Multiple sequence alignment - TraesCS6B01G150100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G150100 chr6B 100.000 2516 0 0 1 2516 151151353 151148838 0.000000e+00 4647.0
1 TraesCS6B01G150100 chr6B 78.330 886 143 30 5 877 151299564 151298715 6.160000e-146 527.0
2 TraesCS6B01G150100 chr6B 81.729 613 97 11 260 861 151382545 151383153 4.830000e-137 497.0
3 TraesCS6B01G150100 chr6B 85.880 432 52 3 2070 2492 151298129 151297698 3.820000e-123 451.0
4 TraesCS6B01G150100 chr6B 86.957 391 51 0 2070 2460 151383775 151384165 8.260000e-120 440.0
5 TraesCS6B01G150100 chr6B 82.838 437 47 17 1551 1965 151298597 151298167 1.420000e-97 366.0
6 TraesCS6B01G150100 chr6B 80.903 487 48 24 1556 2005 151383308 151383786 2.400000e-90 342.0
7 TraesCS6B01G150100 chr6D 94.544 1063 43 7 1 1062 78304212 78303164 0.000000e+00 1628.0
8 TraesCS6B01G150100 chr6D 96.491 969 34 0 1548 2516 78303184 78302216 0.000000e+00 1602.0
9 TraesCS6B01G150100 chr6D 78.475 892 138 35 5 876 78540938 78540081 3.680000e-148 534.0
10 TraesCS6B01G150100 chr6D 87.811 402 49 0 2091 2492 78539466 78539065 2.930000e-129 472.0
11 TraesCS6B01G150100 chr6D 86.779 416 53 2 2070 2484 78764182 78764596 1.760000e-126 462.0
12 TraesCS6B01G150100 chr6D 81.240 597 89 16 274 861 78762982 78763564 6.340000e-126 460.0
13 TraesCS6B01G150100 chr6D 82.774 447 40 18 1551 1965 78539963 78539522 5.110000e-97 364.0
14 TraesCS6B01G150100 chr6D 80.448 491 47 25 1552 2005 78763715 78764193 1.870000e-86 329.0
15 TraesCS6B01G150100 chr6D 74.359 312 52 21 422 718 78356605 78356307 9.520000e-20 108.0
16 TraesCS6B01G150100 chr6A 93.233 1064 40 14 1 1062 93892095 93891062 0.000000e+00 1537.0
17 TraesCS6B01G150100 chr6A 92.518 989 51 6 1548 2516 93891082 93890097 0.000000e+00 1395.0
18 TraesCS6B01G150100 chr6A 81.435 641 98 19 247 877 94199163 94198534 2.890000e-139 505.0
19 TraesCS6B01G150100 chr6A 87.811 402 49 0 2091 2492 94197912 94197511 2.930000e-129 472.0
20 TraesCS6B01G150100 chr6A 86.957 391 51 0 2070 2460 94239211 94239601 8.260000e-120 440.0
21 TraesCS6B01G150100 chr6A 83.218 435 46 13 1554 1965 94198398 94197968 8.500000e-100 374.0
22 TraesCS6B01G150100 chr6A 82.151 437 51 14 1552 1965 94238745 94239177 1.430000e-92 350.0
23 TraesCS6B01G150100 chr6A 85.507 207 28 2 656 861 94238432 94238637 5.450000e-52 215.0
24 TraesCS6B01G150100 chr7B 98.785 494 6 0 1055 1548 658031941 658032434 0.000000e+00 880.0
25 TraesCS6B01G150100 chr7B 97.222 36 1 0 2029 2064 720314212 720314247 7.510000e-06 62.1
26 TraesCS6B01G150100 chr5B 98.780 492 6 0 1058 1549 537595913 537595422 0.000000e+00 876.0
27 TraesCS6B01G150100 chr5B 98.374 492 8 0 1058 1549 509472285 509471794 0.000000e+00 865.0
28 TraesCS6B01G150100 chr5B 97.773 494 11 0 1055 1548 332424808 332425301 0.000000e+00 852.0
29 TraesCS6B01G150100 chr1B 98.583 494 7 0 1055 1548 3262954 3263447 0.000000e+00 874.0
30 TraesCS6B01G150100 chr1B 98.580 493 7 0 1055 1547 133432460 133432952 0.000000e+00 872.0
31 TraesCS6B01G150100 chr4A 98.185 496 9 0 1055 1550 668948372 668948867 0.000000e+00 867.0
32 TraesCS6B01G150100 chr4A 98.182 495 9 0 1055 1549 714740463 714740957 0.000000e+00 865.0
33 TraesCS6B01G150100 chrUn 97.778 495 11 0 1055 1549 321392326 321392820 0.000000e+00 854.0
34 TraesCS6B01G150100 chr4B 90.909 55 5 0 2160 2214 94208671 94208617 9.650000e-10 75.0
35 TraesCS6B01G150100 chr7A 93.478 46 2 1 2013 2058 36890126 36890170 1.620000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G150100 chr6B 151148838 151151353 2515 True 4647.000000 4647 100.000000 1 2516 1 chr6B.!!$R1 2515
1 TraesCS6B01G150100 chr6B 151297698 151299564 1866 True 448.000000 527 82.349333 5 2492 3 chr6B.!!$R2 2487
2 TraesCS6B01G150100 chr6B 151382545 151384165 1620 False 426.333333 497 83.196333 260 2460 3 chr6B.!!$F1 2200
3 TraesCS6B01G150100 chr6D 78302216 78304212 1996 True 1615.000000 1628 95.517500 1 2516 2 chr6D.!!$R2 2515
4 TraesCS6B01G150100 chr6D 78539065 78540938 1873 True 456.666667 534 83.020000 5 2492 3 chr6D.!!$R3 2487
5 TraesCS6B01G150100 chr6D 78762982 78764596 1614 False 417.000000 462 82.822333 274 2484 3 chr6D.!!$F1 2210
6 TraesCS6B01G150100 chr6A 93890097 93892095 1998 True 1466.000000 1537 92.875500 1 2516 2 chr6A.!!$R1 2515
7 TraesCS6B01G150100 chr6A 94197511 94199163 1652 True 450.333333 505 84.154667 247 2492 3 chr6A.!!$R2 2245
8 TraesCS6B01G150100 chr6A 94238432 94239601 1169 False 335.000000 440 84.871667 656 2460 3 chr6A.!!$F1 1804

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
606 626 1.079503 GTGGCCATCTGTTTCTCGAC 58.920 55.0 9.72 0.0 0.0 4.20 F
1316 1350 0.105039 CCTACCCTTGACAGATCGCC 59.895 60.0 0.00 0.0 0.0 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1436 1470 0.036306 CCAAACTGTAGTTCGGCCCT 59.964 55.000 0.0 0.0 37.25 5.19 R
2248 2348 3.371063 ACTCGCCGACGTGGACAT 61.371 61.111 0.0 0.0 42.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
140 141 4.943705 GGAAAAGGTAATGCAGACAGATGA 59.056 41.667 0.00 0.00 0.00 2.92
209 210 2.095567 GGAGCATTGCACACTGTTGTAG 60.096 50.000 11.91 0.00 33.30 2.74
245 257 9.987272 CCTTTTTCCAGAAAAACTATTTCTCAT 57.013 29.630 12.99 0.00 43.08 2.90
266 278 8.971321 TCTCATCTTTAACTACGTTTTGTGTAC 58.029 33.333 0.00 0.00 0.00 2.90
336 348 6.796705 TTACTTGAGAACCGAGAATTTTCC 57.203 37.500 0.00 0.00 0.00 3.13
393 405 3.521796 GAGATTGGCAAGGGCGGC 61.522 66.667 5.96 0.00 42.47 6.53
530 545 8.699749 GGAAATTCAGTTTGTAGTTTTATGTGC 58.300 33.333 0.00 0.00 0.00 4.57
549 564 3.608073 GTGCCGCAACTCAAATATTTGTC 59.392 43.478 23.95 10.84 39.18 3.18
606 626 1.079503 GTGGCCATCTGTTTCTCGAC 58.920 55.000 9.72 0.00 0.00 4.20
614 635 5.006165 GCCATCTGTTTCTCGACTTTATGAG 59.994 44.000 0.00 0.00 0.00 2.90
867 894 4.815308 GGATCATCTGAGAGGTTGTTCATG 59.185 45.833 0.00 0.00 0.00 3.07
913 941 9.851686 ACACTTCATCTTGGCTATTCAAATATA 57.148 29.630 0.00 0.00 0.00 0.86
915 943 9.512588 ACTTCATCTTGGCTATTCAAATATAGG 57.487 33.333 0.00 0.00 0.00 2.57
1042 1076 6.313519 AGAACTGCATAGACCCTAAATCAA 57.686 37.500 0.00 0.00 0.00 2.57
1043 1077 6.352516 AGAACTGCATAGACCCTAAATCAAG 58.647 40.000 0.00 0.00 0.00 3.02
1056 1090 7.519927 ACCCTAAATCAAGTGTGGTTACTAAA 58.480 34.615 0.00 0.00 0.00 1.85
1058 1092 7.664318 CCCTAAATCAAGTGTGGTTACTAAACT 59.336 37.037 0.00 0.00 35.81 2.66
1059 1093 8.718734 CCTAAATCAAGTGTGGTTACTAAACTC 58.281 37.037 0.00 0.00 35.81 3.01
1060 1094 9.268268 CTAAATCAAGTGTGGTTACTAAACTCA 57.732 33.333 0.00 0.00 35.81 3.41
1061 1095 8.514330 AAATCAAGTGTGGTTACTAAACTCAA 57.486 30.769 0.00 0.00 35.81 3.02
1062 1096 8.691661 AATCAAGTGTGGTTACTAAACTCAAT 57.308 30.769 0.00 0.00 35.81 2.57
1063 1097 7.490962 TCAAGTGTGGTTACTAAACTCAATG 57.509 36.000 0.00 0.00 35.81 2.82
1064 1098 7.051623 TCAAGTGTGGTTACTAAACTCAATGT 58.948 34.615 0.00 0.00 35.81 2.71
1065 1099 7.554835 TCAAGTGTGGTTACTAAACTCAATGTT 59.445 33.333 0.00 0.00 41.29 2.71
1066 1100 7.259290 AGTGTGGTTACTAAACTCAATGTTG 57.741 36.000 0.00 0.00 39.13 3.33
1067 1101 7.051623 AGTGTGGTTACTAAACTCAATGTTGA 58.948 34.615 0.00 0.00 39.13 3.18
1068 1102 7.719633 AGTGTGGTTACTAAACTCAATGTTGAT 59.280 33.333 0.00 0.00 39.13 2.57
1069 1103 7.803189 GTGTGGTTACTAAACTCAATGTTGATG 59.197 37.037 0.00 0.00 39.13 3.07
1070 1104 7.040755 TGTGGTTACTAAACTCAATGTTGATGG 60.041 37.037 0.00 0.00 39.13 3.51
1071 1105 6.432783 TGGTTACTAAACTCAATGTTGATGGG 59.567 38.462 0.00 0.00 39.13 4.00
1072 1106 6.433093 GGTTACTAAACTCAATGTTGATGGGT 59.567 38.462 0.00 0.00 39.13 4.51
1073 1107 7.361799 GGTTACTAAACTCAATGTTGATGGGTC 60.362 40.741 0.00 0.00 39.13 4.46
1074 1108 4.695455 ACTAAACTCAATGTTGATGGGTCG 59.305 41.667 0.00 0.00 39.13 4.79
1075 1109 2.859165 ACTCAATGTTGATGGGTCGT 57.141 45.000 0.00 0.00 36.46 4.34
1076 1110 3.140325 ACTCAATGTTGATGGGTCGTT 57.860 42.857 0.00 0.00 36.46 3.85
1077 1111 3.074412 ACTCAATGTTGATGGGTCGTTC 58.926 45.455 0.00 0.00 36.46 3.95
1078 1112 2.073056 TCAATGTTGATGGGTCGTTCG 58.927 47.619 0.00 0.00 31.01 3.95
1079 1113 1.804151 CAATGTTGATGGGTCGTTCGT 59.196 47.619 0.00 0.00 0.00 3.85
1080 1114 2.178912 ATGTTGATGGGTCGTTCGTT 57.821 45.000 0.00 0.00 0.00 3.85
1081 1115 1.504359 TGTTGATGGGTCGTTCGTTC 58.496 50.000 0.00 0.00 0.00 3.95
1082 1116 1.202545 TGTTGATGGGTCGTTCGTTCA 60.203 47.619 0.00 0.00 0.00 3.18
1083 1117 2.073816 GTTGATGGGTCGTTCGTTCAT 58.926 47.619 0.00 0.00 0.00 2.57
1084 1118 3.255725 GTTGATGGGTCGTTCGTTCATA 58.744 45.455 0.00 0.00 0.00 2.15
1085 1119 2.883574 TGATGGGTCGTTCGTTCATAC 58.116 47.619 0.00 0.00 0.00 2.39
1086 1120 2.199236 GATGGGTCGTTCGTTCATACC 58.801 52.381 0.00 0.00 0.00 2.73
1087 1121 0.109179 TGGGTCGTTCGTTCATACCG 60.109 55.000 0.00 0.00 0.00 4.02
1088 1122 0.171007 GGGTCGTTCGTTCATACCGA 59.829 55.000 0.00 0.00 0.00 4.69
1089 1123 1.202336 GGGTCGTTCGTTCATACCGAT 60.202 52.381 0.00 0.00 33.81 4.18
1090 1124 1.850441 GGTCGTTCGTTCATACCGATG 59.150 52.381 0.00 0.00 33.81 3.84
1091 1125 1.850441 GTCGTTCGTTCATACCGATGG 59.150 52.381 0.00 0.00 33.81 3.51
