Multiple sequence alignment - TraesCS6B01G151600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G151600 chr6B 100.000 6847 0 0 1 6847 153962439 153955593 0.000000e+00 12645.0
1 TraesCS6B01G151600 chr6B 84.996 1133 131 26 2197 3294 73892102 73893230 0.000000e+00 1114.0
2 TraesCS6B01G151600 chr6B 85.313 926 112 16 2197 3100 73732047 73732970 0.000000e+00 935.0
3 TraesCS6B01G151600 chr6B 85.205 926 109 17 2197 3100 73628102 73629021 0.000000e+00 926.0
4 TraesCS6B01G151600 chr6B 85.005 927 113 17 2197 3100 73656655 73657578 0.000000e+00 918.0
5 TraesCS6B01G151600 chr6B 84.881 926 116 15 2197 3100 73587879 73588802 0.000000e+00 913.0
6 TraesCS6B01G151600 chr6B 94.444 324 10 2 3717 4040 153958558 153958243 6.170000e-135 492.0
7 TraesCS6B01G151600 chr6B 94.444 324 10 2 3882 4197 153958723 153958400 6.170000e-135 492.0
8 TraesCS6B01G151600 chr6B 86.593 455 44 12 2845 3294 73745518 73745960 2.870000e-133 486.0
9 TraesCS6B01G151600 chr6B 84.362 486 54 8 2820 3294 73596396 73596870 2.250000e-124 457.0
10 TraesCS6B01G151600 chr6B 80.057 697 60 27 6192 6847 153685823 153685165 1.750000e-120 444.0
11 TraesCS6B01G151600 chr6B 80.000 695 60 25 6194 6847 153757425 153756769 2.270000e-119 440.0
12 TraesCS6B01G151600 chr6B 78.384 495 48 23 6369 6840 153400980 153400522 4.070000e-67 267.0
13 TraesCS6B01G151600 chr6B 95.070 142 6 1 3747 3888 153958372 153958232 8.940000e-54 222.0
14 TraesCS6B01G151600 chr6B 95.070 142 6 1 4068 4208 153958693 153958552 8.940000e-54 222.0
15 TraesCS6B01G151600 chr6B 92.063 126 8 2 6192 6317 153401550 153401427 7.060000e-40 176.0
16 TraesCS6B01G151600 chr6B 89.286 140 5 3 2062 2201 41933877 41933748 4.250000e-37 167.0
17 TraesCS6B01G151600 chr6B 85.625 160 15 2 6601 6755 153365466 153365310 1.980000e-35 161.0
18 TraesCS6B01G151600 chr6B 84.971 173 8 6 6221 6375 153676477 153676305 7.110000e-35 159.0
19 TraesCS6B01G151600 chr6B 85.000 160 16 2 6601 6755 153907821 153907665 9.190000e-34 156.0
20 TraesCS6B01G151600 chr6B 84.393 173 9 6 6221 6375 153747789 153747617 3.310000e-33 154.0
21 TraesCS6B01G151600 chr6B 91.262 103 9 0 6602 6704 153453367 153453265 2.570000e-29 141.0
22 TraesCS6B01G151600 chr6B 83.333 96 7 6 604 699 155233883 155233797 5.690000e-11 80.5
23 TraesCS6B01G151600 chr6B 100.000 33 0 0 6169 6201 153685806 153685774 2.060000e-05 62.1
24 TraesCS6B01G151600 chr6B 97.143 35 0 1 6168 6201 153956231 153956197 2.670000e-04 58.4
25 TraesCS6B01G151600 chr6A 95.639 2568 71 11 4068 6601 96986965 96984405 0.000000e+00 4084.0
26 TraesCS6B01G151600 chr6A 95.944 1652 54 7 2245 3888 96988471 96986825 0.000000e+00 2667.0
27 TraesCS6B01G151600 chr6A 84.692 2110 149 65 1 2060 96990631 96988646 0.000000e+00 1947.0
28 TraesCS6B01G151600 chr6A 90.173 1038 89 1 4158 5195 20768829 20769853 0.000000e+00 1339.0
29 TraesCS6B01G151600 chr6A 90.077 1038 90 1 4158 5195 20801546 20802570 0.000000e+00 1334.0
30 TraesCS6B01G151600 chr6A 89.429 1050 82 12 2397 3437 20767291 20768320 0.000000e+00 1297.0
31 TraesCS6B01G151600 chr6A 89.429 1050 82 12 2397 3437 20800008 20801037 0.000000e+00 1297.0
32 TraesCS6B01G151600 chr6A 93.750 160 9 1 3882 4040 96986995 96986836 8.880000e-59 239.0
33 TraesCS6B01G151600 chr6A 89.326 178 15 2 6628 6805 96984407 96984234 3.210000e-53 220.0
34 TraesCS6B01G151600 chr6A 86.957 161 12 3 3587 3745 20768652 20768805 9.130000e-39 172.0
35 TraesCS6B01G151600 chr6A 86.957 161 12 3 3587 3745 20801369 20801522 9.130000e-39 172.0
36 TraesCS6B01G151600 chr6A 76.981 265 41 17 5817 6080 96820792 96820547 4.310000e-27 134.0
37 TraesCS6B01G151600 chr6A 85.294 136 11 3 1292 1421 20766776 20766908 1.550000e-26 132.0
38 TraesCS6B01G151600 chr6A 94.000 50 3 0 2197 2246 96988647 96988598 7.360000e-10 76.8
39 TraesCS6B01G151600 chr6A 91.304 46 3 1 3941 3986 20768786 20768830 2.060000e-05 62.1
40 TraesCS6B01G151600 chr6A 91.304 46 3 1 4098 4143 20768786 20768830 2.060000e-05 62.1
41 TraesCS6B01G151600 chr6A 91.304 46 3 1 3941 3986 20801503 20801547 2.060000e-05 62.1
42 TraesCS6B01G151600 chr6A 91.304 46 3 1 4098 4143 20801503 20801547 2.060000e-05 62.1
43 TraesCS6B01G151600 chr6A 90.909 44 2 2 6200 6243 96984862 96984821 2.670000e-04 58.4
44 TraesCS6B01G151600 chr6A 90.698 43 3 1 3777 3819 20768786 20768827 1.000000e-03 56.5
45 TraesCS6B01G151600 chr6A 90.698 43 3 1 3777 3819 20801503 20801544 1.000000e-03 56.5
46 TraesCS6B01G151600 chr6D 97.735 2252 39 6 4068 6310 80522818 80520570 0.000000e+00 3866.0
47 TraesCS6B01G151600 chr6D 94.340 1696 72 12 2197 3888 80524353 80522678 0.000000e+00 2579.0
48 TraesCS6B01G151600 chr6D 88.905 2091 137 29 1 2060 80526378 80524352 0.000000e+00 2488.0
49 TraesCS6B01G151600 chr6D 92.199 282 20 1 6566 6847 80520310 80520031 1.380000e-106 398.0
50 TraesCS6B01G151600 chr6D 98.104 211 4 0 6317 6527 80520529 80520319 1.080000e-97 368.0
51 TraesCS6B01G151600 chr6D 93.750 160 9 1 3882 4040 80522848 80522689 8.880000e-59 239.0
52 TraesCS6B01G151600 chr6D 86.391 169 9 4 6221 6375 80513055 80512887 9.130000e-39 172.0
53 TraesCS6B01G151600 chr6D 82.292 96 8 6 604 699 81116710 81116624 2.650000e-09 75.0
54 TraesCS6B01G151600 chr6D 77.692 130 18 5 6074 6201 80520757 80520637 1.230000e-07 69.4
55 TraesCS6B01G151600 chr6D 93.182 44 1 2 6200 6243 80520719 80520678 5.730000e-06 63.9
56 TraesCS6B01G151600 chrUn 85.625 480 53 11 2820 3294 300243341 300243809 2.220000e-134 490.0
57 TraesCS6B01G151600 chrUn 85.417 480 54 11 2820 3294 300248053 300248521 1.030000e-132 484.0
58 TraesCS6B01G151600 chrUn 87.662 154 9 3 2052 2205 86630856 86630713 3.280000e-38 171.0
59 TraesCS6B01G151600 chr3D 90.647 139 11 1 2062 2198 423854305 423854443 4.220000e-42 183.0
60 TraesCS6B01G151600 chr3D 85.350 157 13 7 2054 2210 587347572 587347426 3.310000e-33 154.0
61 TraesCS6B01G151600 chr1D 88.742 151 7 3 2057 2207 5441530 5441670 7.060000e-40 176.0
62 TraesCS6B01G151600 chr7B 89.781 137 4 3 2062 2198 595783759 595783633 4.250000e-37 167.0
63 TraesCS6B01G151600 chr3B 87.013 154 8 4 2048 2199 655858569 655858712 5.490000e-36 163.0
64 TraesCS6B01G151600 chr5B 86.076 158 8 6 2042 2198 125257118 125256974 2.560000e-34 158.0
65 TraesCS6B01G151600 chr5B 85.621 153 10 5 2047 2198 563516643 563516784 4.280000e-32 150.0
66 TraesCS6B01G151600 chr5B 85.714 140 16 3 2062 2201 24046238 24046103 1.990000e-30 145.0
67 TraesCS6B01G151600 chr7A 86.577 149 10 2 2058 2206 105464286 105464148 9.190000e-34 156.0
68 TraesCS6B01G151600 chr7A 91.549 71 4 1 2129 2199 332418601 332418669 5.650000e-16 97.1
69 TraesCS6B01G151600 chr7D 86.486 148 9 5 2059 2205 134010179 134010316 1.190000e-32 152.0
70 TraesCS6B01G151600 chr4A 83.846 130 10 4 2056 2184 681935069 681935188 5.610000e-21 113.0
71 TraesCS6B01G151600 chr5D 95.522 67 3 0 2132 2198 34445583 34445517 2.610000e-19 108.0
72 TraesCS6B01G151600 chr4D 95.522 67 3 0 2132 2198 71380981 71380915 2.610000e-19 108.0
73 TraesCS6B01G151600 chr2A 95.522 67 3 0 2132 2198 183896073 183896007 2.610000e-19 108.0
74 TraesCS6B01G151600 chr1A 90.667 75 7 0 2124 2198 564416672 564416746 4.370000e-17 100.0
75 TraesCS6B01G151600 chr2B 92.754 69 4 1 2132 2200 26724735 26724668 1.570000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G151600 chr6B 153955593 153962439 6846 True 12645.000000 12645 100.000000 1 6847 1 chr6B.!!$R8 6846
1 TraesCS6B01G151600 chr6B 73892102 73893230 1128 False 1114.000000 1114 84.996000 2197 3294 1 chr6B.!!$F7 1097
2 TraesCS6B01G151600 chr6B 73732047 73732970 923 False 935.000000 935 85.313000 2197 3100 1 chr6B.!!$F5 903
3 TraesCS6B01G151600 chr6B 73628102 73629021 919 False 926.000000 926 85.205000 2197 3100 1 chr6B.!!$F3 903
4 TraesCS6B01G151600 chr6B 73656655 73657578 923 False 918.000000 918 85.005000 2197 3100 1 chr6B.!!$F4 903
