Multiple sequence alignment - TraesCS6B01G162200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G162200 chr6B 100.000 3680 0 0 1 3680 167031799 167028120 0.000000e+00 6796.0
1 TraesCS6B01G162200 chr6B 85.379 554 76 3 1 550 103265731 103266283 1.480000e-158 569.0
2 TraesCS6B01G162200 chr6B 88.761 436 41 5 6 433 119032514 119032079 9.050000e-146 527.0
3 TraesCS6B01G162200 chr6B 82.796 558 80 12 1 550 599726535 599727084 5.530000e-133 484.0
4 TraesCS6B01G162200 chr6B 90.385 52 4 1 3592 3642 676679969 676679918 2.370000e-07 67.6
5 TraesCS6B01G162200 chr6D 96.409 2395 54 13 608 2980 88502205 88504589 0.000000e+00 3917.0
6 TraesCS6B01G162200 chr6D 86.364 88 10 2 3595 3680 53543040 53542953 1.090000e-15 95.3
7 TraesCS6B01G162200 chr6A 94.686 2465 72 33 615 3033 106454855 106457306 0.000000e+00 3771.0
8 TraesCS6B01G162200 chr6A 88.496 113 11 2 3569 3680 106472391 106472502 6.410000e-28 135.0
9 TraesCS6B01G162200 chr3B 86.501 563 63 5 1 550 723473192 723472630 1.130000e-169 606.0
10 TraesCS6B01G162200 chr1B 85.610 549 69 6 1 539 598908916 598908368 5.330000e-158 568.0
11 TraesCS6B01G162200 chr1B 85.331 559 69 10 1 550 621995874 621995320 1.920000e-157 566.0
12 TraesCS6B01G162200 chr1B 85.165 546 70 6 1 539 498970056 498970597 1.930000e-152 549.0
13 TraesCS6B01G162200 chr1B 86.939 490 55 8 56 539 375785721 375785235 3.230000e-150 542.0
14 TraesCS6B01G162200 chr1B 88.608 79 8 1 3044 3122 535703968 535704045 1.090000e-15 95.3
15 TraesCS6B01G162200 chr1B 96.000 50 2 0 3401 3450 535704036 535704085 8.470000e-12 82.4
16 TraesCS6B01G162200 chr7B 85.496 524 62 11 1 511 626452681 626453203 5.410000e-148 534.0
17 TraesCS6B01G162200 chr2A 76.028 997 216 20 1580 2569 183550747 183551727 2.550000e-136 496.0
18 TraesCS6B01G162200 chr2A 75.120 1041 235 21 1580 2611 407740526 407739501 2.000000e-127 466.0
19 TraesCS6B01G162200 chr2A 72.340 235 59 6 1324 1555 183550320 183550551 6.590000e-08 69.4
20 TraesCS6B01G162200 chr2D 75.267 1031 233 19 1580 2602 323076889 323077905 4.300000e-129 472.0
21 TraesCS6B01G162200 chr2D 72.269 238 60 6 1324 1558 166609927 166609693 6.590000e-08 69.4
22 TraesCS6B01G162200 chr2B 74.685 1031 239 19 1580 2602 390925542 390926558 4.360000e-119 438.0
23 TraesCS6B01G162200 chr2B 91.636 275 2 2 1910 2184 794676785 794677038 9.720000e-96 361.0
24 TraesCS6B01G162200 chr2B 84.577 201 28 3 3195 3394 449846079 449845881 2.900000e-46 196.0
25 TraesCS6B01G162200 chr2B 89.873 79 7 1 3044 3122 691355473 691355396 2.340000e-17 100.0
26 TraesCS6B01G162200 chr2B 72.340 235 59 6 1324 1555 231233403 231233634 6.590000e-08 69.4
27 TraesCS6B01G162200 chr3A 85.354 198 27 2 3195 3391 168575494 168575298 1.730000e-48 204.0
28 TraesCS6B01G162200 chr3A 86.667 75 6 3 3606 3678 746959922 746959994 3.050000e-11 80.5
29 TraesCS6B01G162200 chr5B 84.286 210 29 4 3190 3396 667842982 667842774 6.230000e-48 202.0
30 TraesCS6B01G162200 chr5B 83.920 199 28 4 3195 3392 466687075 466687270 1.740000e-43 187.0
31 TraesCS6B01G162200 chr5A 84.500 200 29 2 3195 3393 575694575 575694773 2.900000e-46 196.0
32 TraesCS6B01G162200 chr5A 83.251 203 32 2 3190 3391 708633783 708633582 6.280000e-43 185.0
33 TraesCS6B01G162200 chr7D 84.158 202 28 4 3189 3387 575229899 575229699 3.750000e-45 193.0
34 TraesCS6B01G162200 chr7D 87.179 78 8 2 3595 3670 32024652 32024729 1.820000e-13 87.9
35 TraesCS6B01G162200 chr5D 83.500 200 31 2 3195 3393 15956917 15957115 6.280000e-43 185.0
36 TraesCS6B01G162200 chr3D 78.986 276 48 6 3121 3395 324304336 324304070 2.920000e-41 180.0
37 TraesCS6B01G162200 chr7A 80.233 86 12 4 3589 3671 32534890 32534807 3.970000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G162200 chr6B 167028120 167031799 3679 True 6796.0 6796 100.000 1 3680 1 chr6B.!!$R2 3679
1 TraesCS6B01G162200 chr6B 103265731 103266283 552 False 569.0 569 85.379 1 550 1 chr6B.!!$F1 549
2 TraesCS6B01G162200 chr6B 599726535 599727084 549 False 484.0 484 82.796 1 550 1 chr6B.!!$F2 549
3 TraesCS6B01G162200 chr6D 88502205 88504589 2384 False 3917.0 3917 96.409 608 2980 1 chr6D.!!$F1 2372
4 TraesCS6B01G162200 chr6A 106454855 106457306 2451 False 3771.0 3771 94.686 615 3033 1 chr6A.!!$F1 2418
5 TraesCS6B01G162200 chr3B 723472630 723473192 562 True 606.0 606 86.501 1 550 1 chr3B.!!$R1 549
6 TraesCS6B01G162200 chr1B 598908368 598908916 548 True 568.0 568 85.610 1 539 1 chr1B.!!$R2 538
7 TraesCS6B01G162200 chr1B 621995320 621995874 554 True 566.0 566 85.331 1 550 1 chr1B.!!$R3 549
8 TraesCS6B01G162200 chr1B 498970056 498970597 541 False 549.0 549 85.165 1 539 1 chr1B.!!$F1 538
9 TraesCS6B01G162200 chr7B 626452681 626453203 522 False 534.0 534 85.496 1 511 1 chr7B.!!$F1 510
10 TraesCS6B01G162200 chr2A 407739501 407740526 1025 True 466.0 466 75.120 1580 2611 1 chr2A.!!$R1 1031
11 TraesCS6B01G162200 chr2A 183550320 183551727 1407 False 282.7 496 74.184 1324 2569 2 chr2A.!!$F1 1245
12 TraesCS6B01G162200 chr2D 323076889 323077905 1016 False 472.0 472 75.267 1580 2602 1 chr2D.!!$F1 1022
13 TraesCS6B01G162200 chr2B 390925542 390926558 1016 False 438.0 438 74.685 1580 2602 1 chr2B.!!$F2 1022

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
598 618 0.109226 GCTCTAGACACGACACACCC 60.109 60.0 0.0 0.0 0.00 4.61 F
604 624 0.246635 GACACGACACACCCTAGCAT 59.753 55.0 0.0 0.0 0.00 3.79 F
1177 1217 0.454285 GTGCATGCACGCGTAATTGT 60.454 50.0 33.2 0.0 37.19 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1510 1554 2.124570 GCCGGTGATGAGCATGGT 60.125 61.111 1.9 0.0 0.00 3.55 R
2508 2726 2.224137 GGCGATGAAGATGGTCATGAGA 60.224 50.000 0.0 0.0 38.38 3.27 R
2766 3025 0.308993 GCTGGGTAATCATGAAGCGC 59.691 55.000 0.0 0.0 0.00 5.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
254 265 1.210931 CAAGGCCGACGACGTCTAA 59.789 57.895 24.36 0.00 37.88 2.10
261 272 1.211969 GACGACGTCTAAGGCAGCA 59.788 57.895 20.52 0.00 0.00 4.41
433 453 1.033746 CGCACATTTGGATCTGCCCT 61.034 55.000 0.00 0.00 34.97 5.19
442 462 0.181350 GGATCTGCCCTTCGTTGGAT 59.819 55.000 0.00 0.00 0.00 3.41
496 516 2.582498 GTTCGCCTGACCGATCCG 60.582 66.667 0.00 0.00 37.06 4.18
521 541 5.584442 ACGGACGAAAAGCAAATAAAAACT 58.416 33.333 0.00 0.00 0.00 2.66
533 553 5.723237 CAAATAAAAACTGTGTCCGTTTGC 58.277 37.500 0.00 0.00 35.00 3.68
550 570 2.442212 TGCATCGGTTCGTTGAAGTA 57.558 45.000 3.02 0.00 0.00 2.24
551 571 2.333926 TGCATCGGTTCGTTGAAGTAG 58.666 47.619 3.02 0.00 0.00 2.57
552 572 2.029739 TGCATCGGTTCGTTGAAGTAGA 60.030 45.455 3.02 0.00 0.00 2.59
553 573 2.599082 GCATCGGTTCGTTGAAGTAGAG 59.401 50.000 3.02 0.00 0.00 2.43
554 574 3.834610 CATCGGTTCGTTGAAGTAGAGT 58.165 45.455 0.00 0.00 0.00 3.24
555 575 4.673580 GCATCGGTTCGTTGAAGTAGAGTA 60.674 45.833 3.02 0.00 0.00 2.59
556 576 4.410492 TCGGTTCGTTGAAGTAGAGTAC 57.590 45.455 0.00 0.00 0.00 2.73
557 577 3.814842 TCGGTTCGTTGAAGTAGAGTACA 59.185 43.478 0.00 0.00 0.00 2.90
558 578 4.456911 TCGGTTCGTTGAAGTAGAGTACAT 59.543 41.667 0.00 0.00 0.00 2.29
559 579 4.792189 CGGTTCGTTGAAGTAGAGTACATC 59.208 45.833 0.00 0.00 0.00 3.06
560 580 5.391736 CGGTTCGTTGAAGTAGAGTACATCT 60.392 44.000 0.00 0.00 42.47 2.90
561 581 6.183360 CGGTTCGTTGAAGTAGAGTACATCTA 60.183 42.308 0.00 0.00 39.64 1.98
562 582 7.188157 GGTTCGTTGAAGTAGAGTACATCTAG 58.812 42.308 0.00 0.00 41.28 2.43
563 583 7.065563 GGTTCGTTGAAGTAGAGTACATCTAGA 59.934 40.741 0.00 0.00 41.28 2.43
564 584 8.614346 GTTCGTTGAAGTAGAGTACATCTAGAT 58.386 37.037 0.00 0.00 41.28 1.98
565 585 8.144155 TCGTTGAAGTAGAGTACATCTAGATG 57.856 38.462 27.63 27.63 41.28 2.90
593 613 2.437413 AGATGTGCTCTAGACACGACA 58.563 47.619 15.87 6.10 41.03 4.35
594 614 2.162608 AGATGTGCTCTAGACACGACAC 59.837 50.000 15.87 8.62 41.03 3.67
595 615 1.314730 TGTGCTCTAGACACGACACA 58.685 50.000 15.87 10.48 41.03 3.72
596 616 1.001706 TGTGCTCTAGACACGACACAC 60.002 52.381 15.87 0.00 41.03 3.82
597 617 0.596577 TGCTCTAGACACGACACACC 59.403 55.000 0.00 0.00 0.00 4.16
598 618 0.109226 GCTCTAGACACGACACACCC 60.109 60.000 0.00 0.00 0.00 4.61
599 619 1.535833 CTCTAGACACGACACACCCT 58.464 55.000 0.00 0.00 0.00 4.34
600 620 2.708051 CTCTAGACACGACACACCCTA 58.292 52.381 0.00 0.00 0.00 3.53
601 621 2.678836 CTCTAGACACGACACACCCTAG 59.321 54.545 0.00 0.00 0.00 3.02
602 622 1.132643 CTAGACACGACACACCCTAGC 59.867 57.143 0.00 0.00 0.00 3.42
603 623 0.826256 AGACACGACACACCCTAGCA 60.826 55.000 0.00 0.00 0.00 3.49
604 624 0.246635 GACACGACACACCCTAGCAT 59.753 55.000 0.00 0.00 0.00 3.79
605 625 0.246635 ACACGACACACCCTAGCATC 59.753 55.000 0.00 0.00 0.00 3.91
606 626 0.532573 CACGACACACCCTAGCATCT 59.467 55.000 0.00 0.00 0.00 2.90
630 650 3.089784 CGGAAATTGCGACCGGAG 58.910 61.111 9.46 2.13 42.48 4.63
631 651 1.740296 CGGAAATTGCGACCGGAGT 60.740 57.895 9.46 0.00 42.48 3.85
632 652 1.794222 GGAAATTGCGACCGGAGTG 59.206 57.895 9.46 0.00 0.00 3.51
633 653 1.644786 GGAAATTGCGACCGGAGTGG 61.645 60.000 9.46 0.00 46.41 4.00