1092 1126 1.473677 TCGTTCGTTCATACCGATGGT 59.526 47.619 0.00 0.00 40.16 3.55
1093 1127 1.586578 CGTTCGTTCATACCGATGGTG 59.413 52.381 0.00 0.00 36.19 4.17
1094 1128 1.931172 GTTCGTTCATACCGATGGTGG 59.069 52.381 0.00 0.00 36.19 4.61
1095 1129 1.476477 TCGTTCATACCGATGGTGGA 58.524 50.000 0.00 0.00 36.19 4.02
1096 1130 2.036387 TCGTTCATACCGATGGTGGAT 58.964 47.619 0.00 0.00 36.19 3.41
1097 1131 2.432874 TCGTTCATACCGATGGTGGATT 59.567 45.455 0.00 0.00 36.19 3.01
1098 1132 3.637694 TCGTTCATACCGATGGTGGATTA 59.362 43.478 0.00 0.00 36.19 1.75
1099 1133 3.987868 CGTTCATACCGATGGTGGATTAG 59.012 47.826 0.00 0.00 36.19 1.73
1100 1134 3.678056 TCATACCGATGGTGGATTAGC 57.322 47.619 0.00 0.00 36.19 3.09
1101 1135 2.969262 TCATACCGATGGTGGATTAGCA 59.031 45.455 0.00 0.00 41.72 3.49
1102 1136 3.006859 TCATACCGATGGTGGATTAGCAG 59.993 47.826 0.00 0.00 40.65 4.24
1103 1137 0.469917 ACCGATGGTGGATTAGCAGG 59.530 55.000 0.00 0.00 40.65 4.85
1104 1138 0.758734 CCGATGGTGGATTAGCAGGA 59.241 55.000 0.00 0.00 40.65 3.86
1105 1139 1.270518 CCGATGGTGGATTAGCAGGAG 60.271 57.143 0.00 0.00 40.65 3.69
1106 1140 1.875576 CGATGGTGGATTAGCAGGAGC 60.876 57.143 0.00 0.00 40.65 4.70
1107 1141 0.475906 ATGGTGGATTAGCAGGAGCC 59.524 55.000 0.00 0.00 43.56 4.70
1108 1142 1.227674 GGTGGATTAGCAGGAGCCG 60.228 63.158 0.00 0.00 43.56 5.52
1109 1143 1.227674 GTGGATTAGCAGGAGCCGG 60.228 63.158 0.00 0.00 43.56 6.13
1110 1144 1.689233 TGGATTAGCAGGAGCCGGT 60.689 57.895 1.90 0.00 43.56 5.28
1111 1145 0.397957 TGGATTAGCAGGAGCCGGTA 60.398 55.000 1.90 0.00 43.56 4.02
1112 1146 0.977395 GGATTAGCAGGAGCCGGTAT 59.023 55.000 1.90 0.00 43.56 2.73
1113 1147 1.338200 GGATTAGCAGGAGCCGGTATG 60.338 57.143 1.90 0.00 43.56 2.39
1114 1148 1.618837 GATTAGCAGGAGCCGGTATGA 59.381 52.381 1.90 0.00 43.56 2.15
1115 1149 1.717032 TTAGCAGGAGCCGGTATGAT 58.283 50.000 1.90 0.00 43.56 2.45
1116 1150 1.257743 TAGCAGGAGCCGGTATGATC 58.742 55.000 1.90 0.00 43.56 2.92
1117 1151 0.470833 AGCAGGAGCCGGTATGATCT 60.471 55.000 1.90 0.00 43.56 2.75
1118 1152 0.394565 GCAGGAGCCGGTATGATCTT 59.605 55.000 1.90 0.00 33.58 2.40
1119 1153 1.618837 GCAGGAGCCGGTATGATCTTA 59.381 52.381 1.90 0.00 33.58 2.10
1120 1154 2.610727 GCAGGAGCCGGTATGATCTTAC 60.611 54.545 1.90 9.70 33.58 2.34
1121 1155 1.887198 AGGAGCCGGTATGATCTTACG 59.113 52.381 1.90 7.72 0.00 3.18
1122 1156 1.612463 GGAGCCGGTATGATCTTACGT 59.388 52.381 1.90 0.00 0.00 3.57
1123 1157 2.607282 GGAGCCGGTATGATCTTACGTG 60.607 54.545 1.90 7.40 0.00 4.49
1124 1158 2.292569 GAGCCGGTATGATCTTACGTGA 59.707 50.000 1.90 0.00 0.00 4.35
1125 1159 2.891580 AGCCGGTATGATCTTACGTGAT 59.108 45.455 1.90 0.00 0.00 3.06
1126 1160 4.077108 AGCCGGTATGATCTTACGTGATA 58.923 43.478 1.90 0.00 0.00 2.15
1127 1161 4.521639 AGCCGGTATGATCTTACGTGATAA 59.478 41.667 1.90 0.00 0.00 1.75
1128 1162 5.185249 AGCCGGTATGATCTTACGTGATAAT 59.815 40.000 1.90 0.00 0.00 1.28
1129 1163 5.288712 GCCGGTATGATCTTACGTGATAATG 59.711 44.000 1.90 0.00 0.00 1.90
1130 1164 6.617879 CCGGTATGATCTTACGTGATAATGA 58.382 40.000 11.45 0.00 0.00 2.57
1131 1165 6.527023 CCGGTATGATCTTACGTGATAATGAC 59.473 42.308 11.45 0.00 0.00 3.06
1132 1166 6.248629 CGGTATGATCTTACGTGATAATGACG 59.751 42.308 11.45 0.00 42.62 4.35
1133 1167 6.527023 GGTATGATCTTACGTGATAATGACGG 59.473 42.308 11.45 0.00 41.21 4.79
1134 1168 4.295870 TGATCTTACGTGATAATGACGGC 58.704 43.478 0.00 0.00 41.21 5.68
1135 1169 3.786516 TCTTACGTGATAATGACGGCA 57.213 42.857 0.00 0.00 41.21 5.69
1136 1170 4.112716 TCTTACGTGATAATGACGGCAA 57.887 40.909 0.00 0.00 41.21 4.52
1137 1171 3.861113 TCTTACGTGATAATGACGGCAAC 59.139 43.478 0.00 0.00 41.21 4.17
1138 1172 2.087501 ACGTGATAATGACGGCAACA 57.912 45.000 0.00 0.00 41.21 3.33
1139 1173 2.627945 ACGTGATAATGACGGCAACAT 58.372 42.857 0.00 0.00 41.21 2.71
1140 1174 3.006940 ACGTGATAATGACGGCAACATT 58.993 40.909 0.00 10.17 41.21 2.71
1141 1175 4.185394 ACGTGATAATGACGGCAACATTA 58.815 39.130 0.00 13.09 42.00 1.90
1142 1176 4.814234 ACGTGATAATGACGGCAACATTAT 59.186 37.500 19.04 19.04 46.64 1.28
1148 1182 5.741388 AATGACGGCAACATTATCTTCTC 57.259 39.130 0.00 0.00 36.40 2.87
1149 1183 4.471904 TGACGGCAACATTATCTTCTCT 57.528 40.909 0.00 0.00 0.00 3.10
1150 1184 4.183865 TGACGGCAACATTATCTTCTCTG 58.816 43.478 0.00 0.00 0.00 3.35
1151 1185 2.939103 ACGGCAACATTATCTTCTCTGC 59.061 45.455 0.00 0.00 0.00 4.26
1152 1186 3.201290 CGGCAACATTATCTTCTCTGCT 58.799 45.455 0.00 0.00 0.00 4.24
1153 1187 3.624861 CGGCAACATTATCTTCTCTGCTT 59.375 43.478 0.00 0.00 0.00 3.91
1154 1188 4.495349 CGGCAACATTATCTTCTCTGCTTG 60.495 45.833 0.00 0.00 0.00 4.01
1155 1189 4.397417 GGCAACATTATCTTCTCTGCTTGT 59.603 41.667 0.00 0.00 0.00 3.16
1156 1190 5.448360 GGCAACATTATCTTCTCTGCTTGTC 60.448 44.000 0.00 0.00 0.00 3.18
1157 1191 5.726138 GCAACATTATCTTCTCTGCTTGTCG 60.726 44.000 0.00 0.00 0.00 4.35
1158 1192 5.078411 ACATTATCTTCTCTGCTTGTCGT 57.922 39.130 0.00 0.00 0.00 4.34
1159 1193 5.482908 ACATTATCTTCTCTGCTTGTCGTT 58.517 37.500 0.00 0.00 0.00 3.85
1160 1194 6.631016 ACATTATCTTCTCTGCTTGTCGTTA 58.369 36.000 0.00 0.00 0.00 3.18
1161 1195 7.268586 ACATTATCTTCTCTGCTTGTCGTTAT 58.731 34.615 0.00 0.00 0.00 1.89
1162 1196 8.414003 ACATTATCTTCTCTGCTTGTCGTTATA 58.586 33.333 0.00 0.00 0.00 0.98
1163 1197 9.416794 CATTATCTTCTCTGCTTGTCGTTATAT 57.583 33.333 0.00 0.00 0.00 0.86
1164 1198 9.632807 ATTATCTTCTCTGCTTGTCGTTATATC 57.367 33.333 0.00 0.00 0.00 1.63
1165 1199 6.701145 TCTTCTCTGCTTGTCGTTATATCT 57.299 37.500 0.00 0.00 0.00 1.98
1166 1200 7.101652 TCTTCTCTGCTTGTCGTTATATCTT 57.898 36.000 0.00 0.00 0.00 2.40
1167 1201 6.975197 TCTTCTCTGCTTGTCGTTATATCTTG 59.025 38.462 0.00 0.00 0.00 3.02
1168 1202 5.043903 TCTCTGCTTGTCGTTATATCTTGC 58.956 41.667 0.00 0.00 0.00 4.01
1169 1203 4.754322 TCTGCTTGTCGTTATATCTTGCA 58.246 39.130 0.00 0.00 0.00 4.08
1170 1204 5.359756 TCTGCTTGTCGTTATATCTTGCAT 58.640 37.500 0.00 0.00 0.00 3.96
1171 1205 5.817296 TCTGCTTGTCGTTATATCTTGCATT 59.183 36.000 0.00 0.00 0.00 3.56
1172 1206 5.809464 TGCTTGTCGTTATATCTTGCATTG 58.191 37.500 0.00 0.00 0.00 2.82
1173 1207 5.353956 TGCTTGTCGTTATATCTTGCATTGT 59.646 36.000 0.00 0.00 0.00 2.71
1174 1208 6.128035 TGCTTGTCGTTATATCTTGCATTGTT 60.128 34.615 0.00 0.00 0.00 2.83
1175 1209 6.412072 GCTTGTCGTTATATCTTGCATTGTTC 59.588 38.462 0.00 0.00 0.00 3.18
1176 1210 6.358118 TGTCGTTATATCTTGCATTGTTCC 57.642 37.500 0.00 0.00 0.00 3.62
1177 1211 5.006261 TGTCGTTATATCTTGCATTGTTCCG 59.994 40.000 0.00 0.00 0.00 4.30
1178 1212 4.509970 TCGTTATATCTTGCATTGTTCCGG 59.490 41.667 0.00 0.00 0.00 5.14
1179 1213 4.509970 CGTTATATCTTGCATTGTTCCGGA 59.490 41.667 0.00 0.00 0.00 5.14
1180 1214 5.558273 CGTTATATCTTGCATTGTTCCGGAC 60.558 44.000 1.83 0.00 0.00 4.79
1181 1215 1.463674 ATCTTGCATTGTTCCGGACC 58.536 50.000 1.83 0.00 0.00 4.46
1182 1216 0.953471 TCTTGCATTGTTCCGGACCG 60.953 55.000 1.83 6.99 0.00 4.79
1183 1217 2.527547 CTTGCATTGTTCCGGACCGC 62.528 60.000 1.83 2.91 0.00 5.68
1184 1218 2.746277 GCATTGTTCCGGACCGCT 60.746 61.111 1.83 0.00 0.00 5.52
1185 1219 2.750888 GCATTGTTCCGGACCGCTC 61.751 63.158 1.83 1.21 0.00 5.03
1186 1220 2.106683 CATTGTTCCGGACCGCTCC 61.107 63.158 1.83 0.00 0.00 4.70
1187 1221 2.589157 ATTGTTCCGGACCGCTCCA 61.589 57.895 1.83 0.56 36.12 3.86
1188 1222 2.521958 ATTGTTCCGGACCGCTCCAG 62.522 60.000 1.83 0.00 36.12 3.86
1189 1223 4.452733 GTTCCGGACCGCTCCAGG 62.453 72.222 1.83 0.00 36.12 4.45
1194 1228 4.154347 GGACCGCTCCAGGCTGAG 62.154 72.222 17.94 12.44 39.13 3.35
1200 1234 4.298009 CTCCAGGCTGAGCTGTTG 57.702 61.111 17.94 0.69 0.00 3.33
1201 1235 1.376942 CTCCAGGCTGAGCTGTTGG 60.377 63.158 17.94 10.38 0.00 3.77
1202 1236 3.060615 CCAGGCTGAGCTGTTGGC 61.061 66.667 17.94 0.00 42.19 4.52
1203 1237 2.281970 CAGGCTGAGCTGTTGGCA 60.282 61.111 9.42 0.00 44.79 4.92
1204 1238 1.677966 CAGGCTGAGCTGTTGGCAT 60.678 57.895 9.42 0.00 44.79 4.40
1205 1239 1.677966 AGGCTGAGCTGTTGGCATG 60.678 57.895 3.72 0.00 44.79 4.06
1206 1240 1.975407 GGCTGAGCTGTTGGCATGT 60.975 57.895 3.72 0.00 44.79 3.21
1207 1241 1.505353 GCTGAGCTGTTGGCATGTC 59.495 57.895 0.00 0.00 44.79 3.06
1208 1242 1.239296 GCTGAGCTGTTGGCATGTCA 61.239 55.000 0.00 0.00 44.79 3.58
1209 1243 0.803117 CTGAGCTGTTGGCATGTCAG 59.197 55.000 0.00 9.45 44.79 3.51
1210 1244 0.607217 TGAGCTGTTGGCATGTCAGG 60.607 55.000 0.00 0.00 44.79 3.86
1211 1245 0.321919 GAGCTGTTGGCATGTCAGGA 60.322 55.000 0.00 0.00 44.79 3.86
1212 1246 0.322277 AGCTGTTGGCATGTCAGGAG 60.322 55.000 0.00 1.51 44.79 3.69
1213 1247 1.310933 GCTGTTGGCATGTCAGGAGG 61.311 60.000 0.00 0.00 41.35 4.30
1214 1248 0.679002 CTGTTGGCATGTCAGGAGGG 60.679 60.000 0.00 0.00 0.00 4.30
1215 1249 1.133181 TGTTGGCATGTCAGGAGGGA 61.133 55.000 0.00 0.00 0.00 4.20
1216 1250 0.257039 GTTGGCATGTCAGGAGGGAT 59.743 55.000 0.00 0.00 0.00 3.85
1217 1251 1.002069 TTGGCATGTCAGGAGGGATT 58.998 50.000 0.00 0.00 0.00 3.01
1218 1252 1.891933 TGGCATGTCAGGAGGGATTA 58.108 50.000 0.00 0.00 0.00 1.75
1219 1253 2.204463 TGGCATGTCAGGAGGGATTAA 58.796 47.619 0.00 0.00 0.00 1.40
