Multiple sequence alignment - TraesCS6B01G160000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G160000 chr6B 100.000 5718 0 0 1 5718 163964435 163970152 0.000000e+00 10560.0
1 TraesCS6B01G160000 chr6B 92.473 93 4 3 3413 3504 520230349 520230439 4.650000e-26 130.0
2 TraesCS6B01G160000 chr6B 96.875 32 1 0 742 773 521522714 521522745 3.000000e-03 54.7
3 TraesCS6B01G160000 chr6B 100.000 28 0 0 749 776 592944199 592944226 1.000000e-02 52.8
4 TraesCS6B01G160000 chr6A 93.305 1404 56 15 805 2200 104048676 104050049 0.000000e+00 2037.0
5 TraesCS6B01G160000 chr6A 92.467 1301 69 8 2272 3552 104050046 104051337 0.000000e+00 1832.0
6 TraesCS6B01G160000 chr6A 88.212 1493 120 22 3591 5046 104051341 104052814 0.000000e+00 1731.0
7 TraesCS6B01G160000 chr6A 87.796 549 44 11 5051 5589 104052898 104053433 6.290000e-174 621.0
8 TraesCS6B01G160000 chr6D 92.357 1400 48 17 805 2200 86543262 86544606 0.000000e+00 1938.0
9 TraesCS6B01G160000 chr6D 88.307 1471 131 24 3602 5046 86545760 86547215 0.000000e+00 1725.0
10 TraesCS6B01G160000 chr6D 92.308 1157 72 9 2272 3416 86544603 86545754 0.000000e+00 1628.0
11 TraesCS6B01G160000 chr6D 86.772 756 85 14 1 745 457702439 457701688 0.000000e+00 828.0
12 TraesCS6B01G160000 chr6D 90.676 547 40 7 5051 5589 86547299 86547842 0.000000e+00 717.0
13 TraesCS6B01G160000 chr6D 95.122 41 2 0 5549 5589 83221517 83221477 1.330000e-06 65.8
14 TraesCS6B01G160000 chr6D 97.222 36 1 0 740 775 111079116 111079151 1.720000e-05 62.1
15 TraesCS6B01G160000 chr2D 88.742 755 75 6 1 745 499719421 499718667 0.000000e+00 915.0
16 TraesCS6B01G160000 chr2D 86.237 792 89 13 1 773 398456882 398457672 0.000000e+00 841.0
17 TraesCS6B01G160000 chr2D 91.579 95 3 2 3411 3504 473096454 473096364 6.010000e-25 126.0
18 TraesCS6B01G160000 chrUn 88.799 741 76 6 1 737 28751048 28750311 0.000000e+00 902.0
19 TraesCS6B01G160000 chrUn 90.385 104 10 0 3500 3603 15904024 15903921 2.780000e-28 137.0
20 TraesCS6B01G160000 chrUn 95.946 74 3 0 2207 2280 36436907 36436980 2.800000e-23 121.0
21 TraesCS6B01G160000 chr1B 87.183 749 87 8 1 745 268824435 268825178 0.000000e+00 843.0
22 TraesCS6B01G160000 chr7B 86.277 787 89 11 1 773 664358250 664357469 0.000000e+00 837.0
23 TraesCS6B01G160000 chr7B 92.784 97 7 0 3507 3603 162120908 162120812 2.150000e-29 141.0
24 TraesCS6B01G160000 chr7B 95.946 74 3 0 2207 2280 701408249 701408176 2.800000e-23 121.0
25 TraesCS6B01G160000 chr7B 95.652 69 3 0 2207 2275 405051389 405051321 1.680000e-20 111.0
26 TraesCS6B01G160000 chr4D 87.020 755 82 15 1 744 301508225 301508974 0.000000e+00 837.0
27 TraesCS6B01G160000 chr4D 100.000 29 0 0 740 768 319110931 319110903 3.000000e-03 54.7
28 TraesCS6B01G160000 chr2B 85.482 799 96 16 1 783 495928621 495927827 0.000000e+00 815.0
29 TraesCS6B01G160000 chr2B 86.551 751 88 12 1 745 602770363 602769620 0.000000e+00 815.0
30 TraesCS6B01G160000 chr7A 85.445 797 92 16 1 775 146912888 146912094 0.000000e+00 808.0
31 TraesCS6B01G160000 chr7A 92.708 96 4 3 3412 3506 475977272 475977179 9.990000e-28 135.0
32 TraesCS6B01G160000 chr7A 90.291 103 9 1 3506 3608 671454902 671454801 3.590000e-27 134.0
33 TraesCS6B01G160000 chr7A 94.444 72 4 0 2207 2278 682442531 682442460 1.680000e-20 111.0
34 TraesCS6B01G160000 chr2A 82.647 801 108 19 1 773 686010583 686009786 0.000000e+00 680.0
35 TraesCS6B01G160000 chr2A 92.105 76 5 1 2208 2283 196345051 196345125 7.840000e-19 106.0
36 TraesCS6B01G160000 chr5B 90.090 111 10 1 3494 3603 166379072 166379182 5.970000e-30 143.0
37 TraesCS6B01G160000 chr5B 91.398 93 7 1 3412 3503 472738613 472738521 6.010000e-25 126.0
38 TraesCS6B01G160000 chr5B 92.000 75 5 1 2207 2281 13722213 13722286 2.820000e-18 104.0
39 TraesCS6B01G160000 chr3D 95.556 90 3 1 3415 3503 528186792 528186703 5.970000e-30 143.0
40 TraesCS6B01G160000 chr3A 92.784 97 7 0 3507 3603 470095682 470095778 2.150000e-29 141.0
41 TraesCS6B01G160000 chr3A 90.291 103 10 0 3507 3609 25119424 25119322 9.990000e-28 135.0
42 TraesCS6B01G160000 chr1D 78.947 228 33 8 561 776 482020744 482020968 2.150000e-29 141.0
43 TraesCS6B01G160000 chr1D 84.211 133 16 5 3477 3606 400014139 400014269 2.160000e-24 124.0
44 TraesCS6B01G160000 chr1D 83.704 135 17 5 3475 3606 400014239 400014371 7.780000e-24 122.0
45 TraesCS6B01G160000 chr1D 95.714 70 3 0 2206 2275 209139346 209139277 4.680000e-21 113.0
46 TraesCS6B01G160000 chr4A 92.784 97 6 1 3507 3603 37060207 37060112 7.730000e-29 139.0
47 TraesCS6B01G160000 chr4A 93.548 93 2 1 3415 3503 236122216 236122124 9.990000e-28 135.0
48 TraesCS6B01G160000 chr4A 95.652 69 3 0 2207 2275 603447655 603447587 1.680000e-20 111.0
49 TraesCS6B01G160000 chr5A 92.708 96 5 2 3410 3504 128433802 128433896 2.780000e-28 137.0
50 TraesCS6B01G160000 chr5A 94.444 90 2 3 3413 3501 700362917 700362830 9.990000e-28 135.0
51 TraesCS6B01G160000 chr5A 91.489 94 4 3 3413 3504 55158977 55159068 6.010000e-25 126.0
52 TraesCS6B01G160000 chr3B 78.182 220 32 6 561 767 18655182 18655398 6.010000e-25 126.0
53 TraesCS6B01G160000 chr3B 77.143 245 35 12 561 788 124817632 124817392 7.780000e-24 122.0
54 TraesCS6B01G160000 chr1A 95.652 69 3 0 2207 2275 67222670 67222602 1.680000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G160000 chr6B 163964435 163970152 5717 False 10560.00 10560 100.000 1 5718 1 chr6B.!!$F1 5717
1 TraesCS6B01G160000 chr6A 104048676 104053433 4757 False 1555.25 2037 90.445 805 5589 4 chr6A.!!$F1 4784
2 TraesCS6B01G160000 chr6D 86543262 86547842 4580 False 1502.00 1938 90.912 805 5589 4 chr6D.!!$F2 4784
3 TraesCS6B01G160000 chr6D 457701688 457702439 751 True 828.00 828 86.772 1 745 1 chr6D.!!$R2 744
4 TraesCS6B01G160000 chr2D 499718667 499719421 754 True 915.00 915 88.742 1 745 1 chr2D.!!$R2 744
5 TraesCS6B01G160000 chr2D 398456882 398457672 790 False 841.00 841 86.237 1 773 1 chr2D.!!$F1 772
6 TraesCS6B01G160000 chrUn 28750311 28751048 737 True 902.00 902 88.799 1 737 1 chrUn.!!$R2 736
7 TraesCS6B01G160000 chr1B 268824435 268825178 743 False 843.00 843 87.183 1 745 1 chr1B.!!$F1 744
8 TraesCS6B01G160000 chr7B 664357469 664358250 781 True 837.00 837 86.277 1 773 1 chr7B.!!$R3 772
9 TraesCS6B01G160000 chr4D 301508225 301508974 749 False 837.00 837 87.020 1 744 1 chr4D.!!$F1 743
10 TraesCS6B01G160000 chr2B 495927827 495928621 794 True 815.00 815 85.482 1 783 1 chr2B.!!$R1 782
11 TraesCS6B01G160000 chr2B 602769620 602770363 743 True 815.00 815 86.551 1 745 1 chr2B.!!$R2 744
12 TraesCS6B01G160000 chr7A 146912094 146912888 794 True 808.00 808 85.445 1 775 1 chr7A.!!$R1 774
13 TraesCS6B01G160000 chr2A 686009786 686010583 797 True 680.00 680 82.647 1 773 1 chr2A.!!$R1 772

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
795 842 0.110238 CCCACAATTTGCTCGACGTG 60.110 55.0 0.00 0.00 0.00 4.49 F
796 843 0.586319 CCACAATTTGCTCGACGTGT 59.414 50.0 0.00 0.00 0.00 4.49 F
1021 1073 0.682855 CACACAACACACACCCCCTT 60.683 55.0 0.00 0.00 0.00 3.95 F
2761 2835 1.149148 GGCCAGAAACGAGAACAGAC 58.851 55.0 0.00 0.00 0.00 3.51 F
4189 4301 0.476771 ACTGTTATTATGCCCCGGGG 59.523 55.0 37.09 37.09 38.57 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2360 2433 0.798776 GGACAGTGACAGAATTGCGG 59.201 55.000 0.00 0.00 0.00 5.69 R
2362 2435 3.503363 TGAATGGACAGTGACAGAATTGC 59.497 43.478 0.00 0.00 0.00 3.56 R
2943 3017 0.169672 CCTTGCACAATGGAAGCTCG 59.830 55.000 4.68 0.00 43.32 5.03 R
4204 4316 0.107214 GGCTGGCCTGTAGCATGTTA 60.107 55.000 14.91 0.00 46.50 2.41 R
5216 5444 0.402121 GGGACAGGTGAAGCTTTCCT 59.598 55.000 15.45 15.45 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 4.072088 CGGAACAACGACCGCTGC 62.072 66.667 0.00 0.00 42.55 5.25
106 107 1.149401 TGATGGACCAACACGGCAA 59.851 52.632 0.00 0.00 39.03 4.52
210 212 5.010213 GTCCATTTTGTACCTTGGCAAACTA 59.990 40.000 0.00 0.00 34.77 2.24
240 242 4.409218 CGGGCGTCGACGAAGGAA 62.409 66.667 39.74 0.00 43.02 3.36
292 294 4.152964 CAGCTAGCTGCCCTGCGA 62.153 66.667 30.62 0.00 44.23 5.10
351 353 2.347490 GAGGCGGCTTCTTGGTCA 59.653 61.111 14.76 0.00 0.00 4.02
355 357 3.068881 CGGCTTCTTGGTCAGGGA 58.931 61.111 0.00 0.00 0.00 4.20
358 360 2.035442 GCTTCTTGGTCAGGGACGC 61.035 63.158 0.00 0.00 32.65 5.19
362 364 2.525629 TTGGTCAGGGACGCCTGA 60.526 61.111 7.61 7.61 43.53 3.86
498 514 1.582610 GAGTCGCCGGCAAAAATGGA 61.583 55.000 28.98 10.87 0.00 3.41
503 519 2.647875 CGGCAAAAATGGACGGCA 59.352 55.556 0.00 0.00 31.77 5.69
553 575 0.547471 TGCTGTTGGATGGGGAGAGA 60.547 55.000 0.00 0.00 0.00 3.10
565 587 0.257039 GGGAGAGACCAATGTGCCAT 59.743 55.000 0.00 0.00 41.20 4.40
594 617 3.090532 CCCGGGGAAGGAGAAGGG 61.091 72.222 14.71 0.00 0.00 3.95
648 672 2.490115 ACGCAAATCCGGCTCAAAAATA 59.510 40.909 0.00 0.00 0.00 1.40
662 686 3.945285 TCAAAAATAGACCGAGAATGGGC 59.055 43.478 0.00 0.00 37.58 5.36
682 706 3.023950 CCCGCGGACGAAAACAAA 58.976 55.556 30.73 0.00 43.93 2.83
683 707 1.369568 CCCGCGGACGAAAACAAAC 60.370 57.895 30.73 0.00 43.93 2.93
704 731 1.669760 GCATCCGTTTGGGTCGACA 60.670 57.895 18.91 0.00 37.00 4.35
