGGAAAGCAAAGAACTTTATACCC 60.128 42.308 0.00 0.00 37.47 3.69
2772 5588 5.715279 AGGAAAGCAAAGAACTTTATACCCC 59.285 40.000 0.00 0.84 37.47 4.95
2773 5589 5.479027 GGAAAGCAAAGAACTTTATACCCCA 59.521 40.000 0.00 0.00 37.47 4.96
2774 5590 6.350194 GGAAAGCAAAGAACTTTATACCCCAG 60.350 42.308 0.00 0.00 37.47 4.45
2775 5591 5.514500 AGCAAAGAACTTTATACCCCAGA 57.486 39.130 0.00 0.00 0.00 3.86
2776 5592 6.079712 AGCAAAGAACTTTATACCCCAGAT 57.920 37.500 0.00 0.00 0.00 2.90
2777 5593 6.122964 AGCAAAGAACTTTATACCCCAGATC 58.877 40.000 0.00 0.00 0.00 2.75
2778 5594 5.885912 GCAAAGAACTTTATACCCCAGATCA 59.114 40.000 0.00 0.00 0.00 2.92
2779 5595 6.038714 GCAAAGAACTTTATACCCCAGATCAG 59.961 42.308 0.00 0.00 0.00 2.90
2780 5596 5.896073 AGAACTTTATACCCCAGATCAGG 57.104 43.478 0.00 0.00 0.00 3.86
2781 5597 4.103311 AGAACTTTATACCCCAGATCAGGC 59.897 45.833 0.00 0.00 0.00 4.85
2782 5598 2.368875 ACTTTATACCCCAGATCAGGCG 59.631 50.000 0.00 0.00 0.00 5.52
2783 5599 2.391926 TTATACCCCAGATCAGGCGA 57.608 50.000 0.00 0.00 0.00 5.54
2784 5600 1.924731 TATACCCCAGATCAGGCGAG 58.075 55.000 0.00 0.00 0.00 5.03
2785 5601 0.833834 ATACCCCAGATCAGGCGAGG 60.834 60.000 0.00 0.00 0.00 4.63
2786 5602 2.238319 TACCCCAGATCAGGCGAGGT 62.238 60.000 8.32 8.32 0.00 3.85
2787 5603 2.503061 CCCAGATCAGGCGAGGTG 59.497 66.667 0.00 0.00 0.00 4.00
2788 5604 2.060383 CCCAGATCAGGCGAGGTGA 61.060 63.158 0.00 0.00 0.00 4.02
2789 5605 1.440893 CCAGATCAGGCGAGGTGAG 59.559 63.158 0.00 0.00 0.00 3.51
2790 5606 1.440893 CAGATCAGGCGAGGTGAGG 59.559 63.158 0.00 0.00 0.00 3.86
2791 5607 1.039785 CAGATCAGGCGAGGTGAGGA 61.040 60.000 0.00 0.00 0.00 3.71
2792 5608 0.754957 AGATCAGGCGAGGTGAGGAG 60.755 60.000 0.00 0.00 0.00 3.69
2793 5609 0.753479 GATCAGGCGAGGTGAGGAGA 60.753 60.000 0.00 0.00 0.00 3.71
2794 5610 0.105760 ATCAGGCGAGGTGAGGAGAT 60.106 55.000 0.00 0.00 0.00 2.75
2795 5611 0.753479 TCAGGCGAGGTGAGGAGATC 60.753 60.000 0.00 0.00 0.00 2.75
2796 5612 1.826054 AGGCGAGGTGAGGAGATCG 60.826 63.158 0.00 0.00 38.19 3.69
2802 5618 4.823276 GTGAGGAGATCGCCACTG 57.177 61.111 18.44 0.00 31.87 3.66
2803 5619 2.193532 GTGAGGAGATCGCCACTGA 58.806 57.895 18.44 0.00 31.87 3.41
2804 5620 0.179124 GTGAGGAGATCGCCACTGAC 60.179 60.000 18.44 3.11 31.87 3.51
2805 5621 1.323271 TGAGGAGATCGCCACTGACC 61.323 60.000 18.44 0.41 0.00 4.02
2806 5622 1.305297 AGGAGATCGCCACTGACCA 60.305 57.895 18.44 0.00 0.00 4.02
2807 5623 1.142748 GGAGATCGCCACTGACCAG 59.857 63.158 11.06 0.00 0.00 4.00
2808 5624 1.323271 GGAGATCGCCACTGACCAGA 61.323 60.000 11.06 0.00 0.00 3.86
2809 5625 0.102120 GAGATCGCCACTGACCAGAG 59.898 60.000 3.76 0.00 0.00 3.35
2810 5626 1.520342 GATCGCCACTGACCAGAGC 60.520 63.158 3.76 5.53 0.00 4.09
2811 5627 2.914777 GATCGCCACTGACCAGAGCC 62.915 65.000 3.76 0.00 0.00 4.70
2813 5629 4.008933 GCCACTGACCAGAGCCGT 62.009 66.667 3.76 0.00 0.00 5.68
2814 5630 2.646175 GCCACTGACCAGAGCCGTA 61.646 63.158 3.76 0.00 0.00 4.02
2815 5631 1.972198 CCACTGACCAGAGCCGTAA 59.028 57.895 3.76 0.00 0.00 3.18
2816 5632 0.320374 CCACTGACCAGAGCCGTAAA 59.680 55.000 3.76 0.00 0.00 2.01
2817 5633 1.673033 CCACTGACCAGAGCCGTAAAG 60.673 57.143 3.76 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.224784 CGTACCCTTAGGCACAACAAAC 59.775 50.000 0.00 0.00 36.11 2.93
236 239 3.489398 CCACTACATTCCTAGCACGAGAC 60.489 52.174 0.00 0.00 0.00 3.36
262 265 7.446001 TTTTTCTTGAACAAGCCAAATGTTT 57.554 28.000 9.38 0.00 40.90 2.83
367 373 5.942236 AGTAAGCAATTGTCATCTCACACAT 59.058 36.000 7.40 0.00 0.00 3.21
451 457 4.202441 GACATGTTGTCTATCCCTTGCAT 58.798 43.478 0.00 0.00 43.73 3.96
492 498 5.118990 TGCTAATTCACTATCCACTTCAGC 58.881 41.667 0.00 0.00 0.00 4.26
580 586 2.616842 AGTTGTTGCCTAAAGTTGGACG 59.383 45.455 0.00 0.00 0.00 4.79
673 679 2.639839 AGAAGACCACCACAGCTACATT 59.360 45.455 0.00 0.00 0.00 2.71
704 769 0.685097 AAGAAGACCACCGCAGCTAA 59.315 50.000 0.00 0.00 0.00 3.09
837 1078 6.845302 TGTCATTCATTAGTTGCATGAAGAC 58.155 36.000 15.29 15.29 42.53 3.01
1020 1261 1.511850 TGTGATGCTCAACAAGGACG 58.488 50.000 0.00 0.00 0.00 4.79