1220 1254 2.173356 TGGCATGTCAGGAGGGATTAAG 59.827 50.000 0.00 0.00 0.00 1.85
1221 1255 2.225467 GCATGTCAGGAGGGATTAAGC 58.775 52.381 0.00 0.00 0.00 3.09
1222 1256 2.856222 CATGTCAGGAGGGATTAAGCC 58.144 52.381 0.00 0.00 0.00 4.35
1223 1257 2.270434 TGTCAGGAGGGATTAAGCCT 57.730 50.000 10.09 0.00 0.00 4.58
1224 1258 2.562296 TGTCAGGAGGGATTAAGCCTT 58.438 47.619 10.09 0.67 0.00 4.35
1225 1259 2.239654 TGTCAGGAGGGATTAAGCCTTG 59.760 50.000 10.09 4.03 0.00 3.61
1226 1260 1.212935 TCAGGAGGGATTAAGCCTTGC 59.787 52.381 10.09 7.58 0.00 4.01
1227 1261 1.213926 CAGGAGGGATTAAGCCTTGCT 59.786 52.381 10.18 10.18 42.56 3.91
1228 1262 1.492599 AGGAGGGATTAAGCCTTGCTC 59.507 52.381 10.18 7.89 38.25 4.26
1229 1263 1.492599 GGAGGGATTAAGCCTTGCTCT 59.507 52.381 10.09 0.00 38.25 4.09
1230 1264 2.706190 GGAGGGATTAAGCCTTGCTCTA 59.294 50.000 10.09 0.00 38.25 2.43
1231 1265 3.495276 GGAGGGATTAAGCCTTGCTCTAC 60.495 52.174 10.09 0.00 38.25 2.59
1232 1266 3.115390 AGGGATTAAGCCTTGCTCTACA 58.885 45.455 10.09 0.00 38.25 2.74
1233 1267 3.523564 AGGGATTAAGCCTTGCTCTACAA 59.476 43.478 10.09 0.00 38.25 2.41
1234 1268 4.166919 AGGGATTAAGCCTTGCTCTACAAT 59.833 41.667 10.09 0.00 38.25 2.71
1235 1269 4.276926 GGGATTAAGCCTTGCTCTACAATG 59.723 45.833 10.09 0.00 38.25 2.82
1236 1270 4.276926 GGATTAAGCCTTGCTCTACAATGG 59.723 45.833 1.47 0.00 38.25 3.16
1237 1271 2.887151 AAGCCTTGCTCTACAATGGT 57.113 45.000 0.00 0.00 38.25 3.55
1238 1272 2.409948 AGCCTTGCTCTACAATGGTC 57.590 50.000 0.00 0.00 37.72 4.02
1239 1273 1.912043 AGCCTTGCTCTACAATGGTCT 59.088 47.619 0.00 0.00 37.72 3.85
1240 1274 3.107601 AGCCTTGCTCTACAATGGTCTA 58.892 45.455 0.00 0.00 37.72 2.59
1241 1275 3.118592 AGCCTTGCTCTACAATGGTCTAC 60.119 47.826 0.00 0.00 37.72 2.59
1242 1276 3.118592 GCCTTGCTCTACAATGGTCTACT 60.119 47.826 0.00 0.00 37.72 2.57
1243 1277 4.688021 CCTTGCTCTACAATGGTCTACTC 58.312 47.826 0.00 0.00 37.72 2.59
1244 1278 4.355437 CTTGCTCTACAATGGTCTACTCG 58.645 47.826 0.00 0.00 37.72 4.18
1245 1279 2.099263 TGCTCTACAATGGTCTACTCGC 59.901 50.000 0.00 0.00 0.00 5.03
1246 1280 2.544069 GCTCTACAATGGTCTACTCGCC 60.544 54.545 0.00 0.00 0.00 5.54
1247 1281 2.029623 TCTACAATGGTCTACTCGCCC 58.970 52.381 0.00 0.00 0.00 6.13
1248 1282 0.742505 TACAATGGTCTACTCGCCCG 59.257 55.000 0.00 0.00 0.00 6.13
1249 1283 0.968901 ACAATGGTCTACTCGCCCGA 60.969 55.000 0.00 0.00 0.00 5.14
1250 1284 0.389391 CAATGGTCTACTCGCCCGAT 59.611 55.000 0.00 0.00 0.00 4.18
1251 1285 1.611977 CAATGGTCTACTCGCCCGATA 59.388 52.381 0.00 0.00 0.00 2.92
1252 1286 1.535833 ATGGTCTACTCGCCCGATAG 58.464 55.000 0.00 0.00 0.00 2.08
1253 1287 0.471191 TGGTCTACTCGCCCGATAGA 59.529 55.000 0.00 0.00 39.76 1.98
1254 1288 0.873721 GGTCTACTCGCCCGATAGAC 59.126 60.000 19.92 19.92 42.69 2.59
1255 1289 1.590932 GTCTACTCGCCCGATAGACA 58.409 55.000 21.49 2.57 42.86 3.41
1256 1290 2.152830 GTCTACTCGCCCGATAGACAT 58.847 52.381 21.49 0.76 42.86 3.06
1257 1291 2.160022 GTCTACTCGCCCGATAGACATC 59.840 54.545 21.49 7.36 42.86 3.06
1269 1303 3.832276 GATAGACATCGAGATGGACTGC 58.168 50.000 16.37 8.74 42.91 4.40
1270 1304 1.478631 AGACATCGAGATGGACTGCA 58.521 50.000 16.37 0.00 42.91 4.41
1271 1305 2.037901 AGACATCGAGATGGACTGCAT 58.962 47.619 16.37 0.00 42.91 3.96
1272 1306 2.133553 GACATCGAGATGGACTGCATG 58.866 52.381 16.37 0.00 42.91 4.06
1273 1307 1.202615 ACATCGAGATGGACTGCATGG 60.203 52.381 16.37 0.00 42.91 3.66
1274 1308 1.069668 CATCGAGATGGACTGCATGGA 59.930 52.381 5.22 0.00 35.24 3.41
1275 1309 1.417288 TCGAGATGGACTGCATGGAT 58.583 50.000 0.00 0.00 0.00 3.41
1276 1310 1.069668 TCGAGATGGACTGCATGGATG 59.930 52.381 0.00 0.00 0.00 3.51
1287 1321 2.115348 GCATGGATGCGATCAAGTTG 57.885 50.000 0.00 0.00 44.67 3.16
1288 1322 1.672363 GCATGGATGCGATCAAGTTGA 59.328 47.619 8.27 8.27 44.67 3.18
1289 1323 2.292569 GCATGGATGCGATCAAGTTGAT 59.707 45.455 18.31 18.31 44.67 2.57
1299 1333 2.839486 TCAAGTTGATCAAGTCGCCT 57.161 45.000 16.06 3.03 0.00 5.52
1300 1334 3.953712 TCAAGTTGATCAAGTCGCCTA 57.046 42.857 16.06 0.00 0.00 3.93
1301 1335 3.585862 TCAAGTTGATCAAGTCGCCTAC 58.414 45.455 16.06 0.00 0.00 3.18
1302 1336 2.673368 CAAGTTGATCAAGTCGCCTACC 59.327 50.000 16.06 0.00 0.00 3.18
1303 1337 1.207329 AGTTGATCAAGTCGCCTACCC 59.793 52.381 8.80 0.00 0.00 3.69
1304 1338 1.207329 GTTGATCAAGTCGCCTACCCT 59.793 52.381 8.80 0.00 0.00 4.34
1305 1339 1.568504 TGATCAAGTCGCCTACCCTT 58.431 50.000 0.00 0.00 0.00 3.95
1306 1340 1.207089 TGATCAAGTCGCCTACCCTTG 59.793 52.381 0.00 0.00 37.51 3.61
1307 1341 1.480954 GATCAAGTCGCCTACCCTTGA 59.519 52.381 4.04 4.04 46.05 3.02
1308 1342 0.606604 TCAAGTCGCCTACCCTTGAC 59.393 55.000 0.00 0.00 39.58 3.18
1309 1343 0.320374 CAAGTCGCCTACCCTTGACA 59.680 55.000 0.00 0.00 38.23 3.58
1310 1344 0.608640 AAGTCGCCTACCCTTGACAG 59.391 55.000 0.00 0.00 33.83 3.51
1311 1345 0.251653 AGTCGCCTACCCTTGACAGA 60.252 55.000 0.00 0.00 33.83 3.41
1312 1346 0.824759 GTCGCCTACCCTTGACAGAT 59.175 55.000 0.00 0.00 0.00 2.90
1313 1347 1.112113 TCGCCTACCCTTGACAGATC 58.888 55.000 0.00 0.00 0.00 2.75
1314 1348 0.249073 CGCCTACCCTTGACAGATCG 60.249 60.000 0.00 0.00 0.00 3.69
1315 1349 0.530870 GCCTACCCTTGACAGATCGC 60.531 60.000 0.00 0.00 0.00 4.58
1316 1350 0.105039 CCTACCCTTGACAGATCGCC 59.895 60.000 0.00 0.00 0.00 5.54
1317 1351 0.824109 CTACCCTTGACAGATCGCCA 59.176 55.000 0.00 0.00 0.00 5.69
1318 1352 0.535335 TACCCTTGACAGATCGCCAC 59.465 55.000 0.00 0.00 0.00 5.01
1319 1353 1.296392 CCCTTGACAGATCGCCACA 59.704 57.895 0.00 0.00 0.00 4.17
1320 1354 0.107508 CCCTTGACAGATCGCCACAT 60.108 55.000 0.00 0.00 0.00 3.21
1321 1355 1.138859 CCCTTGACAGATCGCCACATA 59.861 52.381 0.00 0.00 0.00 2.29
1322 1356 2.477825 CCTTGACAGATCGCCACATAG 58.522 52.381 0.00 0.00 0.00 2.23
1323 1357 2.101415 CCTTGACAGATCGCCACATAGA 59.899 50.000 0.00 0.00 0.00 1.98
1324 1358 3.430790 CCTTGACAGATCGCCACATAGAA 60.431 47.826 0.00 0.00 0.00 2.10
1325 1359 4.375272 CTTGACAGATCGCCACATAGAAT 58.625 43.478 0.00 0.00 0.00 2.40
1326 1360 3.721035 TGACAGATCGCCACATAGAATG 58.279 45.455 0.00 0.00 0.00 2.67
1327 1361 3.384467 TGACAGATCGCCACATAGAATGA 59.616 43.478 0.00 0.00 0.00 2.57
1328 1362 4.039609 TGACAGATCGCCACATAGAATGAT 59.960 41.667 0.00 0.00 0.00 2.45
1329 1363 5.243730 TGACAGATCGCCACATAGAATGATA 59.756 40.000 0.00 0.00 0.00 2.15
1330 1364 5.718146 ACAGATCGCCACATAGAATGATAG 58.282 41.667 0.00 0.00 0.00 2.08
1331 1365 5.244851 ACAGATCGCCACATAGAATGATAGT 59.755 40.000 0.00 0.00 0.00 2.12
1332 1366 6.162079 CAGATCGCCACATAGAATGATAGTT 58.838 40.000 0.00 0.00 0.00 2.24
1333 1367 6.309980 CAGATCGCCACATAGAATGATAGTTC 59.690 42.308 0.00 0.00 0.00 3.01
1334 1368 5.529581 TCGCCACATAGAATGATAGTTCA 57.470 39.130 0.00 0.00 36.00 3.18
1335 1369 5.532557 TCGCCACATAGAATGATAGTTCAG 58.467 41.667 0.00 0.00 34.73 3.02
1336 1370 4.687948 CGCCACATAGAATGATAGTTCAGG 59.312 45.833 0.00 0.00 34.73 3.86
1337 1371 5.509670 CGCCACATAGAATGATAGTTCAGGA 60.510 44.000 0.00 0.00 34.73 3.86
1338 1372 6.471146 GCCACATAGAATGATAGTTCAGGAT 58.529 40.000 0.00 0.00 34.73 3.24
1339 1373 7.577616 CGCCACATAGAATGATAGTTCAGGATA 60.578 40.741 0.00 0.00 34.73 2.59
1340 1374 8.263640 GCCACATAGAATGATAGTTCAGGATAT 58.736 37.037 0.00 0.00 34.73 1.63
1348 1382 9.377312 GAATGATAGTTCAGGATATTAAGAGGC 57.623 37.037 0.00 0.00 34.73 4.70
1349 1383 8.677870 ATGATAGTTCAGGATATTAAGAGGCT 57.322 34.615 0.00 0.00 34.73 4.58
1350 1384 8.128322 TGATAGTTCAGGATATTAAGAGGCTC 57.872 38.462 6.34 6.34 0.00 4.70
1351 1385 7.952930 TGATAGTTCAGGATATTAAGAGGCTCT 59.047 37.037 12.24 12.24 0.00 4.09
1352 1386 8.734593 ATAGTTCAGGATATTAAGAGGCTCTT 57.265 34.615 30.67 30.67 40.35 2.85
1353 1387 7.444703 AGTTCAGGATATTAAGAGGCTCTTT 57.555 36.000 32.69 19.36 37.89 2.52
1354 1388 7.278875 AGTTCAGGATATTAAGAGGCTCTTTG 58.721 38.462 32.69 22.33 37.89 2.77
1355 1389 6.179906 TCAGGATATTAAGAGGCTCTTTGG 57.820 41.667 32.69 14.18 37.89 3.28
1356 1390 5.667626 TCAGGATATTAAGAGGCTCTTTGGT 59.332 40.000 32.69 20.66 37.89 3.67
1357 1391 5.762218 CAGGATATTAAGAGGCTCTTTGGTG 59.238 44.000 32.69 16.86 37.89 4.17
1358 1392 5.667626 AGGATATTAAGAGGCTCTTTGGTGA 59.332 40.000 32.69 13.54 37.89 4.02
1359 1393 6.158695 AGGATATTAAGAGGCTCTTTGGTGAA 59.841 38.462 32.69 21.03 37.89 3.18
1360 1394 6.828785 GGATATTAAGAGGCTCTTTGGTGAAA 59.171 38.462 32.69 20.35 37.89 2.69
1361 1395 7.012799 GGATATTAAGAGGCTCTTTGGTGAAAG 59.987 40.741 32.69 0.00 37.89 2.62
1362 1396 2.575805 AGAGGCTCTTTGGTGAAAGG 57.424 50.000 12.24 0.00 39.36 3.11
1363 1397 1.074566 AGAGGCTCTTTGGTGAAAGGG 59.925 52.381 12.24 0.00 41.98 3.95
1364 1398 1.073923 GAGGCTCTTTGGTGAAAGGGA 59.926 52.381 7.40 0.00 41.66 4.20
1365 1399 1.713078 AGGCTCTTTGGTGAAAGGGAT 59.287 47.619 0.00 0.00 41.66 3.85
1366 1400 2.919602 AGGCTCTTTGGTGAAAGGGATA 59.080 45.455 0.00 0.00 41.66 2.59
1367 1401 3.529319 AGGCTCTTTGGTGAAAGGGATAT 59.471 43.478 0.00 0.00 41.66 1.63
1368 1402 3.885901 GGCTCTTTGGTGAAAGGGATATC 59.114 47.826 0.00 0.00 41.66 1.63
