Multiple sequence alignment - TraesCS6B01G159900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G159900 chr6B 100.000 2270 0 0 1 2270 163948229 163945960 0 4193
1 TraesCS6B01G159900 chr3B 97.732 1367 27 2 1 1364 112904350 112905715 0 2350
2 TraesCS6B01G159900 chr7A 94.624 1358 70 3 6 1361 538983111 538984467 0 2100
3 TraesCS6B01G159900 chr5D 94.764 1184 53 6 186 1364 464404597 464405776 0 1834
4 TraesCS6B01G159900 chr1D 90.522 1361 124 5 6 1364 361103131 361101774 0 1794
5 TraesCS6B01G159900 chr3A 89.993 1369 127 8 4 1364 472766299 472764933 0 1760
6 TraesCS6B01G159900 chr1B 93.395 1196 68 4 174 1364 668206897 668208086 0 1760
7 TraesCS6B01G159900 chr1B 89.993 1359 130 5 6 1360 198408527 198407171 0 1751
8 TraesCS6B01G159900 chr1B 89.729 1363 128 8 6 1364 381501786 381500432 0 1731
9 TraesCS6B01G159900 chr4B 89.698 1359 131 7 9 1364 105360438 105359086 0 1725


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G159900 chr6B 163945960 163948229 2269 True 4193 4193 100.000 1 2270 1 chr6B.!!$R1 2269
1 TraesCS6B01G159900 chr3B 112904350 112905715 1365 False 2350 2350 97.732 1 1364 1 chr3B.!!$F1 1363
2 TraesCS6B01G159900 chr7A 538983111 538984467 1356 False 2100 2100 94.624 6 1361 1 chr7A.!!$F1 1355
3 TraesCS6B01G159900 chr5D 464404597 464405776 1179 False 1834 1834 94.764 186 1364 1 chr5D.!!$F1 1178
4 TraesCS6B01G159900 chr1D 361101774 361103131 1357 True 1794 1794 90.522 6 1364 1 chr1D.!!$R1 1358
5 TraesCS6B01G159900 chr3A 472764933 472766299 1366 True 1760 1760 89.993 4 1364 1 chr3A.!!$R1 1360
6 TraesCS6B01G159900 chr1B 668206897 668208086 1189 False 1760 1760 93.395 174 1364 1 chr1B.!!$F1 1190
7 TraesCS6B01G159900 chr1B 198407171 198408527 1356 True 1751 1751 89.993 6 1360 1 chr1B.!!$R1 1354
8 TraesCS6B01G159900 chr1B 381500432 381501786 1354 True 1731 1731 89.729 6 1364 1 chr1B.!!$R2 1358
9 TraesCS6B01G159900 chr4B 105359086 105360438 1352 True 1725 1725 89.698 9 1364 1 chr4B.!!$R1 1355

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
307 308 0.901827 TAGGCGTGCTCAATCTGGAA 59.098 50.0 0.0 0.0 0.0 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1292 1310 0.031994 ACAAATGCCACAAAGCGGTC 59.968 50.0 0.0 0.0 34.65 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
159 160 1.378646 TCACGCCTCTCGACATCCT 60.379 57.895 0.00 0.00 41.67 3.24
183 184 4.301072 TGGAGGTGCTAAAAGCTATTGT 57.699 40.909 0.03 0.00 42.97 2.71
307 308 0.901827 TAGGCGTGCTCAATCTGGAA 59.098 50.000 0.00 0.00 0.00 3.53
551 552 3.486383 TCACGCAAAAAGAATTCCTCCT 58.514 40.909 0.65 0.00 0.00 3.69
1077 1086 3.058224 GGAACAACAACCTTCAGATTCGG 60.058 47.826 0.00 0.00 0.00 4.30
1364 1384 6.063640 GCAAATCTTTTGCCTTGTTTCAAT 57.936 33.333 12.74 0.00 39.38 2.57
1365 1385 6.497437 GCAAATCTTTTGCCTTGTTTCAATT 58.503 32.000 12.74 0.00 39.38 2.32
1366 1386 6.974048 GCAAATCTTTTGCCTTGTTTCAATTT 59.026 30.769 12.74 0.00 39.38 1.82
1367 1387 7.488792 GCAAATCTTTTGCCTTGTTTCAATTTT 59.511 29.630 12.74 0.00 39.38 1.82
1368 1388 9.356433 CAAATCTTTTGCCTTGTTTCAATTTTT 57.644 25.926 0.00 0.00 0.00 1.94
1398 1418 9.391006 TGAAGATGTAAAAGTAAGTCTGTTTGT 57.609 29.630 0.00 0.00 0.00 2.83
1399 1419 9.651718 GAAGATGTAAAAGTAAGTCTGTTTGTG 57.348 33.333 0.00 0.00 0.00 3.33
1400 1420 8.732746 AGATGTAAAAGTAAGTCTGTTTGTGT 57.267 30.769 0.00 0.00 0.00 3.72
1401 1421 8.612619 AGATGTAAAAGTAAGTCTGTTTGTGTG 58.387 33.333 0.00 0.00 0.00 3.82
1402 1422 7.675962 TGTAAAAGTAAGTCTGTTTGTGTGT 57.324 32.000 0.00 0.00 0.00 3.72
1403 1423 8.101654 TGTAAAAGTAAGTCTGTTTGTGTGTT 57.898 30.769 0.00 0.00 0.00 3.32
1404 1424 9.217278 TGTAAAAGTAAGTCTGTTTGTGTGTTA 57.783 29.630 0.00 0.00 0.00 2.41
1405 1425 9.698617 GTAAAAGTAAGTCTGTTTGTGTGTTAG 57.301 33.333 0.00 0.00 0.00 2.34
1406 1426 8.556213 AAAAGTAAGTCTGTTTGTGTGTTAGA 57.444 30.769 0.00 0.00 0.00 2.10
1407 1427 7.772332 AAGTAAGTCTGTTTGTGTGTTAGAG 57.228 36.000 0.00 0.00 0.00 2.43
1408 1428 6.281405 AGTAAGTCTGTTTGTGTGTTAGAGG 58.719 40.000 0.00 0.00 0.00 3.69
1409 1429 3.467803 AGTCTGTTTGTGTGTTAGAGGC 58.532 45.455 0.00 0.00 0.00 4.70
1410 1430 2.221055 GTCTGTTTGTGTGTTAGAGGCG 59.779 50.000 0.00 0.00 0.00 5.52
1411 1431 2.159014 TCTGTTTGTGTGTTAGAGGCGT 60.159 45.455 0.00 0.00 0.00 5.68
1412 1432 1.937223 TGTTTGTGTGTTAGAGGCGTG 59.063 47.619 0.00 0.00 0.00 5.34
1413 1433 0.941542 TTTGTGTGTTAGAGGCGTGC 59.058 50.000 0.00 0.00 0.00 5.34
1414 1434 0.179070 TTGTGTGTTAGAGGCGTGCA 60.179 50.000 0.00 0.00 0.00 4.57
1415 1435 0.878523 TGTGTGTTAGAGGCGTGCAC 60.879 55.000 6.82 6.82 0.00 4.57
1416 1436 0.878523 GTGTGTTAGAGGCGTGCACA 60.879 55.000 18.64 0.00 37.68 4.57
1417 1437 0.034756 TGTGTTAGAGGCGTGCACAT 59.965 50.000 18.64 1.16 35.48 3.21
1418 1438 1.156736 GTGTTAGAGGCGTGCACATT 58.843 50.000 18.64 0.42 0.00 2.71
1419 1439 1.135972 GTGTTAGAGGCGTGCACATTG 60.136 52.381 18.64 1.23 0.00 2.82
1420 1440 0.447801 GTTAGAGGCGTGCACATTGG 59.552 55.000 18.64 0.81 0.00 3.16
1421 1441 1.305219 TTAGAGGCGTGCACATTGGC 61.305 55.000 18.64 13.02 0.00 4.52
1422 1442 2.462125 TAGAGGCGTGCACATTGGCA 62.462 55.000 18.64 0.00 42.53 4.92
1428 1448 4.024143 TGCACATTGGCACGACGC 62.024 61.111 0.00 0.00 39.25 5.19
1450 1470 4.854924 CGGGGCATGTGCGGATCA 62.855 66.667 0.00 0.00 43.26 2.92
1451 1471 2.203394 GGGGCATGTGCGGATCAT 60.203 61.111 0.00 0.00 43.26 2.45
1452 1472 2.558286 GGGGCATGTGCGGATCATG 61.558 63.158 12.68 12.68 43.58 3.07
1453 1473 1.526686 GGGCATGTGCGGATCATGA 60.527 57.895 18.50 0.00 43.47 3.07
1454 1474 1.512996 GGGCATGTGCGGATCATGAG 61.513 60.000 18.50 0.00 43.47 2.90
1455 1475 1.512996 GGCATGTGCGGATCATGAGG 61.513 60.000 18.50 0.00 43.47 3.86
1456 1476 1.947013 CATGTGCGGATCATGAGGC 59.053 57.895 11.95 5.40 43.47 4.70
1457 1477 1.228063 ATGTGCGGATCATGAGGCC 60.228 57.895 0.09 4.39 0.00 5.19
1459 1479 4.240103 TGCGGATCATGAGGCCGG 62.240 66.667 29.73 17.55 44.92 6.13
1460 1480 3.928779 GCGGATCATGAGGCCGGA 61.929 66.667 29.73 0.00 44.92 5.14
1461 1481 2.341543 CGGATCATGAGGCCGGAG 59.658 66.667 24.56 4.69 41.29 4.63
1462 1482 2.502492 CGGATCATGAGGCCGGAGT 61.502 63.158 24.56 0.00 41.29 3.85
1463 1483 1.369321 GGATCATGAGGCCGGAGTC 59.631 63.158 5.05 0.00 0.00 3.36
1464 1484 1.402896 GGATCATGAGGCCGGAGTCA 61.403 60.000 5.05 7.23 0.00 3.41
1465 1485 0.683973 GATCATGAGGCCGGAGTCAT 59.316 55.000 5.05 9.67 0.00 3.06
1466 1486 0.395686 ATCATGAGGCCGGAGTCATG 59.604 55.000 28.29 28.29 0.00 3.07
1467 1487 1.890979 CATGAGGCCGGAGTCATGC 60.891 63.158 25.12 1.67 0.00 4.06
1468 1488 3.451556 ATGAGGCCGGAGTCATGCG 62.452 63.158 16.03 0.00 40.40 4.73
1469 1489 3.838271 GAGGCCGGAGTCATGCGA 61.838 66.667 5.05 0.00 43.94 5.10
1470 1490 4.148825 AGGCCGGAGTCATGCGAC 62.149 66.667 5.05 0.00 43.94 5.19
1471 1491 4.451150 GGCCGGAGTCATGCGACA 62.451 66.667 5.05 0.00 45.23 4.35
1472 1492 3.188786 GCCGGAGTCATGCGACAC 61.189 66.667 5.05 0.00 45.23 3.67
1473 1493 2.880879 CCGGAGTCATGCGACACG 60.881 66.667 0.00 0.00 45.23 4.49
1474 1494 2.178273 CGGAGTCATGCGACACGA 59.822 61.111 0.00 0.00 45.23 4.35
1475 1495 1.869574 CGGAGTCATGCGACACGAG 60.870 63.158 0.00 0.00 45.23 4.18
1476 1496 2.161486 GGAGTCATGCGACACGAGC 61.161 63.158 0.00 0.00 45.23 5.03
1477 1497 2.125912 AGTCATGCGACACGAGCC 60.126 61.111 0.00 0.00 45.23 4.70
1478 1498 3.188786 GTCATGCGACACGAGCCC 61.189 66.667 0.00 0.00 42.13 5.19
1479 1499 4.794439 TCATGCGACACGAGCCCG 62.794 66.667 0.00 0.00 42.50 6.13
1480 1500 4.794439 CATGCGACACGAGCCCGA 62.794 66.667 0.00 0.00 39.50 5.14
1481 1501 4.498520 ATGCGACACGAGCCCGAG 62.499 66.667 0.00 0.00 39.50 4.63
1484 1504 4.477975 CGACACGAGCCCGAGGAC 62.478 72.222 0.00 0.00 39.50 3.85
1485 1505 4.131088 GACACGAGCCCGAGGACC 62.131 72.222 0.00 0.00 39.50 4.46
1486 1506 4.680537 ACACGAGCCCGAGGACCT 62.681 66.667 0.00 0.00 39.50 3.85
1487 1507 4.135153 CACGAGCCCGAGGACCTG 62.135 72.222 0.00 0.00 39.50 4.00
1488 1508 4.361971 ACGAGCCCGAGGACCTGA 62.362 66.667 0.00 0.00 39.50 3.86
1489 1509 3.522731 CGAGCCCGAGGACCTGAG 61.523 72.222 0.00 0.00 38.22 3.35
1490 1510 2.043852 GAGCCCGAGGACCTGAGA 60.044 66.667 0.00 0.00 0.00 3.27
1491 1511 2.043450 AGCCCGAGGACCTGAGAG 60.043 66.667 0.00 0.00 0.00 3.20
1492 1512 3.151022 GCCCGAGGACCTGAGAGG 61.151 72.222 0.00 0.00 42.49 3.69
1493 1513 2.443016 CCCGAGGACCTGAGAGGG 60.443 72.222 0.00 2.36 40.58 4.30
1494 1514 2.684104 CCGAGGACCTGAGAGGGA 59.316 66.667 0.00 0.00 40.58 4.20
1495 1515 1.000486 CCGAGGACCTGAGAGGGAA 60.000 63.158 0.00 0.00 40.58 3.97
1496 1516 1.324005 CCGAGGACCTGAGAGGGAAC 61.324 65.000 0.00 0.00 40.58 3.62
1509 1529 3.728772 GGAACCACCCTCCTCTCC 58.271 66.667 0.00 0.00 0.00 3.71
1510 1530 1.996187 GGAACCACCCTCCTCTCCC 60.996 68.421 0.00 0.00 0.00 4.30
1511 1531 1.996187 GAACCACCCTCCTCTCCCC 60.996 68.421 0.00 0.00 0.00 4.81
1512 1532 3.925914 AACCACCCTCCTCTCCCCG 62.926 68.421 0.00 0.00 0.00 5.73
1518 1538 3.068691 CTCCTCTCCCCGCGTCAA 61.069 66.667 4.92 0.00 0.00 3.18
1519 1539 3.358076 CTCCTCTCCCCGCGTCAAC 62.358 68.421 4.92 0.00 0.00 3.18