1164 1405 5.048364 GCTAACGACCTCATAGTGATGATCT 60.048 44.000 0.00 0.00 41.33 2.75
1352 1593 3.981211 AGCCTGCACAATAAACACAAAG 58.019 40.909 0.00 0.00 0.00 2.77
1458 1699 2.054799 GGTCCCCTCACCATTAGCATA 58.945 52.381 0.00 0.00 36.32 3.14
1476 1717 1.194781 ATCTCAGCACCCGTCTTGGT 61.195 55.000 0.00 0.00 39.96 3.67
1898 4618 8.099364 ACATACATAGTTCCAACTTCAACAAG 57.901 34.615 0.00 0.00 40.37 3.16
1899 4619 8.995220 GTACATACATAGTTCCAACTTCAACAA 58.005 33.333 0.00 0.00 40.37 2.83
1900 4620 8.372459 AGTACATACATAGTTCCAACTTCAACA 58.628 33.333 0.00 0.00 40.37 3.33
1901 4621 8.656849 CAGTACATACATAGTTCCAACTTCAAC 58.343 37.037 0.00 0.00 40.37 3.18
1902 4622 7.333423 GCAGTACATACATAGTTCCAACTTCAA 59.667 37.037 0.00 0.00 40.37 2.69
1903 4623 6.816640 GCAGTACATACATAGTTCCAACTTCA 59.183 38.462 0.00 0.00 40.37 3.02
1904 4624 6.258068 GGCAGTACATACATAGTTCCAACTTC 59.742 42.308 0.00 0.00 40.37 3.01
1905 4625 6.113411 GGCAGTACATACATAGTTCCAACTT 58.887 40.000 0.00 0.00 40.37 2.66
1906 4626 5.188948 TGGCAGTACATACATAGTTCCAACT 59.811 40.000 0.00 0.00 42.91 3.16
1907 4627 5.424757 TGGCAGTACATACATAGTTCCAAC 58.575 41.667 0.00 0.00 0.00 3.77
1908 4628 5.685520 TGGCAGTACATACATAGTTCCAA 57.314 39.130 0.00 0.00 0.00 3.53
1909 4629 5.130311 ACATGGCAGTACATACATAGTTCCA 59.870 40.000 0.00 0.00 0.00 3.53
1910 4630 5.611374 ACATGGCAGTACATACATAGTTCC 58.389 41.667 0.00 0.00 0.00 3.62
1911 4631 7.382488 CAGTACATGGCAGTACATACATAGTTC 59.618 40.741 21.18 0.00 45.25 3.01
1912 4632 7.147724 ACAGTACATGGCAGTACATACATAGTT 60.148 37.037 21.18 3.54 45.25 2.24
1913 4633 6.323996 ACAGTACATGGCAGTACATACATAGT 59.676 38.462 21.18 10.23 45.25 2.12
1914 4634 6.749139 ACAGTACATGGCAGTACATACATAG 58.251 40.000 21.18 9.83 45.25 2.23
1915 4635 6.724893 ACAGTACATGGCAGTACATACATA 57.275 37.500 21.18 0.00 45.25 2.29
1916 4636 5.614324 ACAGTACATGGCAGTACATACAT 57.386 39.130 21.18 0.00 45.25 2.29
1917 4637 5.414789 AACAGTACATGGCAGTACATACA 57.585 39.130 21.18 0.00 45.25 2.29
1918 4638 7.494625 ACATAAACAGTACATGGCAGTACATAC 59.505 37.037 21.18 8.41 45.25 2.39
1919 4639 7.561251 ACATAAACAGTACATGGCAGTACATA 58.439 34.615 21.18 12.75 45.25 2.29
1920 4640 6.414732 ACATAAACAGTACATGGCAGTACAT 58.585 36.000 21.18 11.37 45.25 2.29
1921 4641 5.800296 ACATAAACAGTACATGGCAGTACA 58.200 37.500 21.18 7.76 45.25 2.90
1922 4642 5.872617 TGACATAAACAGTACATGGCAGTAC 59.127 40.000 15.15 15.15 43.61 2.73
1923 4643 6.043854 TGACATAAACAGTACATGGCAGTA 57.956 37.500 0.00 0.00 32.76 2.74
1924 4644 4.905429 TGACATAAACAGTACATGGCAGT 58.095 39.130 0.00 0.00 32.76 4.40
1925 4645 5.674569 GCTTGACATAAACAGTACATGGCAG 60.675 44.000 0.00 1.29 38.85 4.85
1926 4646 4.155826 GCTTGACATAAACAGTACATGGCA 59.844 41.667 0.00 0.00 35.91 4.92
1927 4647 4.155826 TGCTTGACATAAACAGTACATGGC 59.844 41.667 0.00 0.00 0.00 4.40
1928 4648 5.878332 TGCTTGACATAAACAGTACATGG 57.122 39.130 0.00 0.00 0.00 3.66
2044 4840 5.957842 ATGGTCGTACAATGACAACAATT 57.042 34.783 0.00 0.00 35.87 2.32
2060 4858 3.825308 CATCAGGAAACACAAATGGTCG 58.175 45.455 0.00 0.00 0.00 4.79
2284 5100 3.511146 TCAGTGAGGAAATTGAAATGGCC 59.489 43.478 0.00 0.00 0.00 5.36
2345 5161 2.571212 ACGCTTTGTTTGGATGTCTCA 58.429 42.857 0.00 0.00 0.00 3.27
2359 5175 3.636764 ACCCAGAAATTCTCAAACGCTTT 59.363 39.130 0.00 0.00 0.00 3.51
2367 5183 3.795688 AGCTTGACCCAGAAATTCTCA 57.204 42.857 0.00 0.00 0.00 3.27
2368 5184 5.091261 TCTAGCTTGACCCAGAAATTCTC 57.909 43.478 0.00 0.00 0.00 2.87
2370 5186 4.195416 CCTCTAGCTTGACCCAGAAATTC 58.805 47.826 0.00 0.00 0.00 2.17
2371 5187 3.054065 CCCTCTAGCTTGACCCAGAAATT 60.054 47.826 0.00 0.00 0.00 1.82
2373 5189 1.909302 CCCTCTAGCTTGACCCAGAAA 59.091 52.381 0.00 0.00 0.00 2.52
2374 5190 1.573108 CCCTCTAGCTTGACCCAGAA 58.427 55.000 0.00 0.00 0.00 3.02
2375 5191 0.978146 GCCCTCTAGCTTGACCCAGA 60.978 60.000 0.00 0.00 0.00 3.86
2376 5192 0.980231 AGCCCTCTAGCTTGACCCAG 60.980 60.000 0.00 0.00 41.41 4.45
2377 5193 1.081092 AGCCCTCTAGCTTGACCCA 59.919 57.895 0.00 0.00 41.41 4.51
2378 5194 4.058434 AGCCCTCTAGCTTGACCC 57.942 61.111 0.00 0.00 41.41 4.46
2385 5201 0.463474 CCTGCTCAAAGCCCTCTAGC 60.463 60.000 0.00 0.00 41.51 3.42