1369 1403 4.385754 GGCTCTTTGGTGAAAGGGATATCT 60.386 45.833 2.05 0.00 41.66 1.98
1370 1404 4.819088 GCTCTTTGGTGAAAGGGATATCTC 59.181 45.833 2.05 0.00 41.66 2.75
1371 1405 5.397334 GCTCTTTGGTGAAAGGGATATCTCT 60.397 44.000 0.00 0.00 41.66 3.10
1372 1406 6.183361 GCTCTTTGGTGAAAGGGATATCTCTA 60.183 42.308 5.28 0.00 41.66 2.43
1373 1407 7.474079 GCTCTTTGGTGAAAGGGATATCTCTAT 60.474 40.741 5.28 0.00 41.66 1.98
1374 1408 8.337118 TCTTTGGTGAAAGGGATATCTCTATT 57.663 34.615 5.28 2.77 39.36 1.73
1375 1409 8.213679 TCTTTGGTGAAAGGGATATCTCTATTG 58.786 37.037 5.28 0.00 39.36 1.90
1376 1410 5.869579 TGGTGAAAGGGATATCTCTATTGC 58.130 41.667 5.28 0.00 0.00 3.56
1377 1411 5.608437 TGGTGAAAGGGATATCTCTATTGCT 59.392 40.000 5.28 0.00 0.00 3.91
1378 1412 6.169800 GGTGAAAGGGATATCTCTATTGCTC 58.830 44.000 5.28 0.00 0.00 4.26
1379 1413 6.239714 GGTGAAAGGGATATCTCTATTGCTCA 60.240 42.308 5.28 1.82 0.00 4.26
1380 1414 7.393216 GTGAAAGGGATATCTCTATTGCTCAT 58.607 38.462 5.28 0.00 0.00 2.90
1381 1415 7.333921 GTGAAAGGGATATCTCTATTGCTCATG 59.666 40.741 5.28 0.00 0.00 3.07
1382 1416 6.949117 AAGGGATATCTCTATTGCTCATGT 57.051 37.500 5.28 0.00 0.00 3.21
1383 1417 8.441311 AAAGGGATATCTCTATTGCTCATGTA 57.559 34.615 5.28 0.00 0.00 2.29
1384 1418 8.441311 AAGGGATATCTCTATTGCTCATGTAA 57.559 34.615 5.28 0.00 0.00 2.41
1385 1419 8.076910 AGGGATATCTCTATTGCTCATGTAAG 57.923 38.462 2.28 0.00 0.00 2.34
1386 1420 7.677745 AGGGATATCTCTATTGCTCATGTAAGT 59.322 37.037 2.28 0.00 0.00 2.24
1387 1421 8.972127 GGGATATCTCTATTGCTCATGTAAGTA 58.028 37.037 2.05 0.00 0.00 2.24
1390 1424 9.760926 ATATCTCTATTGCTCATGTAAGTAGGA 57.239 33.333 0.00 0.00 0.00 2.94
1391 1425 7.898014 TCTCTATTGCTCATGTAAGTAGGAA 57.102 36.000 0.00 0.00 0.00 3.36
1392 1426 8.484214 TCTCTATTGCTCATGTAAGTAGGAAT 57.516 34.615 4.04 4.04 35.72 3.01
1393 1427 8.580720 TCTCTATTGCTCATGTAAGTAGGAATC 58.419 37.037 2.06 0.00 33.89 2.52
1394 1428 8.250143 TCTATTGCTCATGTAAGTAGGAATCA 57.750 34.615 2.06 0.00 33.89 2.57
1395 1429 8.363390 TCTATTGCTCATGTAAGTAGGAATCAG 58.637 37.037 2.06 1.03 33.89 2.90
1396 1430 6.544928 TTGCTCATGTAAGTAGGAATCAGA 57.455 37.500 0.00 0.00 0.00 3.27
1397 1431 6.544928 TGCTCATGTAAGTAGGAATCAGAA 57.455 37.500 0.00 0.00 0.00 3.02
1398 1432 6.341316 TGCTCATGTAAGTAGGAATCAGAAC 58.659 40.000 0.00 0.00 0.00 3.01
1399 1433 5.460419 GCTCATGTAAGTAGGAATCAGAACG 59.540 44.000 0.00 0.00 0.00 3.95
1400 1434 6.525578 TCATGTAAGTAGGAATCAGAACGT 57.474 37.500 0.00 0.00 0.00 3.99
1401 1435 6.931838 TCATGTAAGTAGGAATCAGAACGTT 58.068 36.000 0.00 0.00 0.00 3.99
1402 1436 6.811665 TCATGTAAGTAGGAATCAGAACGTTG 59.188 38.462 5.00 0.00 0.00 4.10
1403 1437 6.092955 TGTAAGTAGGAATCAGAACGTTGT 57.907 37.500 5.00 0.00 0.00 3.32
1404 1438 6.518493 TGTAAGTAGGAATCAGAACGTTGTT 58.482 36.000 5.00 0.00 0.00 2.83
1405 1439 7.660112 TGTAAGTAGGAATCAGAACGTTGTTA 58.340 34.615 5.00 0.00 0.00 2.41
1406 1440 7.811236 TGTAAGTAGGAATCAGAACGTTGTTAG 59.189 37.037 5.00 0.00 0.00 2.34
1407 1441 5.169295 AGTAGGAATCAGAACGTTGTTAGC 58.831 41.667 5.00 0.00 0.00 3.09
1408 1442 3.335579 AGGAATCAGAACGTTGTTAGCC 58.664 45.455 5.00 0.12 0.00 3.93
1409 1443 3.071479 GGAATCAGAACGTTGTTAGCCA 58.929 45.455 5.00 0.00 0.00 4.75
1410 1444 3.120304 GGAATCAGAACGTTGTTAGCCAC 60.120 47.826 5.00 0.00 0.00 5.01
1411 1445 2.605837 TCAGAACGTTGTTAGCCACA 57.394 45.000 5.00 0.00 0.00 4.17
1412 1446 2.206750 TCAGAACGTTGTTAGCCACAC 58.793 47.619 5.00 0.00 33.98 3.82
1413 1447 1.937223 CAGAACGTTGTTAGCCACACA 59.063 47.619 5.00 0.00 33.98 3.72
1414 1448 1.937899 AGAACGTTGTTAGCCACACAC 59.062 47.619 5.00 0.00 33.98 3.82
1415 1449 1.937899 GAACGTTGTTAGCCACACACT 59.062 47.619 5.00 0.00 33.98 3.55
1416 1450 2.032680 ACGTTGTTAGCCACACACTT 57.967 45.000 0.00 0.00 33.98 3.16
1417 1451 1.668751 ACGTTGTTAGCCACACACTTG 59.331 47.619 0.00 0.00 33.98 3.16
1418 1452 1.596954 CGTTGTTAGCCACACACTTGC 60.597 52.381 0.00 0.00 33.98 4.01
1419 1453 1.676006 GTTGTTAGCCACACACTTGCT 59.324 47.619 0.00 0.00 33.98 3.91
1420 1454 1.308047 TGTTAGCCACACACTTGCTG 58.692 50.000 0.00 0.00 36.57 4.41
1421 1455 1.308998 GTTAGCCACACACTTGCTGT 58.691 50.000 0.00 0.00 36.57 4.40
1422 1456 1.676006 GTTAGCCACACACTTGCTGTT 59.324 47.619 0.00 0.00 36.57 3.16
1423 1457 2.051334 TAGCCACACACTTGCTGTTT 57.949 45.000 0.00 0.00 36.57 2.83
1424 1458 1.185315 AGCCACACACTTGCTGTTTT 58.815 45.000 0.00 0.00 33.23 2.43
1425 1459 1.134946 AGCCACACACTTGCTGTTTTC 59.865 47.619 0.00 0.00 33.23 2.29
1426 1460 1.826327 CCACACACTTGCTGTTTTCG 58.174 50.000 0.00 0.00 0.00 3.46
1427 1461 1.533756 CCACACACTTGCTGTTTTCGG 60.534 52.381 0.00 0.00 0.00 4.30
1428 1462 1.400142 CACACACTTGCTGTTTTCGGA 59.600 47.619 0.00 0.00 0.00 4.55
1429 1463 1.400494 ACACACTTGCTGTTTTCGGAC 59.600 47.619 0.00 0.00 0.00 4.79
1430 1464 0.655733 ACACTTGCTGTTTTCGGACG 59.344 50.000 0.00 0.00 0.00 4.79
1431 1465 0.934496 CACTTGCTGTTTTCGGACGA 59.066 50.000 0.00 0.00 0.00 4.20
1432 1466 1.531149 CACTTGCTGTTTTCGGACGAT 59.469 47.619 0.00 0.00 0.00 3.73
1433 1467 1.798813 ACTTGCTGTTTTCGGACGATC 59.201 47.619 0.00 0.00 0.00 3.69
1434 1468 0.787787 TTGCTGTTTTCGGACGATCG 59.212 50.000 14.88 14.88 0.00 3.69
1435 1469 1.011968 TGCTGTTTTCGGACGATCGG 61.012 55.000 20.98 1.30 0.00 4.18
1436 1470 0.734942 GCTGTTTTCGGACGATCGGA 60.735 55.000 20.98 4.08 0.00 4.55
1437 1471 1.269166 CTGTTTTCGGACGATCGGAG 58.731 55.000 20.98 10.10 0.00 4.63
1438 1472 0.108992 TGTTTTCGGACGATCGGAGG 60.109 55.000 20.98 7.63 0.00 4.30
1439 1473 0.804933 GTTTTCGGACGATCGGAGGG 60.805 60.000 20.98 5.74 0.00 4.30
1440 1474 2.567564 TTTTCGGACGATCGGAGGGC 62.568 60.000 20.98 2.99 0.00 5.19
1451 1485 3.709567 GGAGGGCCGAACTACAGT 58.290 61.111 0.00 0.00 0.00 3.55
1452 1486 1.980844 GGAGGGCCGAACTACAGTT 59.019 57.895 0.00 0.00 41.64 3.16
1453 1487 0.323957 GGAGGGCCGAACTACAGTTT 59.676 55.000 0.00 0.00 38.56 2.66
1454 1488 1.439679 GAGGGCCGAACTACAGTTTG 58.560 55.000 0.00 2.79 38.56 2.93
1460 1494 2.294479 CGAACTACAGTTTGGTTGCG 57.706 50.000 1.91 0.00 38.56 4.85
1461 1495 1.659211 CGAACTACAGTTTGGTTGCGC 60.659 52.381 0.00 0.00 38.56 6.09
1462 1496 1.602377 GAACTACAGTTTGGTTGCGCT 59.398 47.619 9.73 0.00 38.56 5.92
1463 1497 1.226746 ACTACAGTTTGGTTGCGCTC 58.773 50.000 9.73 1.18 0.00 5.03
1464 1498 1.202651 ACTACAGTTTGGTTGCGCTCT 60.203 47.619 9.73 0.00 0.00 4.09
1465 1499 1.195448 CTACAGTTTGGTTGCGCTCTG 59.805 52.381 9.73 8.21 0.00 3.35
1466 1500 1.283793 CAGTTTGGTTGCGCTCTGG 59.716 57.895 9.73 0.00 0.00 3.86
1467 1501 1.148273 AGTTTGGTTGCGCTCTGGA 59.852 52.632 9.73 0.00 0.00 3.86
1468 1502 1.166531 AGTTTGGTTGCGCTCTGGAC 61.167 55.000 9.73 0.36 0.00 4.02
1469 1503 1.896660 TTTGGTTGCGCTCTGGACC 60.897 57.895 9.73 9.55 0.00 4.46
1470 1504 2.337879 TTTGGTTGCGCTCTGGACCT 62.338 55.000 9.73 0.00 33.33 3.85
1471 1505 2.743928 GGTTGCGCTCTGGACCTG 60.744 66.667 9.73 0.00 0.00 4.00
1472 1506 3.426568 GTTGCGCTCTGGACCTGC 61.427 66.667 9.73 0.00 0.00 4.85
1473 1507 3.939939 TTGCGCTCTGGACCTGCA 61.940 61.111 9.73 0.00 0.00 4.41
1474 1508 3.889134 TTGCGCTCTGGACCTGCAG 62.889 63.158 9.73 6.78 36.83 4.41
1475 1509 4.074526 GCGCTCTGGACCTGCAGA 62.075 66.667 17.39 0.00 0.00 4.26
1476 1510 2.125753 CGCTCTGGACCTGCAGAC 60.126 66.667 17.39 8.84 0.00 3.51
1477 1511 2.125753 GCTCTGGACCTGCAGACG 60.126 66.667 17.39 1.02 0.00 4.18
1478 1512 2.936912 GCTCTGGACCTGCAGACGT 61.937 63.158 17.39 5.08 0.00 4.34
1479 1513 1.668294 CTCTGGACCTGCAGACGTT 59.332 57.895 17.39 0.00 0.00 3.99
1480 1514 0.389166 CTCTGGACCTGCAGACGTTC 60.389 60.000 17.39 4.71 0.00 3.95
1481 1515 1.374758 CTGGACCTGCAGACGTTCC 60.375 63.158 17.39 15.03 0.00 3.62
1482 1516 1.821061 CTGGACCTGCAGACGTTCCT 61.821 60.000 17.39 0.00 0.00 3.36
1483 1517 1.079750 GGACCTGCAGACGTTCCTC 60.080 63.158 17.39 0.00 0.00 3.71
1484 1518 1.536943 GGACCTGCAGACGTTCCTCT 61.537 60.000 17.39 0.00 0.00 3.69
1485 1519 0.389166 GACCTGCAGACGTTCCTCTG 60.389 60.000 17.39 0.00 40.73 3.35
1491 1525 2.949451 CAGACGTTCCTCTGCTATGT 57.051 50.000 0.00 0.00 31.57 2.29
1493 1527 3.958704 CAGACGTTCCTCTGCTATGTAG 58.041 50.000 0.00 0.00 31.57 2.74
1494 1528 2.952978 AGACGTTCCTCTGCTATGTAGG 59.047 50.000 0.00 0.00 0.00 3.18
1495 1529 2.950309 GACGTTCCTCTGCTATGTAGGA 59.050 50.000 0.00 0.00 37.64 2.94
1496 1530 3.362706 ACGTTCCTCTGCTATGTAGGAA 58.637 45.455 0.00 0.00 45.04 3.36
1499 1533 3.292492 TCCTCTGCTATGTAGGAACGA 57.708 47.619 0.00 0.00 36.47 3.85
1500 1534 3.628008 TCCTCTGCTATGTAGGAACGAA 58.372 45.455 0.00 0.00 36.47 3.85
1501 1535 4.215908 TCCTCTGCTATGTAGGAACGAAT 58.784 43.478 0.00 0.00 36.47 3.34
1502 1536 5.382616 TCCTCTGCTATGTAGGAACGAATA 58.617 41.667 0.00 0.00 36.47 1.75
1503 1537 6.010850 TCCTCTGCTATGTAGGAACGAATAT 58.989 40.000 0.00 0.00 36.47 1.28
1504 1538 6.493802 TCCTCTGCTATGTAGGAACGAATATT 59.506 38.462 0.00 0.00 36.47 1.28
1505 1539 6.809196 CCTCTGCTATGTAGGAACGAATATTC 59.191 42.308 5.30 5.30 31.64 1.75
1515 1549 5.873179 GGAACGAATATTCCAACAGTTGA 57.127 39.130 15.36 0.00 46.49 3.18
1516 1550 5.869350 GGAACGAATATTCCAACAGTTGAG 58.131 41.667 15.36 5.23 46.49 3.02