634 654 0.672401 GAAATTGCGACCGGAGTGGA 60.672 55.000 9.46 0.00 42.00 4.02
635 655 0.673644 AAATTGCGACCGGAGTGGAG 60.674 55.000 9.46 0.00 42.00 3.86
644 664 3.469739 GACCGGAGTGGAGTTAAAAACA 58.530 45.455 9.46 0.00 42.00 2.83
663 685 3.480470 ACATTGGTCTCAACTGTGAAGG 58.520 45.455 0.00 0.00 35.48 3.46
687 709 1.541588 GGTTGACCATGAAACTGAGGC 59.458 52.381 0.00 0.00 35.64 4.70
926 953 3.429685 TACCCACCACCACCACCCT 62.430 63.158 0.00 0.00 0.00 4.34
1023 1050 4.856801 GGGGCCGTGATCGTGCAT 62.857 66.667 0.00 0.00 35.88 3.96
1177 1217 0.454285 GTGCATGCACGCGTAATTGT 60.454 50.000 33.20 0.00 37.19 2.71
1307 1351 1.202510 GGACATCTACCAGCAGCAGAG 60.203 57.143 0.00 0.00 0.00 3.35
1368 1412 1.985116 GGAGCTGTCCCTCTTCGGT 60.985 63.158 0.00 0.00 36.76 4.69
1596 1811 0.551396 TCTACCTCTCGGAGATGGCA 59.449 55.000 8.39 2.69 34.21 4.92
2685 2903 2.627221 GCTAGAGATGAGCTGATCCACA 59.373 50.000 9.77 0.00 36.96 4.17
2766 3025 3.362399 ATCGGTGCAGGCTGAGTCG 62.362 63.158 20.86 16.91 0.00 4.18
2772 3031 3.184683 CAGGCTGAGTCGCGCTTC 61.185 66.667 9.42 1.34 0.00 3.86
2994 3261 2.497675 ACAATCTCACTACATGGTCGCT 59.502 45.455 0.00 0.00 0.00 4.93
3024 3291 7.582352 CATGATCAATTGCTCAGTAACCATAG 58.418 38.462 16.38 0.00 0.00 2.23
3049 3316 4.566987 GGTTCTACCTTTCAGATGAACGT 58.433 43.478 0.00 0.00 35.88 3.99
3050 3317 4.389077 GGTTCTACCTTTCAGATGAACGTG 59.611 45.833 0.00 0.00 35.88 4.49
3051 3318 4.866508 TCTACCTTTCAGATGAACGTGT 57.133 40.909 0.00 0.00 33.13 4.49
3052 3319 5.209818 TCTACCTTTCAGATGAACGTGTT 57.790 39.130 0.00 0.00 33.13 3.32
3053 3320 4.988540 TCTACCTTTCAGATGAACGTGTTG 59.011 41.667 0.00 0.00 33.13 3.33
3054 3321 2.290641 ACCTTTCAGATGAACGTGTTGC 59.709 45.455 0.00 0.00 33.13 4.17
3055 3322 2.290367 CCTTTCAGATGAACGTGTTGCA 59.710 45.455 0.00 0.00 33.13 4.08
3056 3323 3.058016 CCTTTCAGATGAACGTGTTGCAT 60.058 43.478 0.00 0.00 33.13 3.96
3057 3324 3.541071 TTCAGATGAACGTGTTGCATG 57.459 42.857 0.00 0.00 0.00 4.06
3058 3325 1.805943 TCAGATGAACGTGTTGCATGG 59.194 47.619 0.00 0.00 0.00 3.66
3059 3326 1.536766 CAGATGAACGTGTTGCATGGT 59.463 47.619 0.00 0.00 0.00 3.55
3060 3327 1.806542 AGATGAACGTGTTGCATGGTC 59.193 47.619 0.00 0.00 37.58 4.02
3061 3328 1.806542 GATGAACGTGTTGCATGGTCT 59.193 47.619 7.73 0.00 37.89 3.85
3062 3329 0.943673 TGAACGTGTTGCATGGTCTG 59.056 50.000 7.73 0.00 37.89 3.51
3063 3330 1.225855 GAACGTGTTGCATGGTCTGA 58.774 50.000 0.00 0.00 34.57 3.27
3064 3331 1.806542 GAACGTGTTGCATGGTCTGAT 59.193 47.619 0.00 0.00 34.57 2.90
3065 3332 2.760634 ACGTGTTGCATGGTCTGATA 57.239 45.000 0.00 0.00 0.00 2.15
3066 3333 2.346803 ACGTGTTGCATGGTCTGATAC 58.653 47.619 0.00 0.00 0.00 2.24
3067 3334 2.289382 ACGTGTTGCATGGTCTGATACA 60.289 45.455 0.00 0.00 0.00 2.29
3068 3335 2.938451 CGTGTTGCATGGTCTGATACAT 59.062 45.455 0.00 0.00 0.00 2.29
3069 3336 3.242511 CGTGTTGCATGGTCTGATACATG 60.243 47.826 16.30 16.30 45.49 3.21
3075 3342 3.746940 CATGGTCTGATACATGCATGGA 58.253 45.455 29.41 23.41 38.15 3.41
3076 3343 4.332828 CATGGTCTGATACATGCATGGAT 58.667 43.478 24.76 24.76 38.15 3.41
3077 3344 3.746940 TGGTCTGATACATGCATGGATG 58.253 45.455 29.26 24.00 29.60 3.51
3089 3356 2.251409 CATGGATGCCGATGACTTCT 57.749 50.000 0.00 0.00 0.00 2.85
3090 3357 1.871676 CATGGATGCCGATGACTTCTG 59.128 52.381 0.00 0.00 0.00 3.02
3091 3358 0.904649 TGGATGCCGATGACTTCTGT 59.095 50.000 0.00 0.00 0.00 3.41
3092 3359 1.278985 TGGATGCCGATGACTTCTGTT 59.721 47.619 0.00 0.00 0.00 3.16
3093 3360 2.290260 TGGATGCCGATGACTTCTGTTT 60.290 45.455 0.00 0.00 0.00 2.83
3094 3361 2.749621 GGATGCCGATGACTTCTGTTTT 59.250 45.455 0.00 0.00 0.00 2.43
3095 3362 3.181506 GGATGCCGATGACTTCTGTTTTC 60.182 47.826 0.00 0.00 0.00 2.29
3096 3363 2.844946 TGCCGATGACTTCTGTTTTCA 58.155 42.857 0.00 0.00 0.00 2.69
3098 3365 2.808543 GCCGATGACTTCTGTTTTCAGT 59.191 45.455 0.00 0.00 46.98 3.41
3099 3366 3.251004 GCCGATGACTTCTGTTTTCAGTT 59.749 43.478 0.00 0.00 46.98 3.16
3100 3367 4.261197 GCCGATGACTTCTGTTTTCAGTTT 60.261 41.667 0.00 0.00 46.98 2.66
3101 3368 5.733373 GCCGATGACTTCTGTTTTCAGTTTT 60.733 40.000 0.00 0.00 46.98 2.43
3102 3369 6.265577 CCGATGACTTCTGTTTTCAGTTTTT 58.734 36.000 0.00 0.00 46.98 1.94
3103 3370 6.197096 CCGATGACTTCTGTTTTCAGTTTTTG 59.803 38.462 0.00 0.00 46.98 2.44
3104 3371 6.291269 CGATGACTTCTGTTTTCAGTTTTTGC 60.291 38.462 0.00 0.00 46.98 3.68
3105 3372 5.777802 TGACTTCTGTTTTCAGTTTTTGCA 58.222 33.333 0.00 0.00 46.98 4.08
3106 3373 6.397272 TGACTTCTGTTTTCAGTTTTTGCAT 58.603 32.000 0.00 0.00 46.98 3.96
3107 3374 6.531240 TGACTTCTGTTTTCAGTTTTTGCATC 59.469 34.615 0.00 0.00 46.98 3.91
3108 3375 6.397272 ACTTCTGTTTTCAGTTTTTGCATCA 58.603 32.000 0.00 0.00 46.98 3.07
3109 3376 6.311200 ACTTCTGTTTTCAGTTTTTGCATCAC 59.689 34.615 0.00 0.00 46.98 3.06
3110 3377 4.797868 TCTGTTTTCAGTTTTTGCATCACG 59.202 37.500 0.00 0.00 46.98 4.35
3111 3378 4.489810 TGTTTTCAGTTTTTGCATCACGT 58.510 34.783 0.00 0.00 0.00 4.49
3112 3379 4.325741 TGTTTTCAGTTTTTGCATCACGTG 59.674 37.500 9.94 9.94 0.00 4.49
3113 3380 8.807610 CTGTTTTCAGTTTTTGCATCACGTGC 62.808 42.308 11.67 0.00 46.72 5.34
3146 3413 7.439204 TTTTTAACACATTACAGACGCAAAC 57.561 32.000 0.00 0.00 0.00 2.93
3147 3414 5.736486 TTAACACATTACAGACGCAAACA 57.264 34.783 0.00 0.00 0.00 2.83
3148 3415 3.602390 ACACATTACAGACGCAAACAC 57.398 42.857 0.00 0.00 0.00 3.32
3149 3416 3.202906 ACACATTACAGACGCAAACACT 58.797 40.909 0.00 0.00 0.00 3.55
3150 3417 3.247648 ACACATTACAGACGCAAACACTC 59.752 43.478 0.00 0.00 0.00 3.51
3151 3418 3.247411 CACATTACAGACGCAAACACTCA 59.753 43.478 0.00 0.00 0.00 3.41
3152 3419 4.065088 ACATTACAGACGCAAACACTCAT 58.935 39.130 0.00 0.00 0.00 2.90
3153 3420 5.120053 CACATTACAGACGCAAACACTCATA 59.880 40.000 0.00 0.00 0.00 2.15
3154 3421 5.874810 ACATTACAGACGCAAACACTCATAT 59.125 36.000 0.00 0.00 0.00 1.78
3155 3422 7.010091 CACATTACAGACGCAAACACTCATATA 59.990 37.037 0.00 0.00 0.00 0.86
3156 3423 7.710907 ACATTACAGACGCAAACACTCATATAT 59.289 33.333 0.00 0.00 0.00 0.86
3157 3424 9.191995 CATTACAGACGCAAACACTCATATATA 57.808 33.333 0.00 0.00 0.00 0.86
3158 3425 8.570096 TTACAGACGCAAACACTCATATATAC 57.430 34.615 0.00 0.00 0.00 1.47
3159 3426 5.685954 ACAGACGCAAACACTCATATATACG 59.314 40.000 0.00 0.00 0.00 3.06
3160 3427 5.685954 CAGACGCAAACACTCATATATACGT 59.314 40.000 0.00 0.00 0.00 3.57
3161 3428 5.685954 AGACGCAAACACTCATATATACGTG 59.314 40.000 0.00 10.44 0.00 4.49
3162 3429 4.208460 ACGCAAACACTCATATATACGTGC 59.792 41.667 0.00 0.00 0.00 5.34
3163 3430 4.208253 CGCAAACACTCATATATACGTGCA 59.792 41.667 0.00 0.00 0.00 4.57
3164 3431 5.107491 CGCAAACACTCATATATACGTGCAT 60.107 40.000 0.00 0.00 0.00 3.96
3165 3432 6.088883 CGCAAACACTCATATATACGTGCATA 59.911 38.462 0.00 0.00 0.00 3.14
3166 3433 7.227461 GCAAACACTCATATATACGTGCATAC 58.773 38.462 0.00 0.00 0.00 2.39
3167 3434 7.095816 GCAAACACTCATATATACGTGCATACA 60.096 37.037 0.00 0.00 0.00 2.29
3168 3435 8.760569 CAAACACTCATATATACGTGCATACAA 58.239 33.333 0.00 0.00 0.00 2.41
3169 3436 9.489084 AAACACTCATATATACGTGCATACAAT 57.511 29.630 0.00 0.00 0.00 2.71
3170 3437 8.689251 ACACTCATATATACGTGCATACAATC 57.311 34.615 0.00 0.00 0.00 2.67
3171 3438 8.303876 ACACTCATATATACGTGCATACAATCA 58.696 33.333 0.00 0.00 0.00 2.57
3172 3439 8.587111 CACTCATATATACGTGCATACAATCAC 58.413 37.037 0.00 0.00 0.00 3.06
3173 3440 7.759886 ACTCATATATACGTGCATACAATCACC 59.240 37.037 0.00 0.00 0.00 4.02
3174 3441 7.039270 TCATATATACGTGCATACAATCACCC 58.961 38.462 0.00 0.00 0.00 4.61
3175 3442 3.552132 ATACGTGCATACAATCACCCA 57.448 42.857 0.00 0.00 0.00 4.51
3176 3443 2.418368 ACGTGCATACAATCACCCAT 57.582 45.000 0.00 0.00 0.00 4.00
3177 3444 3.552132 ACGTGCATACAATCACCCATA 57.448 42.857 0.00 0.00 0.00 2.74
3178 3445 4.085357 ACGTGCATACAATCACCCATAT 57.915 40.909 0.00 0.00 0.00 1.78
3179 3446 3.814842 ACGTGCATACAATCACCCATATG 59.185 43.478 0.00 0.00 0.00 1.78
3180 3447 4.064388 CGTGCATACAATCACCCATATGA 58.936 43.478 3.65 0.00 0.00 2.15
3181 3448 4.514816 CGTGCATACAATCACCCATATGAA 59.485 41.667 3.65 0.00 30.82 2.57
3182 3449 5.560760 CGTGCATACAATCACCCATATGAAC 60.561 44.000 3.65 0.00 32.33 3.18
3183 3450 5.299028 GTGCATACAATCACCCATATGAACA 59.701 40.000 3.65 0.00 34.78 3.18
3184 3451 5.299028 TGCATACAATCACCCATATGAACAC 59.701 40.000 3.65 0.00 30.82 3.32
3185 3452 5.299028 GCATACAATCACCCATATGAACACA 59.701 40.000 3.65 0.00 30.82 3.72
3186 3453 6.728200 CATACAATCACCCATATGAACACAC 58.272 40.000 3.65 0.00 30.82 3.82
3187 3454 4.661222 ACAATCACCCATATGAACACACA 58.339 39.130 3.65 0.00 30.82 3.72
3188 3455 5.263599 ACAATCACCCATATGAACACACAT 58.736 37.500 3.65 0.00 30.82 3.21
3189 3456 5.125900 ACAATCACCCATATGAACACACATG 59.874 40.000 3.65 0.00 30.82 3.21
3190 3457 4.566426 TCACCCATATGAACACACATGA 57.434 40.909 3.65 0.00 0.00 3.07
3191 3458 4.516323 TCACCCATATGAACACACATGAG 58.484 43.478 3.65 0.00 0.00 2.90
3192 3459 4.224818 TCACCCATATGAACACACATGAGA 59.775 41.667 3.65 0.00 0.00 3.27