1520 1540 4.796231 CCTCTCCCCGCGTCAACG 62.796 72.222 4.92 0.00 43.27 4.10
1521 1541 3.744719 CTCTCCCCGCGTCAACGA 61.745 66.667 4.92 0.00 43.02 3.85
1522 1542 3.966026 CTCTCCCCGCGTCAACGAC 62.966 68.421 4.92 0.00 43.02 4.34
1526 1546 4.953868 CCCGCGTCAACGACCACA 62.954 66.667 4.92 0.00 43.02 4.17
1527 1547 2.736995 CCGCGTCAACGACCACAT 60.737 61.111 4.92 0.00 43.02 3.21
1528 1548 2.726691 CCGCGTCAACGACCACATC 61.727 63.158 4.92 0.00 43.02 3.06
1529 1549 2.726691 CGCGTCAACGACCACATCC 61.727 63.158 6.75 0.00 43.02 3.51
1530 1550 2.388232 GCGTCAACGACCACATCCC 61.388 63.158 6.75 0.00 43.02 3.85
1531 1551 1.740296 CGTCAACGACCACATCCCC 60.740 63.158 0.00 0.00 43.02 4.81
1532 1552 1.677552 GTCAACGACCACATCCCCT 59.322 57.895 0.00 0.00 0.00 4.79
1533 1553 0.391263 GTCAACGACCACATCCCCTC 60.391 60.000 0.00 0.00 0.00 4.30
1534 1554 1.447838 CAACGACCACATCCCCTCG 60.448 63.158 0.00 0.00 0.00 4.63
1535 1555 2.656069 AACGACCACATCCCCTCGG 61.656 63.158 0.00 0.00 0.00 4.63
1536 1556 4.530857 CGACCACATCCCCTCGGC 62.531 72.222 0.00 0.00 0.00 5.54
1537 1557 4.176752 GACCACATCCCCTCGGCC 62.177 72.222 0.00 0.00 0.00 6.13
1539 1559 4.181010 CCACATCCCCTCGGCCAG 62.181 72.222 2.24 0.00 0.00 4.85
1540 1560 4.864334 CACATCCCCTCGGCCAGC 62.864 72.222 2.24 0.00 0.00 4.85
1561 1581 3.017581 GCCACCCTCCAGTCCCAT 61.018 66.667 0.00 0.00 0.00 4.00
1562 1582 3.001514 CCACCCTCCAGTCCCATG 58.998 66.667 0.00 0.00 0.00 3.66
1563 1583 2.683465 CCACCCTCCAGTCCCATGG 61.683 68.421 4.14 4.14 42.11 3.66
1564 1584 2.286425 ACCCTCCAGTCCCATGGG 60.286 66.667 26.30 26.30 41.01 4.00
1565 1585 3.099170 CCCTCCAGTCCCATGGGG 61.099 72.222 30.93 14.69 46.11 4.96
1566 1586 3.813724 CCTCCAGTCCCATGGGGC 61.814 72.222 29.08 29.08 43.94 5.80
1567 1587 3.813724 CTCCAGTCCCATGGGGCC 61.814 72.222 32.22 21.18 43.94 5.80
1590 1610 3.793144 GCTCGGTGCGCTCCTTTG 61.793 66.667 24.75 15.29 0.00 2.77
1591 1611 3.121030 CTCGGTGCGCTCCTTTGG 61.121 66.667 24.75 10.48 0.00 3.28
1592 1612 3.883744 CTCGGTGCGCTCCTTTGGT 62.884 63.158 24.75 0.00 0.00 3.67
1593 1613 2.978010 CGGTGCGCTCCTTTGGTT 60.978 61.111 24.75 0.00 0.00 3.67
1594 1614 2.954611 GGTGCGCTCCTTTGGTTC 59.045 61.111 20.97 0.00 0.00 3.62
1595 1615 2.626780 GGTGCGCTCCTTTGGTTCC 61.627 63.158 20.97 0.00 0.00 3.62
1596 1616 2.668212 TGCGCTCCTTTGGTTCCG 60.668 61.111 9.73 0.00 0.00 4.30
1597 1617 4.103103 GCGCTCCTTTGGTTCCGC 62.103 66.667 0.00 0.00 34.50 5.54
1598 1618 3.431725 CGCTCCTTTGGTTCCGCC 61.432 66.667 0.00 0.00 37.90 6.13
1599 1619 3.062466 GCTCCTTTGGTTCCGCCC 61.062 66.667 0.00 0.00 36.04 6.13
1600 1620 2.746277 CTCCTTTGGTTCCGCCCG 60.746 66.667 0.00 0.00 36.04 6.13
1603 1623 3.431725 CTTTGGTTCCGCCCGCTC 61.432 66.667 0.00 0.00 36.04 5.03
1617 1637 4.724602 GCTCCAGCTCGTGCGACA 62.725 66.667 3.48 0.00 45.42 4.35
1618 1638 2.505777 CTCCAGCTCGTGCGACAG 60.506 66.667 3.48 0.00 45.42 3.51
1619 1639 4.724602 TCCAGCTCGTGCGACAGC 62.725 66.667 3.48 0.00 45.42 4.40
1641 1661 4.218686 GGTGGGGCCAACCTGTGT 62.219 66.667 23.74 0.00 40.03 3.72
1642 1662 2.597510 GTGGGGCCAACCTGTGTC 60.598 66.667 4.39 0.00 40.03 3.67
1643 1663 3.897122 TGGGGCCAACCTGTGTCC 61.897 66.667 4.39 0.00 40.03 4.02
1644 1664 3.897122 GGGGCCAACCTGTGTCCA 61.897 66.667 4.39 0.00 40.03 4.02
1645 1665 2.440599 GGGCCAACCTGTGTCCAT 59.559 61.111 4.39 0.00 35.85 3.41
1646 1666 1.678970 GGGCCAACCTGTGTCCATC 60.679 63.158 4.39 0.00 35.85 3.51
1647 1667 1.678970 GGCCAACCTGTGTCCATCC 60.679 63.158 0.00 0.00 0.00 3.51
1648 1668 1.678970 GCCAACCTGTGTCCATCCC 60.679 63.158 0.00 0.00 0.00 3.85
1649 1669 1.767036 CCAACCTGTGTCCATCCCA 59.233 57.895 0.00 0.00 0.00 4.37
1650 1670 0.322816 CCAACCTGTGTCCATCCCAG 60.323 60.000 0.00 0.00 0.00 4.45
1651 1671 0.692476 CAACCTGTGTCCATCCCAGA 59.308 55.000 0.00 0.00 0.00 3.86
1652 1672 1.283029 CAACCTGTGTCCATCCCAGAT 59.717 52.381 0.00 0.00 0.00 2.90
1653 1673 1.207791 ACCTGTGTCCATCCCAGATC 58.792 55.000 0.00 0.00 0.00 2.75
1654 1674 1.274069 ACCTGTGTCCATCCCAGATCT 60.274 52.381 0.00 0.00 0.00 2.75
1655 1675 1.140452 CCTGTGTCCATCCCAGATCTG 59.860 57.143 16.24 16.24 0.00 2.90
1656 1676 0.543277 TGTGTCCATCCCAGATCTGC 59.457 55.000 17.76 2.28 0.00 4.26
1657 1677 0.179034 GTGTCCATCCCAGATCTGCC 60.179 60.000 17.76 0.00 0.00 4.85
1658 1678 1.348008 TGTCCATCCCAGATCTGCCC 61.348 60.000 17.76 0.15 0.00 5.36
1659 1679 1.059006 GTCCATCCCAGATCTGCCCT 61.059 60.000 17.76 0.27 0.00 5.19
1660 1680 0.327867 TCCATCCCAGATCTGCCCTT 60.328 55.000 17.76 0.00 0.00 3.95
1661 1681 0.178998 CCATCCCAGATCTGCCCTTG 60.179 60.000 17.76 10.89 0.00 3.61
1662 1682 0.822532 CATCCCAGATCTGCCCTTGC 60.823 60.000 17.76 0.00 38.26 4.01
1663 1683 2.004408 ATCCCAGATCTGCCCTTGCC 62.004 60.000 17.76 0.00 36.33 4.52
1664 1684 2.687610 CCCAGATCTGCCCTTGCCT 61.688 63.158 17.76 0.00 36.33 4.75
1665 1685 1.348008 CCCAGATCTGCCCTTGCCTA 61.348 60.000 17.76 0.00 36.33 3.93
1666 1686 0.108207 CCAGATCTGCCCTTGCCTAG 59.892 60.000 17.76 0.00 36.33 3.02
1667 1687 0.835941 CAGATCTGCCCTTGCCTAGT 59.164 55.000 10.38 0.00 36.33 2.57
1668 1688 0.835941 AGATCTGCCCTTGCCTAGTG 59.164 55.000 0.00 0.00 36.33 2.74
1669 1689 0.179034 GATCTGCCCTTGCCTAGTGG 60.179 60.000 0.00 0.00 36.33 4.00
1670 1690 0.916358 ATCTGCCCTTGCCTAGTGGT 60.916 55.000 0.00 0.00 36.33 4.16
1671 1691 1.078143 CTGCCCTTGCCTAGTGGTC 60.078 63.158 0.00 0.00 36.33 4.02
1672 1692 1.841302 CTGCCCTTGCCTAGTGGTCA 61.841 60.000 0.00 0.00 36.33 4.02
1673 1693 1.078143 GCCCTTGCCTAGTGGTCAG 60.078 63.158 0.00 0.00 35.27 3.51
1674 1694 1.842381 GCCCTTGCCTAGTGGTCAGT 61.842 60.000 0.00 0.00 35.27 3.41
1675 1695 0.250513 CCCTTGCCTAGTGGTCAGTC 59.749 60.000 0.00 0.00 35.27 3.51
1676 1696 0.108615 CCTTGCCTAGTGGTCAGTCG 60.109 60.000 0.00 0.00 35.27 4.18
1677 1697 0.108615 CTTGCCTAGTGGTCAGTCGG 60.109 60.000 0.00 0.00 35.27 4.79
1678 1698 2.167398 TTGCCTAGTGGTCAGTCGGC 62.167 60.000 12.67 12.67 41.48 5.54
1679 1699 2.490217 CCTAGTGGTCAGTCGGCG 59.510 66.667 0.00 0.00 0.00 6.46
1680 1700 2.490217 CTAGTGGTCAGTCGGCGG 59.510 66.667 7.21 0.00 0.00 6.13
1681 1701 2.034532 TAGTGGTCAGTCGGCGGA 59.965 61.111 7.21 0.00 0.00 5.54
1682 1702 1.379443 TAGTGGTCAGTCGGCGGAT 60.379 57.895 7.21 0.00 0.00 4.18
1683 1703 1.381928 TAGTGGTCAGTCGGCGGATC 61.382 60.000 7.21 0.00 0.00 3.36
1684 1704 3.458163 TGGTCAGTCGGCGGATCC 61.458 66.667 7.21 0.00 0.00 3.36
1713 1733 4.832608 CGCCCCTAGCCCGTCAAC 62.833 72.222 0.00 0.00 38.78 3.18
1714 1734 4.832608 GCCCCTAGCCCGTCAACG 62.833 72.222 0.00 0.00 39.44 4.10
1724 1744 3.755404 CGTCAACGGCTCTCTTCG 58.245 61.111 0.00 0.00 35.37 3.79
1725 1745 1.209383 CGTCAACGGCTCTCTTCGA 59.791 57.895 0.00 0.00 35.37 3.71
1726 1746 1.066114 CGTCAACGGCTCTCTTCGAC 61.066 60.000 0.00 0.00 35.37 4.20
1727 1747 0.733223 GTCAACGGCTCTCTTCGACC 60.733 60.000 0.00 0.00 0.00 4.79
1728 1748 1.446272 CAACGGCTCTCTTCGACCC 60.446 63.158 0.00 0.00 0.00 4.46
1729 1749 1.606889 AACGGCTCTCTTCGACCCT 60.607 57.895 0.00 0.00 0.00 4.34
1730 1750 1.596895 AACGGCTCTCTTCGACCCTC 61.597 60.000 0.00 0.00 0.00 4.30
1731 1751 2.776913 CGGCTCTCTTCGACCCTCC 61.777 68.421 0.00 0.00 0.00 4.30
1732 1752 2.776913 GGCTCTCTTCGACCCTCCG 61.777 68.421 0.00 0.00 0.00 4.63
1733 1753 2.802106 CTCTCTTCGACCCTCCGC 59.198 66.667 0.00 0.00 0.00 5.54
1734 1754 2.754658 TCTCTTCGACCCTCCGCC 60.755 66.667 0.00 0.00 0.00 6.13
1735 1755 3.068691 CTCTTCGACCCTCCGCCA 61.069 66.667 0.00 0.00 0.00 5.69
1736 1756 2.363795 TCTTCGACCCTCCGCCAT 60.364 61.111 0.00 0.00 0.00 4.40
1737 1757 2.202932 CTTCGACCCTCCGCCATG 60.203 66.667 0.00 0.00 0.00 3.66
1738 1758 2.682136 TTCGACCCTCCGCCATGA 60.682 61.111 0.00 0.00 0.00 3.07
1739 1759 2.238847 CTTCGACCCTCCGCCATGAA 62.239 60.000 0.00 0.00 0.00 2.57
1740 1760 1.622607 TTCGACCCTCCGCCATGAAT 61.623 55.000 0.00 0.00 0.00 2.57
1741 1761 1.595382 CGACCCTCCGCCATGAATC 60.595 63.158 0.00 0.00 0.00 2.52
1742 1762 1.227973 GACCCTCCGCCATGAATCC 60.228 63.158 0.00 0.00 0.00 3.01
1743 1763 1.694169 ACCCTCCGCCATGAATCCT 60.694 57.895 0.00 0.00 0.00 3.24
1744 1764 1.228063 CCCTCCGCCATGAATCCTG 60.228 63.158 0.00 0.00 0.00 3.86
1745 1765 1.895707 CCTCCGCCATGAATCCTGC 60.896 63.158 0.00 0.00 0.00 4.85
1746 1766 1.147824 CTCCGCCATGAATCCTGCT 59.852 57.895 0.00 0.00 0.00 4.24
1747 1767 0.883814 CTCCGCCATGAATCCTGCTC 60.884 60.000 0.00 0.00 0.00 4.26
1748 1768 1.895707 CCGCCATGAATCCTGCTCC 60.896 63.158 0.00 0.00 0.00 4.70
1749 1769 2.249535 CGCCATGAATCCTGCTCCG 61.250 63.158 0.00 0.00 0.00 4.63
1750 1770 1.895707 GCCATGAATCCTGCTCCGG 60.896 63.158 0.00 0.00 0.00 5.14
1751 1771 1.228063 CCATGAATCCTGCTCCGGG 60.228 63.158 0.00 0.00 0.00 5.73
1752 1772 1.228063 CATGAATCCTGCTCCGGGG 60.228 63.158 0.00 0.00 0.00 5.73
1753 1773 2.455565 ATGAATCCTGCTCCGGGGG 61.456 63.158 1.90 0.00 0.00 5.40
1771 1791 2.435059 GAGTGCTCCAAGACCGCC 60.435 66.667 0.00 0.00 0.00 6.13
1772 1792 3.240134 GAGTGCTCCAAGACCGCCA 62.240 63.158 0.00 0.00 0.00 5.69
1773 1793 3.050275 GTGCTCCAAGACCGCCAC 61.050 66.667 0.00 0.00 0.00 5.01
1774 1794 4.329545 TGCTCCAAGACCGCCACC 62.330 66.667 0.00 0.00 0.00 4.61