1517 1551 4.946784 ACGAATATTCCAACAGTTGAGC 57.053 40.909 15.36 0.00 0.00 4.26
1518 1552 4.323417 ACGAATATTCCAACAGTTGAGCA 58.677 39.130 15.36 0.00 0.00 4.26
1519 1553 4.759693 ACGAATATTCCAACAGTTGAGCAA 59.240 37.500 15.36 4.96 0.00 3.91
1520 1554 5.415701 ACGAATATTCCAACAGTTGAGCAAT 59.584 36.000 15.36 11.44 0.00 3.56
1521 1555 5.740569 CGAATATTCCAACAGTTGAGCAATG 59.259 40.000 15.36 0.00 0.00 2.82
1522 1556 6.403527 CGAATATTCCAACAGTTGAGCAATGA 60.404 38.462 15.36 0.00 0.00 2.57
1523 1557 6.839124 ATATTCCAACAGTTGAGCAATGAA 57.161 33.333 15.36 8.62 0.00 2.57
1524 1558 4.998671 TTCCAACAGTTGAGCAATGAAA 57.001 36.364 15.36 0.00 0.00 2.69
1525 1559 5.534207 TTCCAACAGTTGAGCAATGAAAT 57.466 34.783 15.36 0.00 0.00 2.17
1526 1560 5.125100 TCCAACAGTTGAGCAATGAAATC 57.875 39.130 15.36 0.00 0.00 2.17
1527 1561 4.022068 TCCAACAGTTGAGCAATGAAATCC 60.022 41.667 15.36 0.00 0.00 3.01
1528 1562 4.021719 CCAACAGTTGAGCAATGAAATCCT 60.022 41.667 15.36 0.00 0.00 3.24
1529 1563 5.510179 CCAACAGTTGAGCAATGAAATCCTT 60.510 40.000 15.36 0.00 0.00 3.36
1530 1564 5.796424 ACAGTTGAGCAATGAAATCCTTT 57.204 34.783 0.00 0.00 0.00 3.11
1531 1565 6.165700 ACAGTTGAGCAATGAAATCCTTTT 57.834 33.333 0.00 0.00 0.00 2.27
1532 1566 7.288810 ACAGTTGAGCAATGAAATCCTTTTA 57.711 32.000 0.00 0.00 0.00 1.52
1533 1567 7.725251 ACAGTTGAGCAATGAAATCCTTTTAA 58.275 30.769 0.00 0.00 0.00 1.52
1534 1568 7.653311 ACAGTTGAGCAATGAAATCCTTTTAAC 59.347 33.333 0.00 0.00 0.00 2.01
1535 1569 7.116805 CAGTTGAGCAATGAAATCCTTTTAACC 59.883 37.037 0.00 0.00 0.00 2.85
1536 1570 6.036577 TGAGCAATGAAATCCTTTTAACCC 57.963 37.500 0.00 0.00 0.00 4.11
1537 1571 5.046663 TGAGCAATGAAATCCTTTTAACCCC 60.047 40.000 0.00 0.00 0.00 4.95
1538 1572 4.081697 AGCAATGAAATCCTTTTAACCCCG 60.082 41.667 0.00 0.00 0.00 5.73
1539 1573 4.180817 CAATGAAATCCTTTTAACCCCGC 58.819 43.478 0.00 0.00 0.00 6.13
1540 1574 2.877866 TGAAATCCTTTTAACCCCGCA 58.122 42.857 0.00 0.00 0.00 5.69
1541 1575 3.231818 TGAAATCCTTTTAACCCCGCAA 58.768 40.909 0.00 0.00 0.00 4.85
1542 1576 3.641906 TGAAATCCTTTTAACCCCGCAAA 59.358 39.130 0.00 0.00 0.00 3.68
1543 1577 4.101119 TGAAATCCTTTTAACCCCGCAAAA 59.899 37.500 0.00 0.00 0.00 2.44
1544 1578 4.691326 AATCCTTTTAACCCCGCAAAAA 57.309 36.364 0.00 0.00 0.00 1.94
1584 1620 4.015084 ACTGAAGCCCATGAATTTCTCTG 58.985 43.478 0.00 0.00 0.00 3.35
1703 1744 3.230134 TGCTGCACAAGGTTAGGATTTT 58.770 40.909 0.00 0.00 0.00 1.82
1763 1842 8.013378 GCACGTGTTATTTACTTAAGTTCACAT 58.987 33.333 18.38 3.90 0.00 3.21
1948 2027 5.162914 TGGTACTATGGGCTACTTAGATCCA 60.163 44.000 0.00 10.77 34.51 3.41
1967 2046 2.610479 CCAGAGTACGTCATGCACAACT 60.610 50.000 0.00 0.00 0.00 3.16
1969 2048 3.059884 AGAGTACGTCATGCACAACTTG 58.940 45.455 0.00 0.00 0.00 3.16
2366 2466 0.767375 TCTGGAAAGCTGCTGACCTT 59.233 50.000 20.41 5.62 0.00 3.50
2489 2589 1.039856 GGCAAAGAAGCTTGGGTTCA 58.960 50.000 2.10 0.00 41.76 3.18
2505 2605 3.329814 GGGTTCAAACTTTCCTAGGGAGA 59.670 47.826 9.46 0.00 31.21 3.71
2508 2608 5.483811 GTTCAAACTTTCCTAGGGAGAGAG 58.516 45.833 9.46 0.00 36.19 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 6.080648 ACAGCAACGATCGGAATAACTATA 57.919 37.500 20.98 0.00 0.00 1.31
140 141 6.344500 TGCACAAAACAGAAACCATTATTGT 58.656 32.000 0.00 0.00 0.00 2.71
266 278 9.798885 CAGTAGTTTTTCTCTTATCTGAAAACG 57.201 33.333 0.00 0.00 40.46 3.60
393 405 2.157738 CCAAGGAAGACAGCTCCAAAG 58.842 52.381 0.00 0.00 0.00 2.77
530 545 7.406799 AAAAAGACAAATATTTGAGTTGCGG 57.593 32.000 30.18 5.86 40.55 5.69
606 626 8.752766 AAATTTGACAATGCTCACTCATAAAG 57.247 30.769 0.00 0.00 0.00 1.85
883 911 6.003326 TGAATAGCCAAGATGAAGTGTTCAA 58.997 36.000 0.00 0.00 43.95 2.69
885 913 6.500684 TTGAATAGCCAAGATGAAGTGTTC 57.499 37.500 0.00 0.00 0.00 3.18
913 941 6.893005 ACTTAGATTAGCCGATATAAGAGCCT 59.107 38.462 14.62 0.00 35.45 4.58
914 942 7.102847 ACTTAGATTAGCCGATATAAGAGCC 57.897 40.000 14.62 0.00 35.45 4.70
915 943 8.989653 AAACTTAGATTAGCCGATATAAGAGC 57.010 34.615 14.62 0.00 35.45 4.09
1042 1076 7.051623 TCAACATTGAGTTTAGTAACCACACT 58.948 34.615 0.00 0.00 38.74 3.55
1043 1077 7.254227 TCAACATTGAGTTTAGTAACCACAC 57.746 36.000 0.00 0.00 38.74 3.82
1056 1090 2.859165 ACGACCCATCAACATTGAGT 57.141 45.000 0.23 0.00 41.08 3.41
1058 1092 2.073056 CGAACGACCCATCAACATTGA 58.927 47.619 0.00 0.00 42.14 2.57
1059 1093 1.804151 ACGAACGACCCATCAACATTG 59.196 47.619 0.14 0.00 0.00 2.82
1060 1094 2.178912 ACGAACGACCCATCAACATT 57.821 45.000 0.14 0.00 0.00 2.71
1061 1095 2.073816 GAACGAACGACCCATCAACAT 58.926 47.619 0.14 0.00 0.00 2.71
1062 1096 1.202545 TGAACGAACGACCCATCAACA 60.203 47.619 0.14 0.00 0.00 3.33
1063 1097 1.504359 TGAACGAACGACCCATCAAC 58.496 50.000 0.14 0.00 0.00 3.18
1064 1098 2.465860 ATGAACGAACGACCCATCAA 57.534 45.000 0.14 0.00 0.00 2.57
1065 1099 2.417651 GGTATGAACGAACGACCCATCA 60.418 50.000 0.14 0.00 0.00 3.07
1066 1100 2.199236 GGTATGAACGAACGACCCATC 58.801 52.381 0.14 0.00 0.00 3.51
1067 1101 1.470285 CGGTATGAACGAACGACCCAT 60.470 52.381 0.14 4.11 0.00 4.00
1068 1102 0.109179 CGGTATGAACGAACGACCCA 60.109 55.000 0.14 0.00 0.00 4.51
1069 1103 0.171007 TCGGTATGAACGAACGACCC 59.829 55.000 0.14 0.00 37.42 4.46
1070 1104 1.850441 CATCGGTATGAACGAACGACC 59.150 52.381 0.14 0.00 44.20 4.79
1071 1105 1.850441 CCATCGGTATGAACGAACGAC 59.150 52.381 0.14 0.00 44.20 4.34
1072 1106 1.473677 ACCATCGGTATGAACGAACGA 59.526 47.619 0.14 0.00 44.20 3.85
1073 1107 1.586578 CACCATCGGTATGAACGAACG 59.413 52.381 0.00 0.00 44.20 3.95
1074 1108 1.931172 CCACCATCGGTATGAACGAAC 59.069 52.381 0.00 0.00 44.20 3.95
1075 1109 1.826096 TCCACCATCGGTATGAACGAA 59.174 47.619 0.00 0.00 44.20 3.85
1076 1110 1.476477 TCCACCATCGGTATGAACGA 58.524 50.000 0.00 0.00 45.19 3.85
1077 1111 2.526304 ATCCACCATCGGTATGAACG 57.474 50.000 0.00 0.00 34.84 3.95
1078 1112 3.746492 GCTAATCCACCATCGGTATGAAC 59.254 47.826 0.00 0.00 34.84 3.18
1079 1113 3.389656 TGCTAATCCACCATCGGTATGAA 59.610 43.478 0.00 0.00 34.84 2.57
1080 1114 2.969262 TGCTAATCCACCATCGGTATGA 59.031 45.455 0.00 0.00 34.84 2.15
1081 1115 3.329386 CTGCTAATCCACCATCGGTATG 58.671 50.000 0.00 0.00 32.11 2.39
1082 1116 2.303022 CCTGCTAATCCACCATCGGTAT 59.697 50.000 0.00 0.00 32.11 2.73
1083 1117 1.691976 CCTGCTAATCCACCATCGGTA 59.308 52.381 0.00 0.00 32.11 4.02
1084 1118 0.469917 CCTGCTAATCCACCATCGGT 59.530 55.000 0.00 0.00 35.62 4.69
1085 1119 0.758734 TCCTGCTAATCCACCATCGG 59.241 55.000 0.00 0.00 0.00 4.18
1086 1120 1.875576 GCTCCTGCTAATCCACCATCG 60.876 57.143 0.00 0.00 36.03 3.84
1087 1121 1.544314 GGCTCCTGCTAATCCACCATC 60.544 57.143 0.00 0.00 39.59 3.51
1088 1122 0.475906 GGCTCCTGCTAATCCACCAT 59.524 55.000 0.00 0.00 39.59 3.55
1089 1123 1.915228 GGCTCCTGCTAATCCACCA 59.085 57.895 0.00 0.00 39.59 4.17
1090 1124 1.227674 CGGCTCCTGCTAATCCACC 60.228 63.158 0.00 0.00 39.59 4.61
1091 1125 1.227674 CCGGCTCCTGCTAATCCAC 60.228 63.158 0.00 0.00 39.59 4.02
1092 1126 0.397957 TACCGGCTCCTGCTAATCCA 60.398 55.000 0.00 0.00 39.59 3.41
1093 1127 0.977395 ATACCGGCTCCTGCTAATCC 59.023 55.000 0.00 0.00 39.59 3.01
1094 1128 1.618837 TCATACCGGCTCCTGCTAATC 59.381 52.381 0.00 0.00 39.59 1.75
1095 1129 1.717032 TCATACCGGCTCCTGCTAAT 58.283 50.000 0.00 0.00 39.59 1.73
1096 1130 1.618837 GATCATACCGGCTCCTGCTAA 59.381 52.381 0.00 0.00 39.59 3.09
1097 1131 1.203063 AGATCATACCGGCTCCTGCTA 60.203 52.381 0.00 0.00 39.59 3.49
1098 1132 0.470833 AGATCATACCGGCTCCTGCT 60.471 55.000 0.00 0.00 39.59 4.24
1099 1133 0.394565 AAGATCATACCGGCTCCTGC 59.605 55.000 0.00 0.00 38.76 4.85
1100 1134 2.351835 CGTAAGATCATACCGGCTCCTG 60.352 54.545 0.00 0.00 43.02 3.86
1101 1135 1.887198 CGTAAGATCATACCGGCTCCT 59.113 52.381 0.00 0.00 43.02 3.69
1102 1136 1.612463 ACGTAAGATCATACCGGCTCC 59.388 52.381 0.00 0.00 43.62 4.70
1103 1137 2.292569 TCACGTAAGATCATACCGGCTC 59.707 50.000 0.00 0.00 43.62 4.70
1104 1138 2.304092 TCACGTAAGATCATACCGGCT 58.696 47.619 0.00 0.00 43.62 5.52
1105 1139 2.787601 TCACGTAAGATCATACCGGC 57.212 50.000 0.00 0.00 43.62 6.13
1106 1140 6.527023 GTCATTATCACGTAAGATCATACCGG 59.473 42.308 0.00 0.00 43.62 5.28
1107 1141 6.248629 CGTCATTATCACGTAAGATCATACCG 59.751 42.308 2.65 1.47 43.62 4.02
1108 1142 6.527023 CCGTCATTATCACGTAAGATCATACC 59.473 42.308 2.65 0.00 43.62 2.73
1109 1143 6.033619 GCCGTCATTATCACGTAAGATCATAC 59.966 42.308 0.00 0.00 43.62 2.39
1110 1144 6.090783 GCCGTCATTATCACGTAAGATCATA 58.909 40.000 0.00 0.00 43.62 2.15
1111 1145 4.923871 GCCGTCATTATCACGTAAGATCAT 59.076 41.667 0.00 0.00 43.62 2.45
1112 1146 4.202070 TGCCGTCATTATCACGTAAGATCA 60.202 41.667 0.00 0.00 43.62 2.92
1113 1147 4.295870 TGCCGTCATTATCACGTAAGATC 58.704 43.478 0.00 0.00 43.62 2.75
1114 1148 4.316205 TGCCGTCATTATCACGTAAGAT 57.684 40.909 0.00 0.00 43.62 2.40
1115 1149 3.786516 TGCCGTCATTATCACGTAAGA 57.213 42.857 0.00 0.00 43.62 2.10
1116 1150 5.220586 AATGTTGCCGTCATTATCACGTAAG 60.221 40.000 0.00 0.00 37.26 2.34
1117 1151 3.586892 TGTTGCCGTCATTATCACGTAA 58.413 40.909 0.00 0.00 35.39 3.18