5 TraesCS6B01G151600 chr6B 73587879 73588802 923 False 913.000000 913 84.881000 2197 3100 1 chr6B.!!$F1 903
6 TraesCS6B01G151600 chr6B 153756769 153757425 656 True 440.000000 440 80.000000 6194 6847 1 chr6B.!!$R6 653
7 TraesCS6B01G151600 chr6B 153956197 153958723 2526 True 297.280000 492 95.234200 3717 6201 5 chr6B.!!$R12 2484
8 TraesCS6B01G151600 chr6B 153685165 153685823 658 True 253.050000 444 90.028500 6169 6847 2 chr6B.!!$R11 678
9 TraesCS6B01G151600 chr6B 153400522 153401550 1028 True 221.500000 267 85.223500 6192 6840 2 chr6B.!!$R10 648
10 TraesCS6B01G151600 chr6A 96984234 96990631 6397 True 1327.457143 4084 92.037143 1 6805 7 chr6A.!!$R2 6804
11 TraesCS6B01G151600 chr6A 20800008 20802570 2562 False 497.283333 1334 89.961500 2397 5195 6 chr6A.!!$F2 2798
12 TraesCS6B01G151600 chr6A 20766776 20769853 3077 False 445.814286 1339 89.308429 1292 5195 7 chr6A.!!$F1 3903
13 TraesCS6B01G151600 chr6D 80520031 80526378 6347 True 1258.912500 3866 91.988375 1 6847 8 chr6D.!!$R3 6846

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
117 119 0.034089 GCCCCAACCACTCTAGCAAT 60.034 55.000 0.00 0.0 0.00 3.56 F
179 181 0.389948 GTCGGAAAGTCATCACCGCT 60.390 55.000 0.00 0.0 44.19 5.52 F
1805 1895 0.321919 TCCATGTCAAGCTGCTGTCC 60.322 55.000 1.35 0.0 0.00 4.02 F
2077 2181 0.035152 TACTACTCCCTCCGTCGCAA 60.035 55.000 0.00 0.0 0.00 4.85 F
2081 2185 0.036306 ACTCCCTCCGTCGCAAAATT 59.964 50.000 0.00 0.0 0.00 1.82 F
3017 3279 0.322456 GCAACCATCAGTACCCAGCA 60.322 55.000 0.00 0.0 0.00 4.41 F
3510 3778 2.282745 GGCTTCCAGGCTTGCTGT 60.283 61.111 0.00 0.0 37.85 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1713 1795 0.034477 CCCCTGCCGTCCTTACAAAT 60.034 55.000 0.0 0.0 0.00 2.32 R
2058 2162 0.035152 TTGCGACGGAGGGAGTAGTA 60.035 55.000 0.0 0.0 0.00 1.82 R
2852 3111 0.179089 CCCTTCCGAGATCAGCACAG 60.179 60.000 0.0 0.0 0.00 3.66 R
3262 3529 1.065551 GGCATGATAACCCGCAAGAAC 59.934 52.381 0.0 0.0 43.02 3.01 R
4062 4767 4.471386 AGAGTTGCTATTGTATGGACTGGT 59.529 41.667 0.0 0.0 0.00 4.00 R
4111 4816 0.813821 GAGGAAACAGAGCAATGGGC 59.186 55.000 0.0 0.0 45.30 5.36 R
6344 7102 5.689383 AGCAAAGTAATCGAAAGCAAAGA 57.311 34.783 0.0 0.0 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 58 7.554560 AGATATTATAAACAGGTCCCTAGGGT 58.445 38.462 27.58 8.93 36.47 4.34
112 114 3.712907 GCCGCCCCAACCACTCTA 61.713 66.667 0.00 0.00 0.00 2.43
117 119 0.034089 GCCCCAACCACTCTAGCAAT 60.034 55.000 0.00 0.00 0.00 3.56
123 125 3.054802 CCAACCACTCTAGCAATCTTCCT 60.055 47.826 0.00 0.00 0.00 3.36
124 126 3.902881 ACCACTCTAGCAATCTTCCTG 57.097 47.619 0.00 0.00 0.00 3.86
179 181 0.389948 GTCGGAAAGTCATCACCGCT 60.390 55.000 0.00 0.00 44.19 5.52
183 185 2.093783 CGGAAAGTCATCACCGCTAAAC 59.906 50.000 0.00 0.00 38.98 2.01
184 186 3.071479 GGAAAGTCATCACCGCTAAACA 58.929 45.455 0.00 0.00 0.00 2.83
188 190 3.740115 AGTCATCACCGCTAAACAAACT 58.260 40.909 0.00 0.00 0.00 2.66
190 192 4.024048 AGTCATCACCGCTAAACAAACTTG 60.024 41.667 0.00 0.00 0.00 3.16
201 203 6.379386 GCTAAACAAACTTGGAGGATAACAC 58.621 40.000 0.00 0.00 0.00 3.32
204 206 6.391227 AACAAACTTGGAGGATAACACAAG 57.609 37.500 0.00 0.00 44.32 3.16
208 210 2.380084 TGGAGGATAACACAAGTCGC 57.620 50.000 0.00 0.00 0.00 5.19
209 211 1.621317 TGGAGGATAACACAAGTCGCA 59.379 47.619 0.00 0.00 0.00 5.10
216 219 2.254546 AACACAAGTCGCAGAATCCA 57.745 45.000 0.00 0.00 39.69 3.41
224 227 5.473504 ACAAGTCGCAGAATCCAAAACTAAT 59.526 36.000 0.00 0.00 39.69 1.73
235 238 9.046296 AGAATCCAAAACTAATGATGACGATAC 57.954 33.333 0.00 0.00 0.00 2.24
245 248 8.246871 ACTAATGATGACGATACTGTGATATGG 58.753 37.037 0.00 0.00 0.00 2.74
344 350 3.343380 ACGCAATGCACATCACATATG 57.657 42.857 5.91 0.00 0.00 1.78
348 354 4.496840 CGCAATGCACATCACATATGACTT 60.497 41.667 10.38 0.00 37.79 3.01
349 355 5.345702 GCAATGCACATCACATATGACTTT 58.654 37.500 10.38 0.00 37.79 2.66
353 359 5.941733 TGCACATCACATATGACTTTTCAC 58.058 37.500 10.38 0.00 37.79 3.18
404 410 4.900635 ATCACGCAACAACTTTTTCTCT 57.099 36.364 0.00 0.00 0.00 3.10
407 413 3.478516 CACGCAACAACTTTTTCTCTTCG 59.521 43.478 0.00 0.00 0.00 3.79
414 420 7.644157 GCAACAACTTTTTCTCTTCGTCTATTT 59.356 33.333 0.00 0.00 0.00 1.40
415 421 8.947940 CAACAACTTTTTCTCTTCGTCTATTTG 58.052 33.333 0.00 0.00 0.00 2.32
431 437 8.454894 TCGTCTATTTGACTGATCTATCATAGC 58.545 37.037 0.00 0.00 43.25 2.97
440 446 7.082700 ACTGATCTATCATAGCATAGACACG 57.917 40.000 0.00 0.00 38.04 4.49
441 447 6.094742 ACTGATCTATCATAGCATAGACACGG 59.905 42.308 0.00 0.00 38.04 4.94
446 452 2.095212 TCATAGCATAGACACGGATCGC 60.095 50.000 0.00 0.00 0.00 4.58
465 471 2.190981 GCCGGTTAGATGAGTAACACG 58.809 52.381 1.90 0.00 35.00 4.49
468 474 2.852413 CGGTTAGATGAGTAACACGCAG 59.148 50.000 0.00 0.00 35.00 5.18
528 538 7.472543 GTGGAAGGTTACACAATGTTATGATC 58.527 38.462 0.00 0.00 41.73 2.92
530 540 7.552687 TGGAAGGTTACACAATGTTATGATCTC 59.447 37.037 0.00 0.00 0.00 2.75
537 547 5.931724 ACACAATGTTATGATCTCGTGTGAA 59.068 36.000 7.41 0.00 35.20 3.18
557 567 7.715249 GTGTGAAAATAGACATAGATTGCCCTA 59.285 37.037 0.00 0.00 0.00 3.53
572 582 8.773033 AGATTGCCCTAATTTTTCATGTCTAT 57.227 30.769 0.00 0.00 0.00 1.98
592 602 1.748493 TGTCCAAAGTGTGAAAGCACC 59.252 47.619 0.00 0.00 44.51 5.01
600 610 3.294493 TGAAAGCACCCAAGCCGC 61.294 61.111 0.00 0.00 34.23 6.53
601 611 4.404654 GAAAGCACCCAAGCCGCG 62.405 66.667 0.00 0.00 34.23 6.46
645 655 3.763897 CTGCCTAACCAAAACCAGCTAAT 59.236 43.478 0.00 0.00 0.00 1.73
647 657 5.326069 TGCCTAACCAAAACCAGCTAATAA 58.674 37.500 0.00 0.00 0.00 1.40
649 659 5.184287 GCCTAACCAAAACCAGCTAATAACA 59.816 40.000 0.00 0.00 0.00 2.41
650 660 6.617879 CCTAACCAAAACCAGCTAATAACAC 58.382 40.000 0.00 0.00 0.00 3.32
651 661 6.433093 CCTAACCAAAACCAGCTAATAACACT 59.567 38.462 0.00 0.00 0.00 3.55
732 742 2.044946 ATGTGGAAAGCCGGGAGC 60.045 61.111 2.18 0.00 44.25 4.70
831 852 1.077089 GGAGTTAACCTCGCGTGCTC 61.077 60.000 5.77 5.12 41.46 4.26
832 853 1.403972 GAGTTAACCTCGCGTGCTCG 61.404 60.000 5.77 3.31 40.37 5.03
833 854 1.731969 GTTAACCTCGCGTGCTCGT 60.732 57.895 5.77 0.00 39.49 4.18
834 855 0.454957 GTTAACCTCGCGTGCTCGTA 60.455 55.000 5.77 0.00 39.49 3.43
1056 1102 1.067582 CCCGATTCCTACGCTGTCC 59.932 63.158 0.00 0.00 0.00 4.02
1332 1409 2.735823 GCGGTAAATTCGATCGGTAGT 58.264 47.619 16.41 0.00 0.00 2.73
1333 1410 2.470257 GCGGTAAATTCGATCGGTAGTG 59.530 50.000 16.41 0.00 0.00 2.74
1334 1411 3.047796 CGGTAAATTCGATCGGTAGTGG 58.952 50.000 16.41 0.00 0.00 4.00
1411 1492 4.682334 TACGGCGGTGGAGGTGGA 62.682 66.667 13.24 0.00 0.00 4.02
1443 1524 2.509336 CATGTGGTCGCGGGAGAC 60.509 66.667 6.13 3.41 40.25 3.36
1713 1795 5.106078 GGATGGTTTTATCTGTTTTGCGGTA 60.106 40.000 0.00 0.00 0.00 4.02
1805 1895 0.321919 TCCATGTCAAGCTGCTGTCC 60.322 55.000 1.35 0.00 0.00 4.02
1922 2026 3.326588 ACTTAATGTGCCTGTGTCTGGTA 59.673 43.478 0.00 0.00 0.00 3.25
1973 2077 2.094545 GCATTGCCAGTCTTAACCCAAG 60.095 50.000 0.00 0.00 35.38 3.61
2009 2113 5.266242 CCTCAAAAGAGTTGAACTTTGTCG 58.734 41.667 0.00 0.00 37.59 4.35
2058 2162 5.869579 TGCAAGATCTTCCTGAAAGTTACT 58.130 37.500 4.57 0.00 36.31 2.24
2059 2163 7.004555 TGCAAGATCTTCCTGAAAGTTACTA 57.995 36.000 4.57 0.00 36.31 1.82
2060 2164 6.874134 TGCAAGATCTTCCTGAAAGTTACTAC 59.126 38.462 4.57 0.00 36.31 2.73
2061 2165 7.100409 GCAAGATCTTCCTGAAAGTTACTACT 58.900 38.462 4.57 0.00 36.31 2.57
2062 2166 8.251721 GCAAGATCTTCCTGAAAGTTACTACTA 58.748 37.037 4.57 0.00 36.31 1.82
2063 2167 9.575783 CAAGATCTTCCTGAAAGTTACTACTAC 57.424 37.037 4.57 0.00 36.31 2.73
2064 2168 9.536510 AAGATCTTCCTGAAAGTTACTACTACT 57.463 33.333 0.88 0.00 36.31 2.57
2065 2169 9.181061 AGATCTTCCTGAAAGTTACTACTACTC 57.819 37.037 0.00 0.00 36.31 2.59
2066 2170 7.700022 TCTTCCTGAAAGTTACTACTACTCC 57.300 40.000 0.00 0.00 36.31 3.85
2067 2171 6.662663 TCTTCCTGAAAGTTACTACTACTCCC 59.337 42.308 0.00 0.00 36.31 4.30