3193 3460 4.943093 CACCCATATGAACACACATGAGAA 59.057 41.667 3.65 0.00 0.00 2.87
3194 3461 5.415389 CACCCATATGAACACACATGAGAAA 59.585 40.000 3.65 0.00 0.00 2.52
3195 3462 5.415701 ACCCATATGAACACACATGAGAAAC 59.584 40.000 3.65 0.00 0.00 2.78
3196 3463 5.649395 CCCATATGAACACACATGAGAAACT 59.351 40.000 3.65 0.00 0.00 2.66
3197 3464 6.403964 CCCATATGAACACACATGAGAAACTG 60.404 42.308 3.65 0.00 0.00 3.16
3198 3465 6.372381 CCATATGAACACACATGAGAAACTGA 59.628 38.462 3.65 0.00 0.00 3.41
3199 3466 5.936686 ATGAACACACATGAGAAACTGAG 57.063 39.130 0.00 0.00 0.00 3.35
3200 3467 3.561310 TGAACACACATGAGAAACTGAGC 59.439 43.478 0.00 0.00 0.00 4.26
3201 3468 3.482156 ACACACATGAGAAACTGAGCT 57.518 42.857 0.00 0.00 0.00 4.09
3202 3469 3.813443 ACACACATGAGAAACTGAGCTT 58.187 40.909 0.00 0.00 0.00 3.74
3203 3470 4.202441 ACACACATGAGAAACTGAGCTTT 58.798 39.130 0.00 0.00 0.00 3.51
3204 3471 4.274459 ACACACATGAGAAACTGAGCTTTC 59.726 41.667 0.00 0.00 0.00 2.62
3205 3472 4.274214 CACACATGAGAAACTGAGCTTTCA 59.726 41.667 0.00 0.00 33.26 2.69
3206 3473 5.048921 CACACATGAGAAACTGAGCTTTCAT 60.049 40.000 0.00 0.00 33.26 2.57
3207 3474 6.148315 CACACATGAGAAACTGAGCTTTCATA 59.852 38.462 0.00 0.94 33.26 2.15
3208 3475 6.883217 ACACATGAGAAACTGAGCTTTCATAT 59.117 34.615 0.00 2.62 33.26 1.78
3209 3476 7.065563 ACACATGAGAAACTGAGCTTTCATATC 59.934 37.037 0.00 1.74 33.26 1.63
3210 3477 7.065443 CACATGAGAAACTGAGCTTTCATATCA 59.935 37.037 0.00 5.79 33.26 2.15
3211 3478 7.774157 ACATGAGAAACTGAGCTTTCATATCAT 59.226 33.333 0.00 7.23 33.26 2.45
3212 3479 7.783090 TGAGAAACTGAGCTTTCATATCATC 57.217 36.000 9.16 0.75 33.26 2.92
3213 3480 7.563020 TGAGAAACTGAGCTTTCATATCATCT 58.437 34.615 9.16 0.00 33.26 2.90
3214 3481 8.045507 TGAGAAACTGAGCTTTCATATCATCTT 58.954 33.333 9.16 0.00 33.26 2.40
3215 3482 8.211116 AGAAACTGAGCTTTCATATCATCTTG 57.789 34.615 9.16 0.00 33.26 3.02
3216 3483 8.045507 AGAAACTGAGCTTTCATATCATCTTGA 58.954 33.333 9.16 0.00 33.26 3.02
3217 3484 7.789273 AACTGAGCTTTCATATCATCTTGAG 57.211 36.000 0.00 0.00 0.00 3.02
3218 3485 7.122138 ACTGAGCTTTCATATCATCTTGAGA 57.878 36.000 0.00 0.00 0.00 3.27
3219 3486 7.737869 ACTGAGCTTTCATATCATCTTGAGAT 58.262 34.615 0.00 0.00 34.56 2.75
3220 3487 8.212312 ACTGAGCTTTCATATCATCTTGAGATT 58.788 33.333 0.00 0.00 31.21 2.40
3221 3488 8.975663 TGAGCTTTCATATCATCTTGAGATTT 57.024 30.769 0.00 0.00 31.21 2.17
3222 3489 9.404848 TGAGCTTTCATATCATCTTGAGATTTT 57.595 29.630 0.00 0.00 31.21 1.82
3225 3492 9.591404 GCTTTCATATCATCTTGAGATTTTACG 57.409 33.333 0.00 0.00 31.21 3.18
3232 3499 7.757097 TCATCTTGAGATTTTACGAAGTAGC 57.243 36.000 0.00 0.00 37.14 3.58
3233 3500 6.757010 TCATCTTGAGATTTTACGAAGTAGCC 59.243 38.462 0.00 0.00 37.14 3.93
3234 3501 5.100259 TCTTGAGATTTTACGAAGTAGCCG 58.900 41.667 0.00 0.00 46.93 5.52
3235 3502 4.445452 TGAGATTTTACGAAGTAGCCGT 57.555 40.909 0.00 0.00 46.93 5.68
3236 3503 5.565592 TGAGATTTTACGAAGTAGCCGTA 57.434 39.130 0.00 0.00 46.93 4.02
3237 3504 5.575957 TGAGATTTTACGAAGTAGCCGTAG 58.424 41.667 0.00 0.00 46.93 3.51
3249 3516 3.915575 CCGTAGGCACCTCGTAGT 58.084 61.111 0.00 0.00 46.14 2.73
3250 3517 1.726265 CCGTAGGCACCTCGTAGTC 59.274 63.158 0.00 0.00 46.14 2.59
3251 3518 1.351012 CGTAGGCACCTCGTAGTCG 59.649 63.158 0.00 0.00 38.55 4.18
3252 3519 1.086067 CGTAGGCACCTCGTAGTCGA 61.086 60.000 0.00 0.00 44.12 4.20
3253 3520 0.376502 GTAGGCACCTCGTAGTCGAC 59.623 60.000 7.70 7.70 41.35 4.20
3271 3538 2.979649 GGGGACGTCTCCTTCCAC 59.020 66.667 27.83 0.17 36.68 4.02
3272 3539 1.609794 GGGGACGTCTCCTTCCACT 60.610 63.158 27.83 0.00 36.68 4.00
3273 3540 1.592223 GGGACGTCTCCTTCCACTG 59.408 63.158 16.46 0.00 36.68 3.66
3274 3541 0.898789 GGGACGTCTCCTTCCACTGA 60.899 60.000 16.46 0.00 36.68 3.41
3275 3542 0.966920 GGACGTCTCCTTCCACTGAA 59.033 55.000 16.46 0.00 33.07 3.02
3276 3543 1.336980 GGACGTCTCCTTCCACTGAAC 60.337 57.143 16.46 0.00 33.07 3.18
3277 3544 1.340248 GACGTCTCCTTCCACTGAACA 59.660 52.381 8.70 0.00 0.00 3.18
3278 3545 1.971357 ACGTCTCCTTCCACTGAACAT 59.029 47.619 0.00 0.00 0.00 2.71
3279 3546 2.289072 ACGTCTCCTTCCACTGAACATG 60.289 50.000 0.00 0.00 0.00 3.21
3280 3547 2.289072 CGTCTCCTTCCACTGAACATGT 60.289 50.000 0.00 0.00 0.00 3.21
3281 3548 3.056821 CGTCTCCTTCCACTGAACATGTA 60.057 47.826 0.00 0.00 0.00 2.29
3282 3549 4.246458 GTCTCCTTCCACTGAACATGTAC 58.754 47.826 0.00 0.00 0.00 2.90
3283 3550 3.260884 TCTCCTTCCACTGAACATGTACC 59.739 47.826 0.00 0.00 0.00 3.34
3284 3551 2.976185 TCCTTCCACTGAACATGTACCA 59.024 45.455 0.00 0.00 0.00 3.25
3285 3552 3.074412 CCTTCCACTGAACATGTACCAC 58.926 50.000 0.00 0.00 0.00 4.16
3286 3553 3.244561 CCTTCCACTGAACATGTACCACT 60.245 47.826 0.00 0.00 0.00 4.00
3287 3554 3.401033 TCCACTGAACATGTACCACTG 57.599 47.619 0.00 0.33 0.00 3.66
3288 3555 2.969262 TCCACTGAACATGTACCACTGA 59.031 45.455 0.00 0.00 0.00 3.41
3289 3556 3.389656 TCCACTGAACATGTACCACTGAA 59.610 43.478 0.00 0.00 0.00 3.02
3290 3557 4.133820 CCACTGAACATGTACCACTGAAA 58.866 43.478 0.00 0.00 0.00 2.69
3291 3558 4.578516 CCACTGAACATGTACCACTGAAAA 59.421 41.667 0.00 0.00 0.00 2.29
3292 3559 5.241506 CCACTGAACATGTACCACTGAAAAT 59.758 40.000 0.00 0.00 0.00 1.82
3293 3560 6.373779 CACTGAACATGTACCACTGAAAATC 58.626 40.000 0.00 0.00 0.00 2.17
3294 3561 5.473504 ACTGAACATGTACCACTGAAAATCC 59.526 40.000 0.00 0.00 0.00 3.01
3295 3562 5.630121 TGAACATGTACCACTGAAAATCCT 58.370 37.500 0.00 0.00 0.00 3.24
3296 3563 5.473162 TGAACATGTACCACTGAAAATCCTG 59.527 40.000 0.00 0.00 0.00 3.86
3297 3564 5.241403 ACATGTACCACTGAAAATCCTGA 57.759 39.130 0.00 0.00 0.00 3.86
3298 3565 5.630121 ACATGTACCACTGAAAATCCTGAA 58.370 37.500 0.00 0.00 0.00 3.02
3299 3566 6.068010 ACATGTACCACTGAAAATCCTGAAA 58.932 36.000 0.00 0.00 0.00 2.69
3300 3567 6.721208 ACATGTACCACTGAAAATCCTGAAAT 59.279 34.615 0.00 0.00 0.00 2.17
3301 3568 7.888021 ACATGTACCACTGAAAATCCTGAAATA 59.112 33.333 0.00 0.00 0.00 1.40
3302 3569 8.739039 CATGTACCACTGAAAATCCTGAAATAA 58.261 33.333 0.00 0.00 0.00 1.40
3303 3570 8.698973 TGTACCACTGAAAATCCTGAAATAAA 57.301 30.769 0.00 0.00 0.00 1.40
3304 3571 9.308000 TGTACCACTGAAAATCCTGAAATAAAT 57.692 29.630 0.00 0.00 0.00 1.40
3305 3572 9.788960 GTACCACTGAAAATCCTGAAATAAATC 57.211 33.333 0.00 0.00 0.00 2.17
3306 3573 7.840931 ACCACTGAAAATCCTGAAATAAATCC 58.159 34.615 0.00 0.00 0.00 3.01
3307 3574 7.454380 ACCACTGAAAATCCTGAAATAAATCCA 59.546 33.333 0.00 0.00 0.00 3.41
3308 3575 7.977853 CCACTGAAAATCCTGAAATAAATCCAG 59.022 37.037 0.00 0.00 0.00 3.86
3309 3576 7.977853 CACTGAAAATCCTGAAATAAATCCAGG 59.022 37.037 0.00 0.00 46.64 4.45
3330 3597 5.424121 GGATAAATCCGAACACCAGAATG 57.576 43.478 0.00 0.00 37.19 2.67
3331 3598 4.881850 GGATAAATCCGAACACCAGAATGT 59.118 41.667 0.00 0.00 37.19 2.71
3332 3599 5.220854 GGATAAATCCGAACACCAGAATGTG 60.221 44.000 0.00 0.00 38.51 3.21
3333 3600 3.417069 AATCCGAACACCAGAATGTGA 57.583 42.857 0.00 0.00 39.57 3.58
3334 3601 2.920724 TCCGAACACCAGAATGTGAA 57.079 45.000 0.00 0.00 39.57 3.18
3335 3602 3.201353 TCCGAACACCAGAATGTGAAA 57.799 42.857 0.00 0.00 39.57 2.69
3336 3603 2.875933 TCCGAACACCAGAATGTGAAAC 59.124 45.455 0.00 0.00 39.57 2.78
3337 3604 2.031157 CCGAACACCAGAATGTGAAACC 60.031 50.000 0.00 0.00 39.57 3.27
3338 3605 2.878406 CGAACACCAGAATGTGAAACCT 59.122 45.455 0.00 0.00 39.57 3.50
3339 3606 3.303990 CGAACACCAGAATGTGAAACCTG 60.304 47.826 0.00 0.00 39.57 4.00
3340 3607 3.576078 ACACCAGAATGTGAAACCTGA 57.424 42.857 0.00 0.00 39.57 3.86
3341 3608 4.104383 ACACCAGAATGTGAAACCTGAT 57.896 40.909 0.00 0.00 39.57 2.90
3342 3609 3.822735 ACACCAGAATGTGAAACCTGATG 59.177 43.478 0.00 0.00 39.57 3.07
3343 3610 3.192001 CACCAGAATGTGAAACCTGATGG 59.808 47.826 0.00 0.00 38.55 3.51
3344 3611 2.756760 CCAGAATGTGAAACCTGATGGG 59.243 50.000 0.00 0.00 41.89 4.00
3345 3612 2.165030 CAGAATGTGAAACCTGATGGGC 59.835 50.000 0.00 0.00 39.10 5.36
3346 3613 2.042162 AGAATGTGAAACCTGATGGGCT 59.958 45.455 0.00 0.00 39.10 5.19
3347 3614 1.843368 ATGTGAAACCTGATGGGCTG 58.157 50.000 0.00 0.00 39.10 4.85
3348 3615 0.251297 TGTGAAACCTGATGGGCTGG 60.251 55.000 0.00 0.00 41.12 4.85
3350 3617 0.251297 TGAAACCTGATGGGCTGGTG 60.251 55.000 0.00 0.00 46.85 4.17
3351 3618 0.038166 GAAACCTGATGGGCTGGTGA 59.962 55.000 0.00 0.00 46.85 4.02
3352 3619 0.038744 AAACCTGATGGGCTGGTGAG 59.961 55.000 0.00 0.00 46.85 3.51
3353 3620 0.842030 AACCTGATGGGCTGGTGAGA 60.842 55.000 0.00 0.00 46.85 3.27
3354 3621 1.222936 CCTGATGGGCTGGTGAGAC 59.777 63.158 0.00 0.00 0.00 3.36
3355 3622 1.556373 CCTGATGGGCTGGTGAGACA 61.556 60.000 0.00 0.00 0.00 3.41
3356 3623 0.325933 CTGATGGGCTGGTGAGACAA 59.674 55.000 0.00 0.00 0.00 3.18
3357 3624 0.036732 TGATGGGCTGGTGAGACAAC 59.963 55.000 0.00 0.00 0.00 3.32
3358 3625 0.326264 GATGGGCTGGTGAGACAACT 59.674 55.000 0.00 0.00 0.00 3.16
3359 3626 0.037303 ATGGGCTGGTGAGACAACTG 59.963 55.000 0.00 0.00 0.00 3.16
3360 3627 1.344953 TGGGCTGGTGAGACAACTGT 61.345 55.000 0.00 0.00 0.00 3.55