1791 1811 3.291383 CGCCCTTTCCACGCCAAA 61.291 61.111 0.00 0.00 0.00 3.28
1792 1812 2.635443 CGCCCTTTCCACGCCAAAT 61.635 57.895 0.00 0.00 0.00 2.32
1793 1813 1.309499 CGCCCTTTCCACGCCAAATA 61.309 55.000 0.00 0.00 0.00 1.40
1794 1814 0.892063 GCCCTTTCCACGCCAAATAA 59.108 50.000 0.00 0.00 0.00 1.40
1795 1815 1.480545 GCCCTTTCCACGCCAAATAAT 59.519 47.619 0.00 0.00 0.00 1.28
1796 1816 2.738321 GCCCTTTCCACGCCAAATAATG 60.738 50.000 0.00 0.00 0.00 1.90
1797 1817 2.757868 CCCTTTCCACGCCAAATAATGA 59.242 45.455 0.00 0.00 0.00 2.57
1798 1818 3.384467 CCCTTTCCACGCCAAATAATGAT 59.616 43.478 0.00 0.00 0.00 2.45
1799 1819 4.582656 CCCTTTCCACGCCAAATAATGATA 59.417 41.667 0.00 0.00 0.00 2.15
1800 1820 5.278463 CCCTTTCCACGCCAAATAATGATAG 60.278 44.000 0.00 0.00 0.00 2.08
1801 1821 5.278463 CCTTTCCACGCCAAATAATGATAGG 60.278 44.000 0.00 0.00 0.00 2.57
1802 1822 3.750371 TCCACGCCAAATAATGATAGGG 58.250 45.455 0.00 0.00 0.00 3.53
1803 1823 2.819608 CCACGCCAAATAATGATAGGGG 59.180 50.000 0.00 0.00 38.18 4.79
1804 1824 3.486383 CACGCCAAATAATGATAGGGGT 58.514 45.455 0.00 0.00 45.01 4.95
1805 1825 3.888930 CACGCCAAATAATGATAGGGGTT 59.111 43.478 0.00 0.00 42.68 4.11
1806 1826 3.888930 ACGCCAAATAATGATAGGGGTTG 59.111 43.478 0.00 0.00 42.00 3.77
1807 1827 3.305335 CGCCAAATAATGATAGGGGTTGC 60.305 47.826 0.00 0.00 0.00 4.17
1808 1828 3.897505 GCCAAATAATGATAGGGGTTGCT 59.102 43.478 0.00 0.00 0.00 3.91
1809 1829 5.076873 GCCAAATAATGATAGGGGTTGCTA 58.923 41.667 0.00 0.00 0.00 3.49
1810 1830 5.183904 GCCAAATAATGATAGGGGTTGCTAG 59.816 44.000 0.00 0.00 0.00 3.42
1811 1831 5.711976 CCAAATAATGATAGGGGTTGCTAGG 59.288 44.000 0.00 0.00 0.00 3.02
1812 1832 6.306987 CAAATAATGATAGGGGTTGCTAGGT 58.693 40.000 0.00 0.00 0.00 3.08
1813 1833 6.530601 AATAATGATAGGGGTTGCTAGGTT 57.469 37.500 0.00 0.00 0.00 3.50
1814 1834 3.864789 ATGATAGGGGTTGCTAGGTTG 57.135 47.619 0.00 0.00 0.00 3.77
1815 1835 1.843851 TGATAGGGGTTGCTAGGTTGG 59.156 52.381 0.00 0.00 0.00 3.77
1816 1836 1.143073 GATAGGGGTTGCTAGGTTGGG 59.857 57.143 0.00 0.00 0.00 4.12
1817 1837 1.568118 TAGGGGTTGCTAGGTTGGGC 61.568 60.000 0.00 0.00 0.00 5.36
1818 1838 2.438795 GGGTTGCTAGGTTGGGCA 59.561 61.111 0.00 0.00 36.62 5.36
1819 1839 1.228737 GGGTTGCTAGGTTGGGCAA 60.229 57.895 0.00 0.00 44.64 4.52
1822 1842 3.763931 TTGCTAGGTTGGGCAACAT 57.236 47.368 0.00 0.00 42.45 2.71
1823 1843 2.008242 TTGCTAGGTTGGGCAACATT 57.992 45.000 0.00 0.00 42.45 2.71
1824 1844 1.255882 TGCTAGGTTGGGCAACATTG 58.744 50.000 0.00 0.00 42.85 2.82
1838 1858 4.114058 CAACATTGCCTTAAGTCCATGG 57.886 45.455 4.97 4.97 0.00 3.66
1839 1859 3.456380 ACATTGCCTTAAGTCCATGGT 57.544 42.857 12.58 0.00 0.00 3.55
1840 1860 3.091545 ACATTGCCTTAAGTCCATGGTG 58.908 45.455 12.58 0.00 0.00 4.17
1841 1861 2.214376 TTGCCTTAAGTCCATGGTGG 57.786 50.000 12.58 6.92 39.43 4.61
1842 1862 1.072266 TGCCTTAAGTCCATGGTGGT 58.928 50.000 12.58 0.13 39.03 4.16
1843 1863 1.004277 TGCCTTAAGTCCATGGTGGTC 59.996 52.381 12.58 1.43 39.03 4.02
1844 1864 1.282157 GCCTTAAGTCCATGGTGGTCT 59.718 52.381 12.58 3.81 37.51 3.85
1845 1865 2.290960 GCCTTAAGTCCATGGTGGTCTT 60.291 50.000 12.58 13.86 45.40 3.01
1846 1866 3.814316 GCCTTAAGTCCATGGTGGTCTTT 60.814 47.826 12.58 1.54 41.88 2.52
1847 1867 4.407365 CCTTAAGTCCATGGTGGTCTTTT 58.593 43.478 12.58 0.19 41.88 2.27
1848 1868 4.459337 CCTTAAGTCCATGGTGGTCTTTTC 59.541 45.833 12.58 0.00 41.88 2.29
1849 1869 2.185004 AGTCCATGGTGGTCTTTTCG 57.815 50.000 12.58 0.00 39.03 3.46
1850 1870 1.420138 AGTCCATGGTGGTCTTTTCGT 59.580 47.619 12.58 0.00 39.03 3.85
1851 1871 1.804748 GTCCATGGTGGTCTTTTCGTC 59.195 52.381 12.58 0.00 39.03 4.20
1852 1872 1.418264 TCCATGGTGGTCTTTTCGTCA 59.582 47.619 12.58 0.00 39.03 4.35
1853 1873 1.535462 CCATGGTGGTCTTTTCGTCAC 59.465 52.381 2.57 0.00 31.35 3.67
1855 1875 0.179040 TGGTGGTCTTTTCGTCACCC 60.179 55.000 8.60 0.00 46.54 4.61
1856 1876 0.887836 GGTGGTCTTTTCGTCACCCC 60.888 60.000 0.00 0.00 42.66 4.95
1857 1877 1.070105 TGGTCTTTTCGTCACCCCG 59.930 57.895 0.00 0.00 0.00 5.73
1858 1878 2.322830 GGTCTTTTCGTCACCCCGC 61.323 63.158 0.00 0.00 0.00 6.13
1859 1879 1.595929 GTCTTTTCGTCACCCCGCA 60.596 57.895 0.00 0.00 0.00 5.69
1860 1880 1.595929 TCTTTTCGTCACCCCGCAC 60.596 57.895 0.00 0.00 0.00 5.34
1861 1881 2.592287 TTTTCGTCACCCCGCACC 60.592 61.111 0.00 0.00 0.00 5.01
1862 1882 3.402095 TTTTCGTCACCCCGCACCA 62.402 57.895 0.00 0.00 0.00 4.17
1863 1883 3.818121 TTTCGTCACCCCGCACCAG 62.818 63.158 0.00 0.00 0.00 4.00
1896 1916 4.883240 CATGGCGATGGATGGACA 57.117 55.556 0.00 0.00 0.00 4.02
1897 1917 2.324215 CATGGCGATGGATGGACAC 58.676 57.895 0.00 0.00 0.00 3.67
1898 1918 0.179037 CATGGCGATGGATGGACACT 60.179 55.000 0.00 0.00 0.00 3.55
1899 1919 0.179037 ATGGCGATGGATGGACACTG 60.179 55.000 0.00 0.00 0.00 3.66
1900 1920 1.524621 GGCGATGGATGGACACTGG 60.525 63.158 0.00 0.00 0.00 4.00
1901 1921 1.221840 GCGATGGATGGACACTGGT 59.778 57.895 0.00 0.00 0.00 4.00
1902 1922 0.811616 GCGATGGATGGACACTGGTC 60.812 60.000 0.00 0.00 43.55 4.02
1910 1930 3.456317 GACACTGGTCCTGTCCGT 58.544 61.111 0.00 0.00 38.12 4.69
1911 1931 1.006102 GACACTGGTCCTGTCCGTG 60.006 63.158 0.00 0.00 38.12 4.94
1912 1932 2.357517 CACTGGTCCTGTCCGTGC 60.358 66.667 0.00 0.00 0.00 5.34
1913 1933 3.991051 ACTGGTCCTGTCCGTGCG 61.991 66.667 0.00 0.00 0.00 5.34
1962 1982 3.646715 CCGGTGGCCCTCCTTCAA 61.647 66.667 0.00 0.00 0.00 2.69
1963 1983 2.677228 CGGTGGCCCTCCTTCAAT 59.323 61.111 0.00 0.00 0.00 2.57
1964 1984 1.750399 CGGTGGCCCTCCTTCAATG 60.750 63.158 0.00 0.00 0.00 2.82
1965 1985 2.054453 GGTGGCCCTCCTTCAATGC 61.054 63.158 0.00 0.00 0.00 3.56
1966 1986 2.045045 TGGCCCTCCTTCAATGCG 60.045 61.111 0.00 0.00 0.00 4.73
1967 1987 2.830370 GGCCCTCCTTCAATGCGG 60.830 66.667 0.00 0.00 0.00 5.69
1968 1988 2.272146 GCCCTCCTTCAATGCGGA 59.728 61.111 0.00 0.00 0.00 5.54
1969 1989 1.152881 GCCCTCCTTCAATGCGGAT 60.153 57.895 0.00 0.00 0.00 4.18
1970 1990 1.450531 GCCCTCCTTCAATGCGGATG 61.451 60.000 0.00 0.00 0.00 3.51
1971 1991 1.450531 CCCTCCTTCAATGCGGATGC 61.451 60.000 0.00 0.00 43.20 3.91
1972 1992 1.450531 CCTCCTTCAATGCGGATGCC 61.451 60.000 0.00 0.00 41.78 4.40
1990 2010 3.424859 GGCCGCGACGCCTTTTTA 61.425 61.111 17.81 0.00 46.10 1.52
1991 2011 2.557298 GCCGCGACGCCTTTTTAA 59.443 55.556 15.34 0.00 0.00 1.52
1992 2012 1.511254 GCCGCGACGCCTTTTTAAG 60.511 57.895 15.34 0.00 0.00 1.85
2003 2023 2.092323 CCTTTTTAAGGCTCTTCCGGG 58.908 52.381 0.00 0.00 42.78 5.73
2004 2024 2.092323 CTTTTTAAGGCTCTTCCGGGG 58.908 52.381 0.00 0.00 40.77 5.73
2005 2025 0.330267 TTTTAAGGCTCTTCCGGGGG 59.670 55.000 0.00 0.00 40.77 5.40
2006 2026 2.206182 TTTAAGGCTCTTCCGGGGGC 62.206 60.000 0.00 0.00 40.77 5.80
2007 2027 3.635869 TAAGGCTCTTCCGGGGGCT 62.636 63.158 0.00 4.71 40.77 5.19
2010 2030 4.168291 GCTCTTCCGGGGGCTCTG 62.168 72.222 0.00 0.00 0.00 3.35
2011 2031 2.364317 CTCTTCCGGGGGCTCTGA 60.364 66.667 0.00 0.00 0.00 3.27
2012 2032 1.764054 CTCTTCCGGGGGCTCTGAT 60.764 63.158 0.00 0.00 0.00 2.90
2013 2033 1.306997 TCTTCCGGGGGCTCTGATT 60.307 57.895 0.00 0.00 0.00 2.57
2014 2034 1.147153 CTTCCGGGGGCTCTGATTC 59.853 63.158 0.00 0.00 0.00 2.52
2015 2035 2.330924 CTTCCGGGGGCTCTGATTCC 62.331 65.000 0.00 0.00 0.00 3.01
2016 2036 4.241555 CCGGGGGCTCTGATTCCG 62.242 72.222 0.00 0.00 40.32 4.30
2017 2037 4.241555 CGGGGGCTCTGATTCCGG 62.242 72.222 0.00 0.00 37.35 5.14
2018 2038 3.090532 GGGGGCTCTGATTCCGGT 61.091 66.667 0.00 0.00 0.00 5.28
2019 2039 2.190578 GGGGCTCTGATTCCGGTG 59.809 66.667 0.00 0.00 0.00 4.94
2020 2040 2.514824 GGGCTCTGATTCCGGTGC 60.515 66.667 0.00 0.00 37.42 5.01
2021 2041 2.514824 GGCTCTGATTCCGGTGCC 60.515 66.667 0.00 0.00 46.95 5.01
2022 2042 2.586792 GCTCTGATTCCGGTGCCT 59.413 61.111 0.00 0.00 33.34 4.75
2023 2043 1.522580 GCTCTGATTCCGGTGCCTC 60.523 63.158 0.00 0.00 33.34 4.70
2024 2044 1.900351 CTCTGATTCCGGTGCCTCA 59.100 57.895 0.00 0.00 0.00 3.86
2025 2045 0.179089 CTCTGATTCCGGTGCCTCAG 60.179 60.000 0.00 9.87 37.14 3.35
2026 2046 1.817099 CTGATTCCGGTGCCTCAGC 60.817 63.158 0.00 0.00 40.48 4.26
2027 2047 2.514824 GATTCCGGTGCCTCAGCC 60.515 66.667 0.00 0.00 38.69 4.85
2028 2048 4.115199 ATTCCGGTGCCTCAGCCC 62.115 66.667 0.00 0.00 38.69 5.19
2032 2052 4.659172 CGGTGCCTCAGCCCCAAA 62.659 66.667 0.00 0.00 36.06 3.28
2033 2053 2.991540 GGTGCCTCAGCCCCAAAC 60.992 66.667 0.00 0.00 36.37 2.93
2034 2054 2.203480 GTGCCTCAGCCCCAAACA 60.203 61.111 0.00 0.00 38.69 2.83
2035 2055 2.203480 TGCCTCAGCCCCAAACAC 60.203 61.111 0.00 0.00 38.69 3.32
2036 2056 2.991540 GCCTCAGCCCCAAACACC 60.992 66.667 0.00 0.00 0.00 4.16
2037 2057 2.672996 CCTCAGCCCCAAACACCG 60.673 66.667 0.00 0.00 0.00 4.94
2038 2058 3.365265 CTCAGCCCCAAACACCGC 61.365 66.667 0.00 0.00 0.00 5.68
2039 2059 4.966787 TCAGCCCCAAACACCGCC 62.967 66.667 0.00 0.00 0.00 6.13
2045 2065 4.326766 CCAAACACCGCCGTGCAG 62.327 66.667 5.02 0.00 44.40 4.41
2046 2066 3.276091 CAAACACCGCCGTGCAGA 61.276 61.111 5.02 0.00 44.40 4.26
2047 2067 3.276846 AAACACCGCCGTGCAGAC 61.277 61.111 5.02 0.00 44.40 3.51