2068 2172 6.150034 TCCTGAAAGTTACTACTACTCCCT 57.850 41.667 0.00 0.00 33.17 4.20
2069 2173 6.186234 TCCTGAAAGTTACTACTACTCCCTC 58.814 44.000 0.00 0.00 33.17 4.30
2070 2174 5.360429 CCTGAAAGTTACTACTACTCCCTCC 59.640 48.000 0.00 0.00 33.17 4.30
2071 2175 4.946157 TGAAAGTTACTACTACTCCCTCCG 59.054 45.833 0.00 0.00 33.17 4.63
2072 2176 4.582973 AAGTTACTACTACTCCCTCCGT 57.417 45.455 0.00 0.00 33.17 4.69
2073 2177 4.149511 AGTTACTACTACTCCCTCCGTC 57.850 50.000 0.00 0.00 31.21 4.79
2074 2178 2.869192 GTTACTACTACTCCCTCCGTCG 59.131 54.545 0.00 0.00 0.00 5.12
2075 2179 0.463474 ACTACTACTCCCTCCGTCGC 60.463 60.000 0.00 0.00 0.00 5.19
2076 2180 0.463295 CTACTACTCCCTCCGTCGCA 60.463 60.000 0.00 0.00 0.00 5.10
2077 2181 0.035152 TACTACTCCCTCCGTCGCAA 60.035 55.000 0.00 0.00 0.00 4.85
2078 2182 0.896940 ACTACTCCCTCCGTCGCAAA 60.897 55.000 0.00 0.00 0.00 3.68
2079 2183 0.245539 CTACTCCCTCCGTCGCAAAA 59.754 55.000 0.00 0.00 0.00 2.44
2080 2184 0.899720 TACTCCCTCCGTCGCAAAAT 59.100 50.000 0.00 0.00 0.00 1.82
2081 2185 0.036306 ACTCCCTCCGTCGCAAAATT 59.964 50.000 0.00 0.00 0.00 1.82
2082 2186 0.727398 CTCCCTCCGTCGCAAAATTC 59.273 55.000 0.00 0.00 0.00 2.17
2083 2187 0.323629 TCCCTCCGTCGCAAAATTCT 59.676 50.000 0.00 0.00 0.00 2.40
2084 2188 1.165270 CCCTCCGTCGCAAAATTCTT 58.835 50.000 0.00 0.00 0.00 2.52
2085 2189 1.135689 CCCTCCGTCGCAAAATTCTTG 60.136 52.381 0.00 0.00 0.00 3.02
2086 2190 1.535462 CCTCCGTCGCAAAATTCTTGT 59.465 47.619 0.00 0.00 0.00 3.16
2087 2191 2.412847 CCTCCGTCGCAAAATTCTTGTC 60.413 50.000 0.00 0.00 0.00 3.18
2088 2192 2.480419 CTCCGTCGCAAAATTCTTGTCT 59.520 45.455 0.00 0.00 0.00 3.41
2089 2193 2.875933 TCCGTCGCAAAATTCTTGTCTT 59.124 40.909 0.00 0.00 0.00 3.01
2090 2194 4.059511 TCCGTCGCAAAATTCTTGTCTTA 58.940 39.130 0.00 0.00 0.00 2.10
2091 2195 4.151689 TCCGTCGCAAAATTCTTGTCTTAG 59.848 41.667 0.00 0.00 0.00 2.18
2092 2196 4.151689 CCGTCGCAAAATTCTTGTCTTAGA 59.848 41.667 0.00 0.00 0.00 2.10
2093 2197 5.163854 CCGTCGCAAAATTCTTGTCTTAGAT 60.164 40.000 0.00 0.00 0.00 1.98
2094 2198 6.307155 CGTCGCAAAATTCTTGTCTTAGATT 58.693 36.000 0.00 0.00 0.00 2.40
2095 2199 6.462949 CGTCGCAAAATTCTTGTCTTAGATTC 59.537 38.462 0.00 0.00 0.00 2.52
2096 2200 6.462949 GTCGCAAAATTCTTGTCTTAGATTCG 59.537 38.462 0.00 0.00 0.00 3.34
2097 2201 6.147164 TCGCAAAATTCTTGTCTTAGATTCGT 59.853 34.615 0.00 0.00 0.00 3.85
2098 2202 6.462949 CGCAAAATTCTTGTCTTAGATTCGTC 59.537 38.462 0.00 0.00 0.00 4.20
2099 2203 7.522374 GCAAAATTCTTGTCTTAGATTCGTCT 58.478 34.615 0.00 0.00 0.00 4.18
2100 2204 8.656849 GCAAAATTCTTGTCTTAGATTCGTCTA 58.343 33.333 0.00 0.00 0.00 2.59
2106 2210 9.499585 TTCTTGTCTTAGATTCGTCTAAATACG 57.500 33.333 0.26 0.00 44.19 3.06
2107 2211 8.127327 TCTTGTCTTAGATTCGTCTAAATACGG 58.873 37.037 0.00 0.99 43.05 4.02
2108 2212 7.558161 TGTCTTAGATTCGTCTAAATACGGA 57.442 36.000 0.00 0.00 43.05 4.69
2109 2213 8.162878 TGTCTTAGATTCGTCTAAATACGGAT 57.837 34.615 0.00 0.00 43.73 4.18
2110 2214 8.074370 TGTCTTAGATTCGTCTAAATACGGATG 58.926 37.037 0.00 0.00 41.14 3.51
2111 2215 8.074972 GTCTTAGATTCGTCTAAATACGGATGT 58.925 37.037 0.00 0.00 41.14 3.06
2112 2216 9.276590 TCTTAGATTCGTCTAAATACGGATGTA 57.723 33.333 0.00 0.00 41.14 2.29
2115 2219 8.107399 AGATTCGTCTAAATACGGATGTATCA 57.893 34.615 0.00 0.00 41.14 2.15
2116 2220 8.573885 AGATTCGTCTAAATACGGATGTATCAA 58.426 33.333 0.00 0.00 41.14 2.57
2117 2221 8.744008 ATTCGTCTAAATACGGATGTATCAAG 57.256 34.615 0.00 0.00 39.60 3.02
2118 2222 7.268199 TCGTCTAAATACGGATGTATCAAGT 57.732 36.000 0.00 0.00 40.42 3.16
2119 2223 7.358066 TCGTCTAAATACGGATGTATCAAGTC 58.642 38.462 0.00 0.00 40.42 3.01
2120 2224 7.012610 TCGTCTAAATACGGATGTATCAAGTCA 59.987 37.037 0.00 0.00 40.42 3.41
2121 2225 7.113124 CGTCTAAATACGGATGTATCAAGTCAC 59.887 40.741 0.00 0.00 40.42 3.67
2122 2226 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
2123 2227 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
2124 2228 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
2125 2229 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
2126 2230 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
2127 2231 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
2128 2232 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
2129 2233 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
2130 2234 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
2131 2235 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
2132 2236 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
2139 2243 9.069078 TCAAGTCACGTTTTAGTATTAGATTCG 57.931 33.333 0.00 0.00 0.00 3.34
2140 2244 8.857216 CAAGTCACGTTTTAGTATTAGATTCGT 58.143 33.333 0.00 0.00 0.00 3.85
2141 2245 8.612233 AGTCACGTTTTAGTATTAGATTCGTC 57.388 34.615 0.00 0.00 0.00 4.20
2142 2246 8.457261 AGTCACGTTTTAGTATTAGATTCGTCT 58.543 33.333 0.00 0.00 0.00 4.18
2143 2247 9.708222 GTCACGTTTTAGTATTAGATTCGTCTA 57.292 33.333 0.00 0.00 0.00 2.59
2154 2258 7.813852 ATTAGATTCGTCTAAATACGGATGC 57.186 36.000 0.00 0.00 41.14 3.91
2155 2259 5.196341 AGATTCGTCTAAATACGGATGCA 57.804 39.130 0.00 0.00 41.14 3.96
2156 2260 5.784177 AGATTCGTCTAAATACGGATGCAT 58.216 37.500 0.00 0.00 41.14 3.96
2157 2261 5.864474 AGATTCGTCTAAATACGGATGCATC 59.136 40.000 18.81 18.81 41.14 3.91
2158 2262 4.848562 TCGTCTAAATACGGATGCATCT 57.151 40.909 25.28 10.06 43.05 2.90
2159 2263 5.952526 TCGTCTAAATACGGATGCATCTA 57.047 39.130 25.28 12.00 43.05 1.98
2160 2264 5.939457 TCGTCTAAATACGGATGCATCTAG 58.061 41.667 25.28 20.66 43.05 2.43
2161 2265 5.704053 TCGTCTAAATACGGATGCATCTAGA 59.296 40.000 25.28 18.91 43.05 2.43
2162 2266 5.795939 CGTCTAAATACGGATGCATCTAGAC 59.204 44.000 26.46 26.46 39.19 2.59
2163 2267 6.567891 CGTCTAAATACGGATGCATCTAGACA 60.568 42.308 30.73 19.04 39.19 3.41
2164 2268 7.145985 GTCTAAATACGGATGCATCTAGACAA 58.854 38.462 28.92 16.31 35.93 3.18
2165 2269 7.652105 GTCTAAATACGGATGCATCTAGACAAA 59.348 37.037 28.92 13.47 35.93 2.83
2166 2270 8.367911 TCTAAATACGGATGCATCTAGACAAAT 58.632 33.333 25.28 8.70 0.00 2.32
2167 2271 7.426929 AAATACGGATGCATCTAGACAAATC 57.573 36.000 25.28 5.29 0.00 2.17
2168 2272 4.679373 ACGGATGCATCTAGACAAATCT 57.321 40.909 25.28 1.13 39.15 2.40
2169 2273 5.791336 ACGGATGCATCTAGACAAATCTA 57.209 39.130 25.28 0.00 36.29 1.98
2170 2274 6.161855 ACGGATGCATCTAGACAAATCTAA 57.838 37.500 25.28 0.00 36.98 2.10
2171 2275 6.219473 ACGGATGCATCTAGACAAATCTAAG 58.781 40.000 25.28 3.76 36.98 2.18
2172 2276 6.040955 ACGGATGCATCTAGACAAATCTAAGA 59.959 38.462 25.28 0.00 36.98 2.10
2173 2277 6.364706 CGGATGCATCTAGACAAATCTAAGAC 59.635 42.308 25.28 2.46 36.98 3.01
2174 2278 7.212976 GGATGCATCTAGACAAATCTAAGACA 58.787 38.462 25.28 0.00 36.98 3.41
2175 2279 7.712639 GGATGCATCTAGACAAATCTAAGACAA 59.287 37.037 25.28 0.00 36.98 3.18
2176 2280 8.659925 ATGCATCTAGACAAATCTAAGACAAG 57.340 34.615 0.00 0.00 36.98 3.16
2177 2281 7.840931 TGCATCTAGACAAATCTAAGACAAGA 58.159 34.615 0.00 0.00 36.98 3.02
2178 2282 8.314021 TGCATCTAGACAAATCTAAGACAAGAA 58.686 33.333 0.00 0.00 36.98 2.52
2179 2283 9.323985 GCATCTAGACAAATCTAAGACAAGAAT 57.676 33.333 0.00 0.00 36.98 2.40
2185 2289 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
2186 2290 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2187 2291 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
2188 2292 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2189 2293 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
2190 2294 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2191 2295 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2192 2296 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2193 2297 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2194 2298 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2195 2299 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
2283 2528 4.142609 AGTATAGCATTGTGGTCAGTGG 57.857 45.455 0.00 0.00 32.94 4.00