3361 3628 0.603975 GGGCTGGTGAGACAACTGTC 60.604 60.000 1.40 1.40 45.08 3.51
3362 3629 0.603975 GGCTGGTGAGACAACTGTCC 60.604 60.000 6.23 0.00 45.85 4.02
3363 3630 0.394565 GCTGGTGAGACAACTGTCCT 59.605 55.000 6.23 0.00 45.85 3.85
3364 3631 1.202698 GCTGGTGAGACAACTGTCCTT 60.203 52.381 6.23 0.00 45.85 3.36
3365 3632 2.760374 CTGGTGAGACAACTGTCCTTC 58.240 52.381 6.23 0.00 45.85 3.46
3366 3633 2.366916 CTGGTGAGACAACTGTCCTTCT 59.633 50.000 6.23 0.00 45.85 2.85
3367 3634 3.572642 TGGTGAGACAACTGTCCTTCTA 58.427 45.455 6.23 0.00 45.85 2.10
3368 3635 3.964688 TGGTGAGACAACTGTCCTTCTAA 59.035 43.478 6.23 0.00 45.85 2.10
3369 3636 4.202223 TGGTGAGACAACTGTCCTTCTAAC 60.202 45.833 6.23 0.00 45.85 2.34
3370 3637 4.308265 GTGAGACAACTGTCCTTCTAACC 58.692 47.826 6.23 0.00 45.85 2.85
3371 3638 3.964688 TGAGACAACTGTCCTTCTAACCA 59.035 43.478 6.23 0.00 45.85 3.67
3372 3639 4.593206 TGAGACAACTGTCCTTCTAACCAT 59.407 41.667 6.23 0.00 45.85 3.55
3373 3640 5.153950 AGACAACTGTCCTTCTAACCATC 57.846 43.478 6.23 0.00 45.85 3.51
3374 3641 4.020128 AGACAACTGTCCTTCTAACCATCC 60.020 45.833 6.23 0.00 45.85 3.51
3375 3642 3.650942 ACAACTGTCCTTCTAACCATCCA 59.349 43.478 0.00 0.00 0.00 3.41
3376 3643 4.104102 ACAACTGTCCTTCTAACCATCCAA 59.896 41.667 0.00 0.00 0.00 3.53
3377 3644 4.287766 ACTGTCCTTCTAACCATCCAAC 57.712 45.455 0.00 0.00 0.00 3.77
3378 3645 3.009143 ACTGTCCTTCTAACCATCCAACC 59.991 47.826 0.00 0.00 0.00 3.77
3379 3646 2.983192 TGTCCTTCTAACCATCCAACCA 59.017 45.455 0.00 0.00 0.00 3.67
3380 3647 3.244770 TGTCCTTCTAACCATCCAACCAC 60.245 47.826 0.00 0.00 0.00 4.16
3381 3648 2.983192 TCCTTCTAACCATCCAACCACA 59.017 45.455 0.00 0.00 0.00 4.17
3382 3649 3.591527 TCCTTCTAACCATCCAACCACAT 59.408 43.478 0.00 0.00 0.00 3.21
3383 3650 3.696051 CCTTCTAACCATCCAACCACATG 59.304 47.826 0.00 0.00 0.00 3.21
3384 3651 4.335416 CTTCTAACCATCCAACCACATGT 58.665 43.478 0.00 0.00 0.00 3.21
3385 3652 4.380843 TCTAACCATCCAACCACATGTT 57.619 40.909 0.00 0.00 37.80 2.71
3397 3664 3.287312 CCACATGTTGGTTCACATCAC 57.713 47.619 0.00 0.00 41.10 3.06
3398 3665 2.622470 CCACATGTTGGTTCACATCACA 59.378 45.455 0.00 0.00 41.10 3.58
3399 3666 3.067883 CCACATGTTGGTTCACATCACAA 59.932 43.478 0.00 0.00 41.10 3.33
3400 3667 4.292599 CACATGTTGGTTCACATCACAAG 58.707 43.478 0.00 0.00 35.03 3.16
3401 3668 3.243501 ACATGTTGGTTCACATCACAAGC 60.244 43.478 0.00 0.00 35.03 4.01
3402 3669 2.373224 TGTTGGTTCACATCACAAGCA 58.627 42.857 0.00 0.00 0.00 3.91
3403 3670 2.957680 TGTTGGTTCACATCACAAGCAT 59.042 40.909 0.00 0.00 30.45 3.79
3404 3671 3.243468 TGTTGGTTCACATCACAAGCATG 60.243 43.478 0.00 0.00 30.45 4.06
3405 3672 2.585330 TGGTTCACATCACAAGCATGT 58.415 42.857 0.00 0.00 41.61 3.21
3406 3673 3.749226 TGGTTCACATCACAAGCATGTA 58.251 40.909 0.00 0.00 37.82 2.29
3407 3674 3.752747 TGGTTCACATCACAAGCATGTAG 59.247 43.478 0.00 0.00 37.82 2.74
3408 3675 3.753272 GGTTCACATCACAAGCATGTAGT 59.247 43.478 0.00 0.00 37.82 2.73
3409 3676 4.216257 GGTTCACATCACAAGCATGTAGTT 59.784 41.667 0.00 0.00 37.82 2.24
3410 3677 5.149273 GTTCACATCACAAGCATGTAGTTG 58.851 41.667 0.00 0.00 37.82 3.16
3411 3678 4.640364 TCACATCACAAGCATGTAGTTGA 58.360 39.130 10.42 2.56 37.82 3.18
3412 3679 5.247862 TCACATCACAAGCATGTAGTTGAT 58.752 37.500 10.42 4.50 37.82 2.57
3413 3680 5.122711 TCACATCACAAGCATGTAGTTGATG 59.877 40.000 19.43 19.43 39.92 3.07
3414 3681 5.122711 CACATCACAAGCATGTAGTTGATGA 59.877 40.000 24.21 16.69 37.97 2.92
3415 3682 5.706833 ACATCACAAGCATGTAGTTGATGAA 59.293 36.000 24.21 6.21 37.97 2.57
3416 3683 5.611796 TCACAAGCATGTAGTTGATGAAC 57.388 39.130 10.42 0.00 37.82 3.18
3417 3684 5.062528 TCACAAGCATGTAGTTGATGAACA 58.937 37.500 10.42 0.00 37.82 3.18
3418 3685 5.706833 TCACAAGCATGTAGTTGATGAACAT 59.293 36.000 10.42 0.00 37.82 2.71
3425 3692 7.018635 CATGTAGTTGATGAACATGTATGCA 57.981 36.000 0.00 0.00 43.45 3.96
3426 3693 7.645402 CATGTAGTTGATGAACATGTATGCAT 58.355 34.615 3.79 3.79 43.45 3.96
3436 3703 3.150458 CATGTATGCATGGATGGGTCT 57.850 47.619 15.36 0.00 46.47 3.85
3437 3704 2.936919 TGTATGCATGGATGGGTCTC 57.063 50.000 10.16 0.00 0.00 3.36
3438 3705 2.126057 TGTATGCATGGATGGGTCTCA 58.874 47.619 10.16 0.00 0.00 3.27
3439 3706 2.712627 TGTATGCATGGATGGGTCTCAT 59.287 45.455 10.16 0.00 39.13 2.90
3440 3707 2.287977 ATGCATGGATGGGTCTCATG 57.712 50.000 0.00 0.00 40.66 3.07
3441 3708 0.921166 TGCATGGATGGGTCTCATGT 59.079 50.000 0.00 0.00 40.07 3.21
3442 3709 1.315690 GCATGGATGGGTCTCATGTG 58.684 55.000 0.00 0.00 40.07 3.21
3443 3710 1.315690 CATGGATGGGTCTCATGTGC 58.684 55.000 0.00 0.00 35.97 4.57
3444 3711 0.921166 ATGGATGGGTCTCATGTGCA 59.079 50.000 0.00 0.00 35.97 4.57
3445 3712 0.921166 TGGATGGGTCTCATGTGCAT 59.079 50.000 0.00 0.00 35.97 3.96
3446 3713 1.315690 GGATGGGTCTCATGTGCATG 58.684 55.000 5.86 5.86 40.09 4.06
3447 3714 1.409241 GGATGGGTCTCATGTGCATGT 60.409 52.381 11.38 0.00 39.72 3.21
3448 3715 1.945394 GATGGGTCTCATGTGCATGTC 59.055 52.381 11.38 4.75 39.72 3.06
3449 3716 0.035152 TGGGTCTCATGTGCATGTCC 60.035 55.000 11.38 11.59 39.72 4.02
3450 3717 0.254178 GGGTCTCATGTGCATGTCCT 59.746 55.000 11.38 0.00 39.72 3.85
3451 3718 1.376543 GGTCTCATGTGCATGTCCTG 58.623 55.000 11.38 2.72 39.72 3.86
3452 3719 1.065926 GGTCTCATGTGCATGTCCTGA 60.066 52.381 11.38 4.62 39.72 3.86
3453 3720 2.616256 GGTCTCATGTGCATGTCCTGAA 60.616 50.000 11.38 0.00 39.72 3.02
3454 3721 3.276857 GTCTCATGTGCATGTCCTGAAT 58.723 45.455 11.38 0.00 39.72 2.57
3455 3722 3.064958 GTCTCATGTGCATGTCCTGAATG 59.935 47.826 11.38 0.00 39.72 2.67
3456 3723 3.054948 TCTCATGTGCATGTCCTGAATGA 60.055 43.478 11.38 0.00 39.72 2.57
3457 3724 3.688235 TCATGTGCATGTCCTGAATGAA 58.312 40.909 11.38 0.00 39.72 2.57
3458 3725 4.274978 TCATGTGCATGTCCTGAATGAAT 58.725 39.130 11.38 0.00 39.72 2.57
3459 3726 4.707934 TCATGTGCATGTCCTGAATGAATT 59.292 37.500 11.38 0.00 39.72 2.17
3460 3727 4.443913 TGTGCATGTCCTGAATGAATTG 57.556 40.909 0.00 0.00 0.00 2.32
3461 3728 4.080687 TGTGCATGTCCTGAATGAATTGA 58.919 39.130 0.00 0.00 0.00 2.57
3462 3729 4.707934 TGTGCATGTCCTGAATGAATTGAT 59.292 37.500 0.00 0.00 0.00 2.57
3463 3730 5.887035 TGTGCATGTCCTGAATGAATTGATA 59.113 36.000 0.00 0.00 0.00 2.15
3464 3731 6.038936 TGTGCATGTCCTGAATGAATTGATAG 59.961 38.462 0.00 0.00 0.00 2.08
3465 3732 5.533528 TGCATGTCCTGAATGAATTGATAGG 59.466 40.000 0.00 0.00 0.00 2.57
3466 3733 5.766670 GCATGTCCTGAATGAATTGATAGGA 59.233 40.000 0.00 0.00 32.25 2.94
3472 3739 9.868277 GTCCTGAATGAATTGATAGGACTATAG 57.132 37.037 15.72 0.00 46.62 1.31
3473 3740 9.040259 TCCTGAATGAATTGATAGGACTATAGG 57.960 37.037 4.43 0.00 29.86 2.57
3474 3741 9.040259 CCTGAATGAATTGATAGGACTATAGGA 57.960 37.037 4.43 0.00 0.00 2.94
3475 3742 9.868277 CTGAATGAATTGATAGGACTATAGGAC 57.132 37.037 4.43 0.00 0.00 3.85
3476 3743 9.607333 TGAATGAATTGATAGGACTATAGGACT 57.393 33.333 4.43 4.31 0.00 3.85
3485 3752 9.579932 TGATAGGACTATAGGACTATATGCATG 57.420 37.037 10.16 0.00 0.00 4.06
3486 3753 9.581289 GATAGGACTATAGGACTATATGCATGT 57.419 37.037 10.16 5.06 0.00 3.21
3487 3754 7.889873 AGGACTATAGGACTATATGCATGTC 57.110 40.000 10.16 8.30 0.00 3.06
3488 3755 6.544197 AGGACTATAGGACTATATGCATGTCG 59.456 42.308 10.16 0.69 0.00 4.35
3489 3756 6.137794 ACTATAGGACTATATGCATGTCGC 57.862 41.667 10.16 3.17 42.89 5.19
3508 3775 6.958255 TGTCGCATACATATGAAAAAGATGG 58.042 36.000 10.38 0.00 35.75 3.51
3509 3776 6.765512 TGTCGCATACATATGAAAAAGATGGA 59.234 34.615 10.38 1.39 35.75 3.41
3510 3777 7.072030 GTCGCATACATATGAAAAAGATGGAC 58.928 38.462 10.38 8.27 35.75 4.02
3511 3778 6.765512 TCGCATACATATGAAAAAGATGGACA 59.234 34.615 10.38 0.00 35.75 4.02
3512 3779 7.281999 TCGCATACATATGAAAAAGATGGACAA 59.718 33.333 10.38 0.00 35.75 3.18
3513 3780 8.077991 CGCATACATATGAAAAAGATGGACAAT 58.922 33.333 10.38 0.00 35.75 2.71
3514 3781 9.754382 GCATACATATGAAAAAGATGGACAATT 57.246 29.630 10.38 0.00 35.75 2.32
3522 3789 9.927668 ATGAAAAAGATGGACAATTAAAATCGT 57.072 25.926 0.00 0.00 0.00 3.73
3523 3790 9.405587 TGAAAAAGATGGACAATTAAAATCGTC 57.594 29.630 0.00 0.00 0.00 4.20
3524 3791 8.447787 AAAAAGATGGACAATTAAAATCGTCG 57.552 30.769 0.00 0.00 0.00 5.12
3525 3792 5.156804 AGATGGACAATTAAAATCGTCGC 57.843 39.130 0.00 0.00 0.00 5.19
3526 3793 4.634004 AGATGGACAATTAAAATCGTCGCA 59.366 37.500 0.00 0.00 0.00 5.10
3527 3794 4.955925 TGGACAATTAAAATCGTCGCAT 57.044 36.364 0.00 0.00 0.00 4.73
3528 3795 5.303747 TGGACAATTAAAATCGTCGCATT 57.696 34.783 0.00 0.00 0.00 3.56
3529 3796 5.328691 TGGACAATTAAAATCGTCGCATTC 58.671 37.500 0.00 0.00 0.00 2.67
3530 3797 5.123186 TGGACAATTAAAATCGTCGCATTCT 59.877 36.000 0.00 0.00 0.00 2.40
3531 3798 6.027749 GGACAATTAAAATCGTCGCATTCTT 58.972 36.000 0.00 0.00 0.00 2.52
3532 3799 7.148390 TGGACAATTAAAATCGTCGCATTCTTA 60.148 33.333 0.00 0.00 0.00 2.10
3533 3800 7.855904 GGACAATTAAAATCGTCGCATTCTTAT 59.144 33.333 0.00 0.00 0.00 1.73
3534 3801 9.858247 GACAATTAAAATCGTCGCATTCTTATA 57.142 29.630 0.00 0.00 0.00 0.98