2386 5202 0.463474 GCCTGCTCAAAGCCCTCTAG 60.463 60.000 0.00 0.00 41.51 2.43
2387 5203 1.604378 GCCTGCTCAAAGCCCTCTA 59.396 57.895 0.00 0.00 41.51 2.43
2388 5204 2.354343 GCCTGCTCAAAGCCCTCT 59.646 61.111 0.00 0.00 41.51 3.69
2389 5205 3.130160 CGCCTGCTCAAAGCCCTC 61.130 66.667 0.00 0.00 41.51 4.30
2390 5206 4.729918 CCGCCTGCTCAAAGCCCT 62.730 66.667 0.00 0.00 41.51 5.19
2392 5208 3.741476 CACCGCCTGCTCAAAGCC 61.741 66.667 0.00 0.00 41.51 4.35
2393 5209 2.192608 CTTCACCGCCTGCTCAAAGC 62.193 60.000 0.00 0.00 42.82 3.51
2394 5210 1.580845 CCTTCACCGCCTGCTCAAAG 61.581 60.000 0.00 0.00 0.00 2.77
2395 5211 1.600636 CCTTCACCGCCTGCTCAAA 60.601 57.895 0.00 0.00 0.00 2.69
2396 5212 1.841302 ATCCTTCACCGCCTGCTCAA 61.841 55.000 0.00 0.00 0.00 3.02
2397 5213 2.293318 ATCCTTCACCGCCTGCTCA 61.293 57.895 0.00 0.00 0.00 4.26
2398 5214 1.817099 CATCCTTCACCGCCTGCTC 60.817 63.158 0.00 0.00 0.00 4.26
2399 5215 2.270205 CATCCTTCACCGCCTGCT 59.730 61.111 0.00 0.00 0.00 4.24
2400 5216 3.512516 GCATCCTTCACCGCCTGC 61.513 66.667 0.00 0.00 0.00 4.85
2401 5217 1.452651 ATGCATCCTTCACCGCCTG 60.453 57.895 0.00 0.00 0.00 4.85
2402 5218 1.452651 CATGCATCCTTCACCGCCT 60.453 57.895 0.00 0.00 0.00 5.52
2403 5219 2.484062 CCATGCATCCTTCACCGCC 61.484 63.158 0.00 0.00 0.00 6.13
2404 5220 2.484062 CCCATGCATCCTTCACCGC 61.484 63.158 0.00 0.00 0.00 5.68
2405 5221 0.680921 AACCCATGCATCCTTCACCG 60.681 55.000 0.00 0.00 0.00 4.94
2406 5222 1.205417 CAAACCCATGCATCCTTCACC 59.795 52.381 0.00 0.00 0.00 4.02
2407 5223 1.404583 GCAAACCCATGCATCCTTCAC 60.405 52.381 0.00 0.00 45.70 3.18
2408 5224 0.896923 GCAAACCCATGCATCCTTCA 59.103 50.000 0.00 0.00 45.70 3.02
2409 5225 3.746900 GCAAACCCATGCATCCTTC 57.253 52.632 0.00 0.00 45.70 3.46
2416 5232 2.233431 TGGACTAATTGCAAACCCATGC 59.767 45.455 1.71 0.00 46.58 4.06
2417 5233 4.160065 TGATGGACTAATTGCAAACCCATG 59.840 41.667 19.22 5.38 33.53 3.66
2418 5234 4.352009 TGATGGACTAATTGCAAACCCAT 58.648 39.130 1.71 11.65 35.81 4.00
2419 5235 3.772387 TGATGGACTAATTGCAAACCCA 58.228 40.909 1.71 7.14 0.00 4.51
2420 5236 4.441913 CCATGATGGACTAATTGCAAACCC 60.442 45.833 5.27 1.10 40.96 4.11
2421 5237 4.402155 TCCATGATGGACTAATTGCAAACC 59.598 41.667 10.75 3.25 42.67 3.27
2422 5238 5.581126 TCCATGATGGACTAATTGCAAAC 57.419 39.130 10.75 0.00 42.67 2.93
2435 5251 4.820716 GTCTCTGAAAAGGATCCATGATGG 59.179 45.833 15.82 4.74 39.43 3.51
2436 5252 5.682659 AGTCTCTGAAAAGGATCCATGATG 58.317 41.667 15.82 0.00 0.00 3.07
2437 5253 5.453057 CGAGTCTCTGAAAAGGATCCATGAT 60.453 44.000 15.82 0.00 0.00 2.45
2438 5254 4.142071 CGAGTCTCTGAAAAGGATCCATGA 60.142 45.833 15.82 1.70 0.00 3.07
2439 5255 4.118410 CGAGTCTCTGAAAAGGATCCATG 58.882 47.826 15.82 0.00 0.00 3.66
2440 5256 4.026744 TCGAGTCTCTGAAAAGGATCCAT 58.973 43.478 15.82 0.00 0.00 3.41
2441 5257 3.431415 TCGAGTCTCTGAAAAGGATCCA 58.569 45.455 15.82 0.00 0.00 3.41
2442 5258 4.367450 CATCGAGTCTCTGAAAAGGATCC 58.633 47.826 2.48 2.48 0.00 3.36
2443 5259 3.801594 GCATCGAGTCTCTGAAAAGGATC 59.198 47.826 0.00 0.00 0.00 3.36
2444 5260 3.736433 CGCATCGAGTCTCTGAAAAGGAT 60.736 47.826 0.00 0.00 0.00 3.24
2445 5261 2.416027 CGCATCGAGTCTCTGAAAAGGA 60.416 50.000 0.00 0.00 0.00 3.36
2446 5262 1.923204 CGCATCGAGTCTCTGAAAAGG 59.077 52.381 0.00 0.00 0.00 3.11
2447 5263 1.322936 GCGCATCGAGTCTCTGAAAAG 59.677 52.381 0.30 0.00 0.00 2.27
2448 5264 1.067565 AGCGCATCGAGTCTCTGAAAA 60.068 47.619 11.47 0.00 0.00 2.29
2449 5265 0.528017 AGCGCATCGAGTCTCTGAAA 59.472 50.000 11.47 0.00 0.00 2.69
2450 5266 0.099613 GAGCGCATCGAGTCTCTGAA 59.900 55.000 11.47 0.00 0.00 3.02
2451 5267 0.746204 AGAGCGCATCGAGTCTCTGA 60.746 55.000 11.47 0.00 34.87 3.27
2452 5268 0.100325 AAGAGCGCATCGAGTCTCTG 59.900 55.000 11.47 0.00 36.18 3.35
2453 5269 0.380378 GAAGAGCGCATCGAGTCTCT 59.620 55.000 11.47 0.00 37.50 3.10
2454 5270 0.593773 GGAAGAGCGCATCGAGTCTC 60.594 60.000 11.47 0.00 0.00 3.36
2455 5271 1.435515 GGAAGAGCGCATCGAGTCT 59.564 57.895 11.47 0.00 0.00 3.24
2456 5272 1.941734 CGGAAGAGCGCATCGAGTC 60.942 63.158 11.47 0.00 0.00 3.36