2354 2599 4.034279 TCGTGTACAAACCAACTTAACTGC 59.966 41.667 0.00 0.00 0.00 4.40
2417 2663 4.990426 AGTTTTTCTTGCATGTGTTATGCC 59.010 37.500 9.15 0.00 43.94 4.40
2666 2921 9.577110 CACAAGATTGATTGCAGTGTTTATTAT 57.423 29.630 0.00 0.00 33.28 1.28
2699 2954 9.981114 TGTGATATACTAATATGGTTCAGTGTG 57.019 33.333 0.00 0.00 0.00 3.82
2852 3111 3.743396 GGCGTGATATTGTGGAGATTCTC 59.257 47.826 5.03 5.03 0.00 2.87
2999 3261 1.424493 CTCTCGATCCCAACGCAAGC 61.424 60.000 0.00 0.00 45.62 4.01
3014 3276 1.886222 GCAAGCAACCATCAGTACCCA 60.886 52.381 0.00 0.00 0.00 4.51
3017 3279 0.322456 GCAACCATCAGTACCCAGCA 60.322 55.000 0.00 0.00 0.00 4.41
3020 3282 2.489329 CAACCATCAGTACCCAGCAAAG 59.511 50.000 0.00 0.00 0.00 2.77
3098 3360 2.667318 CGCAGTTGTACCCGTGCAG 61.667 63.158 10.09 1.50 35.57 4.41
3262 3529 2.364324 CAGATCATCCCATGCAAAAGGG 59.636 50.000 14.36 14.36 46.90 3.95
3510 3778 2.282745 GGCTTCCAGGCTTGCTGT 60.283 61.111 0.00 0.00 37.85 4.40
3524 3792 2.638480 TGCTGTTTCACTGCCTTAGT 57.362 45.000 3.63 0.00 41.58 2.24
3999 4704 7.906611 TGTTTGAACGTTTGAATCATAACTG 57.093 32.000 0.46 4.16 0.00 3.16
4044 4749 6.906584 TCTCGTCGAGCAATAATATTAACG 57.093 37.500 17.61 3.55 0.00 3.18
4045 4750 6.432936 TCTCGTCGAGCAATAATATTAACGT 58.567 36.000 17.61 0.00 0.00 3.99
4046 4751 6.914215 TCTCGTCGAGCAATAATATTAACGTT 59.086 34.615 17.61 5.88 0.00 3.99
4047 4752 7.433131 TCTCGTCGAGCAATAATATTAACGTTT 59.567 33.333 17.61 0.00 0.00 3.60
4048 4753 7.331792 TCGTCGAGCAATAATATTAACGTTTG 58.668 34.615 5.91 0.00 0.00 2.93
4049 4754 7.220491 TCGTCGAGCAATAATATTAACGTTTGA 59.780 33.333 5.91 0.00 0.00 2.69
4050 4755 7.842239 CGTCGAGCAATAATATTAACGTTTGAA 59.158 33.333 5.91 0.00 0.00 2.69
4051 4756 9.646336 GTCGAGCAATAATATTAACGTTTGAAT 57.354 29.630 5.91 3.58 0.00 2.57
4052 4757 9.858247 TCGAGCAATAATATTAACGTTTGAATC 57.142 29.630 5.91 6.49 0.00 2.52
4053 4758 9.644993 CGAGCAATAATATTAACGTTTGAATCA 57.355 29.630 5.91 0.00 0.00 2.57
4064 4769 9.620660 ATTAACGTTTGAATCATCAAGTTTACC 57.379 29.630 5.91 0.00 45.82 2.85
4065 4770 6.627395 ACGTTTGAATCATCAAGTTTACCA 57.373 33.333 0.00 0.00 45.82 3.25
4066 4771 6.668323 ACGTTTGAATCATCAAGTTTACCAG 58.332 36.000 0.00 0.00 45.82 4.00
4067 4772 6.262273 ACGTTTGAATCATCAAGTTTACCAGT 59.738 34.615 0.00 0.00 45.82 4.00
4068 4773 6.797033 CGTTTGAATCATCAAGTTTACCAGTC 59.203 38.462 0.00 0.00 45.82 3.51
4069 4774 6.817765 TTGAATCATCAAGTTTACCAGTCC 57.182 37.500 0.00 0.00 40.59 3.85
4070 4775 5.875224 TGAATCATCAAGTTTACCAGTCCA 58.125 37.500 0.00 0.00 30.99 4.02
4071 4776 6.484288 TGAATCATCAAGTTTACCAGTCCAT 58.516 36.000 0.00 0.00 30.99 3.41
4072 4777 7.629157 TGAATCATCAAGTTTACCAGTCCATA 58.371 34.615 0.00 0.00 30.99 2.74
4073 4778 7.552687 TGAATCATCAAGTTTACCAGTCCATAC 59.447 37.037 0.00 0.00 30.99 2.39
4074 4779 6.367374 TCATCAAGTTTACCAGTCCATACA 57.633 37.500 0.00 0.00 0.00 2.29
4075 4780 6.774673 TCATCAAGTTTACCAGTCCATACAA 58.225 36.000 0.00 0.00 0.00 2.41
4076 4781 7.402054 TCATCAAGTTTACCAGTCCATACAAT 58.598 34.615 0.00 0.00 0.00 2.71
4077 4782 8.544622 TCATCAAGTTTACCAGTCCATACAATA 58.455 33.333 0.00 0.00 0.00 1.90
4078 4783 8.830580 CATCAAGTTTACCAGTCCATACAATAG 58.169 37.037 0.00 0.00 0.00 1.73
4079 4784 6.821665 TCAAGTTTACCAGTCCATACAATAGC 59.178 38.462 0.00 0.00 0.00 2.97
4080 4785 6.308015 AGTTTACCAGTCCATACAATAGCA 57.692 37.500 0.00 0.00 0.00 3.49
4081 4786 6.717289 AGTTTACCAGTCCATACAATAGCAA 58.283 36.000 0.00 0.00 0.00 3.91
4082 4787 6.598064 AGTTTACCAGTCCATACAATAGCAAC 59.402 38.462 0.00 0.00 0.00 4.17
4083 4788 4.844349 ACCAGTCCATACAATAGCAACT 57.156 40.909 0.00 0.00 0.00 3.16
4084 4789 4.770795 ACCAGTCCATACAATAGCAACTC 58.229 43.478 0.00 0.00 0.00 3.01
4085 4790 4.471386 ACCAGTCCATACAATAGCAACTCT 59.529 41.667 0.00 0.00 0.00 3.24
4086 4791 5.045578 ACCAGTCCATACAATAGCAACTCTT 60.046 40.000 0.00 0.00 0.00 2.85
4087 4792 6.156256 ACCAGTCCATACAATAGCAACTCTTA 59.844 38.462 0.00 0.00 0.00 2.10
4088 4793 7.047891 CCAGTCCATACAATAGCAACTCTTAA 58.952 38.462 0.00 0.00 0.00 1.85
4089 4794 7.225538 CCAGTCCATACAATAGCAACTCTTAAG 59.774 40.741 0.00 0.00 0.00 1.85
4090 4795 7.981789 CAGTCCATACAATAGCAACTCTTAAGA 59.018 37.037 4.81 4.81 0.00 2.10
4091 4796 8.709308 AGTCCATACAATAGCAACTCTTAAGAT 58.291 33.333 5.44 0.00 0.00 2.40
4092 4797 9.331282 GTCCATACAATAGCAACTCTTAAGATT 57.669 33.333 5.44 0.00 0.00 2.40
4093 4798 9.905713 TCCATACAATAGCAACTCTTAAGATTT 57.094 29.630 5.44 3.76 0.00 2.17
4098 4803 9.678260 ACAATAGCAACTCTTAAGATTTCTGAT 57.322 29.630 5.44 2.90 0.00 2.90
4100 4805 8.900983 ATAGCAACTCTTAAGATTTCTGATCC 57.099 34.615 5.44 0.00 0.00 3.36
4101 4806 6.715280 AGCAACTCTTAAGATTTCTGATCCA 58.285 36.000 5.44 0.00 0.00 3.41
4102 4807 7.344913 AGCAACTCTTAAGATTTCTGATCCAT 58.655 34.615 5.44 0.00 0.00 3.41
4103 4808 7.833183 AGCAACTCTTAAGATTTCTGATCCATT 59.167 33.333 5.44 0.00 0.00 3.16
4104 4809 8.465201 GCAACTCTTAAGATTTCTGATCCATTT 58.535 33.333 5.44 0.00 0.00 2.32
4112 4817 7.093322 AGATTTCTGATCCATTTTACACTGC 57.907 36.000 0.00 0.00 0.00 4.40
4113 4818 5.643379 TTTCTGATCCATTTTACACTGCC 57.357 39.130 0.00 0.00 0.00 4.85
4114 4819 3.620488 TCTGATCCATTTTACACTGCCC 58.380 45.455 0.00 0.00 0.00 5.36
4115 4820 3.010027 TCTGATCCATTTTACACTGCCCA 59.990 43.478 0.00 0.00 0.00 5.36
4116 4821 3.956199 CTGATCCATTTTACACTGCCCAT 59.044 43.478 0.00 0.00 0.00 4.00
4117 4822 4.352009 TGATCCATTTTACACTGCCCATT 58.648 39.130 0.00 0.00 0.00 3.16
4118 4823 4.160065 TGATCCATTTTACACTGCCCATTG 59.840 41.667 0.00 0.00 0.00 2.82
4119 4824 2.233431 TCCATTTTACACTGCCCATTGC 59.767 45.455 0.00 0.00 41.77 3.56
4120 4825 2.234414 CCATTTTACACTGCCCATTGCT 59.766 45.455 0.00 0.00 42.00 3.91
4121 4826 3.514645 CATTTTACACTGCCCATTGCTC 58.485 45.455 0.00 0.00 42.00 4.26
4122 4827 2.584835 TTTACACTGCCCATTGCTCT 57.415 45.000 0.00 0.00 42.00 4.09
4123 4828 1.825090 TTACACTGCCCATTGCTCTG 58.175 50.000 0.00 0.00 42.00 3.35
4124 4829 0.692476 TACACTGCCCATTGCTCTGT 59.308 50.000 0.00 0.00 42.00 3.41
4125 4830 0.178981 ACACTGCCCATTGCTCTGTT 60.179 50.000 0.00 0.00 42.00 3.16
4126 4831 0.963962 CACTGCCCATTGCTCTGTTT 59.036 50.000 0.00 0.00 42.00 2.83
4127 4832 1.068055 CACTGCCCATTGCTCTGTTTC 60.068 52.381 0.00 0.00 42.00 2.78
4128 4833 0.529378 CTGCCCATTGCTCTGTTTCC 59.471 55.000 0.00 0.00 42.00 3.13
4129 4834 0.112995 TGCCCATTGCTCTGTTTCCT 59.887 50.000 0.00 0.00 42.00 3.36
4130 4835 0.813821 GCCCATTGCTCTGTTTCCTC 59.186 55.000 0.00 0.00 36.87 3.71
4131 4836 1.615384 GCCCATTGCTCTGTTTCCTCT 60.615 52.381 0.00 0.00 36.87 3.69
4132 4837 2.800250 CCCATTGCTCTGTTTCCTCTT 58.200 47.619 0.00 0.00 0.00 2.85
4133 4838 2.490903 CCCATTGCTCTGTTTCCTCTTG 59.509 50.000 0.00 0.00 0.00 3.02
4134 4839 3.152341 CCATTGCTCTGTTTCCTCTTGT 58.848 45.455 0.00 0.00 0.00 3.16
4135 4840 3.571401 CCATTGCTCTGTTTCCTCTTGTT 59.429 43.478 0.00 0.00 0.00 2.83
4136 4841 4.038402 CCATTGCTCTGTTTCCTCTTGTTT 59.962 41.667 0.00 0.00 0.00 2.83
4137 4842 4.637483 TTGCTCTGTTTCCTCTTGTTTG 57.363 40.909 0.00 0.00 0.00 2.93
4138 4843 3.884895 TGCTCTGTTTCCTCTTGTTTGA 58.115 40.909 0.00 0.00 0.00 2.69
4139 4844 4.269183 TGCTCTGTTTCCTCTTGTTTGAA 58.731 39.130 0.00 0.00 0.00 2.69
4140 4845 4.096382 TGCTCTGTTTCCTCTTGTTTGAAC 59.904 41.667 0.00 0.00 0.00 3.18
4141 4846 4.786609 GCTCTGTTTCCTCTTGTTTGAACG 60.787 45.833 0.00 0.00 0.00 3.95
4142 4847 4.258543 TCTGTTTCCTCTTGTTTGAACGT 58.741 39.130 0.00 0.00 0.00 3.99
4143 4848 4.698304 TCTGTTTCCTCTTGTTTGAACGTT 59.302 37.500 0.00 0.00 0.00 3.99
4144 4849 5.182380 TCTGTTTCCTCTTGTTTGAACGTTT 59.818 36.000 0.46 0.00 0.00 3.60
4145 4850 5.157781 TGTTTCCTCTTGTTTGAACGTTTG 58.842 37.500 0.46 0.00 0.00 2.93
4146 4851 5.048643 TGTTTCCTCTTGTTTGAACGTTTGA 60.049 36.000 0.46 0.00 0.00 2.69
4147 4852 5.630661 TTCCTCTTGTTTGAACGTTTGAA 57.369 34.783 0.46 0.00 0.00 2.69
4148 4853 5.828299 TCCTCTTGTTTGAACGTTTGAAT 57.172 34.783 0.46 0.00 0.00 2.57