3537 3804 9.659830 AATTAAAATCGTCGCATTCTTATAACC 57.340 29.630 0.00 0.00 0.00 2.85
3538 3805 5.668558 AAATCGTCGCATTCTTATAACCC 57.331 39.130 0.00 0.00 0.00 4.11
3539 3806 4.602340 ATCGTCGCATTCTTATAACCCT 57.398 40.909 0.00 0.00 0.00 4.34
3540 3807 4.395959 TCGTCGCATTCTTATAACCCTT 57.604 40.909 0.00 0.00 0.00 3.95
3541 3808 5.518848 TCGTCGCATTCTTATAACCCTTA 57.481 39.130 0.00 0.00 0.00 2.69
3542 3809 5.904941 TCGTCGCATTCTTATAACCCTTAA 58.095 37.500 0.00 0.00 0.00 1.85
3543 3810 6.339730 TCGTCGCATTCTTATAACCCTTAAA 58.660 36.000 0.00 0.00 0.00 1.52
3544 3811 6.477688 TCGTCGCATTCTTATAACCCTTAAAG 59.522 38.462 0.00 0.00 0.00 1.85
3545 3812 6.477688 CGTCGCATTCTTATAACCCTTAAAGA 59.522 38.462 0.00 0.00 0.00 2.52
3546 3813 7.010738 CGTCGCATTCTTATAACCCTTAAAGAA 59.989 37.037 0.00 0.00 40.96 2.52
3547 3814 8.336080 GTCGCATTCTTATAACCCTTAAAGAAG 58.664 37.037 0.00 0.00 40.28 2.85
3548 3815 8.262227 TCGCATTCTTATAACCCTTAAAGAAGA 58.738 33.333 0.00 0.00 40.28 2.87
3549 3816 8.889717 CGCATTCTTATAACCCTTAAAGAAGAA 58.110 33.333 0.00 0.00 40.28 2.52
3578 3845 9.528489 AATAGAATTAAGTGCAACCCTTTAAGA 57.472 29.630 0.00 0.00 37.80 2.10
3579 3846 7.833285 AGAATTAAGTGCAACCCTTTAAGAA 57.167 32.000 0.00 0.00 37.80 2.52
3580 3847 7.886338 AGAATTAAGTGCAACCCTTTAAGAAG 58.114 34.615 0.00 0.00 37.80 2.85
3581 3848 7.724061 AGAATTAAGTGCAACCCTTTAAGAAGA 59.276 33.333 0.00 0.00 37.80 2.87
3582 3849 7.833285 ATTAAGTGCAACCCTTTAAGAAGAA 57.167 32.000 0.00 0.00 37.80 2.52
3583 3850 7.648039 TTAAGTGCAACCCTTTAAGAAGAAA 57.352 32.000 0.00 0.00 37.80 2.52
3584 3851 6.538945 AAGTGCAACCCTTTAAGAAGAAAA 57.461 33.333 0.00 0.00 37.80 2.29
3585 3852 6.538945 AGTGCAACCCTTTAAGAAGAAAAA 57.461 33.333 0.00 0.00 37.80 1.94
3586 3853 7.124573 AGTGCAACCCTTTAAGAAGAAAAAT 57.875 32.000 0.00 0.00 37.80 1.82
3587 3854 6.986231 AGTGCAACCCTTTAAGAAGAAAAATG 59.014 34.615 0.00 0.00 37.80 2.32
3588 3855 6.983890 GTGCAACCCTTTAAGAAGAAAAATGA 59.016 34.615 0.00 0.00 34.71 2.57
3589 3856 7.494298 GTGCAACCCTTTAAGAAGAAAAATGAA 59.506 33.333 0.00 0.00 34.71 2.57
3590 3857 8.210265 TGCAACCCTTTAAGAAGAAAAATGAAT 58.790 29.630 0.00 0.00 34.71 2.57
3591 3858 9.705290 GCAACCCTTTAAGAAGAAAAATGAATA 57.295 29.630 0.00 0.00 34.71 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 1.227089 CCTCGTAGCGCATCTGCTT 60.227 57.895 11.47 0.00 44.46 3.91
181 192 0.460987 GCTGGTGAGGTCGATGAAGG 60.461 60.000 0.00 0.00 0.00 3.46
322 336 7.279313 TCAAACACTGGTCAAAGTCTACTTAAC 59.721 37.037 0.00 0.00 34.61 2.01
329 343 3.279434 GGTCAAACACTGGTCAAAGTCT 58.721 45.455 0.00 0.00 0.00 3.24
340 354 0.470766 TAAGTGGCCGGTCAAACACT 59.529 50.000 12.16 11.08 45.34 3.55
442 462 1.638529 AAAATGGATCGGTTTGGCCA 58.361 45.000 0.00 0.00 36.97 5.36
454 474 1.668751 GCGTCCGCATTCTAAAATGGA 59.331 47.619 6.82 0.00 42.18 3.41
475 495 1.000955 GGATCGGTCAGGCGAACATAT 59.999 52.381 0.00 0.00 0.00 1.78
476 496 0.387929 GGATCGGTCAGGCGAACATA 59.612 55.000 0.00 0.00 0.00 2.29
481 501 2.752640 TTCGGATCGGTCAGGCGA 60.753 61.111 0.00 0.00 0.00 5.54
496 516 6.197655 AGTTTTTATTTGCTTTTCGTCCGTTC 59.802 34.615 0.00 0.00 0.00 3.95
533 553 3.834610 ACTCTACTTCAACGAACCGATG 58.165 45.455 0.00 0.00 0.00 3.84
572 592 3.374367 GTGTCGTGTCTAGAGCACATCTA 59.626 47.826 19.00 5.86 39.64 1.98
573 593 2.162608 GTGTCGTGTCTAGAGCACATCT 59.837 50.000 19.00 0.00 42.47 2.90
574 594 2.095212 TGTGTCGTGTCTAGAGCACATC 60.095 50.000 19.00 13.40 36.71 3.06
575 595 1.886542 TGTGTCGTGTCTAGAGCACAT 59.113 47.619 19.00 0.00 36.71 3.21
576 596 1.001706 GTGTGTCGTGTCTAGAGCACA 60.002 52.381 19.00 14.07 36.71 4.57
577 597 1.666311 GGTGTGTCGTGTCTAGAGCAC 60.666 57.143 12.68 12.68 0.00 4.40
578 598 0.596577 GGTGTGTCGTGTCTAGAGCA 59.403 55.000 0.00 0.00 0.00 4.26
579 599 0.109226 GGGTGTGTCGTGTCTAGAGC 60.109 60.000 0.00 0.00 0.00 4.09
580 600 1.535833 AGGGTGTGTCGTGTCTAGAG 58.464 55.000 0.00 0.00 0.00 2.43
581 601 2.708051 CTAGGGTGTGTCGTGTCTAGA 58.292 52.381 0.00 0.00 0.00 2.43
582 602 1.132643 GCTAGGGTGTGTCGTGTCTAG 59.867 57.143 0.00 0.00 0.00 2.43
583 603 1.171308 GCTAGGGTGTGTCGTGTCTA 58.829 55.000 0.00 0.00 0.00 2.59
584 604 0.826256 TGCTAGGGTGTGTCGTGTCT 60.826 55.000 0.00 0.00 0.00 3.41
585 605 0.246635 ATGCTAGGGTGTGTCGTGTC 59.753 55.000 0.00 0.00 0.00 3.67
586 606 0.246635 GATGCTAGGGTGTGTCGTGT 59.753 55.000 0.00 0.00 0.00 4.49
587 607 0.532573 AGATGCTAGGGTGTGTCGTG 59.467 55.000 0.00 0.00 0.00 4.35
588 608 1.267121 AAGATGCTAGGGTGTGTCGT 58.733 50.000 0.00 0.00 0.00 4.34
589 609 2.093973 AGAAAGATGCTAGGGTGTGTCG 60.094 50.000 0.00 0.00 0.00 4.35
590 610 3.618690 AGAAAGATGCTAGGGTGTGTC 57.381 47.619 0.00 0.00 0.00 3.67
591 611 3.197983 GGTAGAAAGATGCTAGGGTGTGT 59.802 47.826 0.00 0.00 0.00 3.72
592 612 3.738281 CGGTAGAAAGATGCTAGGGTGTG 60.738 52.174 0.00 0.00 0.00 3.82
593 613 2.431057 CGGTAGAAAGATGCTAGGGTGT 59.569 50.000 0.00 0.00 0.00 4.16
594 614 2.224066 CCGGTAGAAAGATGCTAGGGTG 60.224 54.545 0.00 0.00 0.00 4.61
595 615 2.040178 CCGGTAGAAAGATGCTAGGGT 58.960 52.381 0.00 0.00 0.00 4.34
596 616 2.317040 TCCGGTAGAAAGATGCTAGGG 58.683 52.381 0.00 0.00 0.00 3.53
597 617 4.402056 TTTCCGGTAGAAAGATGCTAGG 57.598 45.455 0.00 0.00 39.60 3.02
630 650 6.385649 TGAGACCAATGTTTTTAACTCCAC 57.614 37.500 0.00 0.00 0.00 4.02
631 651 6.605594 AGTTGAGACCAATGTTTTTAACTCCA 59.394 34.615 0.00 0.00 34.39 3.86
632 652 6.918022 CAGTTGAGACCAATGTTTTTAACTCC 59.082 38.462 0.00 0.00 34.39 3.85
633 653 7.432252 CACAGTTGAGACCAATGTTTTTAACTC 59.568 37.037 0.00 0.00 34.39 3.01
634 654 7.122055 TCACAGTTGAGACCAATGTTTTTAACT 59.878 33.333 0.00 0.00 34.39 2.24
635 655 7.254852 TCACAGTTGAGACCAATGTTTTTAAC 58.745 34.615 0.00 0.00 34.39 2.01
644 664 2.508526 GCCTTCACAGTTGAGACCAAT 58.491 47.619 0.00 0.00 34.39 3.16
682 704 0.904649 AATGGATGTCTGTCGCCTCA 59.095 50.000 0.00 0.00 0.00 3.86
687 709 0.459899 TCGGGAATGGATGTCTGTCG 59.540 55.000 0.00 0.00 0.00 4.35
728 750 3.196613 GCCTAAATCGTAGGAGGCG 57.803 57.895 3.53 0.00 44.72 5.52
804 831 2.165030 CGAGTTACTTAAGCGGGGAGAA 59.835 50.000 1.29 0.00 0.00 2.87
869 896 3.081409 CCCCTCCGGTTGGTCGAT 61.081 66.667 0.00 0.00 36.30 3.59
906 933 2.151388 GGTGGTGGTGGTGGGTACT 61.151 63.158 0.00 0.00 0.00 2.73
926 953 2.642700 GCGCGAAAAGGGAGCAAA 59.357 55.556 12.10 0.00 34.27 3.68
946 973 1.296727 GCGACGGCCTAGCTTAATTT 58.703 50.000 0.00 0.00 0.00 1.82
1023 1050 2.482316 CGTCTTGTACCTGTTGTGGTGA 60.482 50.000 0.00 0.00 41.05 4.02
1056 1083 1.737008 GAAGACGAAGCCGGTGACC 60.737 63.158 1.90 0.00 40.78 4.02
1095 1122 4.087892 AAGATGCAGCCGCCGACT 62.088 61.111 0.00 0.00 37.32 4.18
1167 1199 0.110419 CACCCACACACAATTACGCG 60.110 55.000 3.53 3.53 0.00 6.01
1177 1217 0.333312 AGGAAACCAACACCCACACA 59.667 50.000 0.00 0.00 0.00 3.72
1368 1412 0.614979 CGGACAGGAAGAGGGAGGAA 60.615 60.000 0.00 0.00 0.00 3.36
1510 1554 2.124570 GCCGGTGATGAGCATGGT 60.125 61.111 1.90 0.00 0.00 3.55
2082 2300 2.566997 CGTGATGACGGACGACATC 58.433 57.895 23.23 23.23 43.74 3.06
2508 2726 2.224137 GGCGATGAAGATGGTCATGAGA 60.224 50.000 0.00 0.00 38.38 3.27
2685 2903 1.703014 ATGCATGGCTCCAGACGGAT 61.703 55.000 0.00 0.00 41.79 4.18
2766 3025 0.308993 GCTGGGTAATCATGAAGCGC 59.691 55.000 0.00 0.00 0.00 5.92
2772 3031 3.624861 GTCTTGTCAGCTGGGTAATCATG 59.375 47.826 15.13 6.67 0.00 3.07
2970 3237 4.686972 CGACCATGTAGTGAGATTGTGAT 58.313 43.478 0.00 0.00 0.00 3.06
2971 3238 3.676049 GCGACCATGTAGTGAGATTGTGA 60.676 47.826 0.00 0.00 0.00 3.58
2994 3261 4.520179 ACTGAGCAATTGATCATGCAGTA 58.480 39.130 25.38 2.30 44.95 2.74
3033 3300 2.290641 GCAACACGTTCATCTGAAAGGT 59.709 45.455 9.98 2.42 37.75 3.50
3034 3301 2.290367 TGCAACACGTTCATCTGAAAGG 59.710 45.455 9.98 1.88 37.75 3.11
3035 3302 3.607422 TGCAACACGTTCATCTGAAAG 57.393 42.857 4.61 4.61 39.02 2.62
3036 3303 3.304592 CCATGCAACACGTTCATCTGAAA 60.305 43.478 0.00 0.00 35.58 2.69
3037 3304 2.226200 CCATGCAACACGTTCATCTGAA 59.774 45.455 0.00 0.00 0.00 3.02
3038 3305 1.805943 CCATGCAACACGTTCATCTGA 59.194 47.619 0.00 0.00 0.00 3.27
3039 3306 1.536766 ACCATGCAACACGTTCATCTG 59.463 47.619 0.00 0.00 0.00 2.90
3040 3307 1.806542 GACCATGCAACACGTTCATCT 59.193 47.619 0.00 0.00 0.00 2.90
3041 3308 1.806542 AGACCATGCAACACGTTCATC 59.193 47.619 0.00 0.00 0.00 2.92
3042 3309 1.536766 CAGACCATGCAACACGTTCAT 59.463 47.619 0.00 0.00 0.00 2.57
3043 3310 0.943673 CAGACCATGCAACACGTTCA 59.056 50.000 0.00 0.00 0.00 3.18
3044 3311 1.225855 TCAGACCATGCAACACGTTC 58.774 50.000 0.00 0.00 0.00 3.95
3045 3312 1.896220 ATCAGACCATGCAACACGTT 58.104 45.000 0.00 0.00 0.00 3.99
3046 3313 2.289382 TGTATCAGACCATGCAACACGT 60.289 45.455 0.00 0.00 0.00 4.49
3047 3314 2.345876 TGTATCAGACCATGCAACACG 58.654 47.619 0.00 0.00 0.00 4.49
3048 3315 4.282950 CATGTATCAGACCATGCAACAC 57.717 45.455 0.00 0.00 32.80 3.32
3054 3321 3.746940 TCCATGCATGTATCAGACCATG 58.253 45.455 24.58 5.47 41.08 3.66
3055 3322 4.332828 CATCCATGCATGTATCAGACCAT 58.667 43.478 24.58 0.00 0.00 3.55