731 758 1.278637 CGTCTTTTGTGTCCGCACC 59.721 57.895 0.00 0.00 44.65 5.01
733 760 1.144276 TCTTTTGTGTCCGCACCGA 59.856 52.632 0.00 0.00 44.65 4.69
769 816 2.798148 GATCGCCCCGTTGGAGTTGT 62.798 60.000 0.00 0.00 35.07 3.32
775 822 2.148768 CCCCGTTGGAGTTGTTCTAAC 58.851 52.381 0.00 0.00 42.15 2.34
779 826 2.485835 CGTTGGAGTTGTTCTAACCCCA 60.486 50.000 0.00 0.00 42.48 4.96
783 830 3.139397 TGGAGTTGTTCTAACCCCACAAT 59.861 43.478 0.00 0.00 33.15 2.71
784 831 4.149598 GGAGTTGTTCTAACCCCACAATT 58.850 43.478 0.00 0.00 33.15 2.32
785 832 4.587262 GGAGTTGTTCTAACCCCACAATTT 59.413 41.667 0.00 0.00 33.15 1.82
786 833 5.508994 GGAGTTGTTCTAACCCCACAATTTG 60.509 44.000 0.00 0.00 33.15 2.32
787 834 4.055360 GTTGTTCTAACCCCACAATTTGC 58.945 43.478 0.00 0.00 33.15 3.68
788 835 3.571590 TGTTCTAACCCCACAATTTGCT 58.428 40.909 0.00 0.00 0.00 3.91
789 836 3.572255 TGTTCTAACCCCACAATTTGCTC 59.428 43.478 0.00 0.00 0.00 4.26
790 837 2.432444 TCTAACCCCACAATTTGCTCG 58.568 47.619 0.00 0.00 0.00 5.03
791 838 2.039216 TCTAACCCCACAATTTGCTCGA 59.961 45.455 0.00 0.00 0.00 4.04
792 839 0.958822 AACCCCACAATTTGCTCGAC 59.041 50.000 0.00 0.00 0.00 4.20
793 840 1.234615 ACCCCACAATTTGCTCGACG 61.235 55.000 0.00 0.00 0.00 5.12
794 841 1.234615 CCCCACAATTTGCTCGACGT 61.235 55.000 0.00 0.00 0.00 4.34
795 842 0.110238 CCCACAATTTGCTCGACGTG 60.110 55.000 0.00 0.00 0.00 4.49
796 843 0.586319 CCACAATTTGCTCGACGTGT 59.414 50.000 0.00 0.00 0.00 4.49
797 844 1.398451 CCACAATTTGCTCGACGTGTC 60.398 52.381 0.00 0.00 0.00 3.67
815 862 1.197036 GTCGATCGATCTATCACCGCA 59.803 52.381 22.50 0.00 0.00 5.69
945 992 3.964688 TCCCCTAATTAATCAGCTCGTCA 59.035 43.478 0.00 0.00 0.00 4.35
953 1000 0.734253 ATCAGCTCGTCACGCACTTC 60.734 55.000 0.00 0.00 0.00 3.01
1002 1049 3.091022 CGCAAAGCCGCAAACGAC 61.091 61.111 0.00 0.00 43.93 4.34
1003 1050 2.025441 GCAAAGCCGCAAACGACA 59.975 55.556 0.00 0.00 43.93 4.35
1004 1051 2.292916 GCAAAGCCGCAAACGACAC 61.293 57.895 0.00 0.00 43.93 3.67
1005 1052 1.063327 CAAAGCCGCAAACGACACA 59.937 52.632 0.00 0.00 43.93 3.72
1006 1053 1.063488 AAAGCCGCAAACGACACAC 59.937 52.632 0.00 0.00 43.93 3.82
1007 1054 1.649390 AAAGCCGCAAACGACACACA 61.649 50.000 0.00 0.00 43.93 3.72
1021 1073 0.682855 CACACAACACACACCCCCTT 60.683 55.000 0.00 0.00 0.00 3.95
1071 1123 2.288643 GCCCATCCTCCTCCTCCT 59.711 66.667 0.00 0.00 0.00 3.69
1105 1157 4.179579 GGCATTTCCGCGAGCACC 62.180 66.667 8.23 0.00 0.00 5.01
1106 1158 4.179579 GCATTTCCGCGAGCACCC 62.180 66.667 8.23 0.00 0.00 4.61
1107 1159 2.436646 CATTTCCGCGAGCACCCT 60.437 61.111 8.23 0.00 0.00 4.34
1108 1160 2.125106 ATTTCCGCGAGCACCCTC 60.125 61.111 8.23 0.00 34.66 4.30
1857 1920 9.381033 CATTATTATCAGTTTTTGGCAATTCCA 57.619 29.630 0.00 0.00 44.85 3.53
2041 2108 9.097257 ACCAACTTTTTGTTTCTATTTGTGATG 57.903 29.630 0.00 0.00 36.63 3.07
2112 2181 3.070878 TGTGGTCTGCTGTTGATAAGTCA 59.929 43.478 0.00 0.00 0.00 3.41
2152 2221 4.058124 TGCAACATCATAGATACTTCGCC 58.942 43.478 0.00 0.00 0.00 5.54
2203 2274 9.926751 GTTTTTACTTGTTCTGTTTAGTACTCC 57.073 33.333 0.00 0.00 0.00 3.85
2204 2275 8.667076 TTTTACTTGTTCTGTTTAGTACTCCC 57.333 34.615 0.00 0.00 0.00 4.30
2205 2276 4.879598 ACTTGTTCTGTTTAGTACTCCCG 58.120 43.478 0.00 0.00 0.00 5.14
2206 2277 4.586001 ACTTGTTCTGTTTAGTACTCCCGA 59.414 41.667 0.00 0.00 0.00 5.14
2207 2278 5.069516 ACTTGTTCTGTTTAGTACTCCCGAA 59.930 40.000 0.00 0.00 0.00 4.30
2208 2279 5.534207 TGTTCTGTTTAGTACTCCCGAAA 57.466 39.130 0.00 0.00 0.00 3.46
2209 2280 6.105397 TGTTCTGTTTAGTACTCCCGAAAT 57.895 37.500 0.00 0.00 0.00 2.17
2210 2281 7.230849 TGTTCTGTTTAGTACTCCCGAAATA 57.769 36.000 0.00 0.00 0.00 1.40
2211 2282 7.844009 TGTTCTGTTTAGTACTCCCGAAATAT 58.156 34.615 0.00 0.00 0.00 1.28
2212 2283 8.970020 TGTTCTGTTTAGTACTCCCGAAATATA 58.030 33.333 0.00 0.00 0.00 0.86
2213 2284 9.807649 GTTCTGTTTAGTACTCCCGAAATATAA 57.192 33.333 0.00 0.00 0.00 0.98
2215 2286 9.412460 TCTGTTTAGTACTCCCGAAATATAAGA 57.588 33.333 0.00 0.00 0.00 2.10
2216 2287 9.680315 CTGTTTAGTACTCCCGAAATATAAGAG 57.320 37.037 0.00 0.00 0.00 2.85
2217 2288 9.193806 TGTTTAGTACTCCCGAAATATAAGAGT 57.806 33.333 0.00 0.00 40.70 3.24
2218 2289 9.460906 GTTTAGTACTCCCGAAATATAAGAGTG 57.539 37.037 0.00 0.00 38.25 3.51
2219 2290 8.757982 TTAGTACTCCCGAAATATAAGAGTGT 57.242 34.615 0.00 0.00 38.25 3.55
2220 2291 7.657023 AGTACTCCCGAAATATAAGAGTGTT 57.343 36.000 0.00 0.00 38.25 3.32
2221 2292 8.075761 AGTACTCCCGAAATATAAGAGTGTTT 57.924 34.615 0.00 0.00 38.25 2.83
2222 2293 9.193806 AGTACTCCCGAAATATAAGAGTGTTTA 57.806 33.333 0.00 0.00 38.25 2.01
2223 2294 9.460906 GTACTCCCGAAATATAAGAGTGTTTAG 57.539 37.037 0.00 0.00 38.25 1.85
2224 2295 8.302515 ACTCCCGAAATATAAGAGTGTTTAGA 57.697 34.615 0.00 0.00 36.48 2.10
2225 2296 8.925338 ACTCCCGAAATATAAGAGTGTTTAGAT 58.075 33.333 0.00 0.00 36.48 1.98
2226 2297 9.413048 CTCCCGAAATATAAGAGTGTTTAGATC 57.587 37.037 0.00 0.00 0.00 2.75
2227 2298 8.920174 TCCCGAAATATAAGAGTGTTTAGATCA 58.080 33.333 0.00 0.00 0.00 2.92
2228 2299 8.979574 CCCGAAATATAAGAGTGTTTAGATCAC 58.020 37.037 0.00 0.00 36.22 3.06
2229 2300 9.751542 CCGAAATATAAGAGTGTTTAGATCACT 57.248 33.333 0.00 0.00 46.86 3.41
2269 2340 6.085555 TGCTCTTATATGTCTTTACGGAGG 57.914 41.667 0.00 0.00 0.00 4.30
2270 2341 5.010719 TGCTCTTATATGTCTTTACGGAGGG 59.989 44.000 0.00 0.00 0.00 4.30
2271 2342 5.243283 GCTCTTATATGTCTTTACGGAGGGA 59.757 44.000 0.00 0.00 0.00 4.20
2272 2343 6.570764 GCTCTTATATGTCTTTACGGAGGGAG 60.571 46.154 0.00 0.00 0.00 4.30
2273 2344 6.371278 TCTTATATGTCTTTACGGAGGGAGT 58.629 40.000 0.00 0.00 0.00 3.85
2274 2345 7.520798 TCTTATATGTCTTTACGGAGGGAGTA 58.479 38.462 0.00 0.00 0.00 2.59
2325 2398 6.829849 ACATCATTTTCCCAACTTGAAATGT 58.170 32.000 11.39 0.00 39.37 2.71
2360 2433 2.348872 CGGCACATGCTCGTTATGATTC 60.349 50.000 3.48 0.00 41.70 2.52
2362 2435 2.348872 GCACATGCTCGTTATGATTCCG 60.349 50.000 0.00 0.00 38.21 4.30
2376 2449 2.743664 TGATTCCGCAATTCTGTCACTG 59.256 45.455 0.00 0.00 0.00 3.66
2484 2557 2.483877 TGCTGTTGATAGGTCGCTTTTG 59.516 45.455 0.00 0.00 0.00 2.44
2586 2659 6.421405 CATGTTTTTGCCTTTCTTGTTTAGC 58.579 36.000 0.00 0.00 0.00 3.09
2587 2660 5.729510 TGTTTTTGCCTTTCTTGTTTAGCT 58.270 33.333 0.00 0.00 0.00 3.32
2591 2664 5.432885 TTGCCTTTCTTGTTTAGCTGTAC 57.567 39.130 0.00 0.00 0.00 2.90
2630 2703 4.639310 AGCAAGCCTACATCATTTTCTCTG 59.361 41.667 0.00 0.00 0.00 3.35
2632 2705 5.298777 GCAAGCCTACATCATTTTCTCTGAT 59.701 40.000 0.00 0.00 33.65 2.90
2638 2711 7.861372 GCCTACATCATTTTCTCTGATTGATTG 59.139 37.037 0.00 0.00 31.00 2.67
2647 2721 6.892310 TTCTCTGATTGATTGTATGTCGTG 57.108 37.500 0.00 0.00 0.00 4.35
2662 2736 8.797266 TGTATGTCGTGATATTAAGACACATC 57.203 34.615 16.34 10.99 44.90 3.06
2721 2795 7.524717 ACTATTAGCACCATGTTGAGTTTTT 57.475 32.000 0.00 0.00 0.00 1.94
2722 2796 8.630054 ACTATTAGCACCATGTTGAGTTTTTA 57.370 30.769 0.00 0.00 0.00 1.52
2724 2798 4.584327 AGCACCATGTTGAGTTTTTACC 57.416 40.909 0.00 0.00 0.00 2.85
2725 2799 4.215109 AGCACCATGTTGAGTTTTTACCT 58.785 39.130 0.00 0.00 0.00 3.08
2761 2835 1.149148 GGCCAGAAACGAGAACAGAC 58.851 55.000 0.00 0.00 0.00 3.51
2831 2905 8.648557 TGAGAAGTTATGTTATCCTTCAATCG 57.351 34.615 0.00 0.00 36.60 3.34
2879 2953 6.678900 GCATGTGGAATGTTCTTCAGGTAATC 60.679 42.308 0.00 0.00 0.00 1.75
2892 2966 6.485313 TCTTCAGGTAATCGTGTGTCAAAATT 59.515 34.615 0.00 0.00 0.00 1.82
2943 3017 8.968242 GTTAAGGATGTCATGAAGAAACAAAAC 58.032 33.333 0.00 0.00 0.00 2.43
3093 3167 2.813908 CGGCGTACACTCAAGGCC 60.814 66.667 0.00 0.00 42.99 5.19
3096 3170 1.004918 GCGTACACTCAAGGCCAGT 60.005 57.895 5.01 0.00 0.00 4.00
3171 3245 6.605194 TCTCTGCTCAGTCTTTATGTATGTCT 59.395 38.462 0.00 0.00 0.00 3.41
3317 3391 6.144563 GCATAAAGAGCCTTTTGAAACAAGAC 59.855 38.462 5.65 0.00 0.00 3.01
3382 3463 6.687081 TTTCTTTCTTTCCTCGCTGTTTAA 57.313 33.333 0.00 0.00 0.00 1.52
3383 3464 5.668558 TCTTTCTTTCCTCGCTGTTTAAC 57.331 39.130 0.00 0.00 0.00 2.01
3489 3583 8.934023 ATAAAGTTGAGACACTTATTTTGGGA 57.066 30.769 0.00 0.00 35.87 4.37
3490 3584 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
3495 3589 3.581332 AGACACTTATTTTGGGACGGAGA 59.419 43.478 0.00 0.00 0.00 3.71
3508 3602 3.690628 GGGACGGAGAGAGTATATGCTAC 59.309 52.174 0.00 0.00 0.00 3.58
3509 3603 4.325119 GGACGGAGAGAGTATATGCTACA 58.675 47.826 0.00 0.00 0.00 2.74
3516 3610 3.422796 AGAGTATATGCTACACCCTCCG 58.577 50.000 0.00 0.00 0.00 4.63
3517 3611 3.074094 AGAGTATATGCTACACCCTCCGA 59.926 47.826 0.00 0.00 0.00 4.55
3529 3623 3.583086 ACACCCTCCGATCCATAATAAGG 59.417 47.826 0.00 0.00 0.00 2.69
3552 3646 4.279659 GTCGCAGTTTTGAACTAAGGTTG 58.720 43.478 0.00 0.00 40.46 3.77
3553 3647 4.034742 GTCGCAGTTTTGAACTAAGGTTGA 59.965 41.667 0.00 0.00 40.46 3.18
3554 3648 4.636648 TCGCAGTTTTGAACTAAGGTTGAA 59.363 37.500 0.00 0.00 40.46 2.69
3555 3649 4.733405 CGCAGTTTTGAACTAAGGTTGAAC 59.267 41.667 0.00 0.00 40.46 3.18
3556 3650 5.448632 CGCAGTTTTGAACTAAGGTTGAACT 60.449 40.000 0.00 0.00 40.46 3.01
3557 3651 6.238266 CGCAGTTTTGAACTAAGGTTGAACTA 60.238 38.462 0.00 0.00 40.46 2.24