4149 4854 5.816919 TCCTCTTGTTTGAACGTTTGAATC 58.183 37.500 0.46 0.00 0.00 2.52
4150 4855 5.355630 TCCTCTTGTTTGAACGTTTGAATCA 59.644 36.000 0.46 1.71 0.00 2.57
4151 4856 6.039270 TCCTCTTGTTTGAACGTTTGAATCAT 59.961 34.615 0.46 0.00 0.00 2.45
4152 4857 7.227711 TCCTCTTGTTTGAACGTTTGAATCATA 59.772 33.333 0.46 0.00 0.00 2.15
4153 4858 7.860373 CCTCTTGTTTGAACGTTTGAATCATAA 59.140 33.333 0.46 0.00 0.00 1.90
4154 4859 8.555166 TCTTGTTTGAACGTTTGAATCATAAC 57.445 30.769 0.46 4.22 0.00 1.89
4155 4860 8.402472 TCTTGTTTGAACGTTTGAATCATAACT 58.598 29.630 0.46 0.00 0.00 2.24
4156 4861 9.658475 CTTGTTTGAACGTTTGAATCATAACTA 57.342 29.630 0.46 0.63 0.00 2.24
4157 4862 9.658475 TTGTTTGAACGTTTGAATCATAACTAG 57.342 29.630 0.46 0.00 0.00 2.57
4158 4863 8.832521 TGTTTGAACGTTTGAATCATAACTAGT 58.167 29.630 0.46 0.00 0.00 2.57
4159 4864 9.314501 GTTTGAACGTTTGAATCATAACTAGTC 57.685 33.333 0.46 0.00 0.00 2.59
4160 4865 7.591006 TGAACGTTTGAATCATAACTAGTCC 57.409 36.000 0.46 0.00 0.00 3.85
4161 4866 6.309494 TGAACGTTTGAATCATAACTAGTCCG 59.691 38.462 0.46 0.00 0.00 4.79
4162 4867 5.717119 ACGTTTGAATCATAACTAGTCCGT 58.283 37.500 0.00 0.00 0.00 4.69
4163 4868 5.803967 ACGTTTGAATCATAACTAGTCCGTC 59.196 40.000 0.00 0.00 0.00 4.79
4164 4869 5.231568 CGTTTGAATCATAACTAGTCCGTCC 59.768 44.000 0.00 0.00 0.00 4.79
4165 4870 6.338937 GTTTGAATCATAACTAGTCCGTCCT 58.661 40.000 0.00 0.00 0.00 3.85
4166 4871 6.540438 TTGAATCATAACTAGTCCGTCCTT 57.460 37.500 0.00 0.00 0.00 3.36
4167 4872 6.540438 TGAATCATAACTAGTCCGTCCTTT 57.460 37.500 0.00 0.00 0.00 3.11
4168 4873 6.942976 TGAATCATAACTAGTCCGTCCTTTT 58.057 36.000 0.00 0.00 0.00 2.27
4169 4874 8.070034 TGAATCATAACTAGTCCGTCCTTTTA 57.930 34.615 0.00 0.00 0.00 1.52
4170 4875 8.195436 TGAATCATAACTAGTCCGTCCTTTTAG 58.805 37.037 0.00 0.00 0.00 1.85
4171 4876 7.657023 ATCATAACTAGTCCGTCCTTTTAGT 57.343 36.000 0.00 0.00 0.00 2.24
4172 4877 8.757982 ATCATAACTAGTCCGTCCTTTTAGTA 57.242 34.615 0.00 0.00 0.00 1.82
4173 4878 8.579850 TCATAACTAGTCCGTCCTTTTAGTAA 57.420 34.615 0.00 0.00 0.00 2.24
4174 4879 9.023962 TCATAACTAGTCCGTCCTTTTAGTAAA 57.976 33.333 0.00 0.00 0.00 2.01
4175 4880 9.813446 CATAACTAGTCCGTCCTTTTAGTAAAT 57.187 33.333 0.00 0.00 0.00 1.40
4182 4887 7.919621 AGTCCGTCCTTTTAGTAAATTATCTCG 59.080 37.037 0.00 0.00 0.00 4.04
4183 4888 7.704047 GTCCGTCCTTTTAGTAAATTATCTCGT 59.296 37.037 0.00 0.00 0.00 4.18
4184 4889 7.917505 TCCGTCCTTTTAGTAAATTATCTCGTC 59.082 37.037 0.00 0.00 0.00 4.20
4185 4890 7.096722 CCGTCCTTTTAGTAAATTATCTCGTCG 60.097 40.741 0.00 0.00 0.00 5.12
4186 4891 7.641411 CGTCCTTTTAGTAAATTATCTCGTCGA 59.359 37.037 0.00 0.00 0.00 4.20
4187 4892 8.956014 GTCCTTTTAGTAAATTATCTCGTCGAG 58.044 37.037 16.33 16.33 0.00 4.04
4188 4893 7.646922 TCCTTTTAGTAAATTATCTCGTCGAGC 59.353 37.037 17.61 0.87 0.00 5.03
4189 4894 7.434307 CCTTTTAGTAAATTATCTCGTCGAGCA 59.566 37.037 17.61 7.08 0.00 4.26
4190 4895 8.692110 TTTTAGTAAATTATCTCGTCGAGCAA 57.308 30.769 17.61 13.42 0.00 3.91
4191 4896 8.867112 TTTAGTAAATTATCTCGTCGAGCAAT 57.133 30.769 17.61 14.97 0.00 3.56
4192 4897 9.955208 TTTAGTAAATTATCTCGTCGAGCAATA 57.045 29.630 17.61 8.32 0.00 1.90
4193 4898 9.955208 TTAGTAAATTATCTCGTCGAGCAATAA 57.045 29.630 17.61 16.06 0.00 1.40
4194 4899 8.283340 AGTAAATTATCTCGTCGAGCAATAAC 57.717 34.615 17.61 17.00 0.00 1.89
4195 4900 7.919091 AGTAAATTATCTCGTCGAGCAATAACA 59.081 33.333 17.61 0.00 0.00 2.41
4196 4901 7.715265 AAATTATCTCGTCGAGCAATAACAT 57.285 32.000 17.61 6.49 0.00 2.71
6558 7713 2.613691 CAAAGCATGGCAGCCTAAAAG 58.386 47.619 14.15 0.00 34.23 2.27
6571 7726 3.847184 AGCCTAAAAGCCCTAGACTCTTT 59.153 43.478 0.00 0.00 0.00 2.52
6572 7727 4.289934 AGCCTAAAAGCCCTAGACTCTTTT 59.710 41.667 15.63 15.63 41.32 2.27
6573 7728 5.010933 GCCTAAAAGCCCTAGACTCTTTTT 58.989 41.667 16.18 8.01 39.72 1.94
6574 7729 5.124138 GCCTAAAAGCCCTAGACTCTTTTTC 59.876 44.000 16.18 7.64 39.72 2.29
6575 7730 6.477253 CCTAAAAGCCCTAGACTCTTTTTCT 58.523 40.000 16.18 0.00 39.72 2.52
6606 7761 1.593265 CACCTTTGCCCTGCCAATC 59.407 57.895 0.00 0.00 0.00 2.67
6610 7765 1.553706 CTTTGCCCTGCCAATCTCTT 58.446 50.000 0.00 0.00 0.00 2.85
6616 7771 2.620585 GCCCTGCCAATCTCTTGTTATC 59.379 50.000 0.00 0.00 0.00 1.75
6626 7781 6.347483 CCAATCTCTTGTTATCGCATCATCAG 60.347 42.308 0.00 0.00 0.00 2.90
6708 7864 3.221771 CCTCATTCAACCAGTCCAACAA 58.778 45.455 0.00 0.00 0.00 2.83
6718 7874 4.023291 ACCAGTCCAACAAGTTCATGTTT 58.977 39.130 0.00 0.00 41.44 2.83
6724 7880 6.071391 AGTCCAACAAGTTCATGTTTTTCACT 60.071 34.615 0.00 0.00 41.44 3.41
6736 7892 4.058124 TGTTTTTCACTCATCCGTCTCAG 58.942 43.478 0.00 0.00 0.00 3.35
6739 7895 1.756430 TCACTCATCCGTCTCAGAGG 58.244 55.000 0.00 0.00 32.52 3.69
6805 7961 5.814705 CGCAAAGGAGAAGATTCAAGTAGAT 59.185 40.000 0.00 0.00 0.00 1.98
6823 7979 0.180406 ATAGTAGTTGCCGGGCTTGG 59.820 55.000 21.46 0.00 0.00 3.61
6843 7999 1.412710 GGGACGATCAAGGACATGCTA 59.587 52.381 0.00 0.00 0.00 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 8.929487 TCTTTATTTTTCAGGGTTGGTTTGTAT 58.071 29.630 0.00 0.00 0.00 2.29
40 41 1.132495 AGACACCCTAGGGACCTGTTT 60.132 52.381 35.38 19.77 38.96 2.83
56 58 0.976641 AAGGATTGAGGTGCGAGACA 59.023 50.000 0.00 0.00 0.00 3.41
101 103 3.054802 AGGAAGATTGCTAGAGTGGTTGG 60.055 47.826 0.00 0.00 0.00 3.77
112 114 0.392193 CTCACGGCAGGAAGATTGCT 60.392 55.000 0.00 0.00 41.27 3.91
117 119 0.173481 CGAATCTCACGGCAGGAAGA 59.827 55.000 0.00 0.00 0.00 2.87
123 125 2.202610 CGCTCGAATCTCACGGCA 60.203 61.111 0.00 0.00 0.00 5.69
124 126 1.516386 TTCGCTCGAATCTCACGGC 60.516 57.895 0.02 0.00 0.00 5.68
179 181 7.558444 ACTTGTGTTATCCTCCAAGTTTGTTTA 59.442 33.333 0.00 0.00 43.59 2.01
183 185 5.334105 CGACTTGTGTTATCCTCCAAGTTTG 60.334 44.000 5.47 0.00 45.43 2.93
184 186 4.755123 CGACTTGTGTTATCCTCCAAGTTT 59.245 41.667 5.47 0.00 45.43 2.66
188 190 2.037902 TGCGACTTGTGTTATCCTCCAA 59.962 45.455 0.00 0.00 0.00 3.53
190 192 2.094182 TCTGCGACTTGTGTTATCCTCC 60.094 50.000 0.00 0.00 0.00 4.30
201 203 3.904136 AGTTTTGGATTCTGCGACTTG 57.096 42.857 0.00 0.00 0.00 3.16
204 206 5.545658 TCATTAGTTTTGGATTCTGCGAC 57.454 39.130 0.00 0.00 0.00 5.19
205 207 5.879777 TCATCATTAGTTTTGGATTCTGCGA 59.120 36.000 0.00 0.00 0.00 5.10
206 208 5.967674 GTCATCATTAGTTTTGGATTCTGCG 59.032 40.000 0.00 0.00 0.00 5.18
207 209 5.967674 CGTCATCATTAGTTTTGGATTCTGC 59.032 40.000 0.00 0.00 0.00 4.26
208 210 7.307493 TCGTCATCATTAGTTTTGGATTCTG 57.693 36.000 0.00 0.00 0.00 3.02
209 211 9.046296 GTATCGTCATCATTAGTTTTGGATTCT 57.954 33.333 0.00 0.00 0.00 2.40
216 219 8.948631 ATCACAGTATCGTCATCATTAGTTTT 57.051 30.769 0.00 0.00 0.00 2.43
224 227 6.648879 TTCCATATCACAGTATCGTCATCA 57.351 37.500 0.00 0.00 0.00 3.07
311 317 4.087930 GTGCATTGCGTACACATACAAAAC 59.912 41.667 3.84 0.00 34.43 2.43
320 326 1.196581 TGTGATGTGCATTGCGTACAC 59.803 47.619 15.68 15.68 43.47 2.90
377 383 9.982291 GAGAAAAAGTTGTTGCGTGATATATTA 57.018 29.630 0.00 0.00 0.00 0.98
382 388 6.371809 AAGAGAAAAAGTTGTTGCGTGATA 57.628 33.333 0.00 0.00 0.00 2.15
383 389 4.900635 AGAGAAAAAGTTGTTGCGTGAT 57.099 36.364 0.00 0.00 0.00 3.06
391 397 8.336080 GTCAAATAGACGAAGAGAAAAAGTTGT 58.664 33.333 0.00 0.00 37.53 3.32
414 420 7.148340 CGTGTCTATGCTATGATAGATCAGTCA 60.148 40.741 3.13 0.00 40.64 3.41
415 421 7.186128 CGTGTCTATGCTATGATAGATCAGTC 58.814 42.308 3.13 0.00 40.64 3.51
440 446 0.674534 ACTCATCTAACCGGCGATCC 59.325 55.000 9.30 0.00 0.00 3.36
441 447 3.243301 TGTTACTCATCTAACCGGCGATC 60.243 47.826 9.30 0.00 0.00 3.69
446 452 2.190981 GCGTGTTACTCATCTAACCGG 58.809 52.381 0.00 0.00 0.00 5.28
472 478 3.106054 AGGCATGAGAGACTGTGAATCT 58.894 45.455 0.00 0.00 0.00 2.40
476 482 3.181451 ACAAAAGGCATGAGAGACTGTGA 60.181 43.478 0.00 0.00 0.00 3.58
520 530 8.407457 TGTCTATTTTCACACGAGATCATAAC 57.593 34.615 0.00 0.00 0.00 1.89
525 535 9.469807 AATCTATGTCTATTTTCACACGAGATC 57.530 33.333 0.00 0.00 31.69 2.75