3056 3323 3.746940 CATCCATGCATGTATCAGACCA 58.253 45.455 24.58 0.00 0.00 4.02
3070 3337 1.871676 CAGAAGTCATCGGCATCCATG 59.128 52.381 0.00 0.00 0.00 3.66
3071 3338 1.487976 ACAGAAGTCATCGGCATCCAT 59.512 47.619 0.00 0.00 0.00 3.41
3072 3339 0.904649 ACAGAAGTCATCGGCATCCA 59.095 50.000 0.00 0.00 0.00 3.41
3073 3340 2.029838 AACAGAAGTCATCGGCATCC 57.970 50.000 0.00 0.00 0.00 3.51
3074 3341 3.436704 TGAAAACAGAAGTCATCGGCATC 59.563 43.478 0.00 0.00 0.00 3.91
3075 3342 3.411446 TGAAAACAGAAGTCATCGGCAT 58.589 40.909 0.00 0.00 0.00 4.40
3076 3343 2.807967 CTGAAAACAGAAGTCATCGGCA 59.192 45.455 0.00 0.00 0.00 5.69
3077 3344 2.808543 ACTGAAAACAGAAGTCATCGGC 59.191 45.455 0.00 0.00 0.00 5.54
3078 3345 5.424121 AAACTGAAAACAGAAGTCATCGG 57.576 39.130 0.00 0.00 0.00 4.18
3079 3346 6.291269 GCAAAAACTGAAAACAGAAGTCATCG 60.291 38.462 0.00 0.00 0.00 3.84
3080 3347 6.531240 TGCAAAAACTGAAAACAGAAGTCATC 59.469 34.615 0.00 0.00 0.00 2.92
3081 3348 6.397272 TGCAAAAACTGAAAACAGAAGTCAT 58.603 32.000 0.00 0.00 0.00 3.06
3082 3349 5.777802 TGCAAAAACTGAAAACAGAAGTCA 58.222 33.333 0.00 0.00 0.00 3.41
3083 3350 6.531240 TGATGCAAAAACTGAAAACAGAAGTC 59.469 34.615 0.00 0.00 0.00 3.01
3084 3351 6.311200 GTGATGCAAAAACTGAAAACAGAAGT 59.689 34.615 0.00 0.00 0.00 3.01
3085 3352 6.506827 CGTGATGCAAAAACTGAAAACAGAAG 60.507 38.462 0.00 0.00 0.00 2.85
3086 3353 5.288232 CGTGATGCAAAAACTGAAAACAGAA 59.712 36.000 0.00 0.00 0.00 3.02
3087 3354 4.797868 CGTGATGCAAAAACTGAAAACAGA 59.202 37.500 0.00 0.00 0.00 3.41
3088 3355 4.562394 ACGTGATGCAAAAACTGAAAACAG 59.438 37.500 0.00 0.00 0.00 3.16
3089 3356 4.325741 CACGTGATGCAAAAACTGAAAACA 59.674 37.500 10.90 0.00 0.00 2.83
3090 3357 4.810125 CACGTGATGCAAAAACTGAAAAC 58.190 39.130 10.90 0.00 0.00 2.43
3122 3389 7.008447 GTGTTTGCGTCTGTAATGTGTTAAAAA 59.992 33.333 0.00 0.00 0.00 1.94
3123 3390 6.469595 GTGTTTGCGTCTGTAATGTGTTAAAA 59.530 34.615 0.00 0.00 0.00 1.52
3124 3391 5.966503 GTGTTTGCGTCTGTAATGTGTTAAA 59.033 36.000 0.00 0.00 0.00 1.52
3125 3392 5.294799 AGTGTTTGCGTCTGTAATGTGTTAA 59.705 36.000 0.00 0.00 0.00 2.01
3126 3393 4.812091 AGTGTTTGCGTCTGTAATGTGTTA 59.188 37.500 0.00 0.00 0.00 2.41
3127 3394 3.625764 AGTGTTTGCGTCTGTAATGTGTT 59.374 39.130 0.00 0.00 0.00 3.32
3128 3395 3.202906 AGTGTTTGCGTCTGTAATGTGT 58.797 40.909 0.00 0.00 0.00 3.72
3129 3396 3.247411 TGAGTGTTTGCGTCTGTAATGTG 59.753 43.478 0.00 0.00 0.00 3.21
3130 3397 3.462982 TGAGTGTTTGCGTCTGTAATGT 58.537 40.909 0.00 0.00 0.00 2.71
3131 3398 4.668576 ATGAGTGTTTGCGTCTGTAATG 57.331 40.909 0.00 0.00 0.00 1.90
3132 3399 9.193133 GTATATATGAGTGTTTGCGTCTGTAAT 57.807 33.333 0.00 0.00 0.00 1.89
3133 3400 7.377662 CGTATATATGAGTGTTTGCGTCTGTAA 59.622 37.037 0.00 0.00 0.00 2.41
3134 3401 6.854381 CGTATATATGAGTGTTTGCGTCTGTA 59.146 38.462 0.00 0.00 0.00 2.74
3135 3402 5.685954 CGTATATATGAGTGTTTGCGTCTGT 59.314 40.000 0.00 0.00 0.00 3.41
3136 3403 5.685954 ACGTATATATGAGTGTTTGCGTCTG 59.314 40.000 8.98 0.00 0.00 3.51
3137 3404 5.685954 CACGTATATATGAGTGTTTGCGTCT 59.314 40.000 8.98 0.00 0.00 4.18
3138 3405 5.609696 GCACGTATATATGAGTGTTTGCGTC 60.610 44.000 17.79 3.05 36.99 5.19
3139 3406 4.208460 GCACGTATATATGAGTGTTTGCGT 59.792 41.667 17.79 0.00 36.99 5.24
3140 3407 4.208253 TGCACGTATATATGAGTGTTTGCG 59.792 41.667 17.79 0.00 36.99 4.85
3141 3408 5.651172 TGCACGTATATATGAGTGTTTGC 57.349 39.130 17.79 7.35 36.99 3.68
3142 3409 8.293114 TGTATGCACGTATATATGAGTGTTTG 57.707 34.615 17.79 0.00 36.99 2.93
3143 3410 8.880878 TTGTATGCACGTATATATGAGTGTTT 57.119 30.769 17.79 11.26 36.99 2.83
3144 3411 9.140286 GATTGTATGCACGTATATATGAGTGTT 57.860 33.333 17.79 11.49 36.99 3.32
3145 3412 8.303876 TGATTGTATGCACGTATATATGAGTGT 58.696 33.333 17.79 7.19 36.99 3.55
3146 3413 8.587111 GTGATTGTATGCACGTATATATGAGTG 58.413 37.037 8.98 14.39 37.63 3.51
3147 3414 7.759886 GGTGATTGTATGCACGTATATATGAGT 59.240 37.037 8.98 0.00 35.91 3.41
3148 3415 7.222805 GGGTGATTGTATGCACGTATATATGAG 59.777 40.741 8.98 2.08 35.91 2.90
3149 3416 7.039270 GGGTGATTGTATGCACGTATATATGA 58.961 38.462 8.98 0.00 35.91 2.15
3150 3417 6.816140 TGGGTGATTGTATGCACGTATATATG 59.184 38.462 0.12 0.12 35.91 1.78
3151 3418 6.941857 TGGGTGATTGTATGCACGTATATAT 58.058 36.000 0.00 0.00 35.91 0.86
3152 3419 6.347859 TGGGTGATTGTATGCACGTATATA 57.652 37.500 0.00 0.00 35.91 0.86
3153 3420 5.222079 TGGGTGATTGTATGCACGTATAT 57.778 39.130 0.00 0.00 35.91 0.86
3154 3421 4.674281 TGGGTGATTGTATGCACGTATA 57.326 40.909 0.00 0.00 35.91 1.47
3155 3422 3.552132 TGGGTGATTGTATGCACGTAT 57.448 42.857 0.00 0.00 35.91 3.06
3156 3423 3.552132 ATGGGTGATTGTATGCACGTA 57.448 42.857 0.00 0.00 35.91 3.57
3157 3424 2.418368 ATGGGTGATTGTATGCACGT 57.582 45.000 0.00 0.00 35.91 4.49
3158 3425 4.064388 TCATATGGGTGATTGTATGCACG 58.936 43.478 2.13 0.00 35.91 5.34
3159 3426 5.299028 TGTTCATATGGGTGATTGTATGCAC 59.701 40.000 2.13 0.00 0.00 4.57
3160 3427 5.299028 GTGTTCATATGGGTGATTGTATGCA 59.701 40.000 2.13 0.00 0.00 3.96
3161 3428 5.299028 TGTGTTCATATGGGTGATTGTATGC 59.701 40.000 2.13 0.00 0.00 3.14
3162 3429 6.318396 TGTGTGTTCATATGGGTGATTGTATG 59.682 38.462 2.13 0.00 0.00 2.39
3163 3430 6.422333 TGTGTGTTCATATGGGTGATTGTAT 58.578 36.000 2.13 0.00 0.00 2.29
3164 3431 5.810095 TGTGTGTTCATATGGGTGATTGTA 58.190 37.500 2.13 0.00 0.00 2.41
3165 3432 4.661222 TGTGTGTTCATATGGGTGATTGT 58.339 39.130 2.13 0.00 0.00 2.71
3166 3433 5.357596 TCATGTGTGTTCATATGGGTGATTG 59.642 40.000 2.13 0.00 41.41 2.67
3167 3434 5.508567 TCATGTGTGTTCATATGGGTGATT 58.491 37.500 2.13 0.00 41.41 2.57
3168 3435 5.104402 TCTCATGTGTGTTCATATGGGTGAT 60.104 40.000 2.13 0.00 42.01 3.06
3169 3436 4.224818 TCTCATGTGTGTTCATATGGGTGA 59.775 41.667 2.13 0.00 42.01 4.02
3170 3437 4.516323 TCTCATGTGTGTTCATATGGGTG 58.484 43.478 2.13 0.00 42.01 4.61
3171 3438 4.842531 TCTCATGTGTGTTCATATGGGT 57.157 40.909 2.13 0.00 42.01 4.51
3172 3439 5.649395 AGTTTCTCATGTGTGTTCATATGGG 59.351 40.000 2.13 2.68 42.48 4.00
3173 3440 6.372381 TCAGTTTCTCATGTGTGTTCATATGG 59.628 38.462 2.13 0.00 41.41 2.74
3174 3441 7.368480 TCAGTTTCTCATGTGTGTTCATATG 57.632 36.000 0.00 0.00 42.09 1.78
3175 3442 6.093219 GCTCAGTTTCTCATGTGTGTTCATAT 59.907 38.462 0.00 0.00 0.00 1.78
3176 3443 5.409520 GCTCAGTTTCTCATGTGTGTTCATA 59.590 40.000 0.00 0.00 0.00 2.15
3177 3444 4.214971 GCTCAGTTTCTCATGTGTGTTCAT 59.785 41.667 0.00 0.00 0.00 2.57
3178 3445 3.561310 GCTCAGTTTCTCATGTGTGTTCA 59.439 43.478 0.00 0.00 0.00 3.18
3179 3446 3.812053 AGCTCAGTTTCTCATGTGTGTTC 59.188 43.478 0.00 0.00 0.00 3.18
3180 3447 3.813443 AGCTCAGTTTCTCATGTGTGTT 58.187 40.909 0.00 0.00 0.00 3.32
3181 3448 3.482156 AGCTCAGTTTCTCATGTGTGT 57.518 42.857 0.00 0.00 0.00 3.72
3182 3449 4.274214 TGAAAGCTCAGTTTCTCATGTGTG 59.726 41.667 0.00 0.00 37.34 3.82
3183 3450 4.454678 TGAAAGCTCAGTTTCTCATGTGT 58.545 39.130 0.00 0.00 37.34 3.72
3184 3451 5.624344 ATGAAAGCTCAGTTTCTCATGTG 57.376 39.130 0.00 0.00 37.34 3.21
3185 3452 7.108194 TGATATGAAAGCTCAGTTTCTCATGT 58.892 34.615 8.29 3.70 37.34 3.21
3186 3453 7.549615 TGATATGAAAGCTCAGTTTCTCATG 57.450 36.000 8.29 0.00 37.34 3.07
3187 3454 8.212312 AGATGATATGAAAGCTCAGTTTCTCAT 58.788 33.333 0.00 0.00 37.34 2.90
3188 3455 7.563020 AGATGATATGAAAGCTCAGTTTCTCA 58.437 34.615 0.00 0.00 37.34 3.27
3189 3456 8.336806 CAAGATGATATGAAAGCTCAGTTTCTC 58.663 37.037 0.00 0.00 37.34 2.87
3190 3457 8.045507 TCAAGATGATATGAAAGCTCAGTTTCT 58.954 33.333 0.00 0.00 37.34 2.52
3191 3458 8.206325 TCAAGATGATATGAAAGCTCAGTTTC 57.794 34.615 0.00 0.00 37.02 2.78
3192 3459 8.045507 TCTCAAGATGATATGAAAGCTCAGTTT 58.954 33.333 0.00 0.00 34.23 2.66
3193 3460 7.563020 TCTCAAGATGATATGAAAGCTCAGTT 58.437 34.615 0.00 0.00 34.23 3.16
3194 3461 7.122138 TCTCAAGATGATATGAAAGCTCAGT 57.878 36.000 0.00 0.00 34.23 3.41
3195 3462 8.610248 AATCTCAAGATGATATGAAAGCTCAG 57.390 34.615 0.00 0.00 32.81 3.35
3196 3463 8.975663 AAATCTCAAGATGATATGAAAGCTCA 57.024 30.769 0.00 0.00 34.49 4.26
3199 3466 9.591404 CGTAAAATCTCAAGATGATATGAAAGC 57.409 33.333 0.00 0.00 34.49 3.51
3206 3473 9.464714 GCTACTTCGTAAAATCTCAAGATGATA 57.535 33.333 0.00 0.00 34.49 2.15
3207 3474 7.439655 GGCTACTTCGTAAAATCTCAAGATGAT 59.560 37.037 0.00 0.00 34.49 2.45
3208 3475 6.757010 GGCTACTTCGTAAAATCTCAAGATGA 59.243 38.462 0.00 0.00 34.49 2.92
3209 3476 6.291849 CGGCTACTTCGTAAAATCTCAAGATG 60.292 42.308 0.00 0.00 34.49 2.90
3210 3477 5.749109 CGGCTACTTCGTAAAATCTCAAGAT 59.251 40.000 0.00 0.00 36.07 2.40
3211 3478 5.100259 CGGCTACTTCGTAAAATCTCAAGA 58.900 41.667 0.00 0.00 0.00 3.02
3212 3479 4.863131 ACGGCTACTTCGTAAAATCTCAAG 59.137 41.667 0.00 0.00 39.22 3.02
3213 3480 4.813027 ACGGCTACTTCGTAAAATCTCAA 58.187 39.130 0.00 0.00 39.22 3.02
3214 3481 4.445452 ACGGCTACTTCGTAAAATCTCA 57.555 40.909 0.00 0.00 39.22 3.27
3215 3482 4.974888 CCTACGGCTACTTCGTAAAATCTC 59.025 45.833 0.00 0.00 41.62 2.75
3216 3483 4.735873 GCCTACGGCTACTTCGTAAAATCT 60.736 45.833 0.00 0.00 46.69 2.40
3217 3484 3.488678 GCCTACGGCTACTTCGTAAAATC 59.511 47.826 0.00 0.00 46.69 2.17