2048 2068 3.750373 AAACACCGCCGTGCAGACT 62.750 57.895 5.02 0.00 44.40 3.24
2049 2069 4.969196 ACACCGCCGTGCAGACTG 62.969 66.667 5.02 0.00 44.40 3.51
2060 2080 3.849002 GCAGACTGCAGAGATCCAA 57.151 52.632 23.35 0.00 44.26 3.53
2061 2081 2.328819 GCAGACTGCAGAGATCCAAT 57.671 50.000 23.35 0.00 44.26 3.16
2062 2082 2.211806 GCAGACTGCAGAGATCCAATC 58.788 52.381 23.35 4.48 44.26 2.67
2063 2083 2.836262 CAGACTGCAGAGATCCAATCC 58.164 52.381 23.35 0.00 0.00 3.01
2064 2084 2.169978 CAGACTGCAGAGATCCAATCCA 59.830 50.000 23.35 0.00 0.00 3.41
2065 2085 2.170187 AGACTGCAGAGATCCAATCCAC 59.830 50.000 23.35 0.00 0.00 4.02
2066 2086 2.170187 GACTGCAGAGATCCAATCCACT 59.830 50.000 23.35 0.00 0.00 4.00
2067 2087 3.378512 ACTGCAGAGATCCAATCCACTA 58.621 45.455 23.35 0.00 0.00 2.74
2068 2088 3.133721 ACTGCAGAGATCCAATCCACTAC 59.866 47.826 23.35 0.00 0.00 2.73
2069 2089 3.106827 TGCAGAGATCCAATCCACTACA 58.893 45.455 0.00 0.00 0.00 2.74
2070 2090 3.713248 TGCAGAGATCCAATCCACTACAT 59.287 43.478 0.00 0.00 0.00 2.29
2071 2091 4.901250 TGCAGAGATCCAATCCACTACATA 59.099 41.667 0.00 0.00 0.00 2.29
2072 2092 5.011431 TGCAGAGATCCAATCCACTACATAG 59.989 44.000 0.00 0.00 0.00 2.23
2073 2093 5.244851 GCAGAGATCCAATCCACTACATAGA 59.755 44.000 0.00 0.00 0.00 1.98
2074 2094 6.572119 GCAGAGATCCAATCCACTACATAGAG 60.572 46.154 0.00 0.00 0.00 2.43
2075 2095 6.493115 CAGAGATCCAATCCACTACATAGAGT 59.507 42.308 0.00 0.00 0.00 3.24
2076 2096 6.493115 AGAGATCCAATCCACTACATAGAGTG 59.507 42.308 0.00 0.00 45.43 3.51
2077 2097 4.672587 TCCAATCCACTACATAGAGTGC 57.327 45.455 0.00 0.00 44.65 4.40
2078 2098 4.030216 TCCAATCCACTACATAGAGTGCA 58.970 43.478 0.00 0.00 44.65 4.57
2079 2099 4.469586 TCCAATCCACTACATAGAGTGCAA 59.530 41.667 0.00 0.00 44.65 4.08
2080 2100 4.813161 CCAATCCACTACATAGAGTGCAAG 59.187 45.833 0.00 0.00 44.65 4.01
2081 2101 3.526931 TCCACTACATAGAGTGCAAGC 57.473 47.619 0.00 0.00 44.65 4.01
2082 2102 3.099905 TCCACTACATAGAGTGCAAGCT 58.900 45.455 0.00 0.00 44.65 3.74
2083 2103 4.278310 TCCACTACATAGAGTGCAAGCTA 58.722 43.478 0.00 0.00 44.65 3.32
2084 2104 4.895889 TCCACTACATAGAGTGCAAGCTAT 59.104 41.667 4.25 4.25 44.65 2.97
2085 2105 5.010112 TCCACTACATAGAGTGCAAGCTATC 59.990 44.000 6.61 0.00 44.65 2.08
2086 2106 5.010516 CCACTACATAGAGTGCAAGCTATCT 59.989 44.000 6.61 5.26 44.65 1.98
2087 2107 5.919707 CACTACATAGAGTGCAAGCTATCTG 59.080 44.000 6.61 2.61 40.42 2.90
2088 2108 4.333913 ACATAGAGTGCAAGCTATCTGG 57.666 45.455 6.61 0.87 0.00 3.86
2089 2109 2.898729 TAGAGTGCAAGCTATCTGGC 57.101 50.000 9.02 0.00 39.77 4.85
2090 2110 0.179936 AGAGTGCAAGCTATCTGGCC 59.820 55.000 0.00 0.00 38.53 5.36
2091 2111 0.107508 GAGTGCAAGCTATCTGGCCA 60.108 55.000 4.71 4.71 38.53 5.36
2092 2112 0.393537 AGTGCAAGCTATCTGGCCAC 60.394 55.000 0.00 0.00 38.53 5.01
2093 2113 0.677731 GTGCAAGCTATCTGGCCACA 60.678 55.000 0.00 0.00 38.53 4.17
2094 2114 0.256752 TGCAAGCTATCTGGCCACAT 59.743 50.000 0.00 0.00 38.53 3.21
2095 2115 1.341285 TGCAAGCTATCTGGCCACATT 60.341 47.619 0.00 0.00 38.53 2.71
2096 2116 1.066605 GCAAGCTATCTGGCCACATTG 59.933 52.381 0.00 0.00 32.98 2.82
2097 2117 1.066605 CAAGCTATCTGGCCACATTGC 59.933 52.381 17.31 17.31 0.00 3.56
2098 2118 0.549950 AGCTATCTGGCCACATTGCT 59.450 50.000 20.87 20.87 0.00 3.91
2099 2119 1.770658 AGCTATCTGGCCACATTGCTA 59.229 47.619 24.06 1.11 0.00 3.49
2100 2120 2.149578 GCTATCTGGCCACATTGCTAG 58.850 52.381 17.64 7.92 40.83 3.42
2103 2123 1.571955 TCTGGCCACATTGCTAGAGA 58.428 50.000 0.00 0.00 42.97 3.10
2104 2124 2.121948 TCTGGCCACATTGCTAGAGAT 58.878 47.619 0.00 0.00 42.97 2.75
2105 2125 2.507058 TCTGGCCACATTGCTAGAGATT 59.493 45.455 0.00 0.00 42.97 2.40
2106 2126 2.617308 CTGGCCACATTGCTAGAGATTG 59.383 50.000 0.00 0.00 41.92 2.67
2107 2127 1.336125 GGCCACATTGCTAGAGATTGC 59.664 52.381 0.00 0.00 0.00 3.56
2108 2128 1.336125 GCCACATTGCTAGAGATTGCC 59.664 52.381 0.00 0.00 0.00 4.52
2109 2129 1.952296 CCACATTGCTAGAGATTGCCC 59.048 52.381 0.00 0.00 0.00 5.36
2110 2130 2.422519 CCACATTGCTAGAGATTGCCCT 60.423 50.000 0.00 0.00 0.00 5.19
2111 2131 2.877168 CACATTGCTAGAGATTGCCCTC 59.123 50.000 0.00 0.00 0.00 4.30
2112 2132 2.507058 ACATTGCTAGAGATTGCCCTCA 59.493 45.455 0.00 0.00 35.68 3.86
2113 2133 3.054139 ACATTGCTAGAGATTGCCCTCAA 60.054 43.478 0.00 0.00 35.68 3.02
2114 2134 2.996249 TGCTAGAGATTGCCCTCAAG 57.004 50.000 0.00 0.00 35.37 3.02
2115 2135 1.134280 TGCTAGAGATTGCCCTCAAGC 60.134 52.381 0.00 0.00 38.79 4.01
2119 2139 3.877951 AGATTGCCCTCAAGCTCAG 57.122 52.632 0.00 0.00 44.85 3.35
2120 2140 0.394080 AGATTGCCCTCAAGCTCAGC 60.394 55.000 0.00 0.00 44.85 4.26
2121 2141 1.712977 GATTGCCCTCAAGCTCAGCG 61.713 60.000 0.00 0.00 35.82 5.18
2122 2142 2.475371 ATTGCCCTCAAGCTCAGCGT 62.475 55.000 0.00 0.00 35.37 5.07
2123 2143 3.123620 GCCCTCAAGCTCAGCGTG 61.124 66.667 6.19 6.19 39.24 5.34
2124 2144 2.435586 CCCTCAAGCTCAGCGTGG 60.436 66.667 13.00 3.60 38.48 4.94
2125 2145 3.123620 CCTCAAGCTCAGCGTGGC 61.124 66.667 13.00 0.00 38.48 5.01
2126 2146 3.123620 CTCAAGCTCAGCGTGGCC 61.124 66.667 13.00 0.00 38.48 5.36
2161 2181 4.790962 CCTGCTGCTGGGCGTGAT 62.791 66.667 16.96 0.00 34.52 3.06
2162 2182 3.200593 CTGCTGCTGGGCGTGATC 61.201 66.667 0.00 0.00 34.52 2.92
2163 2183 4.783621 TGCTGCTGGGCGTGATCC 62.784 66.667 0.00 0.00 34.52 3.36
2164 2184 4.479993 GCTGCTGGGCGTGATCCT 62.480 66.667 0.00 0.00 0.00 3.24
2165 2185 2.513204 CTGCTGGGCGTGATCCTG 60.513 66.667 0.00 0.00 0.00 3.86
2166 2186 3.320879 CTGCTGGGCGTGATCCTGT 62.321 63.158 0.00 0.00 0.00 4.00
2167 2187 2.045926 GCTGGGCGTGATCCTGTT 60.046 61.111 0.00 0.00 0.00 3.16
2168 2188 2.109126 GCTGGGCGTGATCCTGTTC 61.109 63.158 0.00 0.00 0.00 3.18
2169 2189 1.811266 CTGGGCGTGATCCTGTTCG 60.811 63.158 0.00 0.00 0.00 3.95
2170 2190 2.225791 CTGGGCGTGATCCTGTTCGA 62.226 60.000 0.00 0.00 0.00 3.71
2171 2191 1.519455 GGGCGTGATCCTGTTCGAG 60.519 63.158 0.00 0.00 0.00 4.04
2172 2192 1.511305 GGCGTGATCCTGTTCGAGA 59.489 57.895 0.00 0.00 0.00 4.04
2173 2193 0.802607 GGCGTGATCCTGTTCGAGAC 60.803 60.000 0.00 0.00 0.00 3.36
2174 2194 0.802607 GCGTGATCCTGTTCGAGACC 60.803 60.000 0.00 0.00 0.00 3.85
2175 2195 0.523546 CGTGATCCTGTTCGAGACCG 60.524 60.000 0.00 0.00 37.07 4.79
2176 2196 0.526662 GTGATCCTGTTCGAGACCGT 59.473 55.000 0.00 0.00 37.05 4.83
2177 2197 0.809385 TGATCCTGTTCGAGACCGTC 59.191 55.000 0.00 0.00 37.05 4.79
2178 2198 1.096416 GATCCTGTTCGAGACCGTCT 58.904 55.000 0.00 0.00 37.05 4.18
2179 2199 1.473278 GATCCTGTTCGAGACCGTCTT 59.527 52.381 1.71 0.00 37.05 3.01
2180 2200 0.879765 TCCTGTTCGAGACCGTCTTC 59.120 55.000 1.71 0.00 37.05 2.87
2181 2201 0.454620 CCTGTTCGAGACCGTCTTCG 60.455 60.000 1.71 8.07 37.05 3.79
2182 2202 1.066114 CTGTTCGAGACCGTCTTCGC 61.066 60.000 1.71 0.00 37.05 4.70
2183 2203 1.209640 GTTCGAGACCGTCTTCGCT 59.790 57.895 1.71 0.00 37.05 4.93
2184 2204 0.386985 GTTCGAGACCGTCTTCGCTT 60.387 55.000 1.71 0.00 37.05 4.68
2185 2205 0.109873 TTCGAGACCGTCTTCGCTTC 60.110 55.000 1.71 0.00 37.05 3.86
2186 2206 1.514443 CGAGACCGTCTTCGCTTCC 60.514 63.158 1.71 0.00 35.54 3.46
2187 2207 1.153804 GAGACCGTCTTCGCTTCCC 60.154 63.158 1.71 0.00 35.54 3.97
2188 2208 2.125633 GACCGTCTTCGCTTCCCC 60.126 66.667 0.00 0.00 35.54 4.81
2189 2209 2.920912 ACCGTCTTCGCTTCCCCA 60.921 61.111 0.00 0.00 35.54 4.96
2190 2210 2.434359 CCGTCTTCGCTTCCCCAC 60.434 66.667 0.00 0.00 35.54 4.61
2191 2211 2.809601 CGTCTTCGCTTCCCCACG 60.810 66.667 0.00 0.00 0.00 4.94
2192 2212 3.119096 GTCTTCGCTTCCCCACGC 61.119 66.667 0.00 0.00 0.00 5.34
2193 2213 4.388499 TCTTCGCTTCCCCACGCC 62.388 66.667 0.00 0.00 0.00 5.68
2194 2214 4.394712 CTTCGCTTCCCCACGCCT 62.395 66.667 0.00 0.00 0.00 5.52
2195 2215 4.388499 TTCGCTTCCCCACGCCTC 62.388 66.667 0.00 0.00 0.00 4.70
2198 2218 4.035102 GCTTCCCCACGCCTCCTT 62.035 66.667 0.00 0.00 0.00 3.36
2199 2219 2.269241 CTTCCCCACGCCTCCTTC 59.731 66.667 0.00 0.00 0.00 3.46
2200 2220 3.665675 CTTCCCCACGCCTCCTTCG 62.666 68.421 0.00 0.00 0.00 3.79
2208 2228 4.400961 GCCTCCTTCGCCTGCACT 62.401 66.667 0.00 0.00 0.00 4.40
2209 2229 2.435586 CCTCCTTCGCCTGCACTG 60.436 66.667 0.00 0.00 0.00 3.66
2210 2230 2.435586 CTCCTTCGCCTGCACTGG 60.436 66.667 0.00 0.00 0.00 4.00
2217 2237 4.746309 GCCTGCACTGGCCATGGA 62.746 66.667 18.40 7.57 46.82 3.41
2218 2238 2.753043 CCTGCACTGGCCATGGAC 60.753 66.667 18.40 15.32 40.13 4.02
2219 2239 2.034532 CTGCACTGGCCATGGACA 59.965 61.111 22.03 22.03 40.13 4.02
2220 2240 2.282391 TGCACTGGCCATGGACAC 60.282 61.111 19.12 8.16 40.13 3.67
2221 2241 2.034687 GCACTGGCCATGGACACT 59.965 61.111 19.12 4.68 0.00 3.55
2222 2242 2.338015 GCACTGGCCATGGACACTG 61.338 63.158 19.12 19.62 0.00 3.66
2223 2243 2.034687 ACTGGCCATGGACACTGC 59.965 61.111 19.12 0.00 0.00 4.40
2224 2244 2.753043 CTGGCCATGGACACTGCC 60.753 66.667 19.12 9.02 44.27 4.85
2226 2246 3.064324 GGCCATGGACACTGCCAC 61.064 66.667 18.40 0.00 43.46 5.01
2227 2247 3.064324 GCCATGGACACTGCCACC 61.064 66.667 18.40 0.00 41.56 4.61
2228 2248 2.435663 CCATGGACACTGCCACCA 59.564 61.111 5.56 0.00 41.56 4.17