1118 1152 3.233684 TGTTGCCGTCATTATCACGTA 57.766 42.857 0.00 0.00 35.39 3.57
1119 1153 2.087501 TGTTGCCGTCATTATCACGT 57.912 45.000 0.00 0.00 35.39 4.49
1120 1154 3.673746 AATGTTGCCGTCATTATCACG 57.326 42.857 0.00 0.00 34.34 4.35
1124 1158 7.172190 CAGAGAAGATAATGTTGCCGTCATTAT 59.828 37.037 13.87 13.87 45.32 1.28
1125 1159 6.479990 CAGAGAAGATAATGTTGCCGTCATTA 59.520 38.462 7.44 7.44 40.47 1.90
1126 1160 5.295292 CAGAGAAGATAATGTTGCCGTCATT 59.705 40.000 0.00 0.00 38.72 2.57
1127 1161 4.813161 CAGAGAAGATAATGTTGCCGTCAT 59.187 41.667 0.00 0.00 0.00 3.06
1128 1162 4.183865 CAGAGAAGATAATGTTGCCGTCA 58.816 43.478 0.00 0.00 0.00 4.35
1129 1163 3.001736 GCAGAGAAGATAATGTTGCCGTC 59.998 47.826 0.00 0.00 0.00 4.79
1130 1164 2.939103 GCAGAGAAGATAATGTTGCCGT 59.061 45.455 0.00 0.00 0.00 5.68
1131 1165 3.201290 AGCAGAGAAGATAATGTTGCCG 58.799 45.455 0.00 0.00 0.00 5.69
1132 1166 4.397417 ACAAGCAGAGAAGATAATGTTGCC 59.603 41.667 0.00 0.00 0.00 4.52
1133 1167 5.557891 ACAAGCAGAGAAGATAATGTTGC 57.442 39.130 0.00 0.00 0.00 4.17
1134 1168 5.349817 ACGACAAGCAGAGAAGATAATGTTG 59.650 40.000 0.00 0.00 0.00 3.33
1135 1169 5.482908 ACGACAAGCAGAGAAGATAATGTT 58.517 37.500 0.00 0.00 0.00 2.71
1136 1170 5.078411 ACGACAAGCAGAGAAGATAATGT 57.922 39.130 0.00 0.00 0.00 2.71
1137 1171 7.706281 ATAACGACAAGCAGAGAAGATAATG 57.294 36.000 0.00 0.00 0.00 1.90
1138 1172 9.632807 GATATAACGACAAGCAGAGAAGATAAT 57.367 33.333 0.00 0.00 0.00 1.28
1139 1173 8.851145 AGATATAACGACAAGCAGAGAAGATAA 58.149 33.333 0.00 0.00 0.00 1.75
1140 1174 8.397575 AGATATAACGACAAGCAGAGAAGATA 57.602 34.615 0.00 0.00 0.00 1.98
1141 1175 7.283625 AGATATAACGACAAGCAGAGAAGAT 57.716 36.000 0.00 0.00 0.00 2.40
1142 1176 6.701145 AGATATAACGACAAGCAGAGAAGA 57.299 37.500 0.00 0.00 0.00 2.87
1143 1177 6.292061 GCAAGATATAACGACAAGCAGAGAAG 60.292 42.308 0.00 0.00 0.00 2.85
1144 1178 5.520288 GCAAGATATAACGACAAGCAGAGAA 59.480 40.000 0.00 0.00 0.00 2.87
1145 1179 5.043903 GCAAGATATAACGACAAGCAGAGA 58.956 41.667 0.00 0.00 0.00 3.10
1146 1180 4.805719 TGCAAGATATAACGACAAGCAGAG 59.194 41.667 0.00 0.00 0.00 3.35
1147 1181 4.754322 TGCAAGATATAACGACAAGCAGA 58.246 39.130 0.00 0.00 0.00 4.26
1148 1182 5.663795 ATGCAAGATATAACGACAAGCAG 57.336 39.130 0.00 0.00 32.59 4.24
1149 1183 5.353956 ACAATGCAAGATATAACGACAAGCA 59.646 36.000 0.00 0.00 0.00 3.91
1150 1184 5.810525 ACAATGCAAGATATAACGACAAGC 58.189 37.500 0.00 0.00 0.00 4.01
1151 1185 6.907212 GGAACAATGCAAGATATAACGACAAG 59.093 38.462 0.00 0.00 0.00 3.16
1152 1186 6.456315 CGGAACAATGCAAGATATAACGACAA 60.456 38.462 0.00 0.00 0.00 3.18
1153 1187 5.006261 CGGAACAATGCAAGATATAACGACA 59.994 40.000 0.00 0.00 0.00 4.35
1154 1188 5.432157 CGGAACAATGCAAGATATAACGAC 58.568 41.667 0.00 0.00 0.00 4.34
1155 1189 4.509970 CCGGAACAATGCAAGATATAACGA 59.490 41.667 0.00 0.00 0.00 3.85
1156 1190 4.509970 TCCGGAACAATGCAAGATATAACG 59.490 41.667 0.00 0.00 0.00 3.18
1157 1191 5.277828 GGTCCGGAACAATGCAAGATATAAC 60.278 44.000 16.61 0.00 0.00 1.89
1158 1192 4.819630 GGTCCGGAACAATGCAAGATATAA 59.180 41.667 16.61 0.00 0.00 0.98
1159 1193 4.385825 GGTCCGGAACAATGCAAGATATA 58.614 43.478 16.61 0.00 0.00 0.86
1160 1194 3.214328 GGTCCGGAACAATGCAAGATAT 58.786 45.455 16.61 0.00 0.00 1.63
1161 1195 2.639065 GGTCCGGAACAATGCAAGATA 58.361 47.619 16.61 0.00 0.00 1.98
1162 1196 1.463674 GGTCCGGAACAATGCAAGAT 58.536 50.000 16.61 0.00 0.00 2.40
1163 1197 0.953471 CGGTCCGGAACAATGCAAGA 60.953 55.000 21.79 0.00 0.00 3.02
1164 1198 1.501741 CGGTCCGGAACAATGCAAG 59.498 57.895 21.79 0.00 0.00 4.01
1165 1199 2.622011 GCGGTCCGGAACAATGCAA 61.622 57.895 21.79 0.00 0.00 4.08
1166 1200 3.053291 GCGGTCCGGAACAATGCA 61.053 61.111 21.79 0.00 0.00 3.96
1167 1201 2.746277 AGCGGTCCGGAACAATGC 60.746 61.111 21.79 15.24 0.00 3.56
1168 1202 2.106683 GGAGCGGTCCGGAACAATG 61.107 63.158 21.79 4.13 31.37 2.82
1169 1203 2.267961 GGAGCGGTCCGGAACAAT 59.732 61.111 21.79 6.75 31.37 2.71
1183 1217 1.376942 CCAACAGCTCAGCCTGGAG 60.377 63.158 4.30 0.00 37.16 3.86
1184 1218 2.752358 CCAACAGCTCAGCCTGGA 59.248 61.111 4.30 0.00 37.16 3.86
1185 1219 3.060615 GCCAACAGCTCAGCCTGG 61.061 66.667 5.78 5.78 38.99 4.45
1186 1220 1.677966 ATGCCAACAGCTCAGCCTG 60.678 57.895 0.00 0.00 44.23 4.85
1187 1221 1.677966 CATGCCAACAGCTCAGCCT 60.678 57.895 0.00 0.00 44.23 4.58
1188 1222 1.930908 GACATGCCAACAGCTCAGCC 61.931 60.000 0.00 0.00 44.23 4.85
1189 1223 1.239296 TGACATGCCAACAGCTCAGC 61.239 55.000 0.00 0.00 44.23 4.26
1190 1224 0.803117 CTGACATGCCAACAGCTCAG 59.197 55.000 0.00 0.00 44.23 3.35
1191 1225 0.607217 CCTGACATGCCAACAGCTCA 60.607 55.000 0.00 0.00 44.23 4.26
1192 1226 0.321919 TCCTGACATGCCAACAGCTC 60.322 55.000 0.00 0.00 44.23 4.09
1193 1227 0.322277 CTCCTGACATGCCAACAGCT 60.322 55.000 0.00 0.00 44.23 4.24
1194 1228 1.310933 CCTCCTGACATGCCAACAGC 61.311 60.000 0.00 0.00 44.14 4.40
1195 1229 0.679002 CCCTCCTGACATGCCAACAG 60.679 60.000 0.00 0.00 0.00 3.16
1196 1230 1.133181 TCCCTCCTGACATGCCAACA 61.133 55.000 0.00 0.00 0.00 3.33
1197 1231 0.257039 ATCCCTCCTGACATGCCAAC 59.743 55.000 0.00 0.00 0.00 3.77
1198 1232 1.002069 AATCCCTCCTGACATGCCAA 58.998 50.000 0.00 0.00 0.00 4.52
1199 1233 1.891933 TAATCCCTCCTGACATGCCA 58.108 50.000 0.00 0.00 0.00 4.92
1200 1234 2.856222 CTTAATCCCTCCTGACATGCC 58.144 52.381 0.00 0.00 0.00 4.40
1201 1235 2.225467 GCTTAATCCCTCCTGACATGC 58.775 52.381 0.00 0.00 0.00 4.06
1202 1236 2.441001 AGGCTTAATCCCTCCTGACATG 59.559 50.000 0.00 0.00 0.00 3.21
1203 1237 2.781667 AGGCTTAATCCCTCCTGACAT 58.218 47.619 0.00 0.00 0.00 3.06
1204 1238 2.239654 CAAGGCTTAATCCCTCCTGACA 59.760 50.000 0.00 0.00 0.00 3.58
1205 1239 2.924421 CAAGGCTTAATCCCTCCTGAC 58.076 52.381 0.00 0.00 0.00 3.51
1206 1240 1.212935 GCAAGGCTTAATCCCTCCTGA 59.787 52.381 0.00 0.00 0.00 3.86
1207 1241 1.213926 AGCAAGGCTTAATCCCTCCTG 59.786 52.381 0.00 0.00 33.89 3.86
1208 1242 1.492599 GAGCAAGGCTTAATCCCTCCT 59.507 52.381 0.00 0.00 39.88 3.69
1209 1243 1.492599 AGAGCAAGGCTTAATCCCTCC 59.507 52.381 0.00 0.00 39.88 4.30
1210 1244 3.134804 TGTAGAGCAAGGCTTAATCCCTC 59.865 47.826 0.00 1.52 39.88 4.30
1211 1245 3.115390 TGTAGAGCAAGGCTTAATCCCT 58.885 45.455 0.00 0.00 39.88 4.20
1212 1246 3.560636 TGTAGAGCAAGGCTTAATCCC 57.439 47.619 0.00 0.00 39.88 3.85
1213 1247 4.276926 CCATTGTAGAGCAAGGCTTAATCC 59.723 45.833 0.00 0.00 39.88 3.01
1214 1248 4.884164 ACCATTGTAGAGCAAGGCTTAATC 59.116 41.667 0.00 0.67 39.88 1.75
1215 1249 4.860022 ACCATTGTAGAGCAAGGCTTAAT 58.140 39.130 0.00 0.00 39.88 1.40
1216 1250 4.019321 AGACCATTGTAGAGCAAGGCTTAA 60.019 41.667 0.00 0.00 39.88 1.85
1217 1251 3.519510 AGACCATTGTAGAGCAAGGCTTA 59.480 43.478 0.00 0.00 39.88 3.09
1218 1252 2.307098 AGACCATTGTAGAGCAAGGCTT 59.693 45.455 0.00 0.00 39.88 4.35
1219 1253 1.912043 AGACCATTGTAGAGCAAGGCT 59.088 47.619 0.00 0.00 43.88 4.58
1220 1254 2.409948 AGACCATTGTAGAGCAAGGC 57.590 50.000 0.00 0.00 40.86 4.35
1221 1255 4.688021 GAGTAGACCATTGTAGAGCAAGG 58.312 47.826 0.00 0.00 40.86 3.61
1222 1256 4.355437 CGAGTAGACCATTGTAGAGCAAG 58.645 47.826 0.00 0.00 40.86 4.01
1223 1257 3.428999 GCGAGTAGACCATTGTAGAGCAA 60.429 47.826 0.00 0.00 41.89 3.91
1224 1258 2.099263 GCGAGTAGACCATTGTAGAGCA 59.901 50.000 0.00 0.00 0.00 4.26
1225 1259 2.544069 GGCGAGTAGACCATTGTAGAGC 60.544 54.545 0.00 0.00 0.00 4.09
1226 1260 3.357166 GGCGAGTAGACCATTGTAGAG 57.643 52.381 0.00 0.00 0.00 2.43
1236 1270 1.590932 TGTCTATCGGGCGAGTAGAC 58.409 55.000 12.20 12.20 42.81 2.59
1237 1271 2.424557 GATGTCTATCGGGCGAGTAGA 58.575 52.381 0.00 0.00 0.00 2.59
1238 1272 2.904011 GATGTCTATCGGGCGAGTAG 57.096 55.000 0.00 0.00 0.00 2.57
1248 1282 3.254411 TGCAGTCCATCTCGATGTCTATC 59.746 47.826 6.20 0.00 37.11 2.08
1249 1283 3.225940 TGCAGTCCATCTCGATGTCTAT 58.774 45.455 6.20 0.00 37.11 1.98
1250 1284 2.654863 TGCAGTCCATCTCGATGTCTA 58.345 47.619 6.20 0.00 37.11 2.59
1251 1285 1.478631 TGCAGTCCATCTCGATGTCT 58.521 50.000 6.20 2.14 37.11 3.41
1252 1286 2.133553 CATGCAGTCCATCTCGATGTC 58.866 52.381 6.20 0.09 37.11 3.06
1253 1287 1.202615 CCATGCAGTCCATCTCGATGT 60.203 52.381 6.20 0.00 37.11 3.06
1254 1288 1.069668 TCCATGCAGTCCATCTCGATG 59.930 52.381 0.00 0.00 38.51 3.84
1255 1289 1.417288 TCCATGCAGTCCATCTCGAT 58.583 50.000 0.00 0.00 29.71 3.59
1256 1290 1.069668 CATCCATGCAGTCCATCTCGA 59.930 52.381 0.00 0.00 29.71 4.04
1257 1291 1.509703 CATCCATGCAGTCCATCTCG 58.490 55.000 0.00 0.00 29.71 4.04
1266 1300 6.042365 ATCAACTTGATCGCATCCATGCAG 62.042 45.833 11.97 3.70 42.48 4.41
1267 1301 4.244828 ATCAACTTGATCGCATCCATGCA 61.245 43.478 11.97 0.00 42.48 3.96
1268 1302 2.292569 ATCAACTTGATCGCATCCATGC 59.707 45.455 1.08 1.08 38.57 4.06
1269 1303 4.143194 GATCAACTTGATCGCATCCATG 57.857 45.455 14.61 0.00 43.11 3.66
1278 1312 4.268884 GTAGGCGACTTGATCAACTTGATC 59.731 45.833 20.70 20.70 46.53 2.92
1279 1313 3.340814 AGGCGACTTGATCAACTTGAT 57.659 42.857 3.38 3.80 37.27 2.57
1280 1314 2.839486 AGGCGACTTGATCAACTTGA 57.161 45.000 3.38 0.00 37.44 3.02
1281 1315 2.673368 GGTAGGCGACTTGATCAACTTG 59.327 50.000 3.38 0.99 43.67 3.16