3218 3485 3.451526 GCCTACGGCTACTTCGTAAAAT 58.548 45.455 0.00 0.00 46.69 1.82
3219 3486 2.879826 GCCTACGGCTACTTCGTAAAA 58.120 47.619 0.00 0.00 46.69 1.52
3220 3487 2.566952 GCCTACGGCTACTTCGTAAA 57.433 50.000 0.00 0.00 46.69 2.01
3232 3499 1.726265 GACTACGAGGTGCCTACGG 59.274 63.158 12.22 0.36 0.00 4.02
3233 3500 1.086067 TCGACTACGAGGTGCCTACG 61.086 60.000 0.00 0.00 43.81 3.51
3234 3501 2.772739 TCGACTACGAGGTGCCTAC 58.227 57.895 0.00 0.00 43.81 3.18
3244 3511 3.121030 ACGTCCCCGTCGACTACG 61.121 66.667 20.51 20.51 46.28 3.51
3257 3524 1.340248 TGTTCAGTGGAAGGAGACGTC 59.660 52.381 7.70 7.70 38.20 4.34
3258 3525 1.410004 TGTTCAGTGGAAGGAGACGT 58.590 50.000 0.00 0.00 32.62 4.34
3259 3526 2.289072 ACATGTTCAGTGGAAGGAGACG 60.289 50.000 0.00 0.00 32.62 4.18
3260 3527 3.409026 ACATGTTCAGTGGAAGGAGAC 57.591 47.619 0.00 0.00 32.62 3.36
3261 3528 3.260884 GGTACATGTTCAGTGGAAGGAGA 59.739 47.826 2.30 0.00 32.62 3.71
3262 3529 3.007940 TGGTACATGTTCAGTGGAAGGAG 59.992 47.826 2.30 0.00 32.62 3.69
3263 3530 2.976185 TGGTACATGTTCAGTGGAAGGA 59.024 45.455 2.30 0.00 32.62 3.36
3264 3531 3.074412 GTGGTACATGTTCAGTGGAAGG 58.926 50.000 2.30 0.00 44.52 3.46
3265 3532 3.748048 CAGTGGTACATGTTCAGTGGAAG 59.252 47.826 20.24 4.27 44.52 3.46
3266 3533 3.389656 TCAGTGGTACATGTTCAGTGGAA 59.610 43.478 24.19 12.09 44.52 3.53
3267 3534 2.969262 TCAGTGGTACATGTTCAGTGGA 59.031 45.455 24.19 14.73 44.52 4.02
3268 3535 3.401033 TCAGTGGTACATGTTCAGTGG 57.599 47.619 24.19 13.40 44.52 4.00
3269 3536 5.749596 TTTTCAGTGGTACATGTTCAGTG 57.250 39.130 21.22 21.22 44.52 3.66
3270 3537 5.473504 GGATTTTCAGTGGTACATGTTCAGT 59.526 40.000 2.30 3.47 44.52 3.41
3271 3538 5.707298 AGGATTTTCAGTGGTACATGTTCAG 59.293 40.000 2.30 0.00 44.52 3.02
3272 3539 5.473162 CAGGATTTTCAGTGGTACATGTTCA 59.527 40.000 2.30 0.00 44.52 3.18
3273 3540 5.705441 TCAGGATTTTCAGTGGTACATGTTC 59.295 40.000 2.30 0.00 44.52 3.18
3274 3541 5.630121 TCAGGATTTTCAGTGGTACATGTT 58.370 37.500 2.30 0.00 44.52 2.71
3275 3542 5.241403 TCAGGATTTTCAGTGGTACATGT 57.759 39.130 2.69 2.69 44.52 3.21
3276 3543 6.573664 TTTCAGGATTTTCAGTGGTACATG 57.426 37.500 0.00 0.00 44.52 3.21
3277 3544 8.877864 TTATTTCAGGATTTTCAGTGGTACAT 57.122 30.769 0.00 0.00 44.52 2.29
3278 3545 8.698973 TTTATTTCAGGATTTTCAGTGGTACA 57.301 30.769 0.00 0.00 0.00 2.90
3279 3546 9.788960 GATTTATTTCAGGATTTTCAGTGGTAC 57.211 33.333 0.00 0.00 0.00 3.34
3280 3547 8.966868 GGATTTATTTCAGGATTTTCAGTGGTA 58.033 33.333 0.00 0.00 0.00 3.25
3281 3548 7.454380 TGGATTTATTTCAGGATTTTCAGTGGT 59.546 33.333 0.00 0.00 0.00 4.16
3282 3549 7.839907 TGGATTTATTTCAGGATTTTCAGTGG 58.160 34.615 0.00 0.00 0.00 4.00
3283 3550 8.922058 CTGGATTTATTTCAGGATTTTCAGTG 57.078 34.615 0.00 0.00 0.00 3.66
3293 3560 7.665559 TCGGATTTATCCTGGATTTATTTCAGG 59.334 37.037 15.55 0.00 46.91 3.86
3294 3561 8.621532 TCGGATTTATCCTGGATTTATTTCAG 57.378 34.615 15.55 6.56 44.93 3.02
3295 3562 8.846211 GTTCGGATTTATCCTGGATTTATTTCA 58.154 33.333 15.55 0.00 44.93 2.69
3296 3563 8.846211 TGTTCGGATTTATCCTGGATTTATTTC 58.154 33.333 15.55 5.55 44.93 2.17
3297 3564 8.630037 GTGTTCGGATTTATCCTGGATTTATTT 58.370 33.333 15.55 0.00 44.93 1.40
3298 3565 7.230712 GGTGTTCGGATTTATCCTGGATTTATT 59.769 37.037 15.55 0.48 44.93 1.40
3299 3566 6.715264 GGTGTTCGGATTTATCCTGGATTTAT 59.285 38.462 15.55 8.59 44.93 1.40
3300 3567 6.059484 GGTGTTCGGATTTATCCTGGATTTA 58.941 40.000 15.55 3.70 44.93 1.40
3301 3568 4.887655 GGTGTTCGGATTTATCCTGGATTT 59.112 41.667 15.55 0.18 44.93 2.17
3302 3569 4.080015 TGGTGTTCGGATTTATCCTGGATT 60.080 41.667 15.55 0.00 44.93 3.01
3303 3570 3.458118 TGGTGTTCGGATTTATCCTGGAT 59.542 43.478 14.66 14.66 44.93 3.41
3304 3571 2.841266 TGGTGTTCGGATTTATCCTGGA 59.159 45.455 0.00 0.00 44.93 3.86
3305 3572 3.118408 TCTGGTGTTCGGATTTATCCTGG 60.118 47.826 7.16 0.00 44.93 4.45
3306 3573 4.137116 TCTGGTGTTCGGATTTATCCTG 57.863 45.455 7.16 1.65 44.93 3.86
3307 3574 4.837093 TTCTGGTGTTCGGATTTATCCT 57.163 40.909 7.16 0.00 44.93 3.24
3308 3575 4.881850 ACATTCTGGTGTTCGGATTTATCC 59.118 41.667 0.00 0.00 43.65 2.59
3309 3576 5.584649 TCACATTCTGGTGTTCGGATTTATC 59.415 40.000 0.00 0.00 39.76 1.75
3310 3577 5.496556 TCACATTCTGGTGTTCGGATTTAT 58.503 37.500 0.00 0.00 39.76 1.40
3311 3578 4.900684 TCACATTCTGGTGTTCGGATTTA 58.099 39.130 0.00 0.00 39.76 1.40
3312 3579 3.750371 TCACATTCTGGTGTTCGGATTT 58.250 40.909 0.00 0.00 39.76 2.17
3313 3580 3.417069 TCACATTCTGGTGTTCGGATT 57.583 42.857 0.00 0.00 39.76 3.01
3314 3581 3.417069 TTCACATTCTGGTGTTCGGAT 57.583 42.857 0.00 0.00 39.76 4.18
3315 3582 2.875933 GTTTCACATTCTGGTGTTCGGA 59.124 45.455 0.00 0.00 39.76 4.55
3316 3583 2.031157 GGTTTCACATTCTGGTGTTCGG 60.031 50.000 0.00 0.00 39.76 4.30
3317 3584 2.878406 AGGTTTCACATTCTGGTGTTCG 59.122 45.455 0.00 0.00 39.76 3.95
3318 3585 3.882888 TCAGGTTTCACATTCTGGTGTTC 59.117 43.478 0.00 0.00 39.76 3.18
3319 3586 3.897239 TCAGGTTTCACATTCTGGTGTT 58.103 40.909 0.00 0.00 39.76 3.32
3320 3587 3.576078 TCAGGTTTCACATTCTGGTGT 57.424 42.857 0.00 0.00 39.76 4.16
3321 3588 3.192001 CCATCAGGTTTCACATTCTGGTG 59.808 47.826 0.00 0.00 37.90 4.17
3322 3589 3.424703 CCATCAGGTTTCACATTCTGGT 58.575 45.455 0.00 0.00 0.00 4.00
3323 3590 2.756760 CCCATCAGGTTTCACATTCTGG 59.243 50.000 0.00 0.00 0.00 3.86
3324 3591 2.165030 GCCCATCAGGTTTCACATTCTG 59.835 50.000 0.00 0.00 38.26 3.02
3325 3592 2.042162 AGCCCATCAGGTTTCACATTCT 59.958 45.455 0.00 0.00 38.26 2.40
3326 3593 2.165030 CAGCCCATCAGGTTTCACATTC 59.835 50.000 0.00 0.00 38.26 2.67
3327 3594 2.173519 CAGCCCATCAGGTTTCACATT 58.826 47.619 0.00 0.00 38.26 2.71
3328 3595 1.617804 CCAGCCCATCAGGTTTCACAT 60.618 52.381 0.00 0.00 38.26 3.21
3329 3596 0.251297 CCAGCCCATCAGGTTTCACA 60.251 55.000 0.00 0.00 38.26 3.58
3330 3597 0.251341 ACCAGCCCATCAGGTTTCAC 60.251 55.000 0.00 0.00 38.26 3.18
3331 3598 0.251297 CACCAGCCCATCAGGTTTCA 60.251 55.000 0.00 0.00 38.26 2.69
3332 3599 0.038166 TCACCAGCCCATCAGGTTTC 59.962 55.000 0.00 0.00 38.26 2.78
3333 3600 0.038744 CTCACCAGCCCATCAGGTTT 59.961 55.000 0.00 0.00 38.26 3.27
3334 3601 0.842030 TCTCACCAGCCCATCAGGTT 60.842 55.000 0.00 0.00 38.26 3.50
3335 3602 1.229625 TCTCACCAGCCCATCAGGT 60.230 57.895 0.00 0.00 38.26 4.00
3336 3603 1.222936 GTCTCACCAGCCCATCAGG 59.777 63.158 0.00 0.00 39.47 3.86
3337 3604 0.325933 TTGTCTCACCAGCCCATCAG 59.674 55.000 0.00 0.00 0.00 2.90
3338 3605 0.036732 GTTGTCTCACCAGCCCATCA 59.963 55.000 0.00 0.00 0.00 3.07
3339 3606 0.326264 AGTTGTCTCACCAGCCCATC 59.674 55.000 0.00 0.00 0.00 3.51
3340 3607 0.037303 CAGTTGTCTCACCAGCCCAT 59.963 55.000 0.00 0.00 0.00 4.00
3341 3608 1.344953 ACAGTTGTCTCACCAGCCCA 61.345 55.000 0.00 0.00 0.00 5.36
3342 3609 0.603975 GACAGTTGTCTCACCAGCCC 60.604 60.000 5.04 0.00 41.65 5.19
3343 3610 0.603975 GGACAGTTGTCTCACCAGCC 60.604 60.000 11.67 0.00 44.20 4.85
3344 3611 0.394565 AGGACAGTTGTCTCACCAGC 59.605 55.000 11.67 0.00 44.20 4.85
3345 3612 2.366916 AGAAGGACAGTTGTCTCACCAG 59.633 50.000 11.67 0.00 44.20 4.00
3346 3613 2.398588 AGAAGGACAGTTGTCTCACCA 58.601 47.619 11.67 0.00 44.20 4.17
3347 3614 4.308265 GTTAGAAGGACAGTTGTCTCACC 58.692 47.826 11.67 0.00 44.20 4.02
3348 3615 4.202223 TGGTTAGAAGGACAGTTGTCTCAC 60.202 45.833 11.67 4.27 44.20 3.51
3349 3616 3.964688 TGGTTAGAAGGACAGTTGTCTCA 59.035 43.478 11.67 0.00 44.20 3.27
3350 3617 4.602340 TGGTTAGAAGGACAGTTGTCTC 57.398 45.455 11.67 3.32 44.20 3.36
3351 3618 4.020128 GGATGGTTAGAAGGACAGTTGTCT 60.020 45.833 11.67 0.00 44.20 3.41
3352 3619 4.254492 GGATGGTTAGAAGGACAGTTGTC 58.746 47.826 3.67 3.67 44.04 3.18
3353 3620 3.650942 TGGATGGTTAGAAGGACAGTTGT 59.349 43.478 0.00 0.00 0.00 3.32
3354 3621 4.286297 TGGATGGTTAGAAGGACAGTTG 57.714 45.455 0.00 0.00 0.00 3.16
3355 3622 4.506802 GGTTGGATGGTTAGAAGGACAGTT 60.507 45.833 0.00 0.00 0.00 3.16
3356 3623 3.009143 GGTTGGATGGTTAGAAGGACAGT 59.991 47.826 0.00 0.00 0.00 3.55
3357 3624 3.009033 TGGTTGGATGGTTAGAAGGACAG 59.991 47.826 0.00 0.00 0.00 3.51
3358 3625 2.983192 TGGTTGGATGGTTAGAAGGACA 59.017 45.455 0.00 0.00 0.00 4.02
3359 3626 3.244770 TGTGGTTGGATGGTTAGAAGGAC 60.245 47.826 0.00 0.00 0.00 3.85
3360 3627 2.983192 TGTGGTTGGATGGTTAGAAGGA 59.017 45.455 0.00 0.00 0.00 3.36
3361 3628 3.433306 TGTGGTTGGATGGTTAGAAGG 57.567 47.619 0.00 0.00 0.00 3.46
3362 3629 4.335416 ACATGTGGTTGGATGGTTAGAAG 58.665 43.478 0.00 0.00 0.00 2.85
3363 3630 4.380843 ACATGTGGTTGGATGGTTAGAA 57.619 40.909 0.00 0.00 0.00 2.10
3364 3631 4.380843 AACATGTGGTTGGATGGTTAGA 57.619 40.909 0.00 0.00 38.60 2.10
3378 3645 3.986442 TGTGATGTGAACCAACATGTG 57.014 42.857 0.00 0.00 40.87 3.21
3379 3646 3.243501 GCTTGTGATGTGAACCAACATGT 60.244 43.478 0.00 0.00 40.87 3.21
3380 3647 3.243468 TGCTTGTGATGTGAACCAACATG 60.243 43.478 0.00 0.00 40.87 3.21
3381 3648 2.957680 TGCTTGTGATGTGAACCAACAT 59.042 40.909 0.00 0.00 43.47 2.71
3382 3649 2.373224 TGCTTGTGATGTGAACCAACA 58.627 42.857 0.00 0.00 0.00 3.33