2457 5273 2.103143 CGGAAGAGCGCATCGAGT 59.897 61.111 11.47 0.00 0.00 4.18
2458 5274 2.613739 TTCCGGAAGAGCGCATCGAG 62.614 60.000 14.35 2.83 0.00 4.04
2459 5275 2.016393 ATTCCGGAAGAGCGCATCGA 62.016 55.000 23.47 0.00 0.00 3.59
2460 5276 1.592669 ATTCCGGAAGAGCGCATCG 60.593 57.895 23.47 5.51 0.00 3.84
2461 5277 1.937391 CATTCCGGAAGAGCGCATC 59.063 57.895 23.47 4.54 0.00 3.91
2462 5278 2.182842 GCATTCCGGAAGAGCGCAT 61.183 57.895 23.47 0.00 0.00 4.73
2463 5279 2.819595 GCATTCCGGAAGAGCGCA 60.820 61.111 23.47 0.00 0.00 6.09
2464 5280 2.817423 CTGCATTCCGGAAGAGCGC 61.817 63.158 28.58 23.75 0.00 5.92
2465 5281 2.817423 GCTGCATTCCGGAAGAGCG 61.817 63.158 28.58 24.41 0.00 5.03
2466 5282 2.817423 CGCTGCATTCCGGAAGAGC 61.817 63.158 28.21 28.21 0.00 4.09
2467 5283 1.424493 GACGCTGCATTCCGGAAGAG 61.424 60.000 23.47 17.96 0.00 2.85
2468 5284 1.447838 GACGCTGCATTCCGGAAGA 60.448 57.895 23.47 8.05 0.00 2.87
2469 5285 2.802667 CGACGCTGCATTCCGGAAG 61.803 63.158 23.47 15.13 0.00 3.46
2470 5286 2.813474 CGACGCTGCATTCCGGAA 60.813 61.111 21.37 21.37 0.00 4.30
2471 5287 3.754530 TCGACGCTGCATTCCGGA 61.755 61.111 0.00 0.00 0.00 5.14
2472 5288 3.554692 GTCGACGCTGCATTCCGG 61.555 66.667 0.00 0.00 0.00 5.14
2473 5289 2.809174 TGTCGACGCTGCATTCCG 60.809 61.111 11.62 0.00 0.00 4.30
2474 5290 1.291877 AAGTGTCGACGCTGCATTCC 61.292 55.000 30.75 0.69 36.72 3.01
2475 5291 0.093705 GAAGTGTCGACGCTGCATTC 59.906 55.000 30.75 20.41 36.72 2.67
2476 5292 0.599991 TGAAGTGTCGACGCTGCATT 60.600 50.000 31.51 17.28 37.12 3.56
2477 5293 0.599991 TTGAAGTGTCGACGCTGCAT 60.600 50.000 34.42 19.58 41.33 3.96
2478 5294 1.215014 CTTGAAGTGTCGACGCTGCA 61.215 55.000 31.51 31.51 40.10 4.41
2479 5295 1.488957 CTTGAAGTGTCGACGCTGC 59.511 57.895 30.75 28.90 36.72 5.25
2480 5296 1.488957 GCTTGAAGTGTCGACGCTG 59.511 57.895 30.75 19.22 36.72 5.18
2481 5297 2.016704 CGCTTGAAGTGTCGACGCT 61.017 57.895 25.45 25.45 38.54 5.07
2482 5298 2.465920 CGCTTGAAGTGTCGACGC 59.534 61.111 21.32 21.32 0.00 5.19
2483 5299 2.465920 GCGCTTGAAGTGTCGACG 59.534 61.111 11.62 0.00 0.00 5.12
2484 5300 2.465920 CGCGCTTGAAGTGTCGAC 59.534 61.111 9.11 9.11 30.75 4.20
2485 5301 2.733218 CCGCGCTTGAAGTGTCGA 60.733 61.111 18.84 0.00 30.75 4.20
2486 5302 3.777925 CCCGCGCTTGAAGTGTCG 61.778 66.667 5.56 10.83 0.00 4.35
2487 5303 3.423154 CCCCGCGCTTGAAGTGTC 61.423 66.667 5.56 0.00 0.00 3.67
2488 5304 1.895020 TATCCCCGCGCTTGAAGTGT 61.895 55.000 5.56 0.00 0.00 3.55
2489 5305 1.153449 TATCCCCGCGCTTGAAGTG 60.153 57.895 5.56 0.49 0.00 3.16
2490 5306 1.144057 CTATCCCCGCGCTTGAAGT 59.856 57.895 5.56 0.00 0.00 3.01
2491 5307 0.598680 CTCTATCCCCGCGCTTGAAG 60.599 60.000 5.56 0.00 0.00 3.02
2492 5308 1.441729 CTCTATCCCCGCGCTTGAA 59.558 57.895 5.56 0.00 0.00 2.69
2493 5309 2.498941 CCTCTATCCCCGCGCTTGA 61.499 63.158 5.56 0.00 0.00 3.02
2494 5310 2.028125 TTCCTCTATCCCCGCGCTTG 62.028 60.000 5.56 0.00 0.00 4.01
2495 5311 1.335132 TTTCCTCTATCCCCGCGCTT 61.335 55.000 5.56 0.00 0.00 4.68
2496 5312 1.749334 CTTTCCTCTATCCCCGCGCT 61.749 60.000 5.56 0.00 0.00 5.92
2497 5313 1.301009 CTTTCCTCTATCCCCGCGC 60.301 63.158 0.00 0.00 0.00 6.86
2498 5314 1.269998 CTACTTTCCTCTATCCCCGCG 59.730 57.143 0.00 0.00 0.00 6.46
2499 5315 1.619332 CCTACTTTCCTCTATCCCCGC 59.381 57.143 0.00 0.00 0.00 6.13
2500 5316 2.158355 TCCCTACTTTCCTCTATCCCCG 60.158 54.545 0.00 0.00 0.00 5.73
2501 5317 3.632420 TCCCTACTTTCCTCTATCCCC 57.368 52.381 0.00 0.00 0.00 4.81
2502 5318 7.816300 AATATTCCCTACTTTCCTCTATCCC 57.184 40.000 0.00 0.00 0.00 3.85
2514 5330 8.376270 GCCATCTGTAGTTTAATATTCCCTACT 58.624 37.037 14.90 8.01 31.48 2.57
2515 5331 7.331193 CGCCATCTGTAGTTTAATATTCCCTAC 59.669 40.741 0.00 2.13 0.00 3.18
2516 5332 7.233962 TCGCCATCTGTAGTTTAATATTCCCTA 59.766 37.037 0.00 0.00 0.00 3.53
2517 5333 6.042781 TCGCCATCTGTAGTTTAATATTCCCT 59.957 38.462 0.00 0.00 0.00 4.20
2518 5334 6.228258 TCGCCATCTGTAGTTTAATATTCCC 58.772 40.000 0.00 0.00 0.00 3.97
2519 5335 7.907214 ATCGCCATCTGTAGTTTAATATTCC 57.093 36.000 0.00 0.00 0.00 3.01
2520 5336 7.746475 GCAATCGCCATCTGTAGTTTAATATTC 59.254 37.037 0.00 0.00 0.00 1.75