3558 3652 7.477494 GCAGTTTTGAACTAAGGTTGAACTAA 58.523 34.615 0.00 0.00 40.46 2.24
3559 3653 7.431376 GCAGTTTTGAACTAAGGTTGAACTAAC 59.569 37.037 0.00 0.00 40.46 2.34
3575 3669 9.797556 GTTGAACTAACCTTATTTCAAAACTGT 57.202 29.630 10.49 0.00 41.11 3.55
3576 3670 9.796120 TTGAACTAACCTTATTTCAAAACTGTG 57.204 29.630 7.68 0.00 38.51 3.66
3577 3671 9.179909 TGAACTAACCTTATTTCAAAACTGTGA 57.820 29.630 0.00 0.00 31.88 3.58
3578 3672 9.447040 GAACTAACCTTATTTCAAAACTGTGAC 57.553 33.333 0.00 0.00 0.00 3.67
3579 3673 8.514330 ACTAACCTTATTTCAAAACTGTGACA 57.486 30.769 0.00 0.00 0.00 3.58
3580 3674 8.403236 ACTAACCTTATTTCAAAACTGTGACAC 58.597 33.333 0.00 0.00 0.00 3.67
3581 3675 7.404671 AACCTTATTTCAAAACTGTGACACT 57.595 32.000 7.20 0.00 0.00 3.55
3582 3676 7.404671 ACCTTATTTCAAAACTGTGACACTT 57.595 32.000 7.20 0.00 0.00 3.16
3583 3677 7.257722 ACCTTATTTCAAAACTGTGACACTTG 58.742 34.615 7.20 3.18 0.00 3.16
3584 3678 7.093945 ACCTTATTTCAAAACTGTGACACTTGT 60.094 33.333 7.20 3.20 0.00 3.16
3585 3679 7.759433 CCTTATTTCAAAACTGTGACACTTGTT 59.241 33.333 7.20 9.09 0.00 2.83
3586 3680 9.139174 CTTATTTCAAAACTGTGACACTTGTTT 57.861 29.630 17.99 17.99 34.59 2.83
3587 3681 7.961325 ATTTCAAAACTGTGACACTTGTTTT 57.039 28.000 23.96 23.96 41.44 2.43
3647 3741 7.100458 ACCTATAAATGTGTCATTTCTTGCC 57.900 36.000 10.35 0.00 0.00 4.52
3669 3763 8.251750 TGCCATATATGCTTAAATTACTCGTC 57.748 34.615 7.24 0.00 0.00 4.20
3738 3832 7.741785 TCTGTTATAAGTCCAGTTTCCTTTGA 58.258 34.615 2.54 0.00 0.00 2.69
3802 3896 6.332630 AGTTGAATCTTTGGTGTTGAACAAG 58.667 36.000 0.00 0.00 0.00 3.16
3810 3904 4.695217 TGGTGTTGAACAAGTGAACTTC 57.305 40.909 0.00 0.00 33.11 3.01
3811 3905 4.331968 TGGTGTTGAACAAGTGAACTTCT 58.668 39.130 0.00 0.00 33.11 2.85
3812 3906 4.155826 TGGTGTTGAACAAGTGAACTTCTG 59.844 41.667 0.00 0.00 33.11 3.02
3813 3907 4.098416 GTGTTGAACAAGTGAACTTCTGC 58.902 43.478 0.00 0.00 33.11 4.26
3842 3937 7.335627 CAATGGTTGTCTTCCACCTAGTAATA 58.664 38.462 0.00 0.00 37.81 0.98
3972 4084 6.042093 AGAGAGTATTGTTGTCAGTCCTTGAA 59.958 38.462 0.00 0.00 37.61 2.69
3984 4096 4.162320 TCAGTCCTTGAACTGTTCTTGTCT 59.838 41.667 20.18 9.98 45.57 3.41
3992 4104 3.199880 ACTGTTCTTGTCTTGTCCCAG 57.800 47.619 0.00 0.00 0.00 4.45
4036 4148 2.945668 GGGTAATGCTGATTCTGTGGAC 59.054 50.000 0.00 0.00 0.00 4.02
4102 4214 2.032178 GTGGTGTTTTGAGCTGTCACTC 59.968 50.000 0.00 0.00 37.19 3.51
4110 4222 3.372440 TGAGCTGTCACTCAGGAGATA 57.628 47.619 2.79 0.00 41.72 1.98
4163 4275 0.602562 GCCTGGTGCATTGCTTGTTA 59.397 50.000 10.49 0.00 40.77 2.41
4166 4278 2.353011 CCTGGTGCATTGCTTGTTAAGG 60.353 50.000 10.49 4.87 0.00 2.69
4173 4285 4.022416 TGCATTGCTTGTTAAGGGTAACTG 60.022 41.667 10.49 0.00 40.35 3.16
4176 4288 6.294286 GCATTGCTTGTTAAGGGTAACTGTTA 60.294 38.462 0.16 0.00 40.35 2.41
4185 4297 4.448720 AGGGTAACTGTTATTATGCCCC 57.551 45.455 15.72 13.75 35.62 5.80
4189 4301 0.476771 ACTGTTATTATGCCCCGGGG 59.523 55.000 37.09 37.09 38.57 5.73
4196 4308 1.790635 TTATGCCCCGGGGTTTGTGA 61.791 55.000 39.80 18.76 37.65 3.58
4202 4314 1.064314 CCCCGGGGTTTGTGATTCATA 60.064 52.381 33.25 0.00 0.00 2.15
4204 4316 3.295973 CCCGGGGTTTGTGATTCATAAT 58.704 45.455 14.71 0.00 0.00 1.28
4219 4331 6.430925 TGATTCATAATAACATGCTACAGGCC 59.569 38.462 0.00 0.00 40.92 5.19
4231 4343 0.403655 TACAGGCCAGCCACATTCAA 59.596 50.000 12.03 0.00 38.92 2.69
4236 4348 0.743097 GCCAGCCACATTCAAGATCC 59.257 55.000 0.00 0.00 0.00 3.36
4245 4357 4.275810 CACATTCAAGATCCCAATGACCT 58.724 43.478 13.26 0.00 32.73 3.85
4248 4360 2.187958 TCAAGATCCCAATGACCTCGT 58.812 47.619 0.00 0.00 0.00 4.18
4252 4364 4.180377 AGATCCCAATGACCTCGTACTA 57.820 45.455 0.00 0.00 0.00 1.82
4256 4368 2.102420 CCCAATGACCTCGTACTATGCA 59.898 50.000 0.00 0.00 0.00 3.96
4259 4371 4.433615 CAATGACCTCGTACTATGCACTT 58.566 43.478 0.00 0.00 0.00 3.16
4268 4380 5.779922 TCGTACTATGCACTTTGTTTCTCT 58.220 37.500 0.00 0.00 0.00 3.10
4273 4385 2.833794 TGCACTTTGTTTCTCTAGCGT 58.166 42.857 0.00 0.00 0.00 5.07
4277 4389 5.468746 TGCACTTTGTTTCTCTAGCGTATTT 59.531 36.000 0.00 0.00 0.00 1.40
4278 4390 6.017440 TGCACTTTGTTTCTCTAGCGTATTTT 60.017 34.615 0.00 0.00 0.00 1.82
4321 4433 4.223032 TCCCTCAAGATCCAGAGTACAAAC 59.777 45.833 10.19 0.00 0.00 2.93
4370 4482 7.741027 AGAATGTGGCATCATCTTGTTATAG 57.259 36.000 0.00 0.00 0.00 1.31
4409 4543 5.173774 TCTGTTCTTTTGCATGTGTTCTC 57.826 39.130 0.00 0.00 0.00 2.87
4422 4556 3.411446 TGTGTTCTCTTGGTATGCTTGG 58.589 45.455 0.00 0.00 0.00 3.61
4425 4559 4.392138 GTGTTCTCTTGGTATGCTTGGTAC 59.608 45.833 0.00 0.00 0.00 3.34
4441 4575 1.249407 GTACGATCTAGAGCCCCCTG 58.751 60.000 1.64 0.00 0.00 4.45
4531 4665 1.487976 GCCATGGAGAAGATGGAGTCA 59.512 52.381 18.40 0.00 42.81 3.41
4648 4784 2.558359 ACCAATTCTTTGTGTAGCCTGC 59.442 45.455 0.00 0.00 0.00 4.85
4673 4809 2.159296 GGTTCTTTGTGGTTCTTTGCGT 60.159 45.455 0.00 0.00 0.00 5.24
4727 4863 4.354587 TCTTGTGAATCTGATCGACATCG 58.645 43.478 0.00 0.00 41.45 3.84
4735 4871 5.948992 ATCTGATCGACATCGTCTTATCA 57.051 39.130 0.54 2.67 40.80 2.15
4750 4886 5.457148 CGTCTTATCACTGTTGTAGCATCTC 59.543 44.000 0.00 0.00 0.00 2.75
4755 4891 5.316327 TCACTGTTGTAGCATCTCTAGTG 57.684 43.478 0.00 0.00 0.00 2.74
4756 4892 5.010282 TCACTGTTGTAGCATCTCTAGTGA 58.990 41.667 0.00 0.00 30.04 3.41
4757 4893 5.654209 TCACTGTTGTAGCATCTCTAGTGAT 59.346 40.000 1.36 1.36 28.54 3.06
4758 4894 6.828785 TCACTGTTGTAGCATCTCTAGTGATA 59.171 38.462 6.97 0.00 28.54 2.15
4759 4895 7.503902 TCACTGTTGTAGCATCTCTAGTGATAT 59.496 37.037 6.97 2.69 28.54 1.63
4761 4897 8.700051 ACTGTTGTAGCATCTCTAGTGATATTT 58.300 33.333 6.97 0.00 0.00 1.40
4762 4898 8.877808 TGTTGTAGCATCTCTAGTGATATTTG 57.122 34.615 6.97 0.00 0.00 2.32
4776 4916 7.239166 AGTGATATTTGAAGAGTATGCGTTG 57.761 36.000 0.00 0.00 0.00 4.10
4781 4921 3.953712 TGAAGAGTATGCGTTGGAAGA 57.046 42.857 0.00 0.00 0.00 2.87
4789 4929 0.034337 TGCGTTGGAAGACACTACCC 59.966 55.000 0.00 0.00 0.00 3.69
4790 4930 0.672711 GCGTTGGAAGACACTACCCC 60.673 60.000 0.00 0.00 0.00 4.95
4791 4931 0.036671 CGTTGGAAGACACTACCCCC 60.037 60.000 0.00 0.00 0.00 5.40
4792 4932 1.061546 GTTGGAAGACACTACCCCCA 58.938 55.000 0.00 0.00 0.00 4.96
4793 4933 1.003233 GTTGGAAGACACTACCCCCAG 59.997 57.143 0.00 0.00 0.00 4.45
4796 4936 0.036294 GAAGACACTACCCCCAGCAC 60.036 60.000 0.00 0.00 0.00 4.40
4800 4940 2.122144 ACTACCCCCAGCACCACA 60.122 61.111 0.00 0.00 0.00 4.17
4812 4952 1.691219 CACCACACCATAGCCCCTT 59.309 57.895 0.00 0.00 0.00 3.95
4843 4984 6.659242 AGTGTTTTGTTAGAGGAATATGTGGG 59.341 38.462 0.00 0.00 0.00 4.61
4845 4986 6.657541 TGTTTTGTTAGAGGAATATGTGGGAC 59.342 38.462 0.00 0.00 0.00 4.46
4850 4991 2.173569 AGAGGAATATGTGGGACCTTGC 59.826 50.000 0.00 0.00 0.00 4.01
4852 4993 2.582636 AGGAATATGTGGGACCTTGCTT 59.417 45.455 0.00 0.00 0.00 3.91
4864 5005 1.134175 ACCTTGCTTGTTGGTTGTTCG 59.866 47.619 0.00 0.00 0.00 3.95
4872 5013 1.208535 TGTTGGTTGTTCGAGTGGAGT 59.791 47.619 0.00 0.00 0.00 3.85
4874 5015 2.234300 TGGTTGTTCGAGTGGAGTTC 57.766 50.000 0.00 0.00 0.00 3.01
4875 5016 1.760613 TGGTTGTTCGAGTGGAGTTCT 59.239 47.619 0.00 0.00 0.00 3.01
4876 5017 2.169769 TGGTTGTTCGAGTGGAGTTCTT 59.830 45.455 0.00 0.00 0.00 2.52
4877 5018 3.203716 GGTTGTTCGAGTGGAGTTCTTT 58.796 45.455 0.00 0.00 0.00 2.52
4878 5019 3.626217 GGTTGTTCGAGTGGAGTTCTTTT 59.374 43.478 0.00 0.00 0.00 2.27
4885 5026 4.570772 TCGAGTGGAGTTCTTTTTGAAGTG 59.429 41.667 0.00 0.00 38.36 3.16
4903 5044 8.801715 TTGAAGTGAAATAAATCTTGAGTTGC 57.198 30.769 0.00 0.00 0.00 4.17
4905 5046 6.272822 AGTGAAATAAATCTTGAGTTGCCC 57.727 37.500 0.00 0.00 0.00 5.36
4907 5048 6.267471 AGTGAAATAAATCTTGAGTTGCCCAA 59.733 34.615 0.00 0.00 0.00 4.12
4918 5059 6.721208 TCTTGAGTTGCCCAATCTTATTTTCT 59.279 34.615 0.00 0.00 0.00 2.52
4926 5067 8.491331 TGCCCAATCTTATTTTCTTTTTATGC 57.509 30.769 0.00 0.00 0.00 3.14
4928 5069 7.277760 GCCCAATCTTATTTTCTTTTTATGCGT 59.722 33.333 0.00 0.00 0.00 5.24
4933 5074 8.514136 TCTTATTTTCTTTTTATGCGTGTTGG 57.486 30.769 0.00 0.00 0.00 3.77
4934 5075 7.596995 TCTTATTTTCTTTTTATGCGTGTTGGG 59.403 33.333 0.00 0.00 0.00 4.12
4935 5076 4.920640 TTTCTTTTTATGCGTGTTGGGA 57.079 36.364 0.00 0.00 0.00 4.37
4937 5078 2.817258 TCTTTTTATGCGTGTTGGGAGG 59.183 45.455 0.00 0.00 0.00 4.30
4938 5079 2.279935 TTTTATGCGTGTTGGGAGGT 57.720 45.000 0.00 0.00 0.00 3.85
4942 5083 0.618458 ATGCGTGTTGGGAGGTATGT 59.382 50.000 0.00 0.00 0.00 2.29
4954 5095 3.307480 GGGAGGTATGTTTGCTGTAGTGT 60.307 47.826 0.00 0.00 0.00 3.55
4959 5101 4.323257 GGTATGTTTGCTGTAGTGTACCCT 60.323 45.833 0.00 0.00 0.00 4.34
4977 5119 2.288395 CCCTGTTTGTGGCAGATTTGTC 60.288 50.000 0.00 0.00 36.12 3.18
4992 5134 6.144854 CAGATTTGTCACACGTTCAAATGAT 58.855 36.000 16.73 7.53 40.38 2.45
4994 5136 7.802720 CAGATTTGTCACACGTTCAAATGATTA 59.197 33.333 16.73 0.00 40.38 1.75
4996 5138 5.993106 TGTCACACGTTCAAATGATTACA 57.007 34.783 0.00 0.00 0.00 2.41
4997 5139 6.552859 TGTCACACGTTCAAATGATTACAT 57.447 33.333 0.00 0.00 38.50 2.29
4998 5140 6.598525 TGTCACACGTTCAAATGATTACATC 58.401 36.000 0.00 0.00 35.50 3.06
4999 5141 6.203723 TGTCACACGTTCAAATGATTACATCA 59.796 34.615 0.00 0.00 44.55 3.07