2229 2249 1.973281 CCATGGACACTGCCACCAC 60.973 63.158 5.56 0.00 41.56 4.16
2230 2250 1.228215 CATGGACACTGCCACCACA 60.228 57.895 0.00 0.00 41.56 4.17
2231 2251 1.228245 ATGGACACTGCCACCACAC 60.228 57.895 0.00 0.00 41.56 3.82
2232 2252 2.594592 GGACACTGCCACCACACC 60.595 66.667 0.00 0.00 0.00 4.16
2233 2253 2.972505 GACACTGCCACCACACCG 60.973 66.667 0.00 0.00 0.00 4.94
2234 2254 3.454587 GACACTGCCACCACACCGA 62.455 63.158 0.00 0.00 0.00 4.69
2235 2255 2.972505 CACTGCCACCACACCGAC 60.973 66.667 0.00 0.00 0.00 4.79
2236 2256 4.250305 ACTGCCACCACACCGACC 62.250 66.667 0.00 0.00 0.00 4.79
2239 2259 4.344865 GCCACCACACCGACCCAT 62.345 66.667 0.00 0.00 0.00 4.00
2240 2260 2.046314 CCACCACACCGACCCATC 60.046 66.667 0.00 0.00 0.00 3.51
2264 2284 4.704833 GCCGAGGAGCAGCCACAA 62.705 66.667 0.00 0.00 40.02 3.33
2265 2285 2.435586 CCGAGGAGCAGCCACAAG 60.436 66.667 0.00 0.00 40.02 3.16
2266 2286 2.435586 CGAGGAGCAGCCACAAGG 60.436 66.667 0.00 0.00 40.02 3.61
2267 2287 2.753029 GAGGAGCAGCCACAAGGT 59.247 61.111 0.00 0.00 40.02 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 6.826231 TGTTGGAAGTGAATAGTTTTGAGACA 59.174 34.615 0.00 0.00 0.00 3.41
159 160 4.778213 ATAGCTTTTAGCACCTCCATGA 57.222 40.909 0.00 0.00 45.56 3.07
195 196 1.455587 CCCGCCCAAAGGTATGCAT 60.456 57.895 3.79 3.79 34.57 3.96
307 308 1.763968 GGAGGGCCTTAGCGAATTTT 58.236 50.000 7.89 0.00 41.24 1.82
934 943 2.624029 GGCATTGGAAAAGGAGATGGGA 60.624 50.000 0.00 0.00 0.00 4.37
1077 1086 1.448119 GCGCTTTAGGGGATCCAAGC 61.448 60.000 19.74 19.74 38.18 4.01
1292 1310 0.031994 ACAAATGCCACAAAGCGGTC 59.968 50.000 0.00 0.00 34.65 4.79
1293 1311 0.463620 AACAAATGCCACAAAGCGGT 59.536 45.000 0.00 0.00 34.65 5.68
1372 1392 9.391006 ACAAACAGACTTACTTTTACATCTTCA 57.609 29.630 0.00 0.00 0.00 3.02
1373 1393 9.651718 CACAAACAGACTTACTTTTACATCTTC 57.348 33.333 0.00 0.00 0.00 2.87
1374 1394 9.174166 ACACAAACAGACTTACTTTTACATCTT 57.826 29.630 0.00 0.00 0.00 2.40
1375 1395 8.612619 CACACAAACAGACTTACTTTTACATCT 58.387 33.333 0.00 0.00 0.00 2.90
1376 1396 8.395633 ACACACAAACAGACTTACTTTTACATC 58.604 33.333 0.00 0.00 0.00 3.06
1377 1397 8.276252 ACACACAAACAGACTTACTTTTACAT 57.724 30.769 0.00 0.00 0.00 2.29
1378 1398 7.675962 ACACACAAACAGACTTACTTTTACA 57.324 32.000 0.00 0.00 0.00 2.41
1379 1399 9.698617 CTAACACACAAACAGACTTACTTTTAC 57.301 33.333 0.00 0.00 0.00 2.01
1380 1400 9.656040 TCTAACACACAAACAGACTTACTTTTA 57.344 29.630 0.00 0.00 0.00 1.52
1381 1401 8.556213 TCTAACACACAAACAGACTTACTTTT 57.444 30.769 0.00 0.00 0.00 2.27
1382 1402 7.280205 CCTCTAACACACAAACAGACTTACTTT 59.720 37.037 0.00 0.00 0.00 2.66
1383 1403 6.761714 CCTCTAACACACAAACAGACTTACTT 59.238 38.462 0.00 0.00 0.00 2.24
1384 1404 6.281405 CCTCTAACACACAAACAGACTTACT 58.719 40.000 0.00 0.00 0.00 2.24
1385 1405 5.050295 GCCTCTAACACACAAACAGACTTAC 60.050 44.000 0.00 0.00 0.00 2.34
1386 1406 5.054477 GCCTCTAACACACAAACAGACTTA 58.946 41.667 0.00 0.00 0.00 2.24
1387 1407 3.877508 GCCTCTAACACACAAACAGACTT 59.122 43.478 0.00 0.00 0.00 3.01
1388 1408 3.467803 GCCTCTAACACACAAACAGACT 58.532 45.455 0.00 0.00 0.00 3.24
1389 1409 2.221055 CGCCTCTAACACACAAACAGAC 59.779 50.000 0.00 0.00 0.00 3.51
1390 1410 2.159014 ACGCCTCTAACACACAAACAGA 60.159 45.455 0.00 0.00 0.00 3.41
1391 1411 2.032894 CACGCCTCTAACACACAAACAG 60.033 50.000 0.00 0.00 0.00 3.16
1392 1412 1.937223 CACGCCTCTAACACACAAACA 59.063 47.619 0.00 0.00 0.00 2.83
1393 1413 1.333791 GCACGCCTCTAACACACAAAC 60.334 52.381 0.00 0.00 0.00 2.93
1394 1414 0.941542 GCACGCCTCTAACACACAAA 59.058 50.000 0.00 0.00 0.00 2.83
1395 1415 0.179070 TGCACGCCTCTAACACACAA 60.179 50.000 0.00 0.00 0.00 3.33
1396 1416 0.878523 GTGCACGCCTCTAACACACA 60.879 55.000 0.00 0.00 0.00 3.72
1397 1417 0.878523 TGTGCACGCCTCTAACACAC 60.879 55.000 13.13 0.00 36.39 3.82
1398 1418 0.034756 ATGTGCACGCCTCTAACACA 59.965 50.000 13.13 0.00 44.56 3.72
1399 1419 1.135972 CAATGTGCACGCCTCTAACAC 60.136 52.381 13.13 0.00 0.00 3.32
1400 1420 1.155889 CAATGTGCACGCCTCTAACA 58.844 50.000 13.13 0.00 0.00 2.41
1401 1421 0.447801 CCAATGTGCACGCCTCTAAC 59.552 55.000 13.13 0.00 0.00 2.34
1402 1422 1.305219 GCCAATGTGCACGCCTCTAA 61.305 55.000 13.13 0.00 0.00 2.10
1403 1423 1.745115 GCCAATGTGCACGCCTCTA 60.745 57.895 13.13 0.00 0.00 2.43
1404 1424 3.058160 GCCAATGTGCACGCCTCT 61.058 61.111 13.13 0.00 0.00 3.69
1405 1425 3.364441 TGCCAATGTGCACGCCTC 61.364 61.111 13.13 0.71 36.04 4.70
1411 1431 4.024143 GCGTCGTGCCAATGTGCA 62.024 61.111 0.00 0.00 39.37 4.57
1433 1453 4.854924 TGATCCGCACATGCCCCG 62.855 66.667 0.00 0.00 37.91 5.73
1434 1454 2.203394 ATGATCCGCACATGCCCC 60.203 61.111 0.00 0.00 37.91 5.80
1435 1455 1.512996 CTCATGATCCGCACATGCCC 61.513 60.000 0.00 0.00 43.03 5.36
1436 1456 1.512996 CCTCATGATCCGCACATGCC 61.513 60.000 0.00 0.00 43.03 4.40
1437 1457 1.947013 CCTCATGATCCGCACATGC 59.053 57.895 0.00 0.00 43.03 4.06
1438 1458 1.512996 GGCCTCATGATCCGCACATG 61.513 60.000 0.00 0.00 44.20 3.21
1439 1459 1.228063 GGCCTCATGATCCGCACAT 60.228 57.895 0.00 0.00 0.00 3.21
1440 1460 2.190313 GGCCTCATGATCCGCACA 59.810 61.111 0.00 0.00 0.00 4.57
1441 1461 2.969238 CGGCCTCATGATCCGCAC 60.969 66.667 19.31 6.03 36.53 5.34
1442 1462 4.240103 CCGGCCTCATGATCCGCA 62.240 66.667 23.50 0.00 41.68 5.69
1443 1463 3.873026 CTCCGGCCTCATGATCCGC 62.873 68.421 23.50 13.78 41.68 5.54
1444 1464 2.341543 CTCCGGCCTCATGATCCG 59.658 66.667 22.50 22.50 42.58 4.18
1445 1465 1.369321 GACTCCGGCCTCATGATCC 59.631 63.158 0.00 0.00 0.00 3.36
1446 1466 0.683973 ATGACTCCGGCCTCATGATC 59.316 55.000 11.70 0.00 0.00 2.92
1447 1467 0.395686 CATGACTCCGGCCTCATGAT 59.604 55.000 25.84 2.23 44.51 2.45
1448 1468 1.825341 CATGACTCCGGCCTCATGA 59.175 57.895 25.84 0.00 44.51 3.07
1449 1469 1.890979 GCATGACTCCGGCCTCATG 60.891 63.158 25.74 25.74 44.53 3.07
1450 1470 2.507944 GCATGACTCCGGCCTCAT 59.492 61.111 0.00 1.70 0.00 2.90
1451 1471 4.147449 CGCATGACTCCGGCCTCA 62.147 66.667 0.00 0.00 0.00 3.86
1452 1472 3.838271 TCGCATGACTCCGGCCTC 61.838 66.667 0.00 0.00 0.00 4.70
1453 1473 4.148825 GTCGCATGACTCCGGCCT 62.149 66.667 0.00 0.00 42.08 5.19
1454 1474 4.451150 TGTCGCATGACTCCGGCC 62.451 66.667 0.00 0.00 45.70 6.13
1455 1475 3.188786 GTGTCGCATGACTCCGGC 61.189 66.667 0.00 0.00 45.70 6.13
1456 1476 2.880879 CGTGTCGCATGACTCCGG 60.881 66.667 0.00 0.00 45.70 5.14
1457 1477 1.869574 CTCGTGTCGCATGACTCCG 60.870 63.158 0.00 0.00 45.70 4.63
1458 1478 2.161486 GCTCGTGTCGCATGACTCC 61.161 63.158 0.00 0.00 45.70 3.85
1459 1479 2.161486 GGCTCGTGTCGCATGACTC 61.161 63.158 0.00 0.00 45.70 3.36
1460 1480 2.125912 GGCTCGTGTCGCATGACT 60.126 61.111 0.00 0.00 45.70 3.41
1461 1481 3.188786 GGGCTCGTGTCGCATGAC 61.189 66.667 0.00 0.00 45.71 3.06
1462 1482 4.794439 CGGGCTCGTGTCGCATGA 62.794 66.667 0.00 2.54 0.00 3.07
1463 1483 4.794439 TCGGGCTCGTGTCGCATG 62.794 66.667 5.57 0.00 37.69 4.06
1464 1484 4.498520 CTCGGGCTCGTGTCGCAT 62.499 66.667 5.57 0.00 37.69 4.73
1467 1487 4.477975 GTCCTCGGGCTCGTGTCG 62.478 72.222 5.57 0.00 37.69 4.35
1468 1488 4.131088 GGTCCTCGGGCTCGTGTC 62.131 72.222 5.57 0.00 37.69 3.67
1469 1489 4.680537 AGGTCCTCGGGCTCGTGT 62.681 66.667 5.57 0.00 37.69 4.49
1470 1490 4.135153 CAGGTCCTCGGGCTCGTG 62.135 72.222 5.57 2.51 37.69 4.35
1471 1491 4.361971 TCAGGTCCTCGGGCTCGT 62.362 66.667 5.57 0.00 37.69 4.18
1472 1492 3.522731 CTCAGGTCCTCGGGCTCG 61.523 72.222 0.00 0.00 37.82 5.03
1473 1493 2.043852 TCTCAGGTCCTCGGGCTC 60.044 66.667 0.00 0.00 0.00 4.70
1474 1494 2.043450 CTCTCAGGTCCTCGGGCT 60.043 66.667 0.00 0.00 0.00 5.19
1475 1495 3.151022 CCTCTCAGGTCCTCGGGC 61.151 72.222 0.00 0.00 0.00 6.13
1476 1496 2.443016 CCCTCTCAGGTCCTCGGG 60.443 72.222 0.00 0.00 31.93 5.14
1477 1497 1.000486 TTCCCTCTCAGGTCCTCGG 60.000 63.158 0.00 0.00 31.93 4.63
1478 1498 1.324005 GGTTCCCTCTCAGGTCCTCG 61.324 65.000 0.00 0.00 31.93 4.63
1479 1499 0.252284 TGGTTCCCTCTCAGGTCCTC 60.252 60.000 0.00 0.00 31.93 3.71
1480 1500 0.545548 GTGGTTCCCTCTCAGGTCCT 60.546 60.000 0.00 0.00 31.93 3.85
1481 1501 1.554583 GGTGGTTCCCTCTCAGGTCC 61.555 65.000 0.00 0.00 31.93 4.46
1482 1502 1.984020 GGTGGTTCCCTCTCAGGTC 59.016 63.158 0.00 0.00 31.93 3.85
1483 1503 4.234673 GGTGGTTCCCTCTCAGGT 57.765 61.111 0.00 0.00 31.93 4.00
1492 1512 1.996187 GGGAGAGGAGGGTGGTTCC 60.996 68.421 0.00 0.00 34.83 3.62
1493 1513 1.996187 GGGGAGAGGAGGGTGGTTC 60.996 68.421 0.00 0.00 0.00 3.62
1494 1514 2.125225 GGGGAGAGGAGGGTGGTT 59.875 66.667 0.00 0.00 0.00 3.67
1495 1515 4.400251 CGGGGAGAGGAGGGTGGT 62.400 72.222 0.00 0.00 0.00 4.16
1501 1521 3.068691 TTGACGCGGGGAGAGGAG 61.069 66.667 12.47 0.00 0.00 3.69
1502 1522 3.379445 GTTGACGCGGGGAGAGGA 61.379 66.667 12.47 0.00 0.00 3.71
1503 1523 4.796231 CGTTGACGCGGGGAGAGG 62.796 72.222 12.47 0.00 0.00 3.69
1504 1524 3.744719 TCGTTGACGCGGGGAGAG 61.745 66.667 12.47 0.00 39.60 3.20
1505 1525 4.047059 GTCGTTGACGCGGGGAGA 62.047 66.667 12.47 0.00 39.60 3.71
1509 1529 4.953868 TGTGGTCGTTGACGCGGG 62.954 66.667 12.47 0.00 39.60 6.13