2521 5337 7.584987 GCAATCGCCATCTGTAGTTTAATATT 58.415 34.615 0.00 0.00 0.00 1.28
2522 5338 7.133891 GCAATCGCCATCTGTAGTTTAATAT 57.866 36.000 0.00 0.00 0.00 1.28
2523 5339 6.539649 GCAATCGCCATCTGTAGTTTAATA 57.460 37.500 0.00 0.00 0.00 0.98
2524 5340 5.424121 GCAATCGCCATCTGTAGTTTAAT 57.576 39.130 0.00 0.00 0.00 1.40
2525 5341 4.875544 GCAATCGCCATCTGTAGTTTAA 57.124 40.909 0.00 0.00 0.00 1.52
2539 5355 3.207474 GATTACCATCATGGCAATCGC 57.793 47.619 13.05 0.00 39.65 4.58
2541 5357 5.220739 GCGATAGATTACCATCATGGCAATC 60.221 44.000 18.91 18.91 46.10 2.67
2542 5358 4.637534 GCGATAGATTACCATCATGGCAAT 59.362 41.667 2.52 1.82 39.22 3.56
2543 5359 4.002982 GCGATAGATTACCATCATGGCAA 58.997 43.478 2.52 0.00 39.22 4.52
2544 5360 3.599343 GCGATAGATTACCATCATGGCA 58.401 45.455 2.52 0.00 39.22 4.92
2545 5361 2.939103 GGCGATAGATTACCATCATGGC 59.061 50.000 2.52 0.00 39.22 4.40
2546 5362 4.186926 CAGGCGATAGATTACCATCATGG 58.813 47.826 0.54 0.54 41.13 3.66
2547 5363 4.081476 TCCAGGCGATAGATTACCATCATG 60.081 45.833 0.00 0.00 39.76 3.07
2548 5364 4.096681 TCCAGGCGATAGATTACCATCAT 58.903 43.478 0.00 0.00 39.76 2.45
2549 5365 3.506398 TCCAGGCGATAGATTACCATCA 58.494 45.455 0.00 0.00 39.76 3.07
2550 5366 4.160439 TGATCCAGGCGATAGATTACCATC 59.840 45.833 0.00 0.00 39.76 3.51
2551 5367 4.096681 TGATCCAGGCGATAGATTACCAT 58.903 43.478 0.00 0.00 39.76 3.55
2552 5368 3.506398 TGATCCAGGCGATAGATTACCA 58.494 45.455 0.00 0.00 39.76 3.25
2553 5369 4.499183 CTTGATCCAGGCGATAGATTACC 58.501 47.826 0.00 0.00 39.76 2.85
2554 5370 3.929610 GCTTGATCCAGGCGATAGATTAC 59.070 47.826 0.00 0.00 39.76 1.89
2555 5371 4.193826 GCTTGATCCAGGCGATAGATTA 57.806 45.455 0.00 0.00 39.76 1.75
2556 5372 3.051081 GCTTGATCCAGGCGATAGATT 57.949 47.619 0.00 0.00 39.76 2.40
2557 5373 2.758736 GCTTGATCCAGGCGATAGAT 57.241 50.000 0.00 0.00 39.76 1.98
2564 5380 0.464373 TTCCATCGCTTGATCCAGGC 60.464 55.000 0.00 0.00 33.03 4.85
2565 5381 1.672881 GTTTCCATCGCTTGATCCAGG 59.327 52.381 0.00 0.00 0.00 4.45
2566 5382 2.358957 TGTTTCCATCGCTTGATCCAG 58.641 47.619 0.00 0.00 0.00 3.86
2567 5383 2.488204 TGTTTCCATCGCTTGATCCA 57.512 45.000 0.00 0.00 0.00 3.41
2568 5384 3.009723 TCTTGTTTCCATCGCTTGATCC 58.990 45.455 0.00 0.00 0.00 3.36
2569 5385 3.064545 CCTCTTGTTTCCATCGCTTGATC 59.935 47.826 0.00 0.00 0.00 2.92
2570 5386 3.012518 CCTCTTGTTTCCATCGCTTGAT 58.987 45.455 0.00 0.00 0.00 2.57
2571 5387 2.426522 CCTCTTGTTTCCATCGCTTGA 58.573 47.619 0.00 0.00 0.00 3.02
2572 5388 1.470098 CCCTCTTGTTTCCATCGCTTG 59.530 52.381 0.00 0.00 0.00 4.01
2573 5389 1.826385 CCCTCTTGTTTCCATCGCTT 58.174 50.000 0.00 0.00 0.00 4.68
2574 5390 0.678048 GCCCTCTTGTTTCCATCGCT 60.678 55.000 0.00 0.00 0.00 4.93
2575 5391 0.678048 AGCCCTCTTGTTTCCATCGC 60.678 55.000 0.00 0.00 0.00 4.58
2576 5392 1.339055 TGAGCCCTCTTGTTTCCATCG 60.339 52.381 0.00 0.00 0.00 3.84
2577 5393 2.087646 GTGAGCCCTCTTGTTTCCATC 58.912 52.381 0.00 0.00 0.00 3.51
2578 5394 1.272147 GGTGAGCCCTCTTGTTTCCAT 60.272 52.381 0.00 0.00 0.00 3.41
2579 5395 0.110486 GGTGAGCCCTCTTGTTTCCA 59.890 55.000 0.00 0.00 0.00 3.53
2580 5396 0.955919 CGGTGAGCCCTCTTGTTTCC 60.956 60.000 0.00 0.00 0.00 3.13
2581 5397 0.034896 TCGGTGAGCCCTCTTGTTTC 59.965 55.000 0.00 0.00 0.00 2.78
2582 5398 0.035458 CTCGGTGAGCCCTCTTGTTT 59.965 55.000 0.00 0.00 0.00 2.83
2583 5399 1.122019 ACTCGGTGAGCCCTCTTGTT 61.122 55.000 0.00 0.00 32.04 2.83
2584 5400 1.122019 AACTCGGTGAGCCCTCTTGT 61.122 55.000 0.00 0.00 32.04 3.16
2585 5401 0.671781 CAACTCGGTGAGCCCTCTTG 60.672 60.000 0.00 0.00 32.04 3.02
2586 5402 1.674057 CAACTCGGTGAGCCCTCTT 59.326 57.895 0.00 0.00 32.04 2.85
2587 5403 2.286523 CCAACTCGGTGAGCCCTCT 61.287 63.158 0.00 0.00 32.04 3.69
2588 5404 2.232298 CTCCAACTCGGTGAGCCCTC 62.232 65.000 0.00 0.00 35.57 4.30
2589 5405 2.203788 TCCAACTCGGTGAGCCCT 60.204 61.111 0.00 0.00 35.57 5.19
2590 5406 1.827399 TTCTCCAACTCGGTGAGCCC 61.827 60.000 0.00 0.00 38.50 5.19
2591 5407 0.390472 CTTCTCCAACTCGGTGAGCC 60.390 60.000 0.00 0.00 38.50 4.70
2592 5408 0.318762 ACTTCTCCAACTCGGTGAGC 59.681 55.000 0.00 0.00 38.50 4.26