528 538 7.340699 GCAATCTATGTCTATTTTCACACGAG 58.659 38.462 0.00 0.00 0.00 4.18
530 540 6.422223 GGCAATCTATGTCTATTTTCACACG 58.578 40.000 0.00 0.00 0.00 4.49
557 567 8.641541 ACACTTTGGACATAGACATGAAAAATT 58.358 29.630 0.00 0.00 35.96 1.82
563 573 5.482163 TCACACTTTGGACATAGACATGA 57.518 39.130 0.00 0.00 35.96 3.07
572 582 1.748493 GGTGCTTTCACACTTTGGACA 59.252 47.619 0.00 0.00 44.87 4.02
600 610 3.828694 TAACAACCGTGCCACCCCG 62.829 63.158 0.00 0.00 0.00 5.73
601 611 1.108132 TTTAACAACCGTGCCACCCC 61.108 55.000 0.00 0.00 0.00 4.95
602 612 0.031043 GTTTAACAACCGTGCCACCC 59.969 55.000 0.00 0.00 0.00 4.61
603 613 0.031043 GGTTTAACAACCGTGCCACC 59.969 55.000 0.00 0.00 43.40 4.61
604 614 3.555401 GGTTTAACAACCGTGCCAC 57.445 52.632 0.00 0.00 43.40 5.01
645 655 5.191426 ACGGAGAGCAGTTAGATAGTGTTA 58.809 41.667 0.00 0.00 0.00 2.41
647 657 3.622630 ACGGAGAGCAGTTAGATAGTGT 58.377 45.455 0.00 0.00 0.00 3.55
649 659 4.098196 GGAAACGGAGAGCAGTTAGATAGT 59.902 45.833 0.00 0.00 32.06 2.12
650 660 4.500035 GGGAAACGGAGAGCAGTTAGATAG 60.500 50.000 0.00 0.00 32.06 2.08
651 661 3.383825 GGGAAACGGAGAGCAGTTAGATA 59.616 47.826 0.00 0.00 32.06 1.98
659 669 2.920912 ACGGGGAAACGGAGAGCA 60.921 61.111 0.00 0.00 38.39 4.26
711 721 2.267642 CCGGCTTTCCACATCCGA 59.732 61.111 0.65 0.00 44.23 4.55
732 742 3.802418 CTTCCCGCGTATTCCCCCG 62.802 68.421 4.92 0.00 0.00 5.73
734 744 2.110420 CCTTCCCGCGTATTCCCC 59.890 66.667 4.92 0.00 0.00 4.81
784 805 1.148498 GGATACCAAAGCCTCCGGG 59.852 63.158 0.00 0.00 0.00 5.73
785 806 1.227556 CGGATACCAAAGCCTCCGG 60.228 63.158 0.00 0.00 45.30 5.14
786 807 4.438346 CGGATACCAAAGCCTCCG 57.562 61.111 0.00 0.00 43.98 4.63
787 808 1.095807 GCACGGATACCAAAGCCTCC 61.096 60.000 0.00 0.00 0.00 4.30
788 809 1.429148 CGCACGGATACCAAAGCCTC 61.429 60.000 0.00 0.00 0.00 4.70
816 837 0.454957 GTACGAGCACGCGAGGTTAA 60.455 55.000 15.93 0.00 43.96 2.01
852 873 4.116113 TCTCTCTTTCTCTCTCTACCCCT 58.884 47.826 0.00 0.00 0.00 4.79
1033 1079 2.792947 GCGTAGGAATCGGGAGGCA 61.793 63.158 0.00 0.00 0.00 4.75
1056 1102 3.256383 CCAGATGGCAGAGAGACAGATAG 59.744 52.174 0.00 0.00 39.86 2.08
1332 1409 1.755179 GACTAGTACTACCACCGCCA 58.245 55.000 0.00 0.00 0.00 5.69
1333 1410 0.659957 CGACTAGTACTACCACCGCC 59.340 60.000 0.00 0.00 0.00 6.13
1334 1411 1.373570 ACGACTAGTACTACCACCGC 58.626 55.000 0.00 0.00 0.00 5.68
1430 1511 0.037975 GTAAAAGTCTCCCGCGACCA 60.038 55.000 8.23 0.00 34.46 4.02
1676 1758 1.099295 ACCATCCACATGCATGCGAG 61.099 55.000 26.53 15.89 0.00 5.03
1713 1795 0.034477 CCCCTGCCGTCCTTACAAAT 60.034 55.000 0.00 0.00 0.00 2.32
1805 1895 0.464373 ACCATCTACTTGCGCCCATG 60.464 55.000 4.18 0.00 0.00 3.66
1922 2026 5.130477 TCTCTACAAAGGTTCAGAACTTGGT 59.870 40.000 13.13 10.02 35.21 3.67
1973 2077 0.827507 TTTGAGGCCCTTCTGCAACC 60.828 55.000 0.00 0.00 0.00 3.77
2009 2113 4.495844 GCTATACAAACTCGAAATGCACCC 60.496 45.833 0.00 0.00 0.00 4.61
2058 2162 0.035152 TTGCGACGGAGGGAGTAGTA 60.035 55.000 0.00 0.00 0.00 1.82
2059 2163 0.896940 TTTGCGACGGAGGGAGTAGT 60.897 55.000 0.00 0.00 0.00 2.73
2060 2164 0.245539 TTTTGCGACGGAGGGAGTAG 59.754 55.000 0.00 0.00 0.00 2.57
2061 2165 0.899720 ATTTTGCGACGGAGGGAGTA 59.100 50.000 0.00 0.00 0.00 2.59
2062 2166 0.036306 AATTTTGCGACGGAGGGAGT 59.964 50.000 0.00 0.00 0.00 3.85
2063 2167 0.727398 GAATTTTGCGACGGAGGGAG 59.273 55.000 0.00 0.00 0.00 4.30
2064 2168 0.323629 AGAATTTTGCGACGGAGGGA 59.676 50.000 0.00 0.00 0.00 4.20
2065 2169 1.135689 CAAGAATTTTGCGACGGAGGG 60.136 52.381 0.00 0.00 0.00 4.30
2066 2170 1.535462 ACAAGAATTTTGCGACGGAGG 59.465 47.619 0.00 0.00 0.00 4.30
2067 2171 2.480419 AGACAAGAATTTTGCGACGGAG 59.520 45.455 0.00 0.00 0.00 4.63
2068 2172 2.489971 AGACAAGAATTTTGCGACGGA 58.510 42.857 0.00 0.00 0.00 4.69
2069 2173 2.969443 AGACAAGAATTTTGCGACGG 57.031 45.000 0.00 0.00 0.00 4.79
2070 2174 5.264060 TCTAAGACAAGAATTTTGCGACG 57.736 39.130 0.00 0.00 0.00 5.12
2071 2175 6.462949 CGAATCTAAGACAAGAATTTTGCGAC 59.537 38.462 0.00 0.00 0.00 5.19
2072 2176 6.147164 ACGAATCTAAGACAAGAATTTTGCGA 59.853 34.615 0.00 0.00 0.00 5.10
2073 2177 6.307155 ACGAATCTAAGACAAGAATTTTGCG 58.693 36.000 0.00 0.00 0.00 4.85
2074 2178 7.522374 AGACGAATCTAAGACAAGAATTTTGC 58.478 34.615 0.00 0.00 31.46 3.68
2080 2184 9.499585 CGTATTTAGACGAATCTAAGACAAGAA 57.500 33.333 0.00 0.00 45.93 2.52
2081 2185 8.127327 CCGTATTTAGACGAATCTAAGACAAGA 58.873 37.037 0.00 0.00 45.93 3.02
2082 2186 8.127327 TCCGTATTTAGACGAATCTAAGACAAG 58.873 37.037 0.00 0.00 45.93 3.16
2083 2187 7.988737 TCCGTATTTAGACGAATCTAAGACAA 58.011 34.615 0.00 0.00 45.93 3.18
2084 2188 7.558161 TCCGTATTTAGACGAATCTAAGACA 57.442 36.000 0.00 0.00 45.93 3.41
2085 2189 8.074972 ACATCCGTATTTAGACGAATCTAAGAC 58.925 37.037 0.00 0.00 45.93 3.01
2086 2190 8.162878 ACATCCGTATTTAGACGAATCTAAGA 57.837 34.615 0.00 0.00 45.93 2.10
2089 2193 9.223099 TGATACATCCGTATTTAGACGAATCTA 57.777 33.333 0.00 0.00 45.82 1.98
2090 2194 8.107399 TGATACATCCGTATTTAGACGAATCT 57.893 34.615 0.00 0.00 45.82 2.40
2091 2195 8.738199 TTGATACATCCGTATTTAGACGAATC 57.262 34.615 0.00 0.00 45.82 2.52
2092 2196 8.358148 ACTTGATACATCCGTATTTAGACGAAT 58.642 33.333 0.00 0.00 45.82 3.34
2093 2197 7.709947 ACTTGATACATCCGTATTTAGACGAA 58.290 34.615 0.00 0.00 45.82 3.85
2094 2198 7.012610 TGACTTGATACATCCGTATTTAGACGA 59.987 37.037 0.00 0.00 45.82 4.20
2095 2199 7.113124 GTGACTTGATACATCCGTATTTAGACG 59.887 40.741 0.00 0.00 38.48 4.18
2096 2200 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
2097 2201 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
2098 2202 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
2099 2203 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
2100 2204 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
2101 2205 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
2102 2206 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
2103 2207 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
2104 2208 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
2105 2209 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
2106 2210 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
2113 2217 9.069078 CGAATCTAATACTAAAACGTGACTTGA 57.931 33.333 0.00 0.00 0.00 3.02
2114 2218 8.857216 ACGAATCTAATACTAAAACGTGACTTG 58.143 33.333 0.00 0.00 0.00 3.16
2115 2219 8.976986 ACGAATCTAATACTAAAACGTGACTT 57.023 30.769 0.00 0.00 0.00 3.01
2116 2220 8.457261 AGACGAATCTAATACTAAAACGTGACT 58.543 33.333 0.00 0.00 31.46 3.41
2117 2221 8.612233 AGACGAATCTAATACTAAAACGTGAC 57.388 34.615 0.00 0.00 31.46 3.67
2128 2232 8.796278 GCATCCGTATTTAGACGAATCTAATAC 58.204 37.037 0.00 0.00 44.99 1.89
2129 2233 8.517056 TGCATCCGTATTTAGACGAATCTAATA 58.483 33.333 0.00 0.00 44.99 0.98
2130 2234 7.375834 TGCATCCGTATTTAGACGAATCTAAT 58.624 34.615 0.00 0.00 44.99 1.73
2131 2235 6.741109 TGCATCCGTATTTAGACGAATCTAA 58.259 36.000 0.00 0.00 45.82 2.10
2132 2236 6.321848 TGCATCCGTATTTAGACGAATCTA 57.678 37.500 0.00 0.00 45.82 1.98
2133 2237 5.196341 TGCATCCGTATTTAGACGAATCT 57.804 39.130 0.00 0.00 45.82 2.40
2134 2238 5.864474 AGATGCATCCGTATTTAGACGAATC 59.136 40.000 23.06 0.00 45.82 2.52
2135 2239 5.784177 AGATGCATCCGTATTTAGACGAAT 58.216 37.500 23.06 0.00 45.82 3.34
2136 2240 5.196341 AGATGCATCCGTATTTAGACGAA 57.804 39.130 23.06 0.00 45.82 3.85
2137 2241 4.848562 AGATGCATCCGTATTTAGACGA 57.151 40.909 23.06 0.00 45.82 4.20
2138 2242 5.795939 GTCTAGATGCATCCGTATTTAGACG 59.204 44.000 24.24 3.94 39.99 4.18
2139 2243 6.678878 TGTCTAGATGCATCCGTATTTAGAC 58.321 40.000 28.04 28.04 44.89 2.59
2140 2244 6.894339 TGTCTAGATGCATCCGTATTTAGA 57.106 37.500 23.06 17.79 31.36 2.10
2141 2245 7.946655 TTTGTCTAGATGCATCCGTATTTAG 57.053 36.000 23.06 15.90 0.00 1.85
2142 2246 8.367911 AGATTTGTCTAGATGCATCCGTATTTA 58.632 33.333 23.06 6.97 0.00 1.40
2143 2247 7.220030 AGATTTGTCTAGATGCATCCGTATTT 58.780 34.615 23.06 6.10 0.00 1.40