1510 1530 2.726691 GATGTGGTCGTTGACGCGG 61.727 63.158 12.47 0.00 39.60 6.46
1511 1531 2.726691 GGATGTGGTCGTTGACGCG 61.727 63.158 3.53 3.53 39.60 6.01
1512 1532 2.388232 GGGATGTGGTCGTTGACGC 61.388 63.158 0.00 0.00 39.60 5.19
1513 1533 1.740296 GGGGATGTGGTCGTTGACG 60.740 63.158 0.00 0.00 41.45 4.35
1514 1534 0.391263 GAGGGGATGTGGTCGTTGAC 60.391 60.000 0.00 0.00 0.00 3.18
1515 1535 1.884075 CGAGGGGATGTGGTCGTTGA 61.884 60.000 0.00 0.00 0.00 3.18
1516 1536 1.447838 CGAGGGGATGTGGTCGTTG 60.448 63.158 0.00 0.00 0.00 4.10
1517 1537 2.656069 CCGAGGGGATGTGGTCGTT 61.656 63.158 0.00 0.00 34.06 3.85
1518 1538 3.075005 CCGAGGGGATGTGGTCGT 61.075 66.667 0.00 0.00 34.06 4.34
1519 1539 4.530857 GCCGAGGGGATGTGGTCG 62.531 72.222 0.00 0.00 34.06 4.79
1520 1540 4.176752 GGCCGAGGGGATGTGGTC 62.177 72.222 0.00 0.00 34.06 4.02
1522 1542 4.181010 CTGGCCGAGGGGATGTGG 62.181 72.222 0.00 0.00 34.06 4.17
1523 1543 4.864334 GCTGGCCGAGGGGATGTG 62.864 72.222 0.00 0.00 34.06 3.21
1544 1564 3.017581 ATGGGACTGGAGGGTGGC 61.018 66.667 0.00 0.00 0.00 5.01
1545 1565 2.683465 CCATGGGACTGGAGGGTGG 61.683 68.421 2.85 0.00 38.69 4.61
1546 1566 2.683465 CCCATGGGACTGGAGGGTG 61.683 68.421 28.27 0.00 38.69 4.61
1547 1567 2.286425 CCCATGGGACTGGAGGGT 60.286 66.667 28.27 0.00 38.69 4.34
1573 1593 3.793144 CAAAGGAGCGCACCGAGC 61.793 66.667 18.47 0.00 40.87 5.03
1574 1594 3.121030 CCAAAGGAGCGCACCGAG 61.121 66.667 18.47 11.65 34.73 4.63
1575 1595 3.469863 AACCAAAGGAGCGCACCGA 62.470 57.895 18.47 0.00 34.73 4.69
1576 1596 2.966309 GAACCAAAGGAGCGCACCG 61.966 63.158 18.47 6.59 34.73 4.94
1577 1597 2.626780 GGAACCAAAGGAGCGCACC 61.627 63.158 16.88 16.88 0.00 5.01
1578 1598 2.954611 GGAACCAAAGGAGCGCAC 59.045 61.111 11.47 1.97 0.00 5.34
1579 1599 2.668212 CGGAACCAAAGGAGCGCA 60.668 61.111 11.47 0.00 0.00 6.09
1580 1600 4.103103 GCGGAACCAAAGGAGCGC 62.103 66.667 0.00 0.00 0.00 5.92
1581 1601 3.431725 GGCGGAACCAAAGGAGCG 61.432 66.667 0.00 0.00 38.86 5.03
1582 1602 3.062466 GGGCGGAACCAAAGGAGC 61.062 66.667 0.00 0.00 42.05 4.70
1583 1603 2.746277 CGGGCGGAACCAAAGGAG 60.746 66.667 0.00 0.00 42.05 3.69
1586 1606 3.431725 GAGCGGGCGGAACCAAAG 61.432 66.667 0.00 0.00 42.05 2.77
1600 1620 4.724602 TGTCGCACGAGCTGGAGC 62.725 66.667 8.06 8.06 39.10 4.70
1601 1621 2.505777 CTGTCGCACGAGCTGGAG 60.506 66.667 1.44 0.00 39.10 3.86
1602 1622 4.724602 GCTGTCGCACGAGCTGGA 62.725 66.667 1.44 0.00 39.10 3.86
1623 1643 4.994756 CACAGGTTGGCCCCACCC 62.995 72.222 16.12 0.00 37.83 4.61
1624 1644 4.218686 ACACAGGTTGGCCCCACC 62.219 66.667 12.56 12.56 39.84 4.61
1625 1645 2.597510 GACACAGGTTGGCCCCAC 60.598 66.667 0.00 0.00 34.57 4.61
1630 1650 1.678970 GGGATGGACACAGGTTGGC 60.679 63.158 0.00 0.00 0.00 4.52
1631 1651 0.322816 CTGGGATGGACACAGGTTGG 60.323 60.000 0.00 0.00 45.46 3.77
1632 1652 1.283029 ATCTGGGATGGACACAGGTTG 59.717 52.381 0.00 0.00 41.03 3.77
1633 1653 1.561542 GATCTGGGATGGACACAGGTT 59.438 52.381 0.00 0.00 44.25 3.50
1637 1657 0.543277 GCAGATCTGGGATGGACACA 59.457 55.000 23.89 0.00 0.00 3.72
1638 1658 0.179034 GGCAGATCTGGGATGGACAC 60.179 60.000 23.89 3.89 0.00 3.67
1639 1659 1.348008 GGGCAGATCTGGGATGGACA 61.348 60.000 23.89 0.00 0.00 4.02
1640 1660 1.059006 AGGGCAGATCTGGGATGGAC 61.059 60.000 23.89 5.34 0.00 4.02
1641 1661 0.327867 AAGGGCAGATCTGGGATGGA 60.328 55.000 23.89 0.00 0.00 3.41
1642 1662 0.178998 CAAGGGCAGATCTGGGATGG 60.179 60.000 23.89 0.00 0.00 3.51
1643 1663 0.822532 GCAAGGGCAGATCTGGGATG 60.823 60.000 23.89 0.00 40.72 3.51
1644 1664 1.535685 GCAAGGGCAGATCTGGGAT 59.464 57.895 23.89 0.00 40.72 3.85
1645 1665 2.683465 GGCAAGGGCAGATCTGGGA 61.683 63.158 23.89 0.00 43.71 4.37
1646 1666 1.348008 TAGGCAAGGGCAGATCTGGG 61.348 60.000 23.89 0.00 43.71 4.45
1647 1667 0.108207 CTAGGCAAGGGCAGATCTGG 59.892 60.000 23.89 8.12 43.71 3.86
1648 1668 0.835941 ACTAGGCAAGGGCAGATCTG 59.164 55.000 18.84 18.84 43.71 2.90
1649 1669 0.835941 CACTAGGCAAGGGCAGATCT 59.164 55.000 0.00 0.00 43.71 2.75
1650 1670 0.179034 CCACTAGGCAAGGGCAGATC 60.179 60.000 0.00 0.00 43.71 2.75
1651 1671 0.916358 ACCACTAGGCAAGGGCAGAT 60.916 55.000 0.00 0.00 43.71 2.90
1652 1672 1.538876 ACCACTAGGCAAGGGCAGA 60.539 57.895 0.00 0.00 43.71 4.26
1653 1673 1.078143 GACCACTAGGCAAGGGCAG 60.078 63.158 0.00 0.00 43.71 4.85
1654 1674 1.841302 CTGACCACTAGGCAAGGGCA 61.841 60.000 0.00 0.00 43.71 5.36
1655 1675 1.078143 CTGACCACTAGGCAAGGGC 60.078 63.158 0.00 0.00 39.06 5.19
1656 1676 0.250513 GACTGACCACTAGGCAAGGG 59.749 60.000 0.00 0.00 39.06 3.95
1657 1677 0.108615 CGACTGACCACTAGGCAAGG 60.109 60.000 0.00 0.00 39.06 3.61
1658 1678 0.108615 CCGACTGACCACTAGGCAAG 60.109 60.000 0.00 0.00 39.06 4.01
1659 1679 1.972198 CCGACTGACCACTAGGCAA 59.028 57.895 0.00 0.00 39.06 4.52
1660 1680 2.646175 GCCGACTGACCACTAGGCA 61.646 63.158 0.00 0.00 43.65 4.75
1661 1681 2.184579 GCCGACTGACCACTAGGC 59.815 66.667 0.00 0.00 39.06 3.93
1662 1682 2.490217 CGCCGACTGACCACTAGG 59.510 66.667 0.00 0.00 42.21 3.02
1663 1683 1.384989 ATCCGCCGACTGACCACTAG 61.385 60.000 0.00 0.00 0.00 2.57
1664 1684 1.379443 ATCCGCCGACTGACCACTA 60.379 57.895 0.00 0.00 0.00 2.74
1665 1685 2.680352 ATCCGCCGACTGACCACT 60.680 61.111 0.00 0.00 0.00 4.00
1666 1686 2.202756 GATCCGCCGACTGACCAC 60.203 66.667 0.00 0.00 0.00 4.16
1667 1687 3.458163 GGATCCGCCGACTGACCA 61.458 66.667 0.00 0.00 0.00 4.02
1696 1716 4.832608 GTTGACGGGCTAGGGGCG 62.833 72.222 0.00 0.00 42.94 6.13
1697 1717 4.832608 CGTTGACGGGCTAGGGGC 62.833 72.222 0.00 0.00 40.90 5.80
1707 1727 1.066114 GTCGAAGAGAGCCGTTGACG 61.066 60.000 0.00 0.00 36.95 4.35
1708 1728 0.733223 GGTCGAAGAGAGCCGTTGAC 60.733 60.000 0.00 0.00 41.28 3.18
1709 1729 1.585006 GGTCGAAGAGAGCCGTTGA 59.415 57.895 0.00 0.00 41.28 3.18
1710 1730 4.170723 GGTCGAAGAGAGCCGTTG 57.829 61.111 0.00 0.00 41.28 4.10
1715 1735 2.802106 CGGAGGGTCGAAGAGAGC 59.198 66.667 0.00 0.00 46.08 4.09
1716 1736 2.776913 GGCGGAGGGTCGAAGAGAG 61.777 68.421 0.00 0.00 36.95 3.20
1717 1737 2.754658 GGCGGAGGGTCGAAGAGA 60.755 66.667 0.00 0.00 36.95 3.10
1718 1738 2.427245 ATGGCGGAGGGTCGAAGAG 61.427 63.158 0.00 0.00 36.95 2.85
1719 1739 2.363795 ATGGCGGAGGGTCGAAGA 60.364 61.111 0.00 0.00 0.00 2.87
1720 1740 2.202932 CATGGCGGAGGGTCGAAG 60.203 66.667 0.00 0.00 0.00 3.79
1721 1741 1.622607 ATTCATGGCGGAGGGTCGAA 61.623 55.000 0.00 0.00 0.00 3.71
1722 1742 2.028125 GATTCATGGCGGAGGGTCGA 62.028 60.000 0.00 0.00 0.00 4.20
1723 1743 1.595382 GATTCATGGCGGAGGGTCG 60.595 63.158 0.00 0.00 0.00 4.79
1724 1744 1.227973 GGATTCATGGCGGAGGGTC 60.228 63.158 0.00 0.00 0.00 4.46
1725 1745 1.694169 AGGATTCATGGCGGAGGGT 60.694 57.895 0.00 0.00 0.00 4.34
1726 1746 1.228063 CAGGATTCATGGCGGAGGG 60.228 63.158 0.00 0.00 0.00 4.30
1727 1747 1.895707 GCAGGATTCATGGCGGAGG 60.896 63.158 0.00 0.00 0.00 4.30
1728 1748 0.883814 GAGCAGGATTCATGGCGGAG 60.884 60.000 0.00 0.00 0.00 4.63
1729 1749 1.146930 GAGCAGGATTCATGGCGGA 59.853 57.895 0.00 0.00 0.00 5.54
1730 1750 1.895707 GGAGCAGGATTCATGGCGG 60.896 63.158 0.00 0.00 0.00 6.13
1731 1751 2.249535 CGGAGCAGGATTCATGGCG 61.250 63.158 0.00 0.00 0.00 5.69
1732 1752 1.895707 CCGGAGCAGGATTCATGGC 60.896 63.158 0.00 0.00 0.00 4.40
1733 1753 1.228063 CCCGGAGCAGGATTCATGG 60.228 63.158 0.73 0.00 0.00 3.66
1734 1754 1.228063 CCCCGGAGCAGGATTCATG 60.228 63.158 0.73 0.00 0.00 3.07
1735 1755 2.455565 CCCCCGGAGCAGGATTCAT 61.456 63.158 0.73 0.00 0.00 2.57
1736 1756 3.089874 CCCCCGGAGCAGGATTCA 61.090 66.667 0.73 0.00 0.00 2.57
1754 1774 2.435059 GGCGGTCTTGGAGCACTC 60.435 66.667 0.00 0.00 0.00 3.51
1755 1775 3.241530 TGGCGGTCTTGGAGCACT 61.242 61.111 0.00 0.00 0.00 4.40
1756 1776 3.050275 GTGGCGGTCTTGGAGCAC 61.050 66.667 0.00 0.00 0.00 4.40
1757 1777 4.329545 GGTGGCGGTCTTGGAGCA 62.330 66.667 0.00 0.00 0.00 4.26
1774 1794 1.309499 TATTTGGCGTGGAAAGGGCG 61.309 55.000 0.00 0.00 0.00 6.13
1775 1795 0.892063 TTATTTGGCGTGGAAAGGGC 59.108 50.000 0.00 0.00 0.00 5.19
1776 1796 2.757868 TCATTATTTGGCGTGGAAAGGG 59.242 45.455 0.00 0.00 0.00 3.95
1777 1797 4.654091 ATCATTATTTGGCGTGGAAAGG 57.346 40.909 0.00 0.00 0.00 3.11
1778 1798 5.278463 CCCTATCATTATTTGGCGTGGAAAG 60.278 44.000 0.00 0.00 0.00 2.62
1779 1799 4.582656 CCCTATCATTATTTGGCGTGGAAA 59.417 41.667 0.00 0.00 0.00 3.13
1780 1800 4.141287 CCCTATCATTATTTGGCGTGGAA 58.859 43.478 0.00 0.00 0.00 3.53
1781 1801 3.497763 CCCCTATCATTATTTGGCGTGGA 60.498 47.826 0.00 0.00 0.00 4.02
1782 1802 2.819608 CCCCTATCATTATTTGGCGTGG 59.180 50.000 0.00 0.00 0.00 4.94
1783 1803 3.486383 ACCCCTATCATTATTTGGCGTG 58.514 45.455 0.00 0.00 0.00 5.34
1784 1804 3.876309 ACCCCTATCATTATTTGGCGT 57.124 42.857 0.00 0.00 0.00 5.68
1785 1805 3.305335 GCAACCCCTATCATTATTTGGCG 60.305 47.826 0.00 0.00 0.00 5.69
1786 1806 3.897505 AGCAACCCCTATCATTATTTGGC 59.102 43.478 0.00 0.00 0.00 4.52
1787 1807 5.711976 CCTAGCAACCCCTATCATTATTTGG 59.288 44.000 0.00 0.00 0.00 3.28
1788 1808 6.306987 ACCTAGCAACCCCTATCATTATTTG 58.693 40.000 0.00 0.00 0.00 2.32
1789 1809 6.530601 ACCTAGCAACCCCTATCATTATTT 57.469 37.500 0.00 0.00 0.00 1.40