2593 5409 1.337260 CCACTTCTCCAACTCGGTGAG 60.337 57.143 0.00 0.00 38.50 3.51
2594 5410 0.679505 CCACTTCTCCAACTCGGTGA 59.320 55.000 0.00 0.00 35.45 4.02
2595 5411 0.951040 GCCACTTCTCCAACTCGGTG 60.951 60.000 0.00 0.00 35.57 4.94
2596 5412 1.122019 AGCCACTTCTCCAACTCGGT 61.122 55.000 0.00 0.00 35.57 4.69
2597 5413 0.895530 TAGCCACTTCTCCAACTCGG 59.104 55.000 0.00 0.00 0.00 4.63
2598 5414 2.611518 CTTAGCCACTTCTCCAACTCG 58.388 52.381 0.00 0.00 0.00 4.18
2599 5415 2.567615 TCCTTAGCCACTTCTCCAACTC 59.432 50.000 0.00 0.00 0.00 3.01
2600 5416 2.569404 CTCCTTAGCCACTTCTCCAACT 59.431 50.000 0.00 0.00 0.00 3.16
2601 5417 2.567615 TCTCCTTAGCCACTTCTCCAAC 59.432 50.000 0.00 0.00 0.00 3.77
2602 5418 2.902608 TCTCCTTAGCCACTTCTCCAA 58.097 47.619 0.00 0.00 0.00 3.53
2603 5419 2.567615 GTTCTCCTTAGCCACTTCTCCA 59.432 50.000 0.00 0.00 0.00 3.86
2604 5420 2.093394 GGTTCTCCTTAGCCACTTCTCC 60.093 54.545 0.00 0.00 0.00 3.71
2605 5421 2.093394 GGGTTCTCCTTAGCCACTTCTC 60.093 54.545 0.00 0.00 33.39 2.87
2606 5422 1.909986 GGGTTCTCCTTAGCCACTTCT 59.090 52.381 0.00 0.00 33.39 2.85
2607 5423 1.909986 AGGGTTCTCCTTAGCCACTTC 59.090 52.381 0.00 0.00 45.47 3.01
2608 5424 2.046280 AGGGTTCTCCTTAGCCACTT 57.954 50.000 0.00 0.00 45.47 3.16
2609 5425 3.817826 AGGGTTCTCCTTAGCCACT 57.182 52.632 0.00 0.00 45.47 4.00
2618 5434 3.035363 AGAGCTAGCTTAAGGGTTCTCC 58.965 50.000 20.42 0.76 0.00 3.71
2619 5435 4.891168 AGTAGAGCTAGCTTAAGGGTTCTC 59.109 45.833 20.42 1.65 0.00 2.87
2620 5436 4.647399 CAGTAGAGCTAGCTTAAGGGTTCT 59.353 45.833 20.42 11.20 0.00 3.01
2621 5437 4.202172 CCAGTAGAGCTAGCTTAAGGGTTC 60.202 50.000 20.42 3.25 0.00 3.62
2622 5438 3.707102 CCAGTAGAGCTAGCTTAAGGGTT 59.293 47.826 20.42 0.00 0.00 4.11
2623 5439 3.301274 CCAGTAGAGCTAGCTTAAGGGT 58.699 50.000 20.42 2.51 0.00 4.34
2624 5440 2.630580 CCCAGTAGAGCTAGCTTAAGGG 59.369 54.545 20.42 20.26 0.00 3.95
2625 5441 2.630580 CCCCAGTAGAGCTAGCTTAAGG 59.369 54.545 20.42 15.67 0.00 2.69
2626 5442 2.036604 GCCCCAGTAGAGCTAGCTTAAG 59.963 54.545 20.42 7.58 0.00 1.85
2627 5443 2.040178 GCCCCAGTAGAGCTAGCTTAA 58.960 52.381 20.42 7.31 0.00 1.85
2628 5444 1.218196 AGCCCCAGTAGAGCTAGCTTA 59.782 52.381 20.42 10.33 34.38 3.09
2629 5445 0.031616 AGCCCCAGTAGAGCTAGCTT 60.032 55.000 20.42 11.34 34.38 3.74
2630 5446 0.031616 AAGCCCCAGTAGAGCTAGCT 60.032 55.000 19.45 19.45 35.30 3.32
2631 5447 0.105778 CAAGCCCCAGTAGAGCTAGC 59.894 60.000 6.62 6.62 35.30 3.42
2632 5448 0.105778 GCAAGCCCCAGTAGAGCTAG 59.894 60.000 0.00 0.00 35.30 3.42
2633 5449 1.676678 CGCAAGCCCCAGTAGAGCTA 61.677 60.000 0.00 0.00 35.30 3.32
2634 5450 2.993853 GCAAGCCCCAGTAGAGCT 59.006 61.111 0.00 0.00 38.88 4.09
2635 5451 2.512515 CGCAAGCCCCAGTAGAGC 60.513 66.667 0.00 0.00 0.00 4.09
2636 5452 1.153549 GACGCAAGCCCCAGTAGAG 60.154 63.158 0.00 0.00 45.62 2.43
2637 5453 2.978824 GACGCAAGCCCCAGTAGA 59.021 61.111 0.00 0.00 45.62 2.59
2638 5454 2.509336 CGACGCAAGCCCCAGTAG 60.509 66.667 0.00 0.00 45.62 2.57
2639 5455 4.752879 GCGACGCAAGCCCCAGTA 62.753 66.667 16.42 0.00 45.62 2.74
2644 5460 3.793144 CTCAAGCGACGCAAGCCC 61.793 66.667 23.70 0.00 45.62 5.19
2645 5461 4.451652 GCTCAAGCGACGCAAGCC 62.452 66.667 23.70 8.66 45.62 4.35
2655 5471 1.563655 CTCGATCATGCGCTCAAGC 59.436 57.895 9.73 0.00 37.78 4.01
2656 5472 1.563655 GCTCGATCATGCGCTCAAG 59.436 57.895 9.73 0.00 0.00 3.02
2657 5473 2.232974 CGCTCGATCATGCGCTCAA 61.233 57.895 9.73 0.00 45.50 3.02
2658 5474 2.656328 CGCTCGATCATGCGCTCA 60.656 61.111 9.73 0.00 45.50 4.26
2663 5479 1.010350 CTTTGCCGCTCGATCATGC 60.010 57.895 0.00 0.00 0.00 4.06
2664 5480 1.194098 GATCTTTGCCGCTCGATCATG 59.806 52.381 10.33 0.00 34.04 3.07
2665 5481 1.202568 TGATCTTTGCCGCTCGATCAT 60.203 47.619 12.62 0.00 37.82 2.45
2666 5482 0.175531 TGATCTTTGCCGCTCGATCA 59.824 50.000 12.62 12.62 39.73 2.92
2667 5483 1.260033 CTTGATCTTTGCCGCTCGATC 59.740 52.381 0.00 9.00 34.36 3.69
2668 5484 1.134699 TCTTGATCTTTGCCGCTCGAT 60.135 47.619 0.00 0.00 0.00 3.59
2669 5485 0.246360 TCTTGATCTTTGCCGCTCGA 59.754 50.000 0.00 0.00 0.00 4.04