2144 2248 6.763355 AGATTTGTCTAGATGCATCCGTATT 58.237 36.000 23.06 6.85 0.00 1.89
2145 2249 6.352016 AGATTTGTCTAGATGCATCCGTAT 57.648 37.500 23.06 7.24 0.00 3.06
2146 2250 5.791336 AGATTTGTCTAGATGCATCCGTA 57.209 39.130 23.06 9.13 0.00 4.02
2147 2251 4.679373 AGATTTGTCTAGATGCATCCGT 57.321 40.909 23.06 8.39 0.00 4.69
2148 2252 6.364706 GTCTTAGATTTGTCTAGATGCATCCG 59.635 42.308 23.06 14.43 0.00 4.18
2149 2253 7.212976 TGTCTTAGATTTGTCTAGATGCATCC 58.787 38.462 23.06 8.35 0.00 3.51
2150 2254 8.654230 TTGTCTTAGATTTGTCTAGATGCATC 57.346 34.615 19.37 19.37 0.00 3.91
2151 2255 8.481314 TCTTGTCTTAGATTTGTCTAGATGCAT 58.519 33.333 0.00 0.00 0.00 3.96
2152 2256 7.840931 TCTTGTCTTAGATTTGTCTAGATGCA 58.159 34.615 0.00 0.00 0.00 3.96
2153 2257 8.709386 TTCTTGTCTTAGATTTGTCTAGATGC 57.291 34.615 0.00 0.00 0.00 3.91
2159 2263 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
2160 2264 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
2161 2265 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
2162 2266 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
2163 2267 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
2164 2268 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
2165 2269 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
2166 2270 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
2167 2271 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
2168 2272 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2169 2273 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2170 2274 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2171 2275 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2172 2276 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2173 2277 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2174 2278 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2175 2279 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
2176 2280 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
2177 2281 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2178 2282 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2179 2283 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
2180 2284 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
2181 2285 3.339713 AATATACTCCCTCCGTCCCAA 57.660 47.619 0.00 0.00 0.00 4.12
2182 2286 3.339713 AAATATACTCCCTCCGTCCCA 57.660 47.619 0.00 0.00 0.00 4.37
2183 2287 4.701651 AAAAATATACTCCCTCCGTCCC 57.298 45.455 0.00 0.00 0.00 4.46
2184 2288 5.279859 CCCTAAAAATATACTCCCTCCGTCC 60.280 48.000 0.00 0.00 0.00 4.79
2185 2289 5.306419 ACCCTAAAAATATACTCCCTCCGTC 59.694 44.000 0.00 0.00 0.00 4.79
2186 2290 5.222086 ACCCTAAAAATATACTCCCTCCGT 58.778 41.667 0.00 0.00 0.00 4.69
2187 2291 5.820404 ACCCTAAAAATATACTCCCTCCG 57.180 43.478 0.00 0.00 0.00 4.63
2188 2292 6.268617 ACGTACCCTAAAAATATACTCCCTCC 59.731 42.308 0.00 0.00 0.00 4.30
2189 2293 7.295322 ACGTACCCTAAAAATATACTCCCTC 57.705 40.000 0.00 0.00 0.00 4.30
2190 2294 8.007153 ACTACGTACCCTAAAAATATACTCCCT 58.993 37.037 0.00 0.00 0.00 4.20
2191 2295 8.183104 ACTACGTACCCTAAAAATATACTCCC 57.817 38.462 0.00 0.00 0.00 4.30
2275 2512 1.458639 AAAAGCTGCTGCCACTGACC 61.459 55.000 12.44 0.00 40.80 4.02
2283 2528 1.372128 CCGAACCAAAAGCTGCTGC 60.372 57.895 1.35 7.62 40.05 5.25
2417 2663 5.886960 AGATTGCCAGTTGCTACTAAAAG 57.113 39.130 0.00 0.00 42.00 2.27
2442 2688 4.023365 GGAATAGCATGACAAATGAGAGGC 60.023 45.833 0.00 0.00 0.00 4.70
2443 2689 5.374921 AGGAATAGCATGACAAATGAGAGG 58.625 41.667 0.00 0.00 0.00 3.69
2585 2839 0.901827 TGCGCATCCAGAAGGTAGAA 59.098 50.000 5.66 0.00 35.89 2.10
2619 2873 2.286294 GCACCAGTAGATTTGAGATGCG 59.714 50.000 0.00 0.00 0.00 4.73
2699 2954 1.867363 TAGCTCCTGGAGGAAAGGAC 58.133 55.000 24.43 6.49 44.91 3.85
2852 3111 0.179089 CCCTTCCGAGATCAGCACAG 60.179 60.000 0.00 0.00 0.00 3.66
2999 3261 2.198827 TTGCTGGGTACTGATGGTTG 57.801 50.000 0.00 0.00 0.00 3.77
3014 3276 1.876156 CTCTTCCTTTGACGCTTTGCT 59.124 47.619 0.00 0.00 0.00 3.91
3017 3279 2.872858 GTCACTCTTCCTTTGACGCTTT 59.127 45.455 0.00 0.00 30.95 3.51
3020 3282 1.865865 TGTCACTCTTCCTTTGACGC 58.134 50.000 0.00 0.00 42.20 5.19
3098 3360 3.058224 GGCAGGACCGCACATTATTAATC 60.058 47.826 9.90 0.00 0.00 1.75
3262 3529 1.065551 GGCATGATAACCCGCAAGAAC 59.934 52.381 0.00 0.00 43.02 3.01
3510 3778 8.071368 CGTAATAAACAAACTAAGGCAGTGAAA 58.929 33.333 0.00 0.00 37.63 2.69
3590 4136 8.740123 TTTAACAGGATTCTTGTTAACAGACA 57.260 30.769 25.18 13.24 37.62 3.41
3999 4704 7.168804 CGAGATAATTTACTAAAAGGACGGACC 59.831 40.741 0.00 0.00 39.35 4.46
4040 4745 8.155821 TGGTAAACTTGATGATTCAAACGTTA 57.844 30.769 0.00 0.00 41.22 3.18
4041 4746 7.033530 TGGTAAACTTGATGATTCAAACGTT 57.966 32.000 0.00 0.00 41.22 3.99
4042 4747 6.262273 ACTGGTAAACTTGATGATTCAAACGT 59.738 34.615 0.00 0.00 41.22 3.99
4043 4748 6.668323 ACTGGTAAACTTGATGATTCAAACG 58.332 36.000 0.00 0.00 41.22 3.60
4044 4749 7.084486 GGACTGGTAAACTTGATGATTCAAAC 58.916 38.462 0.00 0.00 41.22 2.93
4045 4750 6.775142 TGGACTGGTAAACTTGATGATTCAAA 59.225 34.615 0.00 0.00 41.22 2.69
4046 4751 6.303054 TGGACTGGTAAACTTGATGATTCAA 58.697 36.000 0.00 0.00 39.54 2.69
4047 4752 5.875224 TGGACTGGTAAACTTGATGATTCA 58.125 37.500 0.00 0.00 0.00 2.57
4048 4753 7.552687 TGTATGGACTGGTAAACTTGATGATTC 59.447 37.037 0.00 0.00 0.00 2.52
4049 4754 7.402054 TGTATGGACTGGTAAACTTGATGATT 58.598 34.615 0.00 0.00 0.00 2.57
4050 4755 6.957631 TGTATGGACTGGTAAACTTGATGAT 58.042 36.000 0.00 0.00 0.00 2.45
4051 4756 6.367374 TGTATGGACTGGTAAACTTGATGA 57.633 37.500 0.00 0.00 0.00 2.92
4052 4757 7.630242 ATTGTATGGACTGGTAAACTTGATG 57.370 36.000 0.00 0.00 0.00 3.07
4053 4758 7.499232 GCTATTGTATGGACTGGTAAACTTGAT 59.501 37.037 0.00 0.00 0.00 2.57
4054 4759 6.821665 GCTATTGTATGGACTGGTAAACTTGA 59.178 38.462 0.00 0.00 0.00 3.02
4055 4760 6.597672 TGCTATTGTATGGACTGGTAAACTTG 59.402 38.462 0.00 0.00 0.00 3.16
4056 4761 6.717289 TGCTATTGTATGGACTGGTAAACTT 58.283 36.000 0.00 0.00 0.00 2.66
4057 4762 6.308015 TGCTATTGTATGGACTGGTAAACT 57.692 37.500 0.00 0.00 0.00 2.66
4058 4763 6.598064 AGTTGCTATTGTATGGACTGGTAAAC 59.402 38.462 0.00 0.00 0.00 2.01
4059 4764 6.717289 AGTTGCTATTGTATGGACTGGTAAA 58.283 36.000 0.00 0.00 0.00 2.01
4060 4765 6.156256 AGAGTTGCTATTGTATGGACTGGTAA 59.844 38.462 0.00 0.00 0.00 2.85
4061 4766 5.661312 AGAGTTGCTATTGTATGGACTGGTA 59.339 40.000 0.00 0.00 0.00 3.25
4062 4767 4.471386 AGAGTTGCTATTGTATGGACTGGT 59.529 41.667 0.00 0.00 0.00 4.00
4063 4768 5.028549 AGAGTTGCTATTGTATGGACTGG 57.971 43.478 0.00 0.00 0.00 4.00
4064 4769 7.981789 TCTTAAGAGTTGCTATTGTATGGACTG 59.018 37.037 0.00 0.00 0.00 3.51
4065 4770 8.079211 TCTTAAGAGTTGCTATTGTATGGACT 57.921 34.615 0.00 0.00 0.00 3.85
4066 4771 8.894768 ATCTTAAGAGTTGCTATTGTATGGAC 57.105 34.615 11.53 0.00 0.00 4.02
4067 4772 9.905713 AAATCTTAAGAGTTGCTATTGTATGGA 57.094 29.630 16.84 0.00 30.54 3.41
4072 4777 9.678260 ATCAGAAATCTTAAGAGTTGCTATTGT 57.322 29.630 21.90 0.00 32.01 2.71
4074 4779 9.336171 GGATCAGAAATCTTAAGAGTTGCTATT 57.664 33.333 21.90 9.60 32.01 1.73
4075 4780 8.489489 TGGATCAGAAATCTTAAGAGTTGCTAT 58.511 33.333 21.90 11.69 32.01 2.97
4076 4781 7.851228 TGGATCAGAAATCTTAAGAGTTGCTA 58.149 34.615 21.90 7.70 32.01 3.49
4077 4782 6.715280 TGGATCAGAAATCTTAAGAGTTGCT 58.285 36.000 21.90 14.96 32.01 3.91
4078 4783 6.992063 TGGATCAGAAATCTTAAGAGTTGC 57.008 37.500 21.90 13.20 32.01 4.17
4086 4791 8.677300 GCAGTGTAAAATGGATCAGAAATCTTA 58.323 33.333 0.00 0.00 0.00 2.10
4087 4792 7.363268 GGCAGTGTAAAATGGATCAGAAATCTT 60.363 37.037 0.00 0.00 0.00 2.40
4088 4793 6.096001 GGCAGTGTAAAATGGATCAGAAATCT 59.904 38.462 0.00 0.00 0.00 2.40
4089 4794 6.268566 GGCAGTGTAAAATGGATCAGAAATC 58.731 40.000 0.00 0.00 0.00 2.17
4090 4795 5.127682 GGGCAGTGTAAAATGGATCAGAAAT 59.872 40.000 0.00 0.00 0.00 2.17