5015 5159 8.760735 TGATTACATCATCCCAACATTTGAATT 58.239 29.630 0.00 0.00 33.59 2.17
5016 5160 9.603921 GATTACATCATCCCAACATTTGAATTT 57.396 29.630 0.00 0.00 0.00 1.82
5019 5163 7.626390 ACATCATCCCAACATTTGAATTTCAT 58.374 30.769 0.00 0.00 0.00 2.57
5022 5166 4.244066 TCCCAACATTTGAATTTCATGCG 58.756 39.130 0.00 0.00 0.00 4.73
5025 5169 4.244066 CAACATTTGAATTTCATGCGGGA 58.756 39.130 0.00 0.00 0.00 5.14
5030 5174 2.445427 TGAATTTCATGCGGGACACAT 58.555 42.857 0.00 0.00 0.00 3.21
5038 5182 1.902938 TGCGGGACACATGATTGAAA 58.097 45.000 0.00 0.00 0.00 2.69
5046 5190 4.262164 GGACACATGATTGAAAAGCCACTT 60.262 41.667 0.00 0.00 0.00 3.16
5047 5191 4.624015 ACACATGATTGAAAAGCCACTTG 58.376 39.130 0.00 0.00 0.00 3.16
5048 5192 4.341806 ACACATGATTGAAAAGCCACTTGA 59.658 37.500 0.00 0.00 0.00 3.02
5049 5193 5.163426 ACACATGATTGAAAAGCCACTTGAA 60.163 36.000 0.00 0.00 0.00 2.69
5062 5285 3.841643 CCACTTGAATTTCATGGTGCTC 58.158 45.455 19.10 0.00 32.82 4.26
5080 5308 5.108517 GTGCTCTCTAACTTCAATCTCCTG 58.891 45.833 0.00 0.00 0.00 3.86
5086 5314 5.347124 TCTAACTTCAATCTCCTGGGGTAA 58.653 41.667 0.00 0.00 0.00 2.85
5100 5328 7.570982 TCTCCTGGGGTAACATAAAATCTGATA 59.429 37.037 0.00 0.00 39.74 2.15
5103 5331 8.850156 CCTGGGGTAACATAAAATCTGATAAAG 58.150 37.037 0.00 0.00 39.74 1.85
5104 5332 9.627123 CTGGGGTAACATAAAATCTGATAAAGA 57.373 33.333 0.00 0.00 37.65 2.52
5105 5333 9.403583 TGGGGTAACATAAAATCTGATAAAGAC 57.596 33.333 0.00 0.00 36.26 3.01
5106 5334 9.403583 GGGGTAACATAAAATCTGATAAAGACA 57.596 33.333 0.00 0.00 36.26 3.41
5135 5363 7.505585 TCCCTAGTTTGATCACAAAAGAAACAT 59.494 33.333 0.00 0.00 45.65 2.71
5141 5369 9.993881 GTTTGATCACAAAAGAAACATAATTCG 57.006 29.630 0.00 0.00 45.65 3.34
5178 5406 1.237285 ACATTTCACTGGCGACCTGC 61.237 55.000 0.00 0.00 45.38 4.85
5190 5418 0.881159 CGACCTGCGGTGGTGTTTAA 60.881 55.000 4.94 0.00 41.00 1.52
5198 5426 1.816183 CGGTGGTGTTTAAAGCCCTCA 60.816 52.381 6.35 0.00 0.00 3.86
5212 5440 2.960659 CTCAGGCGATCTGCTGCG 60.961 66.667 8.94 0.00 45.43 5.18
5216 5444 4.212913 GGCGATCTGCTGCGAGGA 62.213 66.667 8.94 0.00 45.43 3.71
5240 5468 0.764369 AGCTTCACCTGTCCCACTCA 60.764 55.000 0.00 0.00 0.00 3.41
5249 5477 1.298014 GTCCCACTCAGAAGCTGGG 59.702 63.158 0.00 0.00 41.52 4.45
5255 5483 0.111253 ACTCAGAAGCTGGGTTTGGG 59.889 55.000 0.00 0.00 43.38 4.12
5306 5534 0.846693 AGGTGCTTTGAGGGTGAGTT 59.153 50.000 0.00 0.00 0.00 3.01
5309 5537 1.604278 GTGCTTTGAGGGTGAGTTGAC 59.396 52.381 0.00 0.00 0.00 3.18
5311 5539 2.297701 GCTTTGAGGGTGAGTTGACAA 58.702 47.619 0.00 0.00 0.00 3.18
5312 5540 2.033424 GCTTTGAGGGTGAGTTGACAAC 59.967 50.000 10.47 10.47 0.00 3.32
5315 5543 0.249911 GAGGGTGAGTTGACAACGCT 60.250 55.000 20.55 8.68 36.23 5.07
5364 5592 2.916716 GCAAACTGCACAAATACATCCG 59.083 45.455 0.00 0.00 44.26 4.18
5387 5615 7.972277 TCCGTATATTGAGTAGTCAAAAGACAC 59.028 37.037 16.70 9.53 45.88 3.67
5398 5626 7.936847 AGTAGTCAAAAGACACCATAAATGACA 59.063 33.333 0.00 0.00 38.64 3.58
5433 5661 7.849804 AATGTAATCGTAGAGAAGCAACAAT 57.150 32.000 0.00 0.00 43.63 2.71
5455 5685 7.224557 ACAATAAAAATTGTTGTCAACAGCCTC 59.775 33.333 17.49 0.00 40.33 4.70
5496 5726 8.846943 ACTCATGAGTCATCACTAGTATAGAG 57.153 38.462 22.89 5.55 37.87 2.43
5516 5748 8.764524 ATAGAGTGATATACTTGAAAATCGCC 57.235 34.615 0.00 0.00 40.53 5.54
5543 5775 4.725790 AGAAAAGCAAATATGAGCACCC 57.274 40.909 2.90 0.00 0.00 4.61
5544 5776 4.088634 AGAAAAGCAAATATGAGCACCCA 58.911 39.130 2.90 0.00 0.00 4.51
5560 5793 1.077265 CCAGGGCCAATGACCAAGT 59.923 57.895 6.18 0.00 0.00 3.16
5583 5816 8.697507 AGTAACTTTGTGGAAGAGAATGAATT 57.302 30.769 0.00 0.00 38.77 2.17
5589 5822 4.095334 TGTGGAAGAGAATGAATTCATGCG 59.905 41.667 21.39 0.00 36.99 4.73
5590 5823 4.095483 GTGGAAGAGAATGAATTCATGCGT 59.905 41.667 21.39 9.79 36.99 5.24
5591 5824 4.095334 TGGAAGAGAATGAATTCATGCGTG 59.905 41.667 21.39 0.00 36.99 5.34
5592 5825 4.095483 GGAAGAGAATGAATTCATGCGTGT 59.905 41.667 21.39 9.70 36.99 4.49
5593 5826 4.611310 AGAGAATGAATTCATGCGTGTG 57.389 40.909 21.39 0.00 36.99 3.82
5594 5827 3.376234 AGAGAATGAATTCATGCGTGTGG 59.624 43.478 21.39 0.00 36.99 4.17
5595 5828 3.084039 AGAATGAATTCATGCGTGTGGT 58.916 40.909 21.39 3.21 36.99 4.16
5596 5829 2.925578 ATGAATTCATGCGTGTGGTG 57.074 45.000 20.11 0.00 34.83 4.17
5597 5830 1.889545 TGAATTCATGCGTGTGGTGA 58.110 45.000 3.38 0.00 0.00 4.02
5598 5831 2.225467 TGAATTCATGCGTGTGGTGAA 58.775 42.857 3.38 0.00 36.42 3.18
5599 5832 2.620585 TGAATTCATGCGTGTGGTGAAA 59.379 40.909 3.38 0.00 35.70 2.69
5600 5833 3.255395 TGAATTCATGCGTGTGGTGAAAT 59.745 39.130 3.38 0.00 35.70 2.17
5601 5834 4.457257 TGAATTCATGCGTGTGGTGAAATA 59.543 37.500 3.38 0.00 35.70 1.40
5602 5835 4.621068 ATTCATGCGTGTGGTGAAATAG 57.379 40.909 5.68 0.00 35.70 1.73
5603 5836 3.326836 TCATGCGTGTGGTGAAATAGA 57.673 42.857 5.68 0.00 0.00 1.98
5604 5837 3.261580 TCATGCGTGTGGTGAAATAGAG 58.738 45.455 5.68 0.00 0.00 2.43
5605 5838 1.438651 TGCGTGTGGTGAAATAGAGC 58.561 50.000 0.00 0.00 0.00 4.09
5606 5839 1.001974 TGCGTGTGGTGAAATAGAGCT 59.998 47.619 0.00 0.00 0.00 4.09
5607 5840 2.232696 TGCGTGTGGTGAAATAGAGCTA 59.767 45.455 0.00 0.00 0.00 3.32
5608 5841 2.603560 GCGTGTGGTGAAATAGAGCTAC 59.396 50.000 0.00 0.00 0.00 3.58
5609 5842 3.845178 CGTGTGGTGAAATAGAGCTACA 58.155 45.455 0.00 0.00 0.00 2.74
5610 5843 4.242475 CGTGTGGTGAAATAGAGCTACAA 58.758 43.478 0.00 0.00 0.00 2.41
5611 5844 4.870426 CGTGTGGTGAAATAGAGCTACAAT 59.130 41.667 0.00 0.00 0.00 2.71
5612 5845 6.040247 CGTGTGGTGAAATAGAGCTACAATA 58.960 40.000 0.00 0.00 0.00 1.90
5613 5846 6.701841 CGTGTGGTGAAATAGAGCTACAATAT 59.298 38.462 0.00 0.00 0.00 1.28
5614 5847 7.865889 CGTGTGGTGAAATAGAGCTACAATATA 59.134 37.037 0.00 0.00 0.00 0.86
5615 5848 9.542462 GTGTGGTGAAATAGAGCTACAATATAA 57.458 33.333 0.00 0.00 0.00 0.98
5616 5849 9.764363 TGTGGTGAAATAGAGCTACAATATAAG 57.236 33.333 0.00 0.00 0.00 1.73
5617 5850 9.765795 GTGGTGAAATAGAGCTACAATATAAGT 57.234 33.333 0.00 0.00 0.00 2.24
5626 5859 8.079211 AGAGCTACAATATAAGTTCAAGGACA 57.921 34.615 0.00 0.00 0.00 4.02
5627 5860 8.200792 AGAGCTACAATATAAGTTCAAGGACAG 58.799 37.037 0.00 0.00 0.00 3.51
5628 5861 6.763610 AGCTACAATATAAGTTCAAGGACAGC 59.236 38.462 0.00 0.00 0.00 4.40
5629 5862 6.538742 GCTACAATATAAGTTCAAGGACAGCA 59.461 38.462 0.00 0.00 0.00 4.41
5630 5863 7.065803 GCTACAATATAAGTTCAAGGACAGCAA 59.934 37.037 0.00 0.00 0.00 3.91
5631 5864 7.759489 ACAATATAAGTTCAAGGACAGCAAA 57.241 32.000 0.00 0.00 0.00 3.68
5632 5865 8.353423 ACAATATAAGTTCAAGGACAGCAAAT 57.647 30.769 0.00 0.00 0.00 2.32
5633 5866 8.462016 ACAATATAAGTTCAAGGACAGCAAATC 58.538 33.333 0.00 0.00 0.00 2.17
5634 5867 8.680903 CAATATAAGTTCAAGGACAGCAAATCT 58.319 33.333 0.00 0.00 0.00 2.40
5635 5868 8.814038 ATATAAGTTCAAGGACAGCAAATCTT 57.186 30.769 0.00 0.00 0.00 2.40
5636 5869 9.905713 ATATAAGTTCAAGGACAGCAAATCTTA 57.094 29.630 0.00 0.00 0.00 2.10
5637 5870 6.959639 AAGTTCAAGGACAGCAAATCTTAA 57.040 33.333 0.00 0.00 0.00 1.85
5638 5871 6.566197 AGTTCAAGGACAGCAAATCTTAAG 57.434 37.500 0.00 0.00 0.00 1.85
5639 5872 6.064717 AGTTCAAGGACAGCAAATCTTAAGT 58.935 36.000 1.63 0.00 0.00 2.24
5640 5873 6.547510 AGTTCAAGGACAGCAAATCTTAAGTT 59.452 34.615 1.63 0.00 0.00 2.66
5641 5874 7.719633 AGTTCAAGGACAGCAAATCTTAAGTTA 59.280 33.333 1.63 0.00 0.00 2.24
5642 5875 8.515414 GTTCAAGGACAGCAAATCTTAAGTTAT 58.485 33.333 1.63 0.00 0.00 1.89
5643 5876 8.044060 TCAAGGACAGCAAATCTTAAGTTATG 57.956 34.615 1.63 1.55 0.00 1.90
5644 5877 6.442513 AGGACAGCAAATCTTAAGTTATGC 57.557 37.500 16.13 16.13 0.00 3.14
5645 5878 5.945784 AGGACAGCAAATCTTAAGTTATGCA 59.054 36.000 21.90 0.00 36.30 3.96
5646 5879 6.604795 AGGACAGCAAATCTTAAGTTATGCAT 59.395 34.615 21.90 3.79 36.30 3.96
5647 5880 7.123247 AGGACAGCAAATCTTAAGTTATGCATT 59.877 33.333 21.90 13.04 36.30 3.56
5648 5881 7.221452 GGACAGCAAATCTTAAGTTATGCATTG 59.779 37.037 21.90 16.89 36.30 2.82
5649 5882 6.532657 ACAGCAAATCTTAAGTTATGCATTGC 59.467 34.615 21.90 19.42 40.53 3.56
5650 5883 6.019318 CAGCAAATCTTAAGTTATGCATTGCC 60.019 38.462 21.90 0.00 40.99 4.52
5651 5884 5.811613 GCAAATCTTAAGTTATGCATTGCCA 59.188 36.000 3.54 0.00 35.76 4.92
5652 5885 6.313411 GCAAATCTTAAGTTATGCATTGCCAA 59.687 34.615 3.54 0.00 35.76 4.52
5653 5886 7.011669 GCAAATCTTAAGTTATGCATTGCCAAT 59.988 33.333 3.54 0.00 35.76 3.16
5654 5887 9.531942 CAAATCTTAAGTTATGCATTGCCAATA 57.468 29.630 3.54 0.00 0.00 1.90
5656 5889 9.701098 AATCTTAAGTTATGCATTGCCAATATG 57.299 29.630 3.54 0.00 0.00 1.78
5657 5890 8.236585 TCTTAAGTTATGCATTGCCAATATGT 57.763 30.769 3.54 0.00 0.00 2.29
5658 5891 8.352201 TCTTAAGTTATGCATTGCCAATATGTC 58.648 33.333 3.54 0.00 0.00 3.06
5659 5892 5.112220 AGTTATGCATTGCCAATATGTCG 57.888 39.130 3.54 0.00 0.00 4.35
5660 5893 4.022935 AGTTATGCATTGCCAATATGTCGG 60.023 41.667 3.54 0.00 0.00 4.79
5661 5894 1.761449 TGCATTGCCAATATGTCGGT 58.239 45.000 6.12 0.00 0.00 4.69
5662 5895 2.098614 TGCATTGCCAATATGTCGGTT 58.901 42.857 6.12 0.00 0.00 4.44
5663 5896 3.282885 TGCATTGCCAATATGTCGGTTA 58.717 40.909 6.12 0.00 0.00 2.85