1790 1810 6.306987 CAACCTAGCAACCCCTATCATTATT 58.693 40.000 0.00 0.00 0.00 1.40
1791 1811 5.222130 CCAACCTAGCAACCCCTATCATTAT 60.222 44.000 0.00 0.00 0.00 1.28
1792 1812 4.104102 CCAACCTAGCAACCCCTATCATTA 59.896 45.833 0.00 0.00 0.00 1.90
1793 1813 3.117512 CCAACCTAGCAACCCCTATCATT 60.118 47.826 0.00 0.00 0.00 2.57
1794 1814 2.443255 CCAACCTAGCAACCCCTATCAT 59.557 50.000 0.00 0.00 0.00 2.45
1795 1815 1.843851 CCAACCTAGCAACCCCTATCA 59.156 52.381 0.00 0.00 0.00 2.15
1796 1816 1.143073 CCCAACCTAGCAACCCCTATC 59.857 57.143 0.00 0.00 0.00 2.08
1797 1817 1.222567 CCCAACCTAGCAACCCCTAT 58.777 55.000 0.00 0.00 0.00 2.57
1798 1818 1.568118 GCCCAACCTAGCAACCCCTA 61.568 60.000 0.00 0.00 0.00 3.53
1799 1819 2.919096 GCCCAACCTAGCAACCCCT 61.919 63.158 0.00 0.00 0.00 4.79
1800 1820 2.362503 GCCCAACCTAGCAACCCC 60.363 66.667 0.00 0.00 0.00 4.95
1801 1821 1.228737 TTGCCCAACCTAGCAACCC 60.229 57.895 0.00 0.00 43.74 4.11
1802 1822 4.511838 TTGCCCAACCTAGCAACC 57.488 55.556 0.00 0.00 43.74 3.77
1804 1824 1.617850 CAATGTTGCCCAACCTAGCAA 59.382 47.619 8.53 0.00 46.26 3.91
1805 1825 1.255882 CAATGTTGCCCAACCTAGCA 58.744 50.000 8.53 0.00 40.46 3.49
1817 1837 3.511146 ACCATGGACTTAAGGCAATGTTG 59.489 43.478 22.00 11.67 0.00 3.33
1818 1838 3.511146 CACCATGGACTTAAGGCAATGTT 59.489 43.478 22.00 7.43 0.00 2.71
1819 1839 3.091545 CACCATGGACTTAAGGCAATGT 58.908 45.455 22.00 9.38 0.00 2.71
1820 1840 2.428171 CCACCATGGACTTAAGGCAATG 59.572 50.000 21.47 17.81 40.96 2.82
1821 1841 2.042979 ACCACCATGGACTTAAGGCAAT 59.957 45.455 21.47 0.18 40.96 3.56
1822 1842 1.427368 ACCACCATGGACTTAAGGCAA 59.573 47.619 21.47 0.00 40.96 4.52
1823 1843 1.004277 GACCACCATGGACTTAAGGCA 59.996 52.381 21.47 0.00 40.96 4.75
1824 1844 1.282157 AGACCACCATGGACTTAAGGC 59.718 52.381 21.47 2.88 39.42 4.35
1830 1850 1.420138 ACGAAAAGACCACCATGGACT 59.580 47.619 21.47 9.09 44.11 3.85
1831 1851 1.804748 GACGAAAAGACCACCATGGAC 59.195 52.381 21.47 6.81 40.96 4.02
1832 1852 1.418264 TGACGAAAAGACCACCATGGA 59.582 47.619 21.47 0.00 40.96 3.41
1833 1853 1.535462 GTGACGAAAAGACCACCATGG 59.465 52.381 11.19 11.19 45.02 3.66
1834 1854 1.535462 GGTGACGAAAAGACCACCATG 59.465 52.381 0.00 0.00 42.28 3.66
1835 1855 1.544759 GGGTGACGAAAAGACCACCAT 60.545 52.381 11.80 0.00 43.45 3.55
1836 1856 0.179040 GGGTGACGAAAAGACCACCA 60.179 55.000 11.80 0.00 43.45 4.17
1837 1857 0.887836 GGGGTGACGAAAAGACCACC 60.888 60.000 0.00 0.00 42.12 4.61
1838 1858 1.226030 CGGGGTGACGAAAAGACCAC 61.226 60.000 0.00 0.00 35.47 4.16
1839 1859 1.070105 CGGGGTGACGAAAAGACCA 59.930 57.895 0.00 0.00 35.47 4.02
1840 1860 2.322830 GCGGGGTGACGAAAAGACC 61.323 63.158 0.00 0.00 35.47 3.85
1841 1861 1.595929 TGCGGGGTGACGAAAAGAC 60.596 57.895 0.00 0.00 35.47 3.01
1842 1862 1.595929 GTGCGGGGTGACGAAAAGA 60.596 57.895 0.00 0.00 35.47 2.52
1843 1863 2.613506 GGTGCGGGGTGACGAAAAG 61.614 63.158 0.00 0.00 35.47 2.27
1844 1864 2.592287 GGTGCGGGGTGACGAAAA 60.592 61.111 0.00 0.00 35.47 2.29
1845 1865 3.818121 CTGGTGCGGGGTGACGAAA 62.818 63.158 0.00 0.00 35.47 3.46
1846 1866 4.308458 CTGGTGCGGGGTGACGAA 62.308 66.667 0.00 0.00 35.47 3.85
1870 1890 3.933722 ATCGCCATGGCTCGGAGG 61.934 66.667 33.07 17.27 39.32 4.30
1871 1891 2.664185 CATCGCCATGGCTCGGAG 60.664 66.667 33.07 18.02 39.32 4.63
1872 1892 4.240103 CCATCGCCATGGCTCGGA 62.240 66.667 33.07 23.37 43.55 4.55
1879 1899 0.179037 AGTGTCCATCCATCGCCATG 60.179 55.000 0.00 0.00 0.00 3.66
1880 1900 0.179037 CAGTGTCCATCCATCGCCAT 60.179 55.000 0.00 0.00 0.00 4.40
1881 1901 1.221566 CAGTGTCCATCCATCGCCA 59.778 57.895 0.00 0.00 0.00 5.69
1882 1902 1.524621 CCAGTGTCCATCCATCGCC 60.525 63.158 0.00 0.00 0.00 5.54
1883 1903 0.811616 GACCAGTGTCCATCCATCGC 60.812 60.000 0.00 0.00 35.34 4.58
1884 1904 3.369381 GACCAGTGTCCATCCATCG 57.631 57.895 0.00 0.00 35.34 3.84
1893 1913 1.006102 CACGGACAGGACCAGTGTC 60.006 63.158 5.49 5.49 43.12 3.67
1894 1914 3.138625 CACGGACAGGACCAGTGT 58.861 61.111 0.00 0.00 33.42 3.55
1895 1915 2.357517 GCACGGACAGGACCAGTG 60.358 66.667 0.00 0.00 37.44 3.66
1896 1916 3.991051 CGCACGGACAGGACCAGT 61.991 66.667 0.00 0.00 0.00 4.00
1945 1965 2.983879 ATTGAAGGAGGGCCACCGG 61.984 63.158 14.68 0.00 43.47 5.28
1946 1966 1.750399 CATTGAAGGAGGGCCACCG 60.750 63.158 14.68 0.00 43.47 4.94
1947 1967 2.054453 GCATTGAAGGAGGGCCACC 61.054 63.158 12.67 12.67 36.29 4.61
1948 1968 2.409870 CGCATTGAAGGAGGGCCAC 61.410 63.158 6.18 0.00 36.29 5.01
1949 1969 2.045045 CGCATTGAAGGAGGGCCA 60.045 61.111 6.18 0.00 36.29 5.36
1950 1970 2.631012 ATCCGCATTGAAGGAGGGCC 62.631 60.000 0.00 0.00 40.26 5.80
1951 1971 1.152881 ATCCGCATTGAAGGAGGGC 60.153 57.895 0.00 0.00 40.26 5.19
1952 1972 1.450531 GCATCCGCATTGAAGGAGGG 61.451 60.000 12.79 6.91 40.26 4.30
1953 1973 1.450531 GGCATCCGCATTGAAGGAGG 61.451 60.000 8.33 8.33 40.26 4.30
1954 1974 1.779025 CGGCATCCGCATTGAAGGAG 61.779 60.000 7.27 2.38 41.17 3.69
1955 1975 1.819208 CGGCATCCGCATTGAAGGA 60.819 57.895 4.18 4.18 41.17 3.36
1956 1976 2.717485 CGGCATCCGCATTGAAGG 59.283 61.111 0.00 0.00 41.17 3.46
1957 1977 2.717485 CCGGCATCCGCATTGAAG 59.283 61.111 0.00 0.00 46.86 3.02
1958 1978 3.517140 GCCGGCATCCGCATTGAA 61.517 61.111 24.80 0.00 46.86 2.69
1975 1995 1.133869 CCTTAAAAAGGCGTCGCGG 59.866 57.895 11.75 0.00 42.78 6.46
1976 1996 4.737601 CCTTAAAAAGGCGTCGCG 57.262 55.556 11.75 0.00 42.78 5.87
1984 2004 2.092323 CCCCGGAAGAGCCTTAAAAAG 58.908 52.381 0.73 0.00 0.00 2.27
1985 2005 1.272258 CCCCCGGAAGAGCCTTAAAAA 60.272 52.381 0.73 0.00 0.00 1.94
1986 2006 0.330267 CCCCCGGAAGAGCCTTAAAA 59.670 55.000 0.73 0.00 0.00 1.52
1987 2007 1.996086 CCCCCGGAAGAGCCTTAAA 59.004 57.895 0.73 0.00 0.00 1.52
1988 2008 2.676265 GCCCCCGGAAGAGCCTTAA 61.676 63.158 0.73 0.00 0.00 1.85
1989 2009 3.087906 GCCCCCGGAAGAGCCTTA 61.088 66.667 0.73 0.00 0.00 2.69
1993 2013 4.168291 CAGAGCCCCCGGAAGAGC 62.168 72.222 0.73 0.00 0.00 4.09
1994 2014 1.341156 AATCAGAGCCCCCGGAAGAG 61.341 60.000 0.73 0.00 0.00 2.85
1995 2015 1.306997 AATCAGAGCCCCCGGAAGA 60.307 57.895 0.73 0.00 0.00 2.87
1996 2016 1.147153 GAATCAGAGCCCCCGGAAG 59.853 63.158 0.73 0.00 0.00 3.46
1997 2017 2.375345 GGAATCAGAGCCCCCGGAA 61.375 63.158 0.73 0.00 0.00 4.30
1998 2018 2.768344 GGAATCAGAGCCCCCGGA 60.768 66.667 0.73 0.00 0.00 5.14
1999 2019 4.241555 CGGAATCAGAGCCCCCGG 62.242 72.222 0.00 0.00 36.81 5.73
2000 2020 4.241555 CCGGAATCAGAGCCCCCG 62.242 72.222 0.00 0.00 39.85 5.73
2001 2021 3.090532 ACCGGAATCAGAGCCCCC 61.091 66.667 9.46 0.00 0.00 5.40
2002 2022 2.190578 CACCGGAATCAGAGCCCC 59.809 66.667 9.46 0.00 0.00 5.80
2003 2023 2.514824 GCACCGGAATCAGAGCCC 60.515 66.667 9.46 0.00 0.00 5.19
2004 2024 2.514824 GGCACCGGAATCAGAGCC 60.515 66.667 9.46 5.83 34.71 4.70
2005 2025 1.522580 GAGGCACCGGAATCAGAGC 60.523 63.158 9.46 0.00 0.00 4.09
2006 2026 0.179089 CTGAGGCACCGGAATCAGAG 60.179 60.000 9.46 0.00 41.35 3.35
2007 2027 1.900351 CTGAGGCACCGGAATCAGA 59.100 57.895 9.46 0.00 41.35 3.27
2008 2028 1.817099 GCTGAGGCACCGGAATCAG 60.817 63.158 9.46 16.11 41.68 2.90
2009 2029 2.268920 GCTGAGGCACCGGAATCA 59.731 61.111 9.46 5.44 38.54 2.57
2010 2030 2.514824 GGCTGAGGCACCGGAATC 60.515 66.667 9.46 0.12 40.87 2.52
2011 2031 4.115199 GGGCTGAGGCACCGGAAT 62.115 66.667 9.46 0.00 40.87 3.01
2017 2037 2.203480 TGTTTGGGGCTGAGGCAC 60.203 61.111 8.68 4.33 42.01 5.01
2018 2038 2.203480 GTGTTTGGGGCTGAGGCA 60.203 61.111 8.68 0.00 40.87 4.75
2019 2039 2.991540 GGTGTTTGGGGCTGAGGC 60.992 66.667 0.00 0.00 37.82 4.70
2020 2040 2.672996 CGGTGTTTGGGGCTGAGG 60.673 66.667 0.00 0.00 0.00 3.86
2021 2041 3.365265 GCGGTGTTTGGGGCTGAG 61.365 66.667 0.00 0.00 0.00 3.35
2022 2042 4.966787 GGCGGTGTTTGGGGCTGA 62.967 66.667 0.00 0.00 0.00 4.26
2028 2048 4.326766 CTGCACGGCGGTGTTTGG 62.327 66.667 23.39 9.24 46.13 3.28
2029 2049 3.276091 TCTGCACGGCGGTGTTTG 61.276 61.111 23.39 14.33 46.13 2.93
2030 2050 3.276846 GTCTGCACGGCGGTGTTT 61.277 61.111 23.39 0.00 46.13 2.83
2031 2051 4.235762 AGTCTGCACGGCGGTGTT 62.236 61.111 23.39 4.44 46.13 3.32
2032 2052 4.969196 CAGTCTGCACGGCGGTGT 62.969 66.667 23.39 2.64 46.13 4.16
2042 2062 2.211806 GATTGGATCTCTGCAGTCTGC 58.788 52.381 18.32 18.32 45.29 4.26
2043 2063 2.169978 TGGATTGGATCTCTGCAGTCTG 59.830 50.000 14.67 5.73 31.37 3.51
2044 2064 2.170187 GTGGATTGGATCTCTGCAGTCT 59.830 50.000 14.67 0.00 31.37 3.24
2045 2065 2.170187 AGTGGATTGGATCTCTGCAGTC 59.830 50.000 14.67 3.72 0.00 3.51
2046 2066 2.194859 AGTGGATTGGATCTCTGCAGT 58.805 47.619 14.67 0.00 0.00 4.40
2047 2067 3.133542 TGTAGTGGATTGGATCTCTGCAG 59.866 47.826 7.63 7.63 0.00 4.41
2048 2068 3.106827 TGTAGTGGATTGGATCTCTGCA 58.893 45.455 0.00 0.00 0.00 4.41
2049 2069 3.827008 TGTAGTGGATTGGATCTCTGC 57.173 47.619 0.00 0.00 0.00 4.26
2050 2070 6.493115 ACTCTATGTAGTGGATTGGATCTCTG 59.507 42.308 0.00 0.00 0.00 3.35
2051 2071 6.493115 CACTCTATGTAGTGGATTGGATCTCT 59.507 42.308 0.00 0.00 42.63 3.10
2052 2072 6.686630 CACTCTATGTAGTGGATTGGATCTC 58.313 44.000 0.00 0.00 42.63 2.75