2670 5486 0.371645 GTCTTGATCTTTGCCGCTCG 59.628 55.000 0.00 0.00 0.00 5.03
2671 5487 1.442769 TGTCTTGATCTTTGCCGCTC 58.557 50.000 0.00 0.00 0.00 5.03
2672 5488 2.119801 ATGTCTTGATCTTTGCCGCT 57.880 45.000 0.00 0.00 0.00 5.52
2673 5489 3.198068 TCTATGTCTTGATCTTTGCCGC 58.802 45.455 0.00 0.00 0.00 6.53
2674 5490 3.806521 CCTCTATGTCTTGATCTTTGCCG 59.193 47.826 0.00 0.00 0.00 5.69
2675 5491 3.563390 GCCTCTATGTCTTGATCTTTGCC 59.437 47.826 0.00 0.00 0.00 4.52
2676 5492 4.450053 AGCCTCTATGTCTTGATCTTTGC 58.550 43.478 0.00 0.00 0.00 3.68
2677 5493 5.055812 GGAGCCTCTATGTCTTGATCTTTG 58.944 45.833 0.00 0.00 0.00 2.77
2678 5494 4.202202 CGGAGCCTCTATGTCTTGATCTTT 60.202 45.833 0.00 0.00 0.00 2.52
2679 5495 3.320541 CGGAGCCTCTATGTCTTGATCTT 59.679 47.826 0.00 0.00 0.00 2.40
2680 5496 2.890311 CGGAGCCTCTATGTCTTGATCT 59.110 50.000 0.00 0.00 0.00 2.75
2681 5497 2.625790 ACGGAGCCTCTATGTCTTGATC 59.374 50.000 0.00 0.00 0.00 2.92
2682 5498 2.363680 CACGGAGCCTCTATGTCTTGAT 59.636 50.000 0.00 0.00 0.00 2.57
2683 5499 1.751351 CACGGAGCCTCTATGTCTTGA 59.249 52.381 0.00 0.00 0.00 3.02
2684 5500 1.751351 TCACGGAGCCTCTATGTCTTG 59.249 52.381 0.00 0.00 0.00 3.02
2685 5501 2.028130 CTCACGGAGCCTCTATGTCTT 58.972 52.381 0.00 0.00 0.00 3.01
2686 5502 1.686355 CTCACGGAGCCTCTATGTCT 58.314 55.000 0.00 0.00 0.00 3.41
2687 5503 0.671251 CCTCACGGAGCCTCTATGTC 59.329 60.000 0.00 0.00 0.00 3.06
2688 5504 0.757188 CCCTCACGGAGCCTCTATGT 60.757 60.000 0.00 0.00 0.00 2.29
2689 5505 0.468214 TCCCTCACGGAGCCTCTATG 60.468 60.000 0.00 0.00 34.86 2.23
2690 5506 1.931296 TCCCTCACGGAGCCTCTAT 59.069 57.895 0.00 0.00 34.86 1.98
2691 5507 3.423380 TCCCTCACGGAGCCTCTA 58.577 61.111 0.00 0.00 34.86 2.43
2698 5514 1.612146 TTGGCATCTCCCTCACGGA 60.612 57.895 0.00 0.00 38.83 4.69
2699 5515 1.450312 GTTGGCATCTCCCTCACGG 60.450 63.158 0.00 0.00 0.00 4.94
2700 5516 1.021390 GTGTTGGCATCTCCCTCACG 61.021 60.000 0.00 0.00 31.52 4.35
2701 5517 0.678048 GGTGTTGGCATCTCCCTCAC 60.678 60.000 5.53 0.00 36.99 3.51
2702 5518 1.133181 TGGTGTTGGCATCTCCCTCA 61.133 55.000 12.71 0.00 0.00 3.86
2703 5519 0.257039 ATGGTGTTGGCATCTCCCTC 59.743 55.000 12.71 0.00 0.00 4.30
2704 5520 0.033796 CATGGTGTTGGCATCTCCCT 60.034 55.000 12.71 2.18 0.00 4.20
2705 5521 0.323725 ACATGGTGTTGGCATCTCCC 60.324 55.000 12.71 6.16 0.00 4.30
2706 5522 1.549203 AACATGGTGTTGGCATCTCC 58.451 50.000 9.23 9.23 39.45 3.71
2707 5523 3.665745 AAAACATGGTGTTGGCATCTC 57.334 42.857 0.00 0.00 40.14 2.75
2725 5541 2.034053 CCGTTGGCAACTAGCTGAAAAA 59.966 45.455 26.26 0.00 44.79 1.94
2726 5542 1.606668 CCGTTGGCAACTAGCTGAAAA 59.393 47.619 26.26 0.00 44.79 2.29
2727 5543 1.234821 CCGTTGGCAACTAGCTGAAA 58.765 50.000 26.26 0.00 44.79 2.69
2728 5544 0.605319 CCCGTTGGCAACTAGCTGAA 60.605 55.000 26.26 0.00 44.79 3.02
2729 5545 1.003839 CCCGTTGGCAACTAGCTGA 60.004 57.895 26.26 0.00 44.79 4.26
2730 5546 1.003839 TCCCGTTGGCAACTAGCTG 60.004 57.895 26.26 11.45 44.79 4.24
2731 5547 1.296715 CTCCCGTTGGCAACTAGCT 59.703 57.895 26.26 0.00 44.79 3.32
2732 5548 1.745489 CCTCCCGTTGGCAACTAGC 60.745 63.158 26.26 2.08 44.65 3.42
2733 5549 0.323629 TTCCTCCCGTTGGCAACTAG 59.676 55.000 26.26 19.32 37.61 2.57
2734 5550 0.766131 TTTCCTCCCGTTGGCAACTA 59.234 50.000 26.26 11.87 37.61 2.24
2735 5551 0.537371 CTTTCCTCCCGTTGGCAACT 60.537 55.000 26.26 0.00 37.61 3.16
2736 5552 1.956802 CTTTCCTCCCGTTGGCAAC 59.043 57.895 20.27 20.27 0.00 4.17
2737 5553 1.901464 GCTTTCCTCCCGTTGGCAA 60.901 57.895 0.00 0.00 0.00 4.52
2738 5554 2.282180 GCTTTCCTCCCGTTGGCA 60.282 61.111 0.00 0.00 0.00 4.92
2739 5555 1.460273 TTTGCTTTCCTCCCGTTGGC 61.460 55.000 0.00 0.00 0.00 4.52
2740 5556 0.598065 CTTTGCTTTCCTCCCGTTGG 59.402 55.000 0.00 0.00 0.00 3.77
2741 5557 1.604604 TCTTTGCTTTCCTCCCGTTG 58.395 50.000 0.00 0.00 0.00 4.10
2742 5558 1.954382 GTTCTTTGCTTTCCTCCCGTT 59.046 47.619 0.00 0.00 0.00 4.44
2743 5559 1.143073 AGTTCTTTGCTTTCCTCCCGT 59.857 47.619 0.00 0.00 0.00 5.28
2744 5560 1.897560 AGTTCTTTGCTTTCCTCCCG 58.102 50.000 0.00 0.00 0.00 5.14