5664 5897 3.314913 TGCATTGCCAATATGTCGGTTAG 59.685 43.478 6.12 0.00 0.00 2.34
5665 5898 3.315191 GCATTGCCAATATGTCGGTTAGT 59.685 43.478 0.00 0.00 0.00 2.24
5666 5899 4.202010 GCATTGCCAATATGTCGGTTAGTT 60.202 41.667 0.00 0.00 0.00 2.24
5667 5900 5.510671 CATTGCCAATATGTCGGTTAGTTC 58.489 41.667 0.00 0.00 0.00 3.01
5668 5901 4.209307 TGCCAATATGTCGGTTAGTTCA 57.791 40.909 0.00 0.00 0.00 3.18
5669 5902 4.580868 TGCCAATATGTCGGTTAGTTCAA 58.419 39.130 0.00 0.00 0.00 2.69
5670 5903 4.393680 TGCCAATATGTCGGTTAGTTCAAC 59.606 41.667 0.00 0.00 36.32 3.18
5671 5904 4.634443 GCCAATATGTCGGTTAGTTCAACT 59.366 41.667 0.00 0.00 37.30 3.16
5672 5905 5.447279 GCCAATATGTCGGTTAGTTCAACTG 60.447 44.000 0.00 0.00 43.81 3.16
5680 5913 5.079397 CGGTTAGTTCAACTGAAACTGTC 57.921 43.478 0.00 0.00 45.05 3.51
5681 5914 4.317839 CGGTTAGTTCAACTGAAACTGTCG 60.318 45.833 0.00 0.00 45.05 4.35
5682 5915 4.025145 GGTTAGTTCAACTGAAACTGTCGG 60.025 45.833 0.00 0.00 37.30 4.79
5684 5917 2.936498 AGTTCAACTGAAACTGTCGGTG 59.064 45.455 0.00 0.00 45.69 4.94
5685 5918 2.933906 GTTCAACTGAAACTGTCGGTGA 59.066 45.455 0.00 0.00 45.69 4.02
5686 5919 3.469008 TCAACTGAAACTGTCGGTGAT 57.531 42.857 0.00 0.00 45.69 3.06
5687 5920 3.804036 TCAACTGAAACTGTCGGTGATT 58.196 40.909 0.00 0.00 45.69 2.57
5688 5921 4.196193 TCAACTGAAACTGTCGGTGATTT 58.804 39.130 0.00 0.00 45.69 2.17
5689 5922 5.361427 TCAACTGAAACTGTCGGTGATTTA 58.639 37.500 0.00 0.00 45.69 1.40
5690 5923 5.465390 TCAACTGAAACTGTCGGTGATTTAG 59.535 40.000 0.00 0.00 45.69 1.85
5691 5924 4.957296 ACTGAAACTGTCGGTGATTTAGT 58.043 39.130 0.00 0.00 44.65 2.24
5692 5925 4.989168 ACTGAAACTGTCGGTGATTTAGTC 59.011 41.667 0.00 0.00 44.65 2.59
5693 5926 4.951254 TGAAACTGTCGGTGATTTAGTCA 58.049 39.130 0.00 0.00 0.00 3.41
5694 5927 5.547465 TGAAACTGTCGGTGATTTAGTCAT 58.453 37.500 0.00 0.00 39.48 3.06
5695 5928 5.637810 TGAAACTGTCGGTGATTTAGTCATC 59.362 40.000 0.00 0.00 39.48 2.92
5696 5929 4.801330 ACTGTCGGTGATTTAGTCATCA 57.199 40.909 0.00 0.00 37.86 3.07
5697 5930 4.748892 ACTGTCGGTGATTTAGTCATCAG 58.251 43.478 0.00 0.00 37.86 2.90
5698 5931 3.521560 TGTCGGTGATTTAGTCATCAGC 58.478 45.455 3.31 3.31 44.76 4.26
5702 5935 4.142609 GGTGATTTAGTCATCAGCAGGA 57.857 45.455 7.78 0.00 46.58 3.86
5703 5936 4.712476 GGTGATTTAGTCATCAGCAGGAT 58.288 43.478 7.78 0.00 46.58 3.24
5704 5937 5.128919 GGTGATTTAGTCATCAGCAGGATT 58.871 41.667 7.78 0.00 46.58 3.01
5705 5938 5.591877 GGTGATTTAGTCATCAGCAGGATTT 59.408 40.000 7.78 0.00 46.58 2.17
5706 5939 6.767902 GGTGATTTAGTCATCAGCAGGATTTA 59.232 38.462 7.78 0.00 46.58 1.40
5707 5940 7.041508 GGTGATTTAGTCATCAGCAGGATTTAG 60.042 40.741 7.78 0.00 46.58 1.85
5708 5941 7.712639 GTGATTTAGTCATCAGCAGGATTTAGA 59.287 37.037 0.00 0.00 39.48 2.10
5709 5942 7.930325 TGATTTAGTCATCAGCAGGATTTAGAG 59.070 37.037 0.00 0.00 32.57 2.43
5710 5943 6.798427 TTAGTCATCAGCAGGATTTAGAGT 57.202 37.500 0.00 0.00 32.57 3.24
5711 5944 7.898014 TTAGTCATCAGCAGGATTTAGAGTA 57.102 36.000 0.00 0.00 32.57 2.59
5712 5945 6.403866 AGTCATCAGCAGGATTTAGAGTAG 57.596 41.667 0.00 0.00 32.57 2.57
5713 5946 5.896678 AGTCATCAGCAGGATTTAGAGTAGT 59.103 40.000 0.00 0.00 32.57 2.73
5714 5947 6.040391 AGTCATCAGCAGGATTTAGAGTAGTC 59.960 42.308 0.00 0.00 32.57 2.59
5715 5948 5.893824 TCATCAGCAGGATTTAGAGTAGTCA 59.106 40.000 0.00 0.00 32.57 3.41
5716 5949 5.843673 TCAGCAGGATTTAGAGTAGTCAG 57.156 43.478 0.00 0.00 0.00 3.51
5717 5950 4.646945 TCAGCAGGATTTAGAGTAGTCAGG 59.353 45.833 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 0.692476 TCCATCACCACCTCAACAGG 59.308 55.000 0.00 0.00 46.87 4.00
106 107 3.314307 TGACGAGGAGGAGATATTGGT 57.686 47.619 0.00 0.00 0.00 3.67
210 212 1.956170 CGCCCGCAAGCTATTCGAT 60.956 57.895 4.09 0.00 0.00 3.59
351 353 3.314331 CACCACTCAGGCGTCCCT 61.314 66.667 0.00 0.00 44.25 4.20
404 417 3.587933 GCCACCGTCGTTTTGCCA 61.588 61.111 0.00 0.00 0.00 4.92
454 469 3.958147 CTGTCGGCGCCTCCACATT 62.958 63.158 26.68 0.00 34.01 2.71
522 538 2.803817 AACAGCAACCCTCGTCCGT 61.804 57.895 0.00 0.00 0.00 4.69
648 672 4.162690 GCGGCCCATTCTCGGTCT 62.163 66.667 0.00 0.00 0.00 3.85
679 703 4.550395 CAAACGGATGCGGGTTTG 57.450 55.556 12.44 9.82 44.64 2.93
680 704 2.272447 CCCAAACGGATGCGGGTTT 61.272 57.895 12.44 0.00 36.85 3.27
683 707 3.131478 GACCCAAACGGATGCGGG 61.131 66.667 12.44 4.71 44.88 6.13
704 731 0.673437 CACAAAAGACGGCCCAACAT 59.327 50.000 0.00 0.00 0.00 2.71
731 758 2.156446 CATTTCGTCCGTCGGGTCG 61.156 63.158 12.29 16.22 44.67 4.79
733 760 1.610554 ATCCATTTCGTCCGTCGGGT 61.611 55.000 12.29 0.00 40.32 5.28
769 816 2.817258 CGAGCAAATTGTGGGGTTAGAA 59.183 45.455 0.00 0.00 0.00 2.10
775 822 1.234615 ACGTCGAGCAAATTGTGGGG 61.235 55.000 0.00 0.00 0.00 4.96
790 837 3.471495 GTGATAGATCGATCGACACGTC 58.529 50.000 22.06 14.12 0.00 4.34
791 838 2.223611 GGTGATAGATCGATCGACACGT 59.776 50.000 27.87 3.88 33.51 4.49
792 839 2.722100 CGGTGATAGATCGATCGACACG 60.722 54.545 27.87 22.78 33.51 4.49
793 840 2.840673 CGGTGATAGATCGATCGACAC 58.159 52.381 27.54 27.54 0.00 3.67
794 841 1.197036 GCGGTGATAGATCGATCGACA 59.803 52.381 22.06 10.76 0.00 4.35
795 842 1.197036 TGCGGTGATAGATCGATCGAC 59.803 52.381 22.06 14.23 0.00 4.20
796 843 1.197036 GTGCGGTGATAGATCGATCGA 59.803 52.381 21.86 21.86 0.00 3.59
797 844 1.607713 GTGCGGTGATAGATCGATCG 58.392 55.000 19.33 9.36 0.00 3.69
798 845 1.197036 TCGTGCGGTGATAGATCGATC 59.803 52.381 17.91 17.91 0.00 3.69
799 846 1.069159 GTCGTGCGGTGATAGATCGAT 60.069 52.381 0.00 0.00 0.00 3.59
800 847 0.306840 GTCGTGCGGTGATAGATCGA 59.693 55.000 0.00 0.00 0.00 3.59
801 848 0.660595 GGTCGTGCGGTGATAGATCG 60.661 60.000 0.00 0.00 0.00 3.69
802 849 0.384309 TGGTCGTGCGGTGATAGATC 59.616 55.000 0.00 0.00 0.00 2.75
803 850 1.000163 GATGGTCGTGCGGTGATAGAT 60.000 52.381 0.00 0.00 0.00 1.98
806 853 1.440060 GGATGGTCGTGCGGTGATA 59.560 57.895 0.00 0.00 0.00 2.15
840 887 4.678044 CGTGTGGTACTATTGACTGATGCT 60.678 45.833 0.00 0.00 0.00 3.79
846 893 2.674177 GCTGCGTGTGGTACTATTGACT 60.674 50.000 0.00 0.00 0.00 3.41
853 900 3.991051 AGCGCTGCGTGTGGTACT 61.991 61.111 24.04 7.09 34.88 2.73
905 952 3.139077 GGGATTTTGACGCGGATAGATT 58.861 45.455 12.47 0.00 0.00 2.40
945 992 0.392060 GTTAATCGGGGGAAGTGCGT 60.392 55.000 0.00 0.00 0.00 5.24
953 1000 1.000955 CGATCTGGAGTTAATCGGGGG 59.999 57.143 0.00 0.00 38.82 5.40
991 1038 1.937362 GTTGTGTGTCGTTTGCGGC 60.937 57.895 0.00 0.00 43.99 6.53
992 1039 0.859788 GTGTTGTGTGTCGTTTGCGG 60.860 55.000 0.00 0.00 38.89 5.69
993 1040 0.179212 TGTGTTGTGTGTCGTTTGCG 60.179 50.000 0.00 0.00 39.92 4.85
994 1041 1.255767 GTGTGTTGTGTGTCGTTTGC 58.744 50.000 0.00 0.00 0.00 3.68
995 1042 2.238363 GTGTGTGTTGTGTGTCGTTTG 58.762 47.619 0.00 0.00 0.00 2.93
996 1043 1.198178 GGTGTGTGTTGTGTGTCGTTT 59.802 47.619 0.00 0.00 0.00 3.60
997 1044 0.800012 GGTGTGTGTTGTGTGTCGTT 59.200 50.000 0.00 0.00 0.00 3.85
998 1045 1.022451 GGGTGTGTGTTGTGTGTCGT 61.022 55.000 0.00 0.00 0.00 4.34
999 1046 1.711060 GGGGTGTGTGTTGTGTGTCG 61.711 60.000 0.00 0.00 0.00 4.35
1000 1047 1.381165 GGGGGTGTGTGTTGTGTGTC 61.381 60.000 0.00 0.00 0.00 3.67
1001 1048 1.379309 GGGGGTGTGTGTTGTGTGT 60.379 57.895 0.00 0.00 0.00 3.72
1002 1049 0.682855 AAGGGGGTGTGTGTTGTGTG 60.683 55.000 0.00 0.00 0.00 3.82
1003 1050 0.040499 AAAGGGGGTGTGTGTTGTGT 59.960 50.000 0.00 0.00 0.00 3.72
1004 1051 0.744281 GAAAGGGGGTGTGTGTTGTG 59.256 55.000 0.00 0.00 0.00 3.33
1005 1052 0.629058 AGAAAGGGGGTGTGTGTTGT 59.371 50.000 0.00 0.00 0.00 3.32
1006 1053 1.318576 GAGAAAGGGGGTGTGTGTTG 58.681 55.000 0.00 0.00 0.00 3.33
1007 1054 0.185175 GGAGAAAGGGGGTGTGTGTT 59.815 55.000 0.00 0.00 0.00 3.32
1051 1103 1.841103 GAGGAGGAGGATGGGCTCC 60.841 68.421 0.00 0.00 45.33 4.70
1403 1466 2.678934 TCGACGGGGGACAGGAAG 60.679 66.667 0.00 0.00 0.00 3.46
1763 1826 1.821216 TGAGGGTCTTGCCGATTTTC 58.179 50.000 0.00 0.00 38.44 2.29
1766 1829 1.207791 AGATGAGGGTCTTGCCGATT 58.792 50.000 0.00 0.00 38.44 3.34
1772 1835 3.710209 ACCTTGAAGATGAGGGTCTTG 57.290 47.619 0.00 0.00 38.51 3.02
1857 1920 1.985662 CCATTGGGTGGCTGCACAT 60.986 57.895 0.50 0.00 42.12 3.21
1995 2061 4.776837 TGGTTGGATAGTGGCAAATTTGAT 59.223 37.500 22.31 5.70 0.00 2.57
1996 2062 4.155709 TGGTTGGATAGTGGCAAATTTGA 58.844 39.130 22.31 0.36 0.00 2.69
1997 2063 4.533919 TGGTTGGATAGTGGCAAATTTG 57.466 40.909 14.03 14.03 0.00 2.32
1998 2064 4.592778 AGTTGGTTGGATAGTGGCAAATTT 59.407 37.500 0.00 0.00 0.00 1.82
2047 2116 6.252441 CGTCTCATGAAAGAGATAGTGACAAC 59.748 42.308 0.00 0.00 45.61 3.32
2137 2206 5.536538 AGATTCTGTGGCGAAGTATCTATGA 59.463 40.000 6.59 0.00 32.07 2.15
2152 2221 7.148289 ACACATTCATCTAAGCAAGATTCTGTG 60.148 37.037 20.19 20.19 42.62 3.66
2200 2271 9.413048 GATCTAAACACTCTTATATTTCGGGAG 57.587 37.037 0.00 0.00 0.00 4.30
2201 2272 8.920174 TGATCTAAACACTCTTATATTTCGGGA 58.080 33.333 0.00 0.00 0.00 5.14
2202 2273 8.979574 GTGATCTAAACACTCTTATATTTCGGG 58.020 37.037 0.00 0.00 35.66 5.14
2203 2274 9.751542 AGTGATCTAAACACTCTTATATTTCGG 57.248 33.333 0.00 0.00 43.84 4.30
2243 2314 8.470805 CCTCCGTAAAGACATATAAGAGCATAT 58.529 37.037 0.00 0.00 0.00 1.78