1282 1316 2.354805 GGGTAGGCGACTTGATCAACTT 60.355 50.000 3.38 0.00 43.67 2.66
1283 1317 1.207329 GGGTAGGCGACTTGATCAACT 59.793 52.381 3.38 2.35 43.67 3.16
1284 1318 1.207329 AGGGTAGGCGACTTGATCAAC 59.793 52.381 3.38 0.00 43.67 3.18
1285 1319 1.568504 AGGGTAGGCGACTTGATCAA 58.431 50.000 8.12 8.12 43.67 2.57
1286 1320 1.207089 CAAGGGTAGGCGACTTGATCA 59.793 52.381 0.00 0.00 43.13 2.92
1287 1321 1.480954 TCAAGGGTAGGCGACTTGATC 59.519 52.381 0.00 0.00 43.90 2.92
1288 1322 1.568504 TCAAGGGTAGGCGACTTGAT 58.431 50.000 0.00 0.00 43.90 2.57
1289 1323 0.606604 GTCAAGGGTAGGCGACTTGA 59.393 55.000 0.00 10.56 45.83 3.02
1290 1324 0.320374 TGTCAAGGGTAGGCGACTTG 59.680 55.000 0.00 0.00 43.67 3.16
1291 1325 0.608640 CTGTCAAGGGTAGGCGACTT 59.391 55.000 0.00 0.00 43.67 3.01
1293 1327 0.824759 ATCTGTCAAGGGTAGGCGAC 59.175 55.000 0.00 0.00 0.00 5.19
1294 1328 1.112113 GATCTGTCAAGGGTAGGCGA 58.888 55.000 0.00 0.00 0.00 5.54
1295 1329 0.249073 CGATCTGTCAAGGGTAGGCG 60.249 60.000 0.00 0.00 0.00 5.52
1296 1330 0.530870 GCGATCTGTCAAGGGTAGGC 60.531 60.000 0.00 0.00 0.00 3.93
1297 1331 0.105039 GGCGATCTGTCAAGGGTAGG 59.895 60.000 0.00 0.00 0.00 3.18
1298 1332 0.824109 TGGCGATCTGTCAAGGGTAG 59.176 55.000 0.00 0.00 0.00 3.18
1299 1333 0.535335 GTGGCGATCTGTCAAGGGTA 59.465 55.000 0.00 0.00 31.00 3.69
1300 1334 1.296715 GTGGCGATCTGTCAAGGGT 59.703 57.895 0.00 0.00 31.00 4.34
1301 1335 0.107508 ATGTGGCGATCTGTCAAGGG 60.108 55.000 0.00 0.00 31.00 3.95
1302 1336 2.101415 TCTATGTGGCGATCTGTCAAGG 59.899 50.000 0.00 0.00 31.00 3.61
1303 1337 3.443099 TCTATGTGGCGATCTGTCAAG 57.557 47.619 0.00 0.00 31.00 3.02
1304 1338 3.885724 TTCTATGTGGCGATCTGTCAA 57.114 42.857 0.00 0.00 31.00 3.18
1305 1339 3.384467 TCATTCTATGTGGCGATCTGTCA 59.616 43.478 0.00 0.00 0.00 3.58
1306 1340 3.982475 TCATTCTATGTGGCGATCTGTC 58.018 45.455 0.00 0.00 0.00 3.51
1307 1341 4.613925 ATCATTCTATGTGGCGATCTGT 57.386 40.909 0.00 0.00 0.00 3.41
1308 1342 5.718146 ACTATCATTCTATGTGGCGATCTG 58.282 41.667 0.00 0.00 0.00 2.90
1309 1343 5.991933 ACTATCATTCTATGTGGCGATCT 57.008 39.130 0.00 0.00 0.00 2.75
1310 1344 6.159293 TGAACTATCATTCTATGTGGCGATC 58.841 40.000 0.00 0.00 0.00 3.69
1311 1345 6.101650 TGAACTATCATTCTATGTGGCGAT 57.898 37.500 0.00 0.00 0.00 4.58
1312 1346 5.509670 CCTGAACTATCATTCTATGTGGCGA 60.510 44.000 0.00 0.00 34.37 5.54
1313 1347 4.687948 CCTGAACTATCATTCTATGTGGCG 59.312 45.833 0.00 0.00 34.37 5.69
1314 1348 5.858381 TCCTGAACTATCATTCTATGTGGC 58.142 41.667 0.00 0.00 34.37 5.01
1322 1356 9.377312 GCCTCTTAATATCCTGAACTATCATTC 57.623 37.037 0.00 0.00 34.37 2.67
1323 1357 9.110382 AGCCTCTTAATATCCTGAACTATCATT 57.890 33.333 0.00 0.00 34.37 2.57
1324 1358 8.677870 AGCCTCTTAATATCCTGAACTATCAT 57.322 34.615 0.00 0.00 34.37 2.45
1325 1359 7.952930 AGAGCCTCTTAATATCCTGAACTATCA 59.047 37.037 0.00 0.00 0.00 2.15
1326 1360 8.361169 AGAGCCTCTTAATATCCTGAACTATC 57.639 38.462 0.00 0.00 0.00 2.08
1327 1361 8.734593 AAGAGCCTCTTAATATCCTGAACTAT 57.265 34.615 4.84 0.00 34.42 2.12
1328 1362 8.424918 CAAAGAGCCTCTTAATATCCTGAACTA 58.575 37.037 7.53 0.00 35.27 2.24
1329 1363 7.278875 CAAAGAGCCTCTTAATATCCTGAACT 58.721 38.462 7.53 0.00 35.27 3.01
1330 1364 6.484977 CCAAAGAGCCTCTTAATATCCTGAAC 59.515 42.308 7.53 0.00 35.27 3.18
1331 1365 6.158695 ACCAAAGAGCCTCTTAATATCCTGAA 59.841 38.462 7.53 0.00 35.27 3.02
1332 1366 5.667626 ACCAAAGAGCCTCTTAATATCCTGA 59.332 40.000 7.53 0.00 35.27 3.86
1333 1367 5.762218 CACCAAAGAGCCTCTTAATATCCTG 59.238 44.000 7.53 0.26 35.27 3.86
1334 1368 5.667626 TCACCAAAGAGCCTCTTAATATCCT 59.332 40.000 7.53 0.00 35.27 3.24
1335 1369 5.930135 TCACCAAAGAGCCTCTTAATATCC 58.070 41.667 7.53 0.00 35.27 2.59
1336 1370 7.012799 CCTTTCACCAAAGAGCCTCTTAATATC 59.987 40.741 7.53 0.00 41.60 1.63
1337 1371 6.830838 CCTTTCACCAAAGAGCCTCTTAATAT 59.169 38.462 7.53 0.00 41.60 1.28
1338 1372 6.180472 CCTTTCACCAAAGAGCCTCTTAATA 58.820 40.000 7.53 0.00 41.60 0.98
1339 1373 5.012893 CCTTTCACCAAAGAGCCTCTTAAT 58.987 41.667 7.53 0.00 41.60 1.40
1340 1374 4.398319 CCTTTCACCAAAGAGCCTCTTAA 58.602 43.478 7.53 0.00 41.60 1.85
1341 1375 3.244911 CCCTTTCACCAAAGAGCCTCTTA 60.245 47.826 7.53 0.00 41.60 2.10
1342 1376 2.489802 CCCTTTCACCAAAGAGCCTCTT 60.490 50.000 0.00 0.00 41.60 2.85
1343 1377 1.074566 CCCTTTCACCAAAGAGCCTCT 59.925 52.381 0.00 0.00 41.60 3.69
1344 1378 1.073923 TCCCTTTCACCAAAGAGCCTC 59.926 52.381 0.00 0.00 41.60 4.70
1345 1379 1.149101 TCCCTTTCACCAAAGAGCCT 58.851 50.000 0.00 0.00 41.60 4.58
1346 1380 2.222227 ATCCCTTTCACCAAAGAGCC 57.778 50.000 0.00 0.00 41.60 4.70
1347 1381 4.786425 AGATATCCCTTTCACCAAAGAGC 58.214 43.478 0.00 0.00 41.60 4.09
1348 1382 6.245890 AGAGATATCCCTTTCACCAAAGAG 57.754 41.667 0.00 0.00 41.60 2.85
1349 1383 7.937700 ATAGAGATATCCCTTTCACCAAAGA 57.062 36.000 0.00 0.00 41.60 2.52
1350 1384 7.040823 GCAATAGAGATATCCCTTTCACCAAAG 60.041 40.741 0.00 0.00 39.11 2.77
1351 1385 6.772716 GCAATAGAGATATCCCTTTCACCAAA 59.227 38.462 0.00 0.00 0.00 3.28
1352 1386 6.101734 AGCAATAGAGATATCCCTTTCACCAA 59.898 38.462 0.00 0.00 0.00 3.67
1353 1387 5.608437 AGCAATAGAGATATCCCTTTCACCA 59.392 40.000 0.00 0.00 0.00 4.17
1354 1388 6.120507 AGCAATAGAGATATCCCTTTCACC 57.879 41.667 0.00 0.00 0.00 4.02
1355 1389 6.763355 TGAGCAATAGAGATATCCCTTTCAC 58.237 40.000 0.00 0.00 0.00 3.18
1356 1390 7.016957 ACATGAGCAATAGAGATATCCCTTTCA 59.983 37.037 0.00 0.00 0.00 2.69
1357 1391 7.393216 ACATGAGCAATAGAGATATCCCTTTC 58.607 38.462 0.00 0.00 0.00 2.62
1358 1392 7.327064 ACATGAGCAATAGAGATATCCCTTT 57.673 36.000 0.00 0.00 0.00 3.11
1359 1393 6.949117 ACATGAGCAATAGAGATATCCCTT 57.051 37.500 0.00 0.00 0.00 3.95
1360 1394 7.677745 ACTTACATGAGCAATAGAGATATCCCT 59.322 37.037 0.00 0.00 0.00 4.20
1361 1395 7.846066 ACTTACATGAGCAATAGAGATATCCC 58.154 38.462 0.00 0.00 0.00 3.85
1364 1398 9.760926 TCCTACTTACATGAGCAATAGAGATAT 57.239 33.333 0.00 0.00 0.00 1.63
1365 1399 9.588096 TTCCTACTTACATGAGCAATAGAGATA 57.412 33.333 0.00 0.00 0.00 1.98
1366 1400 8.484214 TTCCTACTTACATGAGCAATAGAGAT 57.516 34.615 0.00 0.00 0.00 2.75
1367 1401 7.898014 TTCCTACTTACATGAGCAATAGAGA 57.102 36.000 0.00 0.00 0.00 3.10
1368 1402 8.363390 TGATTCCTACTTACATGAGCAATAGAG 58.637 37.037 0.00 0.00 0.00 2.43
1369 1403 8.250143 TGATTCCTACTTACATGAGCAATAGA 57.750 34.615 0.00 0.00 0.00 1.98
1370 1404 8.363390 TCTGATTCCTACTTACATGAGCAATAG 58.637 37.037 0.00 0.00 0.00 1.73
1371 1405 8.250143 TCTGATTCCTACTTACATGAGCAATA 57.750 34.615 0.00 0.00 0.00 1.90
1372 1406 7.129457 TCTGATTCCTACTTACATGAGCAAT 57.871 36.000 0.00 0.00 0.00 3.56
1373 1407 6.544928 TCTGATTCCTACTTACATGAGCAA 57.455 37.500 0.00 0.00 0.00 3.91
1374 1408 6.341316 GTTCTGATTCCTACTTACATGAGCA 58.659 40.000 0.00 0.00 0.00 4.26
1375 1409 5.460419 CGTTCTGATTCCTACTTACATGAGC 59.540 44.000 0.00 0.00 0.00 4.26
1376 1410 6.565234 ACGTTCTGATTCCTACTTACATGAG 58.435 40.000 0.00 0.00 0.00 2.90
1377 1411 6.525578 ACGTTCTGATTCCTACTTACATGA 57.474 37.500 0.00 0.00 0.00 3.07
1378 1412 6.590292 ACAACGTTCTGATTCCTACTTACATG 59.410 38.462 0.00 0.00 0.00 3.21
1379 1413 6.698380 ACAACGTTCTGATTCCTACTTACAT 58.302 36.000 0.00 0.00 0.00 2.29
1380 1414 6.092955 ACAACGTTCTGATTCCTACTTACA 57.907 37.500 0.00 0.00 0.00 2.41
1381 1415 7.201418 GCTAACAACGTTCTGATTCCTACTTAC 60.201 40.741 0.00 0.00 0.00 2.34
1382 1416 6.810182 GCTAACAACGTTCTGATTCCTACTTA 59.190 38.462 0.00 0.00 0.00 2.24
1383 1417 5.638234 GCTAACAACGTTCTGATTCCTACTT 59.362 40.000 0.00 0.00 0.00 2.24
1384 1418 5.169295 GCTAACAACGTTCTGATTCCTACT 58.831 41.667 0.00 0.00 0.00 2.57
1385 1419 4.329256 GGCTAACAACGTTCTGATTCCTAC 59.671 45.833 0.00 0.00 0.00 3.18
1386 1420 4.020928 TGGCTAACAACGTTCTGATTCCTA 60.021 41.667 0.00 0.00 0.00 2.94
1387 1421 3.244422 TGGCTAACAACGTTCTGATTCCT 60.244 43.478 0.00 0.00 0.00 3.36
1388 1422 3.071479 TGGCTAACAACGTTCTGATTCC 58.929 45.455 0.00 0.00 0.00 3.01
1389 1423 3.496884 TGTGGCTAACAACGTTCTGATTC 59.503 43.478 0.00 0.00 35.24 2.52
1390 1424 3.250040 GTGTGGCTAACAACGTTCTGATT 59.750 43.478 0.00 0.00 41.57 2.57
1391 1425 2.806244 GTGTGGCTAACAACGTTCTGAT 59.194 45.455 0.00 0.00 41.57 2.90
1392 1426 2.206750 GTGTGGCTAACAACGTTCTGA 58.793 47.619 0.00 0.00 41.57 3.27
1393 1427 1.937223 TGTGTGGCTAACAACGTTCTG 59.063 47.619 0.00 0.00 41.57 3.02
1394 1428 1.937899 GTGTGTGGCTAACAACGTTCT 59.062 47.619 0.00 0.00 41.57 3.01
1395 1429 1.937899 AGTGTGTGGCTAACAACGTTC 59.062 47.619 0.00 0.00 41.57 3.95
1396 1430 2.032680 AGTGTGTGGCTAACAACGTT 57.967 45.000 0.00 0.00 41.57 3.99
1397 1431 1.668751 CAAGTGTGTGGCTAACAACGT 59.331 47.619 0.00 0.00 41.57 3.99
1398 1432 1.596954 GCAAGTGTGTGGCTAACAACG 60.597 52.381 0.00 0.00 41.57 4.10
1399 1433 1.676006 AGCAAGTGTGTGGCTAACAAC 59.324 47.619 0.00 0.00 41.57 3.32
1400 1434 1.675483 CAGCAAGTGTGTGGCTAACAA 59.325 47.619 0.00 0.00 41.57 2.83
1401 1435 1.308047 CAGCAAGTGTGTGGCTAACA 58.692 50.000 0.00 0.00 35.82 2.41
1402 1436 1.308998 ACAGCAAGTGTGTGGCTAAC 58.691 50.000 0.00 0.00 38.28 2.34