2053 2073 5.011533 GCACTCTATGTAGTGGATTGGATCT 59.988 44.000 10.29 0.00 45.75 2.75
2054 2074 5.221521 TGCACTCTATGTAGTGGATTGGATC 60.222 44.000 10.29 0.00 45.75 3.36
2055 2075 4.655649 TGCACTCTATGTAGTGGATTGGAT 59.344 41.667 10.29 0.00 45.75 3.41
2056 2076 4.030216 TGCACTCTATGTAGTGGATTGGA 58.970 43.478 10.29 0.00 45.75 3.53
2057 2077 4.406648 TGCACTCTATGTAGTGGATTGG 57.593 45.455 10.29 0.00 45.75 3.16
2058 2078 4.272018 GCTTGCACTCTATGTAGTGGATTG 59.728 45.833 10.29 5.96 45.64 2.67
2059 2079 4.163078 AGCTTGCACTCTATGTAGTGGATT 59.837 41.667 10.29 0.00 45.64 3.01
2060 2080 3.708631 AGCTTGCACTCTATGTAGTGGAT 59.291 43.478 10.29 0.00 45.64 3.41
2061 2081 3.099905 AGCTTGCACTCTATGTAGTGGA 58.900 45.455 10.29 5.61 45.75 4.02
2062 2082 3.533606 AGCTTGCACTCTATGTAGTGG 57.466 47.619 10.29 0.00 45.75 4.00
2064 2084 5.010516 CCAGATAGCTTGCACTCTATGTAGT 59.989 44.000 10.64 0.00 0.00 2.73
2065 2085 5.468592 CCAGATAGCTTGCACTCTATGTAG 58.531 45.833 10.64 0.00 0.00 2.74
2066 2086 4.262207 GCCAGATAGCTTGCACTCTATGTA 60.262 45.833 10.64 0.00 33.25 2.29
2067 2087 3.494048 GCCAGATAGCTTGCACTCTATGT 60.494 47.826 10.64 5.28 33.25 2.29
2068 2088 3.065655 GCCAGATAGCTTGCACTCTATG 58.934 50.000 10.64 1.41 33.25 2.23
2069 2089 2.038295 GGCCAGATAGCTTGCACTCTAT 59.962 50.000 6.38 6.61 34.63 1.98
2070 2090 1.414181 GGCCAGATAGCTTGCACTCTA 59.586 52.381 6.38 0.00 34.63 2.43
2071 2091 0.179936 GGCCAGATAGCTTGCACTCT 59.820 55.000 6.38 0.00 34.63 3.24
2072 2092 0.107508 TGGCCAGATAGCTTGCACTC 60.108 55.000 0.00 0.00 34.63 3.51
2073 2093 0.393537 GTGGCCAGATAGCTTGCACT 60.394 55.000 5.11 0.00 34.63 4.40
2074 2094 0.677731 TGTGGCCAGATAGCTTGCAC 60.678 55.000 5.11 3.54 34.63 4.57
2075 2095 0.256752 ATGTGGCCAGATAGCTTGCA 59.743 50.000 14.94 0.77 34.63 4.08
2076 2096 1.066605 CAATGTGGCCAGATAGCTTGC 59.933 52.381 17.01 0.00 32.30 4.01
2077 2097 1.066605 GCAATGTGGCCAGATAGCTTG 59.933 52.381 17.01 12.45 0.00 4.01
2078 2098 1.064166 AGCAATGTGGCCAGATAGCTT 60.064 47.619 17.01 0.00 0.00 3.74
2079 2099 0.549950 AGCAATGTGGCCAGATAGCT 59.450 50.000 17.01 15.77 0.00 3.32
2080 2100 2.149578 CTAGCAATGTGGCCAGATAGC 58.850 52.381 17.01 13.64 0.00 2.97
2081 2101 3.323115 TCTCTAGCAATGTGGCCAGATAG 59.677 47.826 17.01 12.04 31.27 2.08
2082 2102 3.308401 TCTCTAGCAATGTGGCCAGATA 58.692 45.455 17.01 1.25 31.27 1.98
2083 2103 2.121948 TCTCTAGCAATGTGGCCAGAT 58.878 47.619 10.16 10.16 31.27 2.90
2084 2104 1.571955 TCTCTAGCAATGTGGCCAGA 58.428 50.000 5.11 4.74 30.86 3.86
2085 2105 2.617308 CAATCTCTAGCAATGTGGCCAG 59.383 50.000 5.11 0.00 0.00 4.85
2086 2106 2.646930 CAATCTCTAGCAATGTGGCCA 58.353 47.619 0.00 0.00 0.00 5.36
2087 2107 1.336125 GCAATCTCTAGCAATGTGGCC 59.664 52.381 0.00 0.00 0.00 5.36
2088 2108 1.336125 GGCAATCTCTAGCAATGTGGC 59.664 52.381 0.00 0.00 0.00 5.01
2089 2109 1.952296 GGGCAATCTCTAGCAATGTGG 59.048 52.381 0.00 0.00 0.00 4.17
2090 2110 2.877168 GAGGGCAATCTCTAGCAATGTG 59.123 50.000 0.00 0.00 0.00 3.21
2091 2111 2.507058 TGAGGGCAATCTCTAGCAATGT 59.493 45.455 0.00 0.00 34.98 2.71
2092 2112 3.204306 TGAGGGCAATCTCTAGCAATG 57.796 47.619 0.00 0.00 34.98 2.82
2093 2113 3.818180 CTTGAGGGCAATCTCTAGCAAT 58.182 45.455 0.00 0.00 34.98 3.56
2094 2114 3.272574 CTTGAGGGCAATCTCTAGCAA 57.727 47.619 0.00 0.00 34.98 3.91
2095 2115 2.996249 CTTGAGGGCAATCTCTAGCA 57.004 50.000 0.00 0.00 34.98 3.49
2097 2117 2.433604 TGAGCTTGAGGGCAATCTCTAG 59.566 50.000 9.86 7.60 43.94 2.43
2098 2118 2.433604 CTGAGCTTGAGGGCAATCTCTA 59.566 50.000 9.86 0.00 43.94 2.43
2099 2119 1.209990 CTGAGCTTGAGGGCAATCTCT 59.790 52.381 9.86 0.00 43.94 3.10
2100 2120 1.666054 CTGAGCTTGAGGGCAATCTC 58.334 55.000 0.00 0.00 43.89 2.75
2101 2121 0.394080 GCTGAGCTTGAGGGCAATCT 60.394 55.000 0.00 0.00 33.46 2.40
2102 2122 1.712977 CGCTGAGCTTGAGGGCAATC 61.713 60.000 1.78 0.00 32.68 2.67
2103 2123 1.748122 CGCTGAGCTTGAGGGCAAT 60.748 57.895 1.78 0.00 32.68 3.56
2104 2124 2.359107 CGCTGAGCTTGAGGGCAA 60.359 61.111 1.78 0.00 34.17 4.52
2105 2125 3.630013 ACGCTGAGCTTGAGGGCA 61.630 61.111 1.78 0.00 34.17 5.36
2106 2126 3.123620 CACGCTGAGCTTGAGGGC 61.124 66.667 4.78 0.37 28.94 5.19
2107 2127 2.435586 CCACGCTGAGCTTGAGGG 60.436 66.667 12.88 8.65 28.94 4.30
2108 2128 3.123620 GCCACGCTGAGCTTGAGG 61.124 66.667 12.88 4.82 28.94 3.86
2109 2129 3.123620 GGCCACGCTGAGCTTGAG 61.124 66.667 12.88 3.96 28.94 3.02
2144 2164 4.790962 ATCACGCCCAGCAGCAGG 62.791 66.667 0.00 0.00 0.00 4.85
2145 2165 3.200593 GATCACGCCCAGCAGCAG 61.201 66.667 0.00 0.00 0.00 4.24
2146 2166 4.783621 GGATCACGCCCAGCAGCA 62.784 66.667 0.00 0.00 0.00 4.41
2147 2167 4.479993 AGGATCACGCCCAGCAGC 62.480 66.667 0.00 0.00 0.00 5.25
2148 2168 2.513204 CAGGATCACGCCCAGCAG 60.513 66.667 0.00 0.00 0.00 4.24
2149 2169 2.803155 GAACAGGATCACGCCCAGCA 62.803 60.000 0.00 0.00 0.00 4.41
2150 2170 2.045926 AACAGGATCACGCCCAGC 60.046 61.111 0.00 0.00 0.00 4.85
2151 2171 1.811266 CGAACAGGATCACGCCCAG 60.811 63.158 0.00 0.00 0.00 4.45
2152 2172 2.225791 CTCGAACAGGATCACGCCCA 62.226 60.000 0.00 0.00 0.00 5.36
2153 2173 1.519455 CTCGAACAGGATCACGCCC 60.519 63.158 0.00 0.00 0.00 6.13
2154 2174 0.802607 GTCTCGAACAGGATCACGCC 60.803 60.000 0.00 0.00 0.00 5.68
2155 2175 0.802607 GGTCTCGAACAGGATCACGC 60.803 60.000 0.00 0.00 0.00 5.34
2156 2176 0.523546 CGGTCTCGAACAGGATCACG 60.524 60.000 0.00 0.00 39.00 4.35
2157 2177 0.526662 ACGGTCTCGAACAGGATCAC 59.473 55.000 0.00 0.00 40.11 3.06
2158 2178 0.809385 GACGGTCTCGAACAGGATCA 59.191 55.000 0.00 0.00 40.11 2.92
2159 2179 1.096416 AGACGGTCTCGAACAGGATC 58.904 55.000 4.45 0.00 40.11 3.36
2160 2180 1.473278 GAAGACGGTCTCGAACAGGAT 59.527 52.381 11.71 0.00 40.11 3.24
2161 2181 0.879765 GAAGACGGTCTCGAACAGGA 59.120 55.000 11.71 0.00 40.11 3.86
2162 2182 0.454620 CGAAGACGGTCTCGAACAGG 60.455 60.000 11.71 0.00 40.11 4.00
2163 2183 1.066114 GCGAAGACGGTCTCGAACAG 61.066 60.000 24.13 10.38 40.11 3.16
2164 2184 1.081641 GCGAAGACGGTCTCGAACA 60.082 57.895 24.13 0.00 40.11 3.18
2165 2185 3.751470 GCGAAGACGGTCTCGAAC 58.249 61.111 24.13 11.87 40.11 3.95
2173 2193 2.434359 GTGGGGAAGCGAAGACGG 60.434 66.667 0.00 0.00 40.15 4.79
2174 2194 2.809601 CGTGGGGAAGCGAAGACG 60.810 66.667 0.00 0.00 42.93 4.18
2175 2195 3.119096 GCGTGGGGAAGCGAAGAC 61.119 66.667 0.00 0.00 0.00 3.01
2176 2196 4.388499 GGCGTGGGGAAGCGAAGA 62.388 66.667 0.00 0.00 0.00 2.87
2177 2197 4.394712 AGGCGTGGGGAAGCGAAG 62.395 66.667 0.00 0.00 0.00 3.79
2178 2198 4.388499 GAGGCGTGGGGAAGCGAA 62.388 66.667 0.00 0.00 0.00 4.70
2181 2201 3.978571 GAAGGAGGCGTGGGGAAGC 62.979 68.421 0.00 0.00 0.00 3.86
2182 2202 2.269241 GAAGGAGGCGTGGGGAAG 59.731 66.667 0.00 0.00 0.00 3.46
2183 2203 3.702048 CGAAGGAGGCGTGGGGAA 61.702 66.667 0.00 0.00 0.00 3.97
2191 2211 4.400961 AGTGCAGGCGAAGGAGGC 62.401 66.667 0.00 0.00 0.00 4.70
2192 2212 2.435586 CAGTGCAGGCGAAGGAGG 60.436 66.667 0.00 0.00 0.00 4.30
2193 2213 2.435586 CCAGTGCAGGCGAAGGAG 60.436 66.667 0.00 0.00 0.00 3.69
2194 2214 4.704833 GCCAGTGCAGGCGAAGGA 62.705 66.667 0.59 0.00 46.12 3.36
2201 2221 2.753043 GTCCATGGCCAGTGCAGG 60.753 66.667 13.05 8.11 40.13 4.85
2202 2222 2.034532 TGTCCATGGCCAGTGCAG 59.965 61.111 13.05 0.00 40.13 4.41
2203 2223 2.282391 GTGTCCATGGCCAGTGCA 60.282 61.111 13.05 4.68 40.13 4.57
2204 2224 2.034687 AGTGTCCATGGCCAGTGC 59.965 61.111 13.05 1.69 0.00 4.40
2205 2225 2.338015 GCAGTGTCCATGGCCAGTG 61.338 63.158 23.45 23.45 35.55 3.66
2206 2226 2.034687 GCAGTGTCCATGGCCAGT 59.965 61.111 13.05 0.74 0.00 4.00
2207 2227 2.753043 GGCAGTGTCCATGGCCAG 60.753 66.667 13.05 3.10 45.70 4.85
2209 2229 3.064324 GTGGCAGTGTCCATGGCC 61.064 66.667 6.96 3.93 46.58 5.36
2210 2230 3.064324 GGTGGCAGTGTCCATGGC 61.064 66.667 6.96 2.72 43.16 4.40
2211 2231 1.973281 GTGGTGGCAGTGTCCATGG 60.973 63.158 4.97 4.97 38.57 3.66
2212 2232 1.228215 TGTGGTGGCAGTGTCCATG 60.228 57.895 9.13 0.00 38.57 3.66
2213 2233 1.228245 GTGTGGTGGCAGTGTCCAT 60.228 57.895 9.13 0.00 38.57 3.41
2214 2234 2.191908 GTGTGGTGGCAGTGTCCA 59.808 61.111 2.57 2.57 0.00 4.02
2215 2235 2.594592 GGTGTGGTGGCAGTGTCC 60.595 66.667 0.00 0.00 0.00 4.02
2216 2236 2.972505 CGGTGTGGTGGCAGTGTC 60.973 66.667 0.00 0.00 0.00 3.67
2217 2237 3.475494 TCGGTGTGGTGGCAGTGT 61.475 61.111 0.00 0.00 0.00 3.55
2218 2238 2.972505 GTCGGTGTGGTGGCAGTG 60.973 66.667 0.00 0.00 0.00 3.66
2219 2239 4.250305 GGTCGGTGTGGTGGCAGT 62.250 66.667 0.00 0.00 0.00 4.40
2222 2242 4.344865 ATGGGTCGGTGTGGTGGC 62.345 66.667 0.00 0.00 0.00 5.01
2223 2243 2.046314 GATGGGTCGGTGTGGTGG 60.046 66.667 0.00 0.00 0.00 4.61
2224 2244 2.434185 CGATGGGTCGGTGTGGTG 60.434 66.667 0.00 0.00 44.00 4.17
2247 2267 4.704833 TTGTGGCTGCTCCTCGGC 62.705 66.667 0.00 0.00 46.38 5.54
2248 2268 2.435586 CTTGTGGCTGCTCCTCGG 60.436 66.667 0.00 0.00 35.26 4.63
2249 2269 2.435586 CCTTGTGGCTGCTCCTCG 60.436 66.667 0.00 0.00 35.26 4.63
2250 2270 1.673665 CACCTTGTGGCTGCTCCTC 60.674 63.158 0.00 0.00 36.63 3.71
2251 2271 2.433446 CACCTTGTGGCTGCTCCT 59.567 61.111 0.00 0.00 36.63 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.