2244 2315 7.093902 CCCTCCGTAAAGACATATAAGAGCATA 60.094 40.741 0.00 0.00 0.00 3.14
2245 2316 6.295349 CCCTCCGTAAAGACATATAAGAGCAT 60.295 42.308 0.00 0.00 0.00 3.79
2246 2317 5.010719 CCCTCCGTAAAGACATATAAGAGCA 59.989 44.000 0.00 0.00 0.00 4.26
2247 2318 5.243283 TCCCTCCGTAAAGACATATAAGAGC 59.757 44.000 0.00 0.00 0.00 4.09
2248 2319 6.490721 ACTCCCTCCGTAAAGACATATAAGAG 59.509 42.308 0.00 0.00 0.00 2.85
2249 2320 6.371278 ACTCCCTCCGTAAAGACATATAAGA 58.629 40.000 0.00 0.00 0.00 2.10
2250 2321 6.651975 ACTCCCTCCGTAAAGACATATAAG 57.348 41.667 0.00 0.00 0.00 1.73
2251 2322 7.293073 ACTACTCCCTCCGTAAAGACATATAA 58.707 38.462 0.00 0.00 0.00 0.98
2252 2323 6.845908 ACTACTCCCTCCGTAAAGACATATA 58.154 40.000 0.00 0.00 0.00 0.86
2253 2324 5.703310 ACTACTCCCTCCGTAAAGACATAT 58.297 41.667 0.00 0.00 0.00 1.78
2254 2325 5.121380 ACTACTCCCTCCGTAAAGACATA 57.879 43.478 0.00 0.00 0.00 2.29
2255 2326 3.978610 ACTACTCCCTCCGTAAAGACAT 58.021 45.455 0.00 0.00 0.00 3.06
2256 2327 3.446442 ACTACTCCCTCCGTAAAGACA 57.554 47.619 0.00 0.00 0.00 3.41
2257 2328 5.359292 ACAATACTACTCCCTCCGTAAAGAC 59.641 44.000 0.00 0.00 0.00 3.01
2258 2329 5.513233 ACAATACTACTCCCTCCGTAAAGA 58.487 41.667 0.00 0.00 0.00 2.52
2259 2330 5.848833 ACAATACTACTCCCTCCGTAAAG 57.151 43.478 0.00 0.00 0.00 1.85
2260 2331 7.716799 TTAACAATACTACTCCCTCCGTAAA 57.283 36.000 0.00 0.00 0.00 2.01
2261 2332 7.716799 TTTAACAATACTACTCCCTCCGTAA 57.283 36.000 0.00 0.00 0.00 3.18
2262 2333 7.397192 ACTTTTAACAATACTACTCCCTCCGTA 59.603 37.037 0.00 0.00 0.00 4.02
2263 2334 6.212187 ACTTTTAACAATACTACTCCCTCCGT 59.788 38.462 0.00 0.00 0.00 4.69
2264 2335 6.534079 CACTTTTAACAATACTACTCCCTCCG 59.466 42.308 0.00 0.00 0.00 4.63
2265 2336 7.618137 TCACTTTTAACAATACTACTCCCTCC 58.382 38.462 0.00 0.00 0.00 4.30
2266 2337 9.498176 TTTCACTTTTAACAATACTACTCCCTC 57.502 33.333 0.00 0.00 0.00 4.30
2267 2338 9.503399 CTTTCACTTTTAACAATACTACTCCCT 57.497 33.333 0.00 0.00 0.00 4.20
2268 2339 8.235226 GCTTTCACTTTTAACAATACTACTCCC 58.765 37.037 0.00 0.00 0.00 4.30
2269 2340 8.780249 TGCTTTCACTTTTAACAATACTACTCC 58.220 33.333 0.00 0.00 0.00 3.85
2272 2343 8.902735 GCTTGCTTTCACTTTTAACAATACTAC 58.097 33.333 0.00 0.00 0.00 2.73
2273 2344 8.079809 GGCTTGCTTTCACTTTTAACAATACTA 58.920 33.333 0.00 0.00 0.00 1.82
2274 2345 6.923508 GGCTTGCTTTCACTTTTAACAATACT 59.076 34.615 0.00 0.00 0.00 2.12
2325 2398 0.801872 GTGCCGCATCATGTGTACAA 59.198 50.000 0.00 0.00 0.00 2.41
2360 2433 0.798776 GGACAGTGACAGAATTGCGG 59.201 55.000 0.00 0.00 0.00 5.69
2362 2435 3.503363 TGAATGGACAGTGACAGAATTGC 59.497 43.478 0.00 0.00 0.00 3.56
2376 2449 9.132521 CAAATAGAAACAAGATGTTGAATGGAC 57.867 33.333 9.96 0.00 40.14 4.02
2484 2557 5.627499 TTGTTATCTGATGAACACAAGGC 57.373 39.130 0.00 0.00 35.35 4.35
2586 2659 6.660722 TGCTTTAAATTGTGTAACCGTACAG 58.339 36.000 0.00 0.00 40.94 2.74
2587 2660 6.615264 TGCTTTAAATTGTGTAACCGTACA 57.385 33.333 0.00 0.00 37.92 2.90
2591 2664 4.384547 GGCTTGCTTTAAATTGTGTAACCG 59.615 41.667 0.00 0.00 34.36 4.44
2632 2705 9.810545 TGTCTTAATATCACGACATACAATCAA 57.189 29.630 0.00 0.00 32.00 2.57
2684 2758 9.830975 ATGGTGCTAATAGTTTTTCAAACTTTT 57.169 25.926 7.17 8.34 0.00 2.27
2721 2795 9.349713 CTGGCCAAAGAAATACATATTTAGGTA 57.650 33.333 7.01 0.00 36.13 3.08
2722 2796 8.058847 TCTGGCCAAAGAAATACATATTTAGGT 58.941 33.333 7.01 0.00 36.13 3.08
2731 2805 4.138290 TCGTTTCTGGCCAAAGAAATACA 58.862 39.130 19.71 7.38 45.37 2.29
2831 2905 6.091986 TGCACAAGAAAAGAACCAATTGTTTC 59.908 34.615 7.60 7.60 37.29 2.78
2879 2953 5.694816 TGCAGGTTATAATTTTGACACACG 58.305 37.500 0.00 0.00 0.00 4.49
2943 3017 0.169672 CCTTGCACAATGGAAGCTCG 59.830 55.000 4.68 0.00 43.32 5.03
3093 3167 1.747355 CTGAAAATAGCTGGCCCACTG 59.253 52.381 0.00 0.00 0.00 3.66
3096 3170 1.635487 AGACTGAAAATAGCTGGCCCA 59.365 47.619 0.00 0.00 0.00 5.36
3317 3391 7.728580 TTTTTAACACTTGTGCTTAACTTCG 57.271 32.000 0.10 0.00 0.00 3.79
3362 3443 5.205565 GTGTTAAACAGCGAGGAAAGAAAG 58.794 41.667 0.00 0.00 0.00 2.62
3382 3463 9.921637 TTTGATTCTAAAAAGAAACACTTGTGT 57.078 25.926 0.00 0.00 38.98 3.72
3463 3557 9.362151 TCCCAAAATAAGTGTCTCAACTTTATT 57.638 29.630 0.00 0.00 40.77 1.40
3464 3558 8.793592 GTCCCAAAATAAGTGTCTCAACTTTAT 58.206 33.333 0.00 0.00 40.77 1.40
3489 3583 4.073549 GGTGTAGCATATACTCTCTCCGT 58.926 47.826 0.00 0.00 32.78 4.69
3490 3584 3.440872 GGGTGTAGCATATACTCTCTCCG 59.559 52.174 0.00 0.00 29.54 4.63
3495 3589 3.074094 TCGGAGGGTGTAGCATATACTCT 59.926 47.826 0.00 0.00 46.94 3.24
3508 3602 3.055094 CCCTTATTATGGATCGGAGGGTG 60.055 52.174 0.00 0.00 38.01 4.61
3509 3603 3.182152 CCCTTATTATGGATCGGAGGGT 58.818 50.000 0.00 0.00 38.01 4.34
3516 3610 4.273148 ACTGCGACCCTTATTATGGATC 57.727 45.455 0.00 0.00 0.00 3.36
3517 3611 4.706842 AACTGCGACCCTTATTATGGAT 57.293 40.909 0.00 0.00 0.00 3.41
3529 3623 2.876550 ACCTTAGTTCAAAACTGCGACC 59.123 45.455 2.65 0.00 42.84 4.79
3552 3646 9.447040 GTCACAGTTTTGAAATAAGGTTAGTTC 57.553 33.333 3.52 3.52 38.01 3.01
3553 3647 8.962679 TGTCACAGTTTTGAAATAAGGTTAGTT 58.037 29.630 0.00 0.00 0.00 2.24
3554 3648 8.403236 GTGTCACAGTTTTGAAATAAGGTTAGT 58.597 33.333 0.00 0.00 0.00 2.24
3555 3649 8.621286 AGTGTCACAGTTTTGAAATAAGGTTAG 58.379 33.333 5.62 0.00 0.00 2.34
3556 3650 8.514330 AGTGTCACAGTTTTGAAATAAGGTTA 57.486 30.769 5.62 0.00 0.00 2.85
3557 3651 7.404671 AGTGTCACAGTTTTGAAATAAGGTT 57.595 32.000 5.62 0.00 0.00 3.50
3558 3652 7.093945 ACAAGTGTCACAGTTTTGAAATAAGGT 60.094 33.333 5.62 0.00 0.00 3.50
3559 3653 7.257722 ACAAGTGTCACAGTTTTGAAATAAGG 58.742 34.615 5.62 0.00 0.00 2.69
3560 3654 8.687824 AACAAGTGTCACAGTTTTGAAATAAG 57.312 30.769 5.62 0.00 0.00 1.73
3561 3655 9.482627 AAAACAAGTGTCACAGTTTTGAAATAA 57.517 25.926 25.64 0.00 41.18 1.40
3563 3657 7.961325 AAAACAAGTGTCACAGTTTTGAAAT 57.039 28.000 25.64 11.32 41.18 2.17
3568 3662 6.745450 CGATACAAAACAAGTGTCACAGTTTT 59.255 34.615 22.94 22.94 42.86 2.43
3569 3663 6.255215 CGATACAAAACAAGTGTCACAGTTT 58.745 36.000 16.34 16.34 35.87 2.66
3570 3664 5.220777 CCGATACAAAACAAGTGTCACAGTT 60.221 40.000 5.62 6.86 0.00 3.16
3571 3665 4.272504 CCGATACAAAACAAGTGTCACAGT 59.727 41.667 5.62 0.30 0.00 3.55
3572 3666 4.509970 TCCGATACAAAACAAGTGTCACAG 59.490 41.667 5.62 0.00 0.00 3.66
3573 3667 4.443621 TCCGATACAAAACAAGTGTCACA 58.556 39.130 5.62 0.00 0.00 3.58
3574 3668 4.084013 CCTCCGATACAAAACAAGTGTCAC 60.084 45.833 0.00 0.00 0.00 3.67
3575 3669 4.062293 CCTCCGATACAAAACAAGTGTCA 58.938 43.478 0.00 0.00 0.00 3.58
3576 3670 3.435671 CCCTCCGATACAAAACAAGTGTC 59.564 47.826 0.00 0.00 0.00 3.67
3577 3671 3.071892 TCCCTCCGATACAAAACAAGTGT 59.928 43.478 0.00 0.00 0.00 3.55
3578 3672 3.670625 TCCCTCCGATACAAAACAAGTG 58.329 45.455 0.00 0.00 0.00 3.16
3579 3673 3.326880 ACTCCCTCCGATACAAAACAAGT 59.673 43.478 0.00 0.00 0.00 3.16
3580 3674 3.939066 ACTCCCTCCGATACAAAACAAG 58.061 45.455 0.00 0.00 0.00 3.16
3581 3675 5.486735 TTACTCCCTCCGATACAAAACAA 57.513 39.130 0.00 0.00 0.00 2.83
3582 3676 5.486735 TTTACTCCCTCCGATACAAAACA 57.513 39.130 0.00 0.00 0.00 2.83
3583 3677 6.997239 AATTTACTCCCTCCGATACAAAAC 57.003 37.500 0.00 0.00 0.00 2.43
3584 3678 9.689501 ATAAAATTTACTCCCTCCGATACAAAA 57.310 29.630 0.00 0.00 0.00 2.44
3585 3679 9.333724 GATAAAATTTACTCCCTCCGATACAAA 57.666 33.333 0.00 0.00 0.00 2.83
3586 3680 8.487848 TGATAAAATTTACTCCCTCCGATACAA 58.512 33.333 0.00 0.00 0.00 2.41
3587 3681 8.025270 TGATAAAATTTACTCCCTCCGATACA 57.975 34.615 0.00 0.00 0.00 2.29
3588 3682 8.936864 CATGATAAAATTTACTCCCTCCGATAC 58.063 37.037 0.00 0.00 0.00 2.24
3589 3683 8.656806 ACATGATAAAATTTACTCCCTCCGATA 58.343 33.333 0.00 0.00 0.00 2.92
3645 3739 8.383619 CAGACGAGTAATTTAAGCATATATGGC 58.616 37.037 14.51 6.90 0.00 4.40
3802 3896 1.068055 CCATTGCAGGCAGAAGTTCAC 60.068 52.381 5.50 0.00 0.00 3.18
3810 3904 0.963962 AAGACAACCATTGCAGGCAG 59.036 50.000 0.00 0.00 0.00 4.85
3811 3905 0.961019 GAAGACAACCATTGCAGGCA 59.039 50.000 0.00 0.00 0.00 4.75
3812 3906 0.244721 GGAAGACAACCATTGCAGGC 59.755 55.000 0.00 0.00 0.00 4.85
3813 3907 1.270550 GTGGAAGACAACCATTGCAGG 59.729 52.381 0.00 0.00 39.69 4.85
3861 3956 5.912149 TCTGGGGCATCAGATAACTTTAT 57.088 39.130 5.81 0.00 38.70 1.40
3972 4084 2.505819 ACTGGGACAAGACAAGAACAGT 59.494 45.455 0.00 0.00 38.70 3.55
4018 4130 3.056179 TCACGTCCACAGAATCAGCATTA 60.056 43.478 0.00 0.00 0.00 1.90
4020 4132 1.276138 TCACGTCCACAGAATCAGCAT 59.724 47.619 0.00 0.00 0.00 3.79
4036 4148 1.792301 CATGCTGTTGCCTCTCACG 59.208 57.895 0.00 0.00 38.71 4.35
4081 4193 2.017049 AGTGACAGCTCAAAACACCAC 58.983 47.619 0.00 0.00 32.76 4.16
4082 4194 2.288666 GAGTGACAGCTCAAAACACCA 58.711 47.619 0.00 0.00 35.67 4.17
4102 4214 3.369261 GCTGGGCATATCACTATCTCCTG 60.369 52.174 0.00 0.00 0.00 3.86
4110 4222 1.347050 CTAGCAGCTGGGCATATCACT 59.653 52.381 17.12 2.81 35.83 3.41
4116 4228 1.270414 ACTCACTAGCAGCTGGGCAT 61.270 55.000 17.12 0.00 35.83 4.40
4157 4269 8.403236 GGCATAATAACAGTTACCCTTAACAAG 58.597 37.037 0.00 0.00 40.25 3.16
4163 4275 4.687769 CGGGGCATAATAACAGTTACCCTT 60.688 45.833 13.26 0.75 36.31 3.95