2745 5561 5.984695 ATAAAGTTCTTTGCTTTCCTCCC 57.015 39.130 7.90 0.00 37.37 4.30
2746 5562 6.127703 GGGTATAAAGTTCTTTGCTTTCCTCC 60.128 42.308 7.90 0.00 37.37 4.30
2747 5563 6.127703 GGGGTATAAAGTTCTTTGCTTTCCTC 60.128 42.308 7.90 1.31 37.37 3.71
2748 5564 5.715279 GGGGTATAAAGTTCTTTGCTTTCCT 59.285 40.000 7.90 0.00 37.37 3.36
2749 5565 5.479027 TGGGGTATAAAGTTCTTTGCTTTCC 59.521 40.000 7.90 5.41 37.37 3.13
2750 5566 6.433093 TCTGGGGTATAAAGTTCTTTGCTTTC 59.567 38.462 7.90 0.00 37.37 2.62
2751 5567 6.311735 TCTGGGGTATAAAGTTCTTTGCTTT 58.688 36.000 7.90 0.00 39.26 3.51
2752 5568 5.887754 TCTGGGGTATAAAGTTCTTTGCTT 58.112 37.500 7.90 0.00 0.00 3.91
2753 5569 5.514500 TCTGGGGTATAAAGTTCTTTGCT 57.486 39.130 7.90 0.00 0.00 3.91
2754 5570 5.885912 TGATCTGGGGTATAAAGTTCTTTGC 59.114 40.000 7.90 0.00 0.00 3.68
2755 5571 6.543831 CCTGATCTGGGGTATAAAGTTCTTTG 59.456 42.308 10.73 0.00 0.00 2.77
2756 5572 6.663734 CCTGATCTGGGGTATAAAGTTCTTT 58.336 40.000 10.73 3.33 0.00 2.52
2757 5573 5.398012 GCCTGATCTGGGGTATAAAGTTCTT 60.398 44.000 19.23 0.00 0.00 2.52
2758 5574 4.103311 GCCTGATCTGGGGTATAAAGTTCT 59.897 45.833 19.23 0.00 0.00 3.01
2759 5575 4.390264 GCCTGATCTGGGGTATAAAGTTC 58.610 47.826 19.23 0.00 0.00 3.01
2760 5576 3.181454 CGCCTGATCTGGGGTATAAAGTT 60.181 47.826 22.85 0.00 35.60 2.66
2761 5577 2.368875 CGCCTGATCTGGGGTATAAAGT 59.631 50.000 22.85 0.00 35.60 2.66
2762 5578 2.632996 TCGCCTGATCTGGGGTATAAAG 59.367 50.000 27.60 0.00 40.43 1.85
2763 5579 2.632996 CTCGCCTGATCTGGGGTATAAA 59.367 50.000 27.60 12.74 40.43 1.40
2764 5580 2.248248 CTCGCCTGATCTGGGGTATAA 58.752 52.381 27.60 13.04 40.43 0.98
2765 5581 1.550179 CCTCGCCTGATCTGGGGTATA 60.550 57.143 27.60 13.34 40.43 1.47
2766 5582 0.833834 CCTCGCCTGATCTGGGGTAT 60.834 60.000 27.60 0.00 40.43 2.73
2767 5583 1.457643 CCTCGCCTGATCTGGGGTA 60.458 63.158 27.60 16.92 40.43 3.69
2768 5584 2.765807 CCTCGCCTGATCTGGGGT 60.766 66.667 27.60 0.00 40.43 4.95
2769 5585 2.765807 ACCTCGCCTGATCTGGGG 60.766 66.667 24.53 24.53 40.85 4.96
2770 5586 2.025767 CTCACCTCGCCTGATCTGGG 62.026 65.000 19.23 10.33 0.00 4.45
2771 5587 1.440893 CTCACCTCGCCTGATCTGG 59.559 63.158 14.07 14.07 0.00 3.86
2772 5588 1.039785 TCCTCACCTCGCCTGATCTG 61.040 60.000 0.00 0.00 0.00 2.90
2773 5589 0.754957 CTCCTCACCTCGCCTGATCT 60.755 60.000 0.00 0.00 0.00 2.75
2774 5590 0.753479 TCTCCTCACCTCGCCTGATC 60.753 60.000 0.00 0.00 0.00 2.92
2775 5591 0.105760 ATCTCCTCACCTCGCCTGAT 60.106 55.000 0.00 0.00 0.00 2.90
2776 5592 0.753479 GATCTCCTCACCTCGCCTGA 60.753 60.000 0.00 0.00 0.00 3.86
2777 5593 1.739049 GATCTCCTCACCTCGCCTG 59.261 63.158 0.00 0.00 0.00 4.85
2778 5594 1.826054 CGATCTCCTCACCTCGCCT 60.826 63.158 0.00 0.00 0.00 5.52
2779 5595 2.725008 CGATCTCCTCACCTCGCC 59.275 66.667 0.00 0.00 0.00 5.54
2781 5597 2.121538 TGGCGATCTCCTCACCTCG 61.122 63.158 2.88 0.00 0.00 4.63
2782 5598 1.040339 AGTGGCGATCTCCTCACCTC 61.040 60.000 2.88 0.00 0.00 3.85
2783 5599 1.000993 AGTGGCGATCTCCTCACCT 59.999 57.895 2.88 0.00 0.00 4.00
2784 5600 1.142748 CAGTGGCGATCTCCTCACC 59.857 63.158 2.88 0.00 0.00 4.02
2785 5601 0.179124 GTCAGTGGCGATCTCCTCAC 60.179 60.000 2.88 0.00 0.00 3.51
2786 5602 1.323271 GGTCAGTGGCGATCTCCTCA 61.323 60.000 2.88 0.00 0.00 3.86
2787 5603 1.323271 TGGTCAGTGGCGATCTCCTC 61.323 60.000 2.88 0.00 0.00 3.71
2788 5604 1.305297 TGGTCAGTGGCGATCTCCT 60.305 57.895 2.88 0.00 0.00 3.69
2789 5605 1.142748 CTGGTCAGTGGCGATCTCC 59.857 63.158 0.00 0.00 0.00 3.71
2790 5606 0.102120 CTCTGGTCAGTGGCGATCTC 59.898 60.000 0.00 0.00 0.00 2.75
2791 5607 1.954362 GCTCTGGTCAGTGGCGATCT 61.954 60.000 0.00 0.00 0.00 2.75
2792 5608 1.520342 GCTCTGGTCAGTGGCGATC 60.520 63.158 0.00 0.00 0.00 3.69
2793 5609 2.581354 GCTCTGGTCAGTGGCGAT 59.419 61.111 0.00 0.00 0.00 4.58
2794 5610 3.695606 GGCTCTGGTCAGTGGCGA 61.696 66.667 10.05 0.00 37.65 5.54
2796 5612 2.167398 TTACGGCTCTGGTCAGTGGC 62.167 60.000 14.06 14.06 41.98 5.01
2797 5613 0.320374 TTTACGGCTCTGGTCAGTGG 59.680 55.000 0.00 0.00 0.00 4.00
2798 5614 1.714794 CTTTACGGCTCTGGTCAGTG 58.285 55.000 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.