3383 3650 3.243501 ACATGCTTGTGATGTGAACCAAC 60.244 43.478 4.14 0.00 33.85 3.77
3384 3651 2.957680 ACATGCTTGTGATGTGAACCAA 59.042 40.909 4.14 0.00 33.85 3.67
3385 3652 2.585330 ACATGCTTGTGATGTGAACCA 58.415 42.857 4.14 0.00 33.85 3.67
3386 3653 3.753272 ACTACATGCTTGTGATGTGAACC 59.247 43.478 15.08 0.00 36.53 3.62
3387 3654 5.049474 TCAACTACATGCTTGTGATGTGAAC 60.049 40.000 15.08 0.00 36.53 3.18
3388 3655 5.062528 TCAACTACATGCTTGTGATGTGAA 58.937 37.500 15.08 2.14 36.53 3.18
3389 3656 4.640364 TCAACTACATGCTTGTGATGTGA 58.360 39.130 15.08 9.90 36.53 3.58
3390 3657 5.122711 TCATCAACTACATGCTTGTGATGTG 59.877 40.000 20.69 12.51 35.56 3.21
3391 3658 5.247862 TCATCAACTACATGCTTGTGATGT 58.752 37.500 20.69 10.07 35.56 3.06
3392 3659 5.806366 TCATCAACTACATGCTTGTGATG 57.194 39.130 15.08 16.71 36.53 3.07
3393 3660 5.706833 TGTTCATCAACTACATGCTTGTGAT 59.293 36.000 15.08 6.56 36.53 3.06
3394 3661 5.062528 TGTTCATCAACTACATGCTTGTGA 58.937 37.500 15.08 4.50 36.53 3.58
3395 3662 5.361135 TGTTCATCAACTACATGCTTGTG 57.639 39.130 15.08 7.81 36.53 3.33
3396 3663 5.946298 CATGTTCATCAACTACATGCTTGT 58.054 37.500 10.40 10.40 41.64 3.16
3402 3669 7.812690 ATGCATACATGTTCATCAACTACAT 57.187 32.000 2.30 0.00 34.35 2.29
3416 3683 6.832753 CATGAGACCCATCCATGCATACATG 61.833 48.000 0.00 4.43 42.51 3.21
3417 3684 2.712627 TGAGACCCATCCATGCATACAT 59.287 45.455 0.00 0.00 36.79 2.29
3418 3685 2.126057 TGAGACCCATCCATGCATACA 58.874 47.619 0.00 0.00 0.00 2.29
3419 3686 2.936919 TGAGACCCATCCATGCATAC 57.063 50.000 0.00 0.00 0.00 2.39
3420 3687 2.712627 ACATGAGACCCATCCATGCATA 59.287 45.455 0.00 0.00 37.17 3.14
3421 3688 1.497716 ACATGAGACCCATCCATGCAT 59.502 47.619 0.00 0.00 37.17 3.96
3422 3689 0.921166 ACATGAGACCCATCCATGCA 59.079 50.000 0.00 0.00 37.17 3.96
3423 3690 1.315690 CACATGAGACCCATCCATGC 58.684 55.000 0.00 0.00 37.17 4.06
3424 3691 1.315690 GCACATGAGACCCATCCATG 58.684 55.000 0.00 0.00 38.48 3.66
3425 3692 0.921166 TGCACATGAGACCCATCCAT 59.079 50.000 0.00 0.00 31.94 3.41
3426 3693 0.921166 ATGCACATGAGACCCATCCA 59.079 50.000 0.00 0.00 31.94 3.41
3427 3694 1.315690 CATGCACATGAGACCCATCC 58.684 55.000 4.57 0.00 41.20 3.51
3428 3695 1.945394 GACATGCACATGAGACCCATC 59.055 52.381 17.19 0.00 41.20 3.51
3429 3696 1.409241 GGACATGCACATGAGACCCAT 60.409 52.381 17.19 0.00 41.20 4.00
3430 3697 0.035152 GGACATGCACATGAGACCCA 60.035 55.000 17.19 0.00 41.20 4.51
3431 3698 0.254178 AGGACATGCACATGAGACCC 59.746 55.000 17.19 11.36 41.20 4.46
3432 3699 1.065926 TCAGGACATGCACATGAGACC 60.066 52.381 17.19 15.07 41.20 3.85
3433 3700 2.391616 TCAGGACATGCACATGAGAC 57.608 50.000 17.19 6.72 41.20 3.36
3434 3701 3.054948 TCATTCAGGACATGCACATGAGA 60.055 43.478 17.19 6.67 41.20 3.27
3435 3702 3.275999 TCATTCAGGACATGCACATGAG 58.724 45.455 17.19 0.00 41.20 2.90
3436 3703 3.353370 TCATTCAGGACATGCACATGA 57.647 42.857 17.19 4.22 41.20 3.07
3437 3704 4.649088 ATTCATTCAGGACATGCACATG 57.351 40.909 9.06 9.06 44.15 3.21
3438 3705 4.707934 TCAATTCATTCAGGACATGCACAT 59.292 37.500 0.00 0.00 0.00 3.21
3439 3706 4.080687 TCAATTCATTCAGGACATGCACA 58.919 39.130 0.00 0.00 0.00 4.57
3440 3707 4.707030 TCAATTCATTCAGGACATGCAC 57.293 40.909 0.00 0.00 0.00 4.57
3441 3708 5.533528 CCTATCAATTCATTCAGGACATGCA 59.466 40.000 0.00 0.00 0.00 3.96
3442 3709 5.766670 TCCTATCAATTCATTCAGGACATGC 59.233 40.000 0.00 0.00 0.00 4.06
3447 3714 9.040259 CCTATAGTCCTATCAATTCATTCAGGA 57.960 37.037 0.00 0.00 0.00 3.86
3448 3715 9.040259 TCCTATAGTCCTATCAATTCATTCAGG 57.960 37.037 0.00 0.00 0.00 3.86
3449 3716 9.868277 GTCCTATAGTCCTATCAATTCATTCAG 57.132 37.037 0.00 0.00 0.00 3.02
3450 3717 9.607333 AGTCCTATAGTCCTATCAATTCATTCA 57.393 33.333 0.00 0.00 0.00 2.57
3459 3726 9.579932 CATGCATATAGTCCTATAGTCCTATCA 57.420 37.037 0.00 5.54 32.18 2.15
3460 3727 9.581289 ACATGCATATAGTCCTATAGTCCTATC 57.419 37.037 0.00 1.44 32.18 2.08
3461 3728 9.581289 GACATGCATATAGTCCTATAGTCCTAT 57.419 37.037 0.00 11.21 32.18 2.57
3462 3729 7.715686 CGACATGCATATAGTCCTATAGTCCTA 59.284 40.741 0.00 0.00 32.18 2.94
3463 3730 6.544197 CGACATGCATATAGTCCTATAGTCCT 59.456 42.308 0.00 0.00 32.18 3.85
3464 3731 6.730175 CGACATGCATATAGTCCTATAGTCC 58.270 44.000 0.00 0.00 32.18 3.85
3465 3732 6.202937 GCGACATGCATATAGTCCTATAGTC 58.797 44.000 0.00 0.00 45.45 2.59
3466 3733 6.137794 GCGACATGCATATAGTCCTATAGT 57.862 41.667 0.00 0.00 45.45 2.12
3484 3751 6.765512 TCCATCTTTTTCATATGTATGCGACA 59.234 34.615 1.90 0.00 43.97 4.35
3485 3752 7.072030 GTCCATCTTTTTCATATGTATGCGAC 58.928 38.462 1.90 5.31 33.76 5.19
3486 3753 6.765512 TGTCCATCTTTTTCATATGTATGCGA 59.234 34.615 1.90 0.00 33.76 5.10
3487 3754 6.958255 TGTCCATCTTTTTCATATGTATGCG 58.042 36.000 1.90 0.00 33.76 4.73
3488 3755 9.754382 AATTGTCCATCTTTTTCATATGTATGC 57.246 29.630 1.90 0.00 33.76 3.14
3496 3763 9.927668 ACGATTTTAATTGTCCATCTTTTTCAT 57.072 25.926 0.00 0.00 0.00 2.57
3497 3764 9.405587 GACGATTTTAATTGTCCATCTTTTTCA 57.594 29.630 10.50 0.00 41.80 2.69
3498 3765 8.575454 CGACGATTTTAATTGTCCATCTTTTTC 58.425 33.333 14.33 0.00 43.76 2.29
3499 3766 7.061789 GCGACGATTTTAATTGTCCATCTTTTT 59.938 33.333 14.33 0.00 43.76 1.94
3500 3767 6.526674 GCGACGATTTTAATTGTCCATCTTTT 59.473 34.615 14.33 0.00 43.76 2.27
3501 3768 6.027749 GCGACGATTTTAATTGTCCATCTTT 58.972 36.000 14.33 0.00 43.76 2.52
3502 3769 5.123186 TGCGACGATTTTAATTGTCCATCTT 59.877 36.000 14.33 0.00 43.76 2.40
3503 3770 4.634004 TGCGACGATTTTAATTGTCCATCT 59.366 37.500 14.33 0.00 43.76 2.90
3504 3771 4.904116 TGCGACGATTTTAATTGTCCATC 58.096 39.130 14.33 7.11 43.76 3.51
3505 3772 4.955925 TGCGACGATTTTAATTGTCCAT 57.044 36.364 14.33 0.00 43.76 3.41
3506 3773 4.955925 ATGCGACGATTTTAATTGTCCA 57.044 36.364 14.33 13.27 43.76 4.02
3507 3774 5.569413 AGAATGCGACGATTTTAATTGTCC 58.431 37.500 14.33 9.42 43.76 4.02
3508 3775 8.767944 ATAAGAATGCGACGATTTTAATTGTC 57.232 30.769 11.29 11.29 43.40 3.18
3511 3778 9.659830 GGTTATAAGAATGCGACGATTTTAATT 57.340 29.630 0.00 0.00 0.00 1.40
3512 3779 8.287503 GGGTTATAAGAATGCGACGATTTTAAT 58.712 33.333 0.00 0.00 0.00 1.40
3513 3780 7.496591 AGGGTTATAAGAATGCGACGATTTTAA 59.503 33.333 0.00 0.00 0.00 1.52
3514 3781 6.987992 AGGGTTATAAGAATGCGACGATTTTA 59.012 34.615 0.00 0.00 0.00 1.52
3515 3782 5.820947 AGGGTTATAAGAATGCGACGATTTT 59.179 36.000 0.00 0.00 0.00 1.82
3516 3783 5.365619 AGGGTTATAAGAATGCGACGATTT 58.634 37.500 0.00 0.00 0.00 2.17
3517 3784 4.957296 AGGGTTATAAGAATGCGACGATT 58.043 39.130 0.00 0.00 0.00 3.34
3518 3785 4.602340 AGGGTTATAAGAATGCGACGAT 57.398 40.909 0.00 0.00 0.00 3.73
3519 3786 4.395959 AAGGGTTATAAGAATGCGACGA 57.604 40.909 0.00 0.00 0.00 4.20
3520 3787 6.477688 TCTTTAAGGGTTATAAGAATGCGACG 59.522 38.462 0.00 0.00 0.00 5.12
3521 3788 7.781548 TCTTTAAGGGTTATAAGAATGCGAC 57.218 36.000 0.00 0.00 0.00 5.19
3522 3789 8.262227 TCTTCTTTAAGGGTTATAAGAATGCGA 58.738 33.333 0.00 0.00 36.39 5.10
3523 3790 8.433421 TCTTCTTTAAGGGTTATAAGAATGCG 57.567 34.615 0.00 0.00 36.39 4.73
3552 3819 9.528489 TCTTAAAGGGTTGCACTTAATTCTATT 57.472 29.630 0.00 0.00 0.00 1.73
3553 3820 9.528489 TTCTTAAAGGGTTGCACTTAATTCTAT 57.472 29.630 0.00 0.00 0.00 1.98
3554 3821 8.927675 TTCTTAAAGGGTTGCACTTAATTCTA 57.072 30.769 0.00 0.00 0.00 2.10
3555 3822 7.724061 TCTTCTTAAAGGGTTGCACTTAATTCT 59.276 33.333 0.00 0.00 33.03 2.40
3556 3823 7.882179 TCTTCTTAAAGGGTTGCACTTAATTC 58.118 34.615 0.00 0.00 33.03 2.17
3557 3824 7.833285 TCTTCTTAAAGGGTTGCACTTAATT 57.167 32.000 0.00 0.00 33.03 1.40
3558 3825 7.833285 TTCTTCTTAAAGGGTTGCACTTAAT 57.167 32.000 0.00 0.00 33.03 1.40
3559 3826 7.648039 TTTCTTCTTAAAGGGTTGCACTTAA 57.352 32.000 0.00 0.00 33.03 1.85
3560 3827 7.648039 TTTTCTTCTTAAAGGGTTGCACTTA 57.352 32.000 0.00 0.00 33.03 2.24
3561 3828 6.538945 TTTTCTTCTTAAAGGGTTGCACTT 57.461 33.333 0.00 0.00 33.03 3.16
3562 3829 6.538945 TTTTTCTTCTTAAAGGGTTGCACT 57.461 33.333 0.00 0.00 33.03 4.40
3563 3830 6.983890 TCATTTTTCTTCTTAAAGGGTTGCAC 59.016 34.615 0.00 0.00 33.03 4.57
3564 3831 7.118496 TCATTTTTCTTCTTAAAGGGTTGCA 57.882 32.000 0.00 0.00 33.03 4.08
3565 3832 8.607441 ATTCATTTTTCTTCTTAAAGGGTTGC 57.393 30.769 0.00 0.00 33.03 4.17
3643 3910 8.012809 AAACTTCGTTTTTGCGAAATTTTTCTT 58.987 25.926 0.00 0.00 44.23 2.52
3644 3911 7.514805 AAACTTCGTTTTTGCGAAATTTTTCT 58.485 26.923 0.00 0.00 44.23 2.52
3645 3912 7.045868 GGAAACTTCGTTTTTGCGAAATTTTTC 60.046 33.333 8.57 12.04 45.77 2.29
3646 3913 6.739100 GGAAACTTCGTTTTTGCGAAATTTTT 59.261 30.769 8.57 5.78 45.77 1.94
3647 3914 6.091577 AGGAAACTTCGTTTTTGCGAAATTTT 59.908 30.769 8.57 7.71 45.77 1.82
3652 3919 3.768468 AGGAAACTTCGTTTTTGCGAA 57.232 38.095 1.08 1.08 46.78 4.70
3653 3920 4.571580 TCTTAGGAAACTTCGTTTTTGCGA 59.428 37.500 0.00 0.00 43.67 5.10
3654 3921 4.839796 TCTTAGGAAACTTCGTTTTTGCG 58.160 39.130 0.00 0.00 43.67 4.85
3655 3922 5.685954 CCTTCTTAGGAAACTTCGTTTTTGC 59.314 40.000 0.00 0.00 45.05 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.