4166 4278 3.143728 CCGGGGCATAATAACAGTTACC 58.856 50.000 0.00 0.00 0.00 2.85
4173 4285 1.684450 CAAACCCCGGGGCATAATAAC 59.316 52.381 40.67 0.00 39.32 1.89
4176 4288 0.686112 CACAAACCCCGGGGCATAAT 60.686 55.000 40.67 17.96 39.32 1.28
4185 4297 6.443934 TGTTATTATGAATCACAAACCCCG 57.556 37.500 0.00 0.00 0.00 5.73
4196 4308 6.306199 TGGCCTGTAGCATGTTATTATGAAT 58.694 36.000 3.32 0.00 46.50 2.57
4202 4314 2.301346 GCTGGCCTGTAGCATGTTATT 58.699 47.619 11.69 0.00 46.50 1.40
4204 4316 0.107214 GGCTGGCCTGTAGCATGTTA 60.107 55.000 14.91 0.00 46.50 2.41
4215 4327 0.333993 ATCTTGAATGTGGCTGGCCT 59.666 50.000 13.05 0.00 36.94 5.19
4219 4331 2.133281 TGGGATCTTGAATGTGGCTG 57.867 50.000 0.00 0.00 0.00 4.85
4231 4343 3.033659 AGTACGAGGTCATTGGGATCT 57.966 47.619 0.00 0.00 40.60 2.75
4236 4348 3.123804 GTGCATAGTACGAGGTCATTGG 58.876 50.000 0.00 0.00 0.00 3.16
4245 4357 5.779922 AGAGAAACAAAGTGCATAGTACGA 58.220 37.500 0.00 0.00 0.00 3.43
4248 4360 5.805486 CGCTAGAGAAACAAAGTGCATAGTA 59.195 40.000 0.00 0.00 0.00 1.82
4252 4364 3.403038 ACGCTAGAGAAACAAAGTGCAT 58.597 40.909 0.00 0.00 0.00 3.96
4277 4389 6.609616 AGGGAAACTTAATCAAGTGACCAAAA 59.390 34.615 6.75 0.00 44.41 2.44
4278 4390 6.133356 AGGGAAACTTAATCAAGTGACCAAA 58.867 36.000 6.75 0.00 44.41 3.28
4289 4401 6.653989 TCTGGATCTTGAGGGAAACTTAATC 58.346 40.000 0.00 0.00 0.00 1.75
4321 4433 7.834068 TCAAAGCTACTTCTAACTTATGCTG 57.166 36.000 0.00 0.00 0.00 4.41
4370 4482 7.032377 AGAACAGAAGAAAATTGGTCAGTTC 57.968 36.000 0.00 0.00 30.99 3.01
4384 4518 5.357878 AGAACACATGCAAAAGAACAGAAGA 59.642 36.000 0.00 0.00 0.00 2.87
4409 4543 4.060038 AGATCGTACCAAGCATACCAAG 57.940 45.455 0.00 0.00 0.00 3.61
4422 4556 1.249407 CAGGGGGCTCTAGATCGTAC 58.751 60.000 0.00 0.00 0.00 3.67
4425 4559 1.834378 TGCAGGGGGCTCTAGATCG 60.834 63.158 0.00 0.00 45.15 3.69
4441 4575 0.606401 TCAAGCAGGCCTGTTAGTGC 60.606 55.000 32.81 19.05 36.10 4.40
4504 4638 2.496899 TCTTCTCCATGGCTTCAACC 57.503 50.000 6.96 0.00 0.00 3.77
4531 4665 2.776526 TGCACAGGTGAAGGGGGT 60.777 61.111 3.10 0.00 0.00 4.95
4558 4692 1.523934 ACGTTTTTGTCATCGACGACC 59.476 47.619 9.43 0.00 37.20 4.79
4648 4784 2.364972 AGAACCACAAAGAACCAGGG 57.635 50.000 0.00 0.00 0.00 4.45
4727 4863 6.568869 AGAGATGCTACAACAGTGATAAGAC 58.431 40.000 0.00 0.00 0.00 3.01
4735 4871 7.831691 ATATCACTAGAGATGCTACAACAGT 57.168 36.000 12.39 0.00 0.00 3.55
4750 4886 8.483218 CAACGCATACTCTTCAAATATCACTAG 58.517 37.037 0.00 0.00 0.00 2.57
4755 4891 6.844696 TCCAACGCATACTCTTCAAATATC 57.155 37.500 0.00 0.00 0.00 1.63
4756 4892 7.011482 GTCTTCCAACGCATACTCTTCAAATAT 59.989 37.037 0.00 0.00 0.00 1.28
4757 4893 6.312918 GTCTTCCAACGCATACTCTTCAAATA 59.687 38.462 0.00 0.00 0.00 1.40
4758 4894 5.122396 GTCTTCCAACGCATACTCTTCAAAT 59.878 40.000 0.00 0.00 0.00 2.32
4759 4895 4.451096 GTCTTCCAACGCATACTCTTCAAA 59.549 41.667 0.00 0.00 0.00 2.69
4761 4897 3.006430 TGTCTTCCAACGCATACTCTTCA 59.994 43.478 0.00 0.00 0.00 3.02
4762 4898 3.368236 GTGTCTTCCAACGCATACTCTTC 59.632 47.826 0.00 0.00 0.00 2.87
4772 4912 0.036671 GGGGGTAGTGTCTTCCAACG 60.037 60.000 0.00 0.00 0.00 4.10
4776 4916 1.198759 TGCTGGGGGTAGTGTCTTCC 61.199 60.000 0.00 0.00 0.00 3.46
4781 4921 2.122144 TGGTGCTGGGGGTAGTGT 60.122 61.111 0.00 0.00 0.00 3.55
4789 4929 1.750399 GCTATGGTGTGGTGCTGGG 60.750 63.158 0.00 0.00 0.00 4.45
4790 4930 1.750399 GGCTATGGTGTGGTGCTGG 60.750 63.158 0.00 0.00 0.00 4.85
4791 4931 1.750399 GGGCTATGGTGTGGTGCTG 60.750 63.158 0.00 0.00 0.00 4.41
4792 4932 2.677228 GGGCTATGGTGTGGTGCT 59.323 61.111 0.00 0.00 0.00 4.40
4793 4933 2.440247 GGGGCTATGGTGTGGTGC 60.440 66.667 0.00 0.00 0.00 5.01
4796 4936 0.039618 ACAAAGGGGCTATGGTGTGG 59.960 55.000 0.00 0.00 0.00 4.17
4800 4940 4.045022 ACACTATACAAAGGGGCTATGGT 58.955 43.478 0.00 0.00 0.00 3.55
4843 4984 2.794631 CGAACAACCAACAAGCAAGGTC 60.795 50.000 0.00 0.00 33.74 3.85
4845 4986 1.403679 TCGAACAACCAACAAGCAAGG 59.596 47.619 0.00 0.00 0.00 3.61
4850 4991 2.285083 TCCACTCGAACAACCAACAAG 58.715 47.619 0.00 0.00 0.00 3.16
4852 4993 1.208535 ACTCCACTCGAACAACCAACA 59.791 47.619 0.00 0.00 0.00 3.33
4864 5005 6.436843 TTCACTTCAAAAAGAACTCCACTC 57.563 37.500 0.00 0.00 36.30 3.51
4877 5018 9.248291 GCAACTCAAGATTTATTTCACTTCAAA 57.752 29.630 0.00 0.00 0.00 2.69
4878 5019 7.867403 GGCAACTCAAGATTTATTTCACTTCAA 59.133 33.333 0.00 0.00 0.00 2.69
4885 5026 7.550712 AGATTGGGCAACTCAAGATTTATTTC 58.449 34.615 0.00 0.00 31.68 2.17
4897 5038 8.607441 AAAAAGAAAATAAGATTGGGCAACTC 57.393 30.769 0.00 0.00 0.00 3.01
4903 5044 8.594687 CACGCATAAAAAGAAAATAAGATTGGG 58.405 33.333 0.00 0.00 0.00 4.12
4907 5048 9.139174 CCAACACGCATAAAAAGAAAATAAGAT 57.861 29.630 0.00 0.00 0.00 2.40
4918 5059 2.588620 ACCTCCCAACACGCATAAAAA 58.411 42.857 0.00 0.00 0.00 1.94
4926 5067 1.199097 GCAAACATACCTCCCAACACG 59.801 52.381 0.00 0.00 0.00 4.49
4928 5069 2.158534 ACAGCAAACATACCTCCCAACA 60.159 45.455 0.00 0.00 0.00 3.33
4931 5072 2.910319 ACTACAGCAAACATACCTCCCA 59.090 45.455 0.00 0.00 0.00 4.37
4932 5073 3.270877 CACTACAGCAAACATACCTCCC 58.729 50.000 0.00 0.00 0.00 4.30
4933 5074 3.939066 ACACTACAGCAAACATACCTCC 58.061 45.455 0.00 0.00 0.00 4.30
4934 5075 4.868734 GGTACACTACAGCAAACATACCTC 59.131 45.833 0.00 0.00 0.00 3.85
4935 5076 4.323257 GGGTACACTACAGCAAACATACCT 60.323 45.833 0.00 0.00 32.96 3.08
4937 5078 4.630069 CAGGGTACACTACAGCAAACATAC 59.370 45.833 0.00 0.00 0.00 2.39
4938 5079 4.285003 ACAGGGTACACTACAGCAAACATA 59.715 41.667 0.00 0.00 0.00 2.29
4942 5083 3.849563 AACAGGGTACACTACAGCAAA 57.150 42.857 0.00 0.00 0.00 3.68
4954 5095 2.890311 CAAATCTGCCACAAACAGGGTA 59.110 45.455 0.00 0.00 35.78 3.69
4959 5101 2.757314 TGTGACAAATCTGCCACAAACA 59.243 40.909 0.00 0.00 42.21 2.83
4992 5134 8.591940 TGAAATTCAAATGTTGGGATGATGTAA 58.408 29.630 0.00 0.00 0.00 2.41
4994 5136 7.006865 TGAAATTCAAATGTTGGGATGATGT 57.993 32.000 0.00 0.00 0.00 3.06
4996 5138 6.540914 GCATGAAATTCAAATGTTGGGATGAT 59.459 34.615 0.00 0.00 0.00 2.45
4997 5139 5.875910 GCATGAAATTCAAATGTTGGGATGA 59.124 36.000 0.00 0.00 0.00 2.92
4998 5140 5.220510 CGCATGAAATTCAAATGTTGGGATG 60.221 40.000 0.00 0.00 0.00 3.51
4999 5141 4.871557 CGCATGAAATTCAAATGTTGGGAT 59.128 37.500 0.00 0.00 0.00 3.85
5000 5142 4.244066 CGCATGAAATTCAAATGTTGGGA 58.756 39.130 0.00 0.00 0.00 4.37
5001 5143 3.371591 CCGCATGAAATTCAAATGTTGGG 59.628 43.478 0.00 1.86 0.00 4.12
5002 5144 3.371591 CCCGCATGAAATTCAAATGTTGG 59.628 43.478 0.00 2.03 0.00 3.77
5004 5146 4.244862 GTCCCGCATGAAATTCAAATGTT 58.755 39.130 0.00 0.00 0.00 2.71
5019 5163 1.902938 TTTCAATCATGTGTCCCGCA 58.097 45.000 0.00 0.00 0.00 5.69
5022 5166 2.562298 TGGCTTTTCAATCATGTGTCCC 59.438 45.455 0.00 0.00 0.00 4.46
5025 5169 4.341806 TCAAGTGGCTTTTCAATCATGTGT 59.658 37.500 0.00 0.00 0.00 3.72
5030 5174 6.580788 TGAAATTCAAGTGGCTTTTCAATCA 58.419 32.000 0.00 0.00 34.39 2.57
5038 5182 3.555586 GCACCATGAAATTCAAGTGGCTT 60.556 43.478 22.49 3.33 36.09 4.35
5046 5190 5.809001 AGTTAGAGAGCACCATGAAATTCA 58.191 37.500 0.00 0.00 0.00 2.57
5047 5191 6.372659 TGAAGTTAGAGAGCACCATGAAATTC 59.627 38.462 0.00 0.00 0.00 2.17
5048 5192 6.240894 TGAAGTTAGAGAGCACCATGAAATT 58.759 36.000 0.00 0.00 0.00 1.82
5049 5193 5.809001 TGAAGTTAGAGAGCACCATGAAAT 58.191 37.500 0.00 0.00 0.00 2.17
5062 5285 3.777522 ACCCCAGGAGATTGAAGTTAGAG 59.222 47.826 0.00 0.00 0.00 2.43
5080 5308 9.403583 TGTCTTTATCAGATTTTATGTTACCCC 57.596 33.333 0.00 0.00 32.60 4.95
5100 5328 7.004086 TGTGATCAAACTAGGGAATTGTCTTT 58.996 34.615 0.00 0.00 0.00 2.52
5103 5331 6.817765 TTGTGATCAAACTAGGGAATTGTC 57.182 37.500 0.00 0.00 0.00 3.18
5104 5332 7.505585 TCTTTTGTGATCAAACTAGGGAATTGT 59.494 33.333 0.00 0.00 42.28 2.71
5105 5333 7.885297 TCTTTTGTGATCAAACTAGGGAATTG 58.115 34.615 0.00 0.00 42.28 2.32
5106 5334 8.477419 TTCTTTTGTGATCAAACTAGGGAATT 57.523 30.769 0.00 0.00 42.28 2.17
5107 5335 8.360390 GTTTCTTTTGTGATCAAACTAGGGAAT 58.640 33.333 0.00 0.00 42.28 3.01
5135 5363 3.709141 TGGAGATGTGGGATGTCGAATTA 59.291 43.478 0.00 0.00 0.00 1.40
5137 5365 2.118679 TGGAGATGTGGGATGTCGAAT 58.881 47.619 0.00 0.00 0.00 3.34
5141 5369 1.278985 TGTGTGGAGATGTGGGATGTC 59.721 52.381 0.00 0.00 0.00 3.06
5178 5406 0.879090 GAGGGCTTTAAACACCACCG 59.121 55.000 6.28 0.00 0.00 4.94
5181 5409 2.286365 CCTGAGGGCTTTAAACACCA 57.714 50.000 0.00 0.00 0.00 4.17
5198 5426 4.218578 CCTCGCAGCAGATCGCCT 62.219 66.667 6.02 0.00 44.04 5.52
5212 5440 1.349357 ACAGGTGAAGCTTTCCTCCTC 59.651 52.381 17.52 0.00 33.06 3.71
5216 5444 0.402121 GGGACAGGTGAAGCTTTCCT 59.598 55.000 15.45 15.45 0.00 3.36
5240 5468 2.282462 CGCCCAAACCCAGCTTCT 60.282 61.111 0.00 0.00 0.00 2.85
5249 5477 1.359459 CTAGGTTCGAGCGCCCAAAC 61.359 60.000 2.29 5.76 0.00 2.93
5255 5483 2.167861 CAAGCCTAGGTTCGAGCGC 61.168 63.158 11.31 0.00 0.00 5.92
5306 5534 1.098712 GTTGGGACCAAGCGTTGTCA 61.099 55.000 3.57 0.00 36.52 3.58
5309 5537 3.039134 GGTTGGGACCAAGCGTTG 58.961 61.111 16.43 0.00 45.77 4.10
5358 5586 8.692710 TCTTTTGACTACTCAATATACGGATGT 58.307 33.333 0.00 0.00 36.26 3.06
5411 5639 8.766000 TTTATTGTTGCTTCTCTACGATTACA 57.234 30.769 0.00 0.00 0.00 2.41