4091 4796 4.462483 GGGCAGTGTAAAATGGATCAGAAA 59.538 41.667 0.00 0.00 0.00 2.52
4092 4797 4.016444 GGGCAGTGTAAAATGGATCAGAA 58.984 43.478 0.00 0.00 0.00 3.02
4093 4798 3.010027 TGGGCAGTGTAAAATGGATCAGA 59.990 43.478 0.00 0.00 0.00 3.27
4094 4799 3.355378 TGGGCAGTGTAAAATGGATCAG 58.645 45.455 0.00 0.00 0.00 2.90
4095 4800 3.448093 TGGGCAGTGTAAAATGGATCA 57.552 42.857 0.00 0.00 0.00 2.92
4096 4801 4.685924 CAATGGGCAGTGTAAAATGGATC 58.314 43.478 0.00 0.00 0.00 3.36
4097 4802 3.118665 GCAATGGGCAGTGTAAAATGGAT 60.119 43.478 0.00 0.00 43.97 3.41
4098 4803 2.233431 GCAATGGGCAGTGTAAAATGGA 59.767 45.455 0.00 0.00 43.97 3.41
4099 4804 2.620242 GCAATGGGCAGTGTAAAATGG 58.380 47.619 0.00 0.00 43.97 3.16
4111 4816 0.813821 GAGGAAACAGAGCAATGGGC 59.186 55.000 0.00 0.00 45.30 5.36
4112 4817 2.490903 CAAGAGGAAACAGAGCAATGGG 59.509 50.000 0.00 0.00 0.00 4.00
4113 4818 3.152341 ACAAGAGGAAACAGAGCAATGG 58.848 45.455 0.00 0.00 0.00 3.16
4114 4819 4.843220 AACAAGAGGAAACAGAGCAATG 57.157 40.909 0.00 0.00 0.00 2.82
4115 4820 4.889409 TCAAACAAGAGGAAACAGAGCAAT 59.111 37.500 0.00 0.00 0.00 3.56
4116 4821 4.269183 TCAAACAAGAGGAAACAGAGCAA 58.731 39.130 0.00 0.00 0.00 3.91
4117 4822 3.884895 TCAAACAAGAGGAAACAGAGCA 58.115 40.909 0.00 0.00 0.00 4.26
4118 4823 4.602006 GTTCAAACAAGAGGAAACAGAGC 58.398 43.478 0.00 0.00 0.00 4.09
4119 4824 4.332819 ACGTTCAAACAAGAGGAAACAGAG 59.667 41.667 0.00 0.00 0.00 3.35
4120 4825 4.258543 ACGTTCAAACAAGAGGAAACAGA 58.741 39.130 0.00 0.00 0.00 3.41
4121 4826 4.616181 ACGTTCAAACAAGAGGAAACAG 57.384 40.909 0.00 0.00 0.00 3.16
4122 4827 5.048643 TCAAACGTTCAAACAAGAGGAAACA 60.049 36.000 0.00 0.00 0.00 2.83
4123 4828 5.395642 TCAAACGTTCAAACAAGAGGAAAC 58.604 37.500 0.00 0.00 0.00 2.78
4124 4829 5.630661 TCAAACGTTCAAACAAGAGGAAA 57.369 34.783 0.00 0.00 0.00 3.13
4125 4830 5.630661 TTCAAACGTTCAAACAAGAGGAA 57.369 34.783 0.00 0.00 0.00 3.36
4126 4831 5.355630 TGATTCAAACGTTCAAACAAGAGGA 59.644 36.000 0.00 0.00 0.00 3.71
4127 4832 5.577835 TGATTCAAACGTTCAAACAAGAGG 58.422 37.500 0.00 0.00 0.00 3.69
4128 4833 8.682016 GTTATGATTCAAACGTTCAAACAAGAG 58.318 33.333 0.00 0.00 0.00 2.85
4129 4834 8.402472 AGTTATGATTCAAACGTTCAAACAAGA 58.598 29.630 0.00 0.00 0.00 3.02
4130 4835 8.560576 AGTTATGATTCAAACGTTCAAACAAG 57.439 30.769 0.00 0.00 0.00 3.16
4131 4836 9.658475 CTAGTTATGATTCAAACGTTCAAACAA 57.342 29.630 0.00 0.00 0.00 2.83
4132 4837 8.832521 ACTAGTTATGATTCAAACGTTCAAACA 58.167 29.630 0.00 3.33 0.00 2.83
4133 4838 9.314501 GACTAGTTATGATTCAAACGTTCAAAC 57.685 33.333 0.00 3.24 0.00 2.93
4134 4839 8.500773 GGACTAGTTATGATTCAAACGTTCAAA 58.499 33.333 0.00 0.00 0.00 2.69
4135 4840 7.148705 CGGACTAGTTATGATTCAAACGTTCAA 60.149 37.037 0.00 0.00 0.00 2.69
4136 4841 6.309494 CGGACTAGTTATGATTCAAACGTTCA 59.691 38.462 0.00 0.00 0.00 3.18
4137 4842 6.309737 ACGGACTAGTTATGATTCAAACGTTC 59.690 38.462 0.00 0.00 0.00 3.95
4138 4843 6.161381 ACGGACTAGTTATGATTCAAACGTT 58.839 36.000 0.00 0.00 0.00 3.99
4139 4844 5.717119 ACGGACTAGTTATGATTCAAACGT 58.283 37.500 0.00 0.00 0.00 3.99
4140 4845 5.231568 GGACGGACTAGTTATGATTCAAACG 59.768 44.000 0.00 0.00 0.00 3.60
4141 4846 6.338937 AGGACGGACTAGTTATGATTCAAAC 58.661 40.000 0.00 0.00 0.00 2.93
4142 4847 6.540438 AGGACGGACTAGTTATGATTCAAA 57.460 37.500 0.00 0.00 0.00 2.69
4143 4848 6.540438 AAGGACGGACTAGTTATGATTCAA 57.460 37.500 0.00 0.00 0.00 2.69
4144 4849 6.540438 AAAGGACGGACTAGTTATGATTCA 57.460 37.500 0.00 0.00 0.00 2.57
4145 4850 8.196103 ACTAAAAGGACGGACTAGTTATGATTC 58.804 37.037 0.00 0.00 0.00 2.52
4146 4851 8.075761 ACTAAAAGGACGGACTAGTTATGATT 57.924 34.615 0.00 0.00 0.00 2.57
4147 4852 7.657023 ACTAAAAGGACGGACTAGTTATGAT 57.343 36.000 0.00 0.00 0.00 2.45
4148 4853 8.579850 TTACTAAAAGGACGGACTAGTTATGA 57.420 34.615 0.00 0.00 0.00 2.15
4149 4854 9.813446 ATTTACTAAAAGGACGGACTAGTTATG 57.187 33.333 0.00 0.00 0.00 1.90
4156 4861 7.919621 CGAGATAATTTACTAAAAGGACGGACT 59.080 37.037 0.00 0.00 0.00 3.85
4157 4862 7.704047 ACGAGATAATTTACTAAAAGGACGGAC 59.296 37.037 0.00 0.00 0.00 4.79
4158 4863 7.775120 ACGAGATAATTTACTAAAAGGACGGA 58.225 34.615 0.00 0.00 0.00 4.69
4159 4864 7.096722 CGACGAGATAATTTACTAAAAGGACGG 60.097 40.741 0.00 0.00 0.00 4.79
4160 4865 7.641411 TCGACGAGATAATTTACTAAAAGGACG 59.359 37.037 0.00 0.00 0.00 4.79
4161 4866 8.847444 TCGACGAGATAATTTACTAAAAGGAC 57.153 34.615 0.00 0.00 0.00 3.85
4162 4867 7.646922 GCTCGACGAGATAATTTACTAAAAGGA 59.353 37.037 28.43 0.00 0.00 3.36
4163 4868 7.434307 TGCTCGACGAGATAATTTACTAAAAGG 59.566 37.037 28.43 0.00 0.00 3.11
4164 4869 8.336498 TGCTCGACGAGATAATTTACTAAAAG 57.664 34.615 28.43 0.00 0.00 2.27
4165 4870 8.692110 TTGCTCGACGAGATAATTTACTAAAA 57.308 30.769 28.43 0.00 0.00 1.52
4166 4871 8.867112 ATTGCTCGACGAGATAATTTACTAAA 57.133 30.769 28.43 4.91 0.00 1.85
4167 4872 9.955208 TTATTGCTCGACGAGATAATTTACTAA 57.045 29.630 28.43 13.77 0.00 2.24
4168 4873 9.390795 GTTATTGCTCGACGAGATAATTTACTA 57.609 33.333 28.43 9.20 0.00 1.82
4169 4874 7.919091 TGTTATTGCTCGACGAGATAATTTACT 59.081 33.333 28.43 9.20 0.00 2.24
4170 4875 8.057812 TGTTATTGCTCGACGAGATAATTTAC 57.942 34.615 28.43 22.32 0.00 2.01
4171 4876 8.699749 CATGTTATTGCTCGACGAGATAATTTA 58.300 33.333 28.43 14.42 0.00 1.40
4172 4877 7.438160 TCATGTTATTGCTCGACGAGATAATTT 59.562 33.333 28.43 11.84 0.00 1.82
4173 4878 6.923508 TCATGTTATTGCTCGACGAGATAATT 59.076 34.615 28.43 12.13 0.00 1.40
4174 4879 6.363626 GTCATGTTATTGCTCGACGAGATAAT 59.636 38.462 28.43 24.89 0.00 1.28
4175 4880 5.685954 GTCATGTTATTGCTCGACGAGATAA 59.314 40.000 28.43 20.54 0.00 1.75
4176 4881 5.008712 AGTCATGTTATTGCTCGACGAGATA 59.991 40.000 28.43 14.65 0.00 1.98
4177 4882 4.045104 GTCATGTTATTGCTCGACGAGAT 58.955 43.478 28.43 15.67 0.00 2.75
4178 4883 3.128764 AGTCATGTTATTGCTCGACGAGA 59.871 43.478 28.43 8.96 0.00 4.04
4179 4884 3.241553 CAGTCATGTTATTGCTCGACGAG 59.758 47.826 20.56 20.56 0.00 4.18
4180 4885 3.179048 CAGTCATGTTATTGCTCGACGA 58.821 45.455 0.00 0.00 0.00 4.20
4181 4886 2.923655 ACAGTCATGTTATTGCTCGACG 59.076 45.455 0.00 0.00 35.63 5.12
4193 4898 7.995289 TGAACAAGAACATTAAACAGTCATGT 58.005 30.769 0.00 0.00 43.15 3.21
4194 4899 7.592533 CCTGAACAAGAACATTAAACAGTCATG 59.407 37.037 0.00 0.00 0.00 3.07
4195 4900 7.285401 ACCTGAACAAGAACATTAAACAGTCAT 59.715 33.333 0.00 0.00 0.00 3.06
4196 4901 6.601613 ACCTGAACAAGAACATTAAACAGTCA 59.398 34.615 0.00 0.00 0.00 3.41
6344 7102 5.689383 AGCAAAGTAATCGAAAGCAAAGA 57.311 34.783 0.00 0.00 0.00 2.52
6527 7668 1.604593 ATGCTTTGGCGTTGAGGCT 60.605 52.632 0.00 0.00 46.88 4.58
6558 7713 4.810191 TCTCAGAAAAAGAGTCTAGGGC 57.190 45.455 0.00 0.00 34.73 5.19
6571 7726 1.502231 GTGCTGCGAGTTCTCAGAAA 58.498 50.000 3.44 0.00 30.67 2.52
6572 7727 0.319900 GGTGCTGCGAGTTCTCAGAA 60.320 55.000 3.44 0.00 30.67 3.02
6573 7728 1.181741 AGGTGCTGCGAGTTCTCAGA 61.182 55.000 3.44 0.00 30.67 3.27
6574 7729 0.320247 AAGGTGCTGCGAGTTCTCAG 60.320 55.000 0.00 0.00 0.00 3.35
6575 7730 0.106708 AAAGGTGCTGCGAGTTCTCA 59.893 50.000 0.00 0.00 0.00 3.27
6606 7761 4.056740 AGCTGATGATGCGATAACAAGAG 58.943 43.478 0.00 0.00 35.28 2.85
6610 7765 2.486918 CCAGCTGATGATGCGATAACA 58.513 47.619 17.39 0.00 35.28 2.41
6616 7771 1.600957 CTTTACCCAGCTGATGATGCG 59.399 52.381 17.39 0.00 35.28 4.73
6626 7781 3.057526 AGAATGTTTTCGCTTTACCCAGC 60.058 43.478 0.00 0.00 36.93 4.85
6708 7864 4.821805 ACGGATGAGTGAAAAACATGAACT 59.178 37.500 0.00 0.00 0.00 3.01
6718 7874 2.493675 CCTCTGAGACGGATGAGTGAAA 59.506 50.000 6.17 0.00 0.00 2.69
6724 7880 0.614697 TTGGCCTCTGAGACGGATGA 60.615 55.000 3.32 0.00 0.00 2.92
6736 7892 2.158696 AGCAATGTATCCTCTTGGCCTC 60.159 50.000 3.32 0.00 0.00 4.70
6739 7895 1.336125 GCAGCAATGTATCCTCTTGGC 59.664 52.381 0.00 0.00 0.00 4.52
6805 7961 1.600107 CCAAGCCCGGCAACTACTA 59.400 57.895 13.15 0.00 0.00 1.82
6823 7979 0.179000 AGCATGTCCTTGATCGTCCC 59.821 55.000 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.