1403 1437 2.051334 AACAGCAAGTGTGTGGCTAA 57.949 45.000 0.00 0.00 40.26 3.09
1404 1438 2.051334 AAACAGCAAGTGTGTGGCTA 57.949 45.000 0.00 0.00 40.26 3.93
1405 1439 1.134946 GAAAACAGCAAGTGTGTGGCT 59.865 47.619 0.00 0.00 40.26 4.75
1406 1440 1.559831 GAAAACAGCAAGTGTGTGGC 58.440 50.000 0.00 0.00 40.26 5.01
1407 1441 1.533756 CCGAAAACAGCAAGTGTGTGG 60.534 52.381 0.00 0.00 40.26 4.17
1408 1442 1.400142 TCCGAAAACAGCAAGTGTGTG 59.600 47.619 0.00 0.00 40.26 3.82
1409 1443 1.400494 GTCCGAAAACAGCAAGTGTGT 59.600 47.619 0.00 0.00 40.26 3.72
1410 1444 1.594518 CGTCCGAAAACAGCAAGTGTG 60.595 52.381 0.00 0.00 40.26 3.82
1411 1445 0.655733 CGTCCGAAAACAGCAAGTGT 59.344 50.000 0.00 0.00 43.24 3.55
1412 1446 0.934496 TCGTCCGAAAACAGCAAGTG 59.066 50.000 0.00 0.00 0.00 3.16
1413 1447 1.798813 GATCGTCCGAAAACAGCAAGT 59.201 47.619 0.00 0.00 0.00 3.16
1414 1448 1.201812 CGATCGTCCGAAAACAGCAAG 60.202 52.381 7.03 0.00 0.00 4.01
1415 1449 0.787787 CGATCGTCCGAAAACAGCAA 59.212 50.000 7.03 0.00 0.00 3.91
1416 1450 1.011968 CCGATCGTCCGAAAACAGCA 61.012 55.000 15.09 0.00 0.00 4.41
1417 1451 0.734942 TCCGATCGTCCGAAAACAGC 60.735 55.000 15.09 0.00 0.00 4.40
1418 1452 1.269166 CTCCGATCGTCCGAAAACAG 58.731 55.000 15.09 0.00 0.00 3.16
1419 1453 0.108992 CCTCCGATCGTCCGAAAACA 60.109 55.000 15.09 0.00 0.00 2.83
1420 1454 0.804933 CCCTCCGATCGTCCGAAAAC 60.805 60.000 15.09 0.00 0.00 2.43
1421 1455 1.514087 CCCTCCGATCGTCCGAAAA 59.486 57.895 15.09 0.00 0.00 2.29
1422 1456 3.072486 GCCCTCCGATCGTCCGAAA 62.072 63.158 15.09 0.00 0.00 3.46
1423 1457 3.524606 GCCCTCCGATCGTCCGAA 61.525 66.667 15.09 0.00 0.00 4.30
1434 1468 0.323957 AAACTGTAGTTCGGCCCTCC 59.676 55.000 0.00 0.00 37.25 4.30
1435 1469 1.439679 CAAACTGTAGTTCGGCCCTC 58.560 55.000 0.00 0.00 37.25 4.30
1436 1470 0.036306 CCAAACTGTAGTTCGGCCCT 59.964 55.000 0.00 0.00 37.25 5.19
1437 1471 0.250597 ACCAAACTGTAGTTCGGCCC 60.251 55.000 0.00 0.00 35.56 5.80
1438 1472 1.265905 CAACCAAACTGTAGTTCGGCC 59.734 52.381 1.72 0.00 35.56 6.13
1439 1473 1.334689 GCAACCAAACTGTAGTTCGGC 60.335 52.381 1.72 0.00 35.56 5.54
1440 1474 1.070175 CGCAACCAAACTGTAGTTCGG 60.070 52.381 0.28 0.28 38.07 4.30
1441 1475 1.659211 GCGCAACCAAACTGTAGTTCG 60.659 52.381 0.30 0.00 37.25 3.95
1442 1476 1.602377 AGCGCAACCAAACTGTAGTTC 59.398 47.619 11.47 0.00 37.25 3.01
1443 1477 1.602377 GAGCGCAACCAAACTGTAGTT 59.398 47.619 11.47 0.00 40.50 2.24
1444 1478 1.202651 AGAGCGCAACCAAACTGTAGT 60.203 47.619 11.47 0.00 0.00 2.73
1445 1479 1.195448 CAGAGCGCAACCAAACTGTAG 59.805 52.381 11.47 0.00 0.00 2.74
1446 1480 1.225855 CAGAGCGCAACCAAACTGTA 58.774 50.000 11.47 0.00 0.00 2.74
1447 1481 1.447317 CCAGAGCGCAACCAAACTGT 61.447 55.000 11.47 0.00 0.00 3.55
1448 1482 1.165907 TCCAGAGCGCAACCAAACTG 61.166 55.000 11.47 7.02 0.00 3.16
1449 1483 1.148273 TCCAGAGCGCAACCAAACT 59.852 52.632 11.47 0.00 0.00 2.66
1450 1484 1.282875 GTCCAGAGCGCAACCAAAC 59.717 57.895 11.47 0.00 0.00 2.93
1451 1485 1.896660 GGTCCAGAGCGCAACCAAA 60.897 57.895 11.47 0.00 0.00 3.28
1452 1486 2.281484 GGTCCAGAGCGCAACCAA 60.281 61.111 11.47 0.00 0.00 3.67
1453 1487 3.241530 AGGTCCAGAGCGCAACCA 61.242 61.111 11.47 0.00 34.09 3.67
1454 1488 2.743928 CAGGTCCAGAGCGCAACC 60.744 66.667 11.47 8.99 0.00 3.77
1455 1489 3.426568 GCAGGTCCAGAGCGCAAC 61.427 66.667 11.47 2.78 0.00 4.17
1456 1490 3.889134 CTGCAGGTCCAGAGCGCAA 62.889 63.158 11.47 0.00 37.67 4.85
1457 1491 4.383861 CTGCAGGTCCAGAGCGCA 62.384 66.667 11.47 13.00 37.05 6.09
1458 1492 4.074526 TCTGCAGGTCCAGAGCGC 62.075 66.667 15.13 0.00 36.96 5.92
1459 1493 2.125753 GTCTGCAGGTCCAGAGCG 60.126 66.667 15.13 0.00 42.14 5.03
1460 1494 2.125753 CGTCTGCAGGTCCAGAGC 60.126 66.667 15.13 0.00 42.14 4.09
1461 1495 0.389166 GAACGTCTGCAGGTCCAGAG 60.389 60.000 15.13 0.47 42.14 3.35
1462 1496 1.666011 GAACGTCTGCAGGTCCAGA 59.334 57.895 15.13 0.00 39.42 3.86
1463 1497 1.374758 GGAACGTCTGCAGGTCCAG 60.375 63.158 15.13 3.69 0.00 3.86
1464 1498 1.816863 GAGGAACGTCTGCAGGTCCA 61.817 60.000 15.13 0.00 0.00 4.02
1465 1499 1.079750 GAGGAACGTCTGCAGGTCC 60.080 63.158 15.13 15.03 0.00 4.46
1466 1500 0.389166 CAGAGGAACGTCTGCAGGTC 60.389 60.000 15.13 6.81 37.74 3.85
1467 1501 1.668294 CAGAGGAACGTCTGCAGGT 59.332 57.895 15.13 1.12 37.74 4.00
1468 1502 4.586618 CAGAGGAACGTCTGCAGG 57.413 61.111 15.13 0.36 37.74 4.85
1472 1506 2.949451 ACATAGCAGAGGAACGTCTG 57.051 50.000 16.79 16.79 45.91 3.51
1473 1507 2.952978 CCTACATAGCAGAGGAACGTCT 59.047 50.000 0.00 0.00 31.45 4.18
1474 1508 2.950309 TCCTACATAGCAGAGGAACGTC 59.050 50.000 0.00 0.00 36.42 4.34
1475 1509 3.014304 TCCTACATAGCAGAGGAACGT 57.986 47.619 0.00 0.00 36.42 3.99
1478 1512 3.628008 TCGTTCCTACATAGCAGAGGAA 58.372 45.455 0.00 0.00 45.13 3.36
1479 1513 3.292492 TCGTTCCTACATAGCAGAGGA 57.708 47.619 0.00 0.00 37.60 3.71
1480 1514 4.592485 ATTCGTTCCTACATAGCAGAGG 57.408 45.455 0.00 0.00 0.00 3.69
1481 1515 6.809196 GGAATATTCGTTCCTACATAGCAGAG 59.191 42.308 9.32 0.00 43.49 3.35
1482 1516 6.266786 TGGAATATTCGTTCCTACATAGCAGA 59.733 38.462 9.32 0.00 46.32 4.26
1483 1517 6.455647 TGGAATATTCGTTCCTACATAGCAG 58.544 40.000 9.32 0.00 46.32 4.24
1484 1518 6.413783 TGGAATATTCGTTCCTACATAGCA 57.586 37.500 9.32 0.00 46.32 3.49
1485 1519 7.118422 GTTGGAATATTCGTTCCTACATAGC 57.882 40.000 9.32 0.00 46.45 2.97
1490 1524 6.592607 TCAACTGTTGGAATATTCGTTCCTAC 59.407 38.462 19.55 11.54 46.98 3.18
1491 1525 6.703319 TCAACTGTTGGAATATTCGTTCCTA 58.297 36.000 19.55 0.00 46.32 2.94
1492 1526 5.556915 TCAACTGTTGGAATATTCGTTCCT 58.443 37.500 19.55 0.00 46.32 3.36
1493 1527 5.673818 GCTCAACTGTTGGAATATTCGTTCC 60.674 44.000 19.55 0.00 46.35 3.62
1494 1528 5.106712 TGCTCAACTGTTGGAATATTCGTTC 60.107 40.000 19.55 3.04 0.00 3.95
1495 1529 4.759693 TGCTCAACTGTTGGAATATTCGTT 59.240 37.500 19.55 4.86 0.00 3.85
1496 1530 4.323417 TGCTCAACTGTTGGAATATTCGT 58.677 39.130 19.55 0.00 0.00 3.85
1497 1531 4.944962 TGCTCAACTGTTGGAATATTCG 57.055 40.909 19.55 0.00 0.00 3.34
1498 1532 6.855836 TCATTGCTCAACTGTTGGAATATTC 58.144 36.000 19.55 6.93 0.00 1.75
1499 1533 6.839124 TCATTGCTCAACTGTTGGAATATT 57.161 33.333 19.55 0.00 0.00 1.28
1500 1534 6.839124 TTCATTGCTCAACTGTTGGAATAT 57.161 33.333 19.55 6.92 0.00 1.28
1501 1535 6.647334 TTTCATTGCTCAACTGTTGGAATA 57.353 33.333 19.55 5.01 0.00 1.75
1502 1536 5.534207 TTTCATTGCTCAACTGTTGGAAT 57.466 34.783 19.55 12.42 0.00 3.01
1503 1537 4.998671 TTTCATTGCTCAACTGTTGGAA 57.001 36.364 19.55 11.16 0.00 3.53
1504 1538 4.022068 GGATTTCATTGCTCAACTGTTGGA 60.022 41.667 19.55 5.84 0.00 3.53
1505 1539 4.021719 AGGATTTCATTGCTCAACTGTTGG 60.022 41.667 19.55 11.68 0.00 3.77
1506 1540 5.130292 AGGATTTCATTGCTCAACTGTTG 57.870 39.130 14.24 14.24 0.00 3.33
1507 1541 5.796424 AAGGATTTCATTGCTCAACTGTT 57.204 34.783 0.00 0.00 0.00 3.16
1508 1542 5.796424 AAAGGATTTCATTGCTCAACTGT 57.204 34.783 0.00 0.00 27.08 3.55
1509 1543 7.116805 GGTTAAAAGGATTTCATTGCTCAACTG 59.883 37.037 0.00 0.00 37.28 3.16
1510 1544 7.154656 GGTTAAAAGGATTTCATTGCTCAACT 58.845 34.615 0.00 0.00 37.28 3.16
1511 1545 6.368791 GGGTTAAAAGGATTTCATTGCTCAAC 59.631 38.462 0.00 0.00 37.28 3.18
1512 1546 6.463360 GGGTTAAAAGGATTTCATTGCTCAA 58.537 36.000 0.00 0.00 37.28 3.02
1513 1547 5.046663 GGGGTTAAAAGGATTTCATTGCTCA 60.047 40.000 0.00 0.00 37.28 4.26
1514 1548 5.419542 GGGGTTAAAAGGATTTCATTGCTC 58.580 41.667 0.00 0.00 37.28 4.26
1515 1549 4.081697 CGGGGTTAAAAGGATTTCATTGCT 60.082 41.667 0.00 0.00 37.28 3.91
1516 1550 4.180817 CGGGGTTAAAAGGATTTCATTGC 58.819 43.478 0.00 0.00 37.28 3.56
1517 1551 4.180817 GCGGGGTTAAAAGGATTTCATTG 58.819 43.478 0.00 0.00 37.28 2.82
1518 1552 3.835395 TGCGGGGTTAAAAGGATTTCATT 59.165 39.130 0.00 0.00 37.28 2.57
1519 1553 3.436243 TGCGGGGTTAAAAGGATTTCAT 58.564 40.909 0.00 0.00 37.28 2.57
1520 1554 2.877866 TGCGGGGTTAAAAGGATTTCA 58.122 42.857 0.00 0.00 37.28 2.69
1521 1555 3.945981 TTGCGGGGTTAAAAGGATTTC 57.054 42.857 0.00 0.00 37.28 2.17
1522 1556 4.691326 TTTTGCGGGGTTAAAAGGATTT 57.309 36.364 0.00 0.00 42.41 2.17
1523 1557 4.691326 TTTTTGCGGGGTTAAAAGGATT 57.309 36.364 0.00 0.00 0.00 3.01
1544 1578 7.255569 GCTTCAGTTTAGTAACCACACTTTTT 58.744 34.615 0.00 0.00 34.71 1.94
1545 1579 6.183360 GGCTTCAGTTTAGTAACCACACTTTT 60.183 38.462 0.00 0.00 34.71 2.27
1546 1580 5.298527 GGCTTCAGTTTAGTAACCACACTTT 59.701 40.000 0.00 0.00 34.71 2.66
1555 1589 7.669722 AGAAATTCATGGGCTTCAGTTTAGTAA 59.330 33.333 0.00 0.00 0.00 2.24
1703 1744 6.907961 TCTAAGGAACTAGTAGTAGATGGCA 58.092 40.000 11.68 0.00 38.49 4.92
1763 1842 2.099756 CGATGTGCAGATACTCCAGACA 59.900 50.000 0.00 0.00 0.00 3.41
1948 2027 3.059884 CAAGTTGTGCATGACGTACTCT 58.940 45.455 0.00 0.00 0.00 3.24
1967 2046 6.014584 TGAAGCAAGTATGTAGGAGAAGACAA 60.015 38.462 0.00 0.00 0.00 3.18
1969 2048 5.967088 TGAAGCAAGTATGTAGGAGAAGAC 58.033 41.667 0.00 0.00 0.00 3.01
2248 2348 3.371063 ACTCGCCGACGTGGACAT 61.371 61.111 0.00 0.00 42.00 3.06
2489 2589 3.841255 CACCTCTCTCCCTAGGAAAGTTT 59.159 47.826 11.48 0.00 36.66 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.