5433 5661 6.214191 TGAGGCTGTTGACAACAATTTTTA 57.786 33.333 20.91 4.92 41.61 1.52
5438 5668 3.290710 ACTTGAGGCTGTTGACAACAAT 58.709 40.909 20.91 10.63 41.61 2.71
5445 5675 1.677576 CAAGCAACTTGAGGCTGTTGA 59.322 47.619 17.47 0.00 43.42 3.18
5455 5685 6.072838 ACTCATGAGTCATAACAAGCAACTTG 60.073 38.462 22.89 5.80 41.34 3.16
5492 5722 7.952671 AGGCGATTTTCAAGTATATCACTCTA 58.047 34.615 0.00 0.00 36.04 2.43
5493 5723 6.821388 AGGCGATTTTCAAGTATATCACTCT 58.179 36.000 0.00 0.00 36.04 3.24
5494 5724 8.589335 TTAGGCGATTTTCAAGTATATCACTC 57.411 34.615 0.00 0.00 36.04 3.51
5516 5748 9.455847 GGTGCTCATATTTGCTTTTCTATTTAG 57.544 33.333 0.00 0.00 0.00 1.85
5543 5775 1.818674 GTTACTTGGTCATTGGCCCTG 59.181 52.381 4.51 0.00 0.00 4.45
5544 5776 1.710809 AGTTACTTGGTCATTGGCCCT 59.289 47.619 4.51 0.00 0.00 5.19
5560 5793 8.690203 TGAATTCATTCTCTTCCACAAAGTTA 57.310 30.769 3.38 0.00 37.67 2.24
5583 5816 3.261580 CTCTATTTCACCACACGCATGA 58.738 45.455 0.00 0.00 0.00 3.07
5589 5822 9.542462 TTATATTGTAGCTCTATTTCACCACAC 57.458 33.333 0.00 0.00 0.00 3.82
5590 5823 9.764363 CTTATATTGTAGCTCTATTTCACCACA 57.236 33.333 0.00 0.00 0.00 4.17
5591 5824 9.765795 ACTTATATTGTAGCTCTATTTCACCAC 57.234 33.333 0.00 0.00 0.00 4.16
5600 5833 9.197306 TGTCCTTGAACTTATATTGTAGCTCTA 57.803 33.333 0.00 0.00 0.00 2.43
5601 5834 8.079211 TGTCCTTGAACTTATATTGTAGCTCT 57.921 34.615 0.00 0.00 0.00 4.09
5602 5835 7.042389 GCTGTCCTTGAACTTATATTGTAGCTC 60.042 40.741 0.00 0.00 0.00 4.09
5603 5836 6.763610 GCTGTCCTTGAACTTATATTGTAGCT 59.236 38.462 0.00 0.00 0.00 3.32
5604 5837 6.538742 TGCTGTCCTTGAACTTATATTGTAGC 59.461 38.462 0.00 0.00 0.00 3.58
5605 5838 8.492673 TTGCTGTCCTTGAACTTATATTGTAG 57.507 34.615 0.00 0.00 0.00 2.74
5606 5839 8.856153 TTTGCTGTCCTTGAACTTATATTGTA 57.144 30.769 0.00 0.00 0.00 2.41
5607 5840 7.759489 TTTGCTGTCCTTGAACTTATATTGT 57.241 32.000 0.00 0.00 0.00 2.71
5608 5841 8.680903 AGATTTGCTGTCCTTGAACTTATATTG 58.319 33.333 0.00 0.00 0.00 1.90
5609 5842 8.814038 AGATTTGCTGTCCTTGAACTTATATT 57.186 30.769 0.00 0.00 0.00 1.28
5610 5843 8.814038 AAGATTTGCTGTCCTTGAACTTATAT 57.186 30.769 0.00 0.00 0.00 0.86
5611 5844 9.733556 TTAAGATTTGCTGTCCTTGAACTTATA 57.266 29.630 0.00 0.00 0.00 0.98
5612 5845 8.635765 TTAAGATTTGCTGTCCTTGAACTTAT 57.364 30.769 0.00 0.00 0.00 1.73
5613 5846 7.719633 ACTTAAGATTTGCTGTCCTTGAACTTA 59.280 33.333 10.09 0.00 0.00 2.24
5614 5847 6.547510 ACTTAAGATTTGCTGTCCTTGAACTT 59.452 34.615 10.09 0.00 0.00 2.66
5615 5848 6.064717 ACTTAAGATTTGCTGTCCTTGAACT 58.935 36.000 10.09 0.00 0.00 3.01
5616 5849 6.319141 ACTTAAGATTTGCTGTCCTTGAAC 57.681 37.500 10.09 0.00 0.00 3.18
5617 5850 6.959639 AACTTAAGATTTGCTGTCCTTGAA 57.040 33.333 10.09 0.00 0.00 2.69
5618 5851 7.362056 GCATAACTTAAGATTTGCTGTCCTTGA 60.362 37.037 17.06 0.00 0.00 3.02
5619 5852 6.749118 GCATAACTTAAGATTTGCTGTCCTTG 59.251 38.462 17.06 0.00 0.00 3.61
5620 5853 6.434028 TGCATAACTTAAGATTTGCTGTCCTT 59.566 34.615 22.16 1.94 0.00 3.36
5621 5854 5.945784 TGCATAACTTAAGATTTGCTGTCCT 59.054 36.000 22.16 0.00 0.00 3.85
5622 5855 6.194796 TGCATAACTTAAGATTTGCTGTCC 57.805 37.500 22.16 1.96 0.00 4.02
5623 5856 7.253883 GCAATGCATAACTTAAGATTTGCTGTC 60.254 37.037 22.16 10.46 35.34 3.51
5624 5857 6.532657 GCAATGCATAACTTAAGATTTGCTGT 59.467 34.615 22.16 12.40 35.34 4.40
5625 5858 6.019318 GGCAATGCATAACTTAAGATTTGCTG 60.019 38.462 22.16 16.23 37.62 4.41
5626 5859 6.044682 GGCAATGCATAACTTAAGATTTGCT 58.955 36.000 22.16 10.26 37.62 3.91
5627 5860 5.811613 TGGCAATGCATAACTTAAGATTTGC 59.188 36.000 17.36 17.36 36.96 3.68
5628 5861 7.830940 TTGGCAATGCATAACTTAAGATTTG 57.169 32.000 10.09 4.12 0.00 2.32
5630 5863 9.701098 CATATTGGCAATGCATAACTTAAGATT 57.299 29.630 22.57 2.67 0.00 2.40
5631 5864 8.863086 ACATATTGGCAATGCATAACTTAAGAT 58.137 29.630 22.57 0.00 0.00 2.40
5632 5865 8.236585 ACATATTGGCAATGCATAACTTAAGA 57.763 30.769 22.57 0.00 0.00 2.10
5633 5866 7.324375 CGACATATTGGCAATGCATAACTTAAG 59.676 37.037 22.57 0.00 0.00 1.85
5634 5867 7.138081 CGACATATTGGCAATGCATAACTTAA 58.862 34.615 22.57 0.00 0.00 1.85
5635 5868 6.293900 CCGACATATTGGCAATGCATAACTTA 60.294 38.462 22.57 0.00 0.00 2.24
5636 5869 5.507817 CCGACATATTGGCAATGCATAACTT 60.508 40.000 22.57 0.00 0.00 2.66
5637 5870 4.022935 CCGACATATTGGCAATGCATAACT 60.023 41.667 22.57 0.00 0.00 2.24
5638 5871 4.229096 CCGACATATTGGCAATGCATAAC 58.771 43.478 22.57 8.10 0.00 1.89
5639 5872 3.888323 ACCGACATATTGGCAATGCATAA 59.112 39.130 22.57 2.31 31.43 1.90
5640 5873 3.485394 ACCGACATATTGGCAATGCATA 58.515 40.909 22.57 2.72 31.43 3.14
5641 5874 2.309613 ACCGACATATTGGCAATGCAT 58.690 42.857 22.57 6.32 31.43 3.96
5642 5875 1.761449 ACCGACATATTGGCAATGCA 58.239 45.000 22.57 3.91 31.43 3.96
5643 5876 2.869233 AACCGACATATTGGCAATGC 57.131 45.000 22.57 0.00 31.43 3.56
5644 5877 5.065859 TGAACTAACCGACATATTGGCAATG 59.934 40.000 22.57 11.04 31.43 2.82
5645 5878 5.189928 TGAACTAACCGACATATTGGCAAT 58.810 37.500 18.01 18.01 31.43 3.56
5646 5879 4.580868 TGAACTAACCGACATATTGGCAA 58.419 39.130 0.68 0.68 31.43 4.52
5647 5880 4.209307 TGAACTAACCGACATATTGGCA 57.791 40.909 0.00 0.00 31.43 4.92
5648 5881 4.634443 AGTTGAACTAACCGACATATTGGC 59.366 41.667 0.00 0.00 40.24 4.52
5649 5882 5.872617 TCAGTTGAACTAACCGACATATTGG 59.127 40.000 0.00 0.00 40.24 3.16
5650 5883 6.961359 TCAGTTGAACTAACCGACATATTG 57.039 37.500 0.00 0.00 40.24 1.90
5651 5884 7.660208 AGTTTCAGTTGAACTAACCGACATATT 59.340 33.333 0.00 0.00 40.24 1.28
5652 5885 7.117812 CAGTTTCAGTTGAACTAACCGACATAT 59.882 37.037 0.00 0.00 40.24 1.78
5653 5886 6.422701 CAGTTTCAGTTGAACTAACCGACATA 59.577 38.462 0.00 0.00 40.24 2.29
5654 5887 5.236478 CAGTTTCAGTTGAACTAACCGACAT 59.764 40.000 0.00 0.00 40.24 3.06
5655 5888 4.569162 CAGTTTCAGTTGAACTAACCGACA 59.431 41.667 0.00 0.00 40.24 4.35
5656 5889 4.569564 ACAGTTTCAGTTGAACTAACCGAC 59.430 41.667 0.00 0.00 40.24 4.79
5657 5890 4.761975 ACAGTTTCAGTTGAACTAACCGA 58.238 39.130 0.00 0.00 40.24 4.69
5658 5891 4.317839 CGACAGTTTCAGTTGAACTAACCG 60.318 45.833 0.00 0.00 40.24 4.44
5659 5892 4.025145 CCGACAGTTTCAGTTGAACTAACC 60.025 45.833 0.00 0.00 40.24 2.85
5660 5893 4.569564 ACCGACAGTTTCAGTTGAACTAAC 59.430 41.667 0.00 0.00 39.65 2.34
5661 5894 4.569162 CACCGACAGTTTCAGTTGAACTAA 59.431 41.667 0.00 0.00 33.13 2.24
5662 5895 4.116961 CACCGACAGTTTCAGTTGAACTA 58.883 43.478 0.00 0.00 33.13 2.24
5663 5896 2.936498 CACCGACAGTTTCAGTTGAACT 59.064 45.455 0.00 0.00 33.13 3.01
5664 5897 2.933906 TCACCGACAGTTTCAGTTGAAC 59.066 45.455 0.00 0.00 33.13 3.18
5665 5898 3.254470 TCACCGACAGTTTCAGTTGAA 57.746 42.857 0.00 0.00 0.00 2.69
5666 5899 2.971660 TCACCGACAGTTTCAGTTGA 57.028 45.000 0.00 0.00 0.00 3.18
5667 5900 4.552166 AAATCACCGACAGTTTCAGTTG 57.448 40.909 0.00 0.00 0.00 3.16
5668 5901 5.365619 ACTAAATCACCGACAGTTTCAGTT 58.634 37.500 0.00 0.00 0.00 3.16
5669 5902 4.957296 ACTAAATCACCGACAGTTTCAGT 58.043 39.130 0.00 0.00 0.00 3.41
5670 5903 4.988540 TGACTAAATCACCGACAGTTTCAG 59.011 41.667 0.00 0.00 29.99 3.02
5671 5904 4.951254 TGACTAAATCACCGACAGTTTCA 58.049 39.130 0.00 0.00 29.99 2.69
5672 5905 5.637810 TGATGACTAAATCACCGACAGTTTC 59.362 40.000 0.00 0.00 41.24 2.78
5673 5906 5.547465 TGATGACTAAATCACCGACAGTTT 58.453 37.500 0.00 0.00 41.24 2.66
5674 5907 5.147330 TGATGACTAAATCACCGACAGTT 57.853 39.130 0.00 0.00 41.24 3.16
5675 5908 4.748892 CTGATGACTAAATCACCGACAGT 58.251 43.478 0.00 0.00 41.24 3.55
5676 5909 3.553511 GCTGATGACTAAATCACCGACAG 59.446 47.826 0.00 0.00 41.24 3.51
5677 5910 3.056179 TGCTGATGACTAAATCACCGACA 60.056 43.478 0.00 0.00 41.24 4.35
5678 5911 3.521560 TGCTGATGACTAAATCACCGAC 58.478 45.455 0.00 0.00 41.24 4.79
5679 5912 3.430790 CCTGCTGATGACTAAATCACCGA 60.431 47.826 0.00 0.00 41.24 4.69
5680 5913 2.868583 CCTGCTGATGACTAAATCACCG 59.131 50.000 0.00 0.00 41.24 4.94
5681 5914 4.142609 TCCTGCTGATGACTAAATCACC 57.857 45.455 0.00 0.00 41.24 4.02
5682 5915 6.690194 AAATCCTGCTGATGACTAAATCAC 57.310 37.500 0.00 0.00 41.24 3.06
5683 5916 7.795047 TCTAAATCCTGCTGATGACTAAATCA 58.205 34.615 0.00 0.00 43.13 2.57
5684 5917 7.930865 ACTCTAAATCCTGCTGATGACTAAATC 59.069 37.037 0.00 0.00 32.68 2.17
5685 5918 7.800092 ACTCTAAATCCTGCTGATGACTAAAT 58.200 34.615 0.00 0.00 32.68 1.40
5686 5919 7.187824 ACTCTAAATCCTGCTGATGACTAAA 57.812 36.000 0.00 0.00 32.68 1.85
5687 5920 6.798427 ACTCTAAATCCTGCTGATGACTAA 57.202 37.500 0.00 0.00 32.68 2.24
5688 5921 7.063593 ACTACTCTAAATCCTGCTGATGACTA 58.936 38.462 0.00 0.00 32.68 2.59
5689 5922 5.896678 ACTACTCTAAATCCTGCTGATGACT 59.103 40.000 0.00 0.00 32.68 3.41
5690 5923 6.155475 ACTACTCTAAATCCTGCTGATGAC 57.845 41.667 0.00 0.00 32.68 3.06
5691 5924 5.893824 TGACTACTCTAAATCCTGCTGATGA 59.106 40.000 0.00 0.00 32.68 2.92
5692 5925 6.154203 TGACTACTCTAAATCCTGCTGATG 57.846 41.667 0.00 0.00 32.68 3.07
5693 5926 5.304101 CCTGACTACTCTAAATCCTGCTGAT 59.696 44.000 0.00 0.00 34.22 2.90
5694 5927 4.646945 CCTGACTACTCTAAATCCTGCTGA 59.353 45.833 0.00 0.00 0.00 4.26
5695 5928 4.942852 CCTGACTACTCTAAATCCTGCTG 58.057 47.826 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.