Multiple sequence alignment - TraesCS6B01G146400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G146400 chr6B 100.000 4246 0 0 1 4246 147010754 147014999 0.000000e+00 7841.0
1 TraesCS6B01G146400 chr6B 90.789 76 4 2 4173 4246 691066687 691066613 9.720000e-17 99.0
2 TraesCS6B01G146400 chr6A 89.041 2409 172 40 847 3204 89295521 89297888 0.000000e+00 2902.0
3 TraesCS6B01G146400 chr6A 87.894 603 56 10 3572 4171 89300984 89301572 0.000000e+00 693.0
4 TraesCS6B01G146400 chr6A 84.435 469 24 13 1 443 89294834 89295279 2.360000e-112 416.0
5 TraesCS6B01G146400 chr6A 86.047 172 17 5 3203 3374 89299151 89299315 1.210000e-40 178.0
6 TraesCS6B01G146400 chr6A 88.158 76 7 1 4173 4246 83643268 83643193 5.850000e-14 89.8
7 TraesCS6B01G146400 chr6A 88.158 76 7 1 4173 4246 254139144 254139069 5.850000e-14 89.8
8 TraesCS6B01G146400 chr6D 91.944 1291 79 17 985 2260 72349606 72350886 0.000000e+00 1784.0
9 TraesCS6B01G146400 chr6D 88.451 1091 69 21 2322 3373 72351106 72352178 0.000000e+00 1264.0
10 TraesCS6B01G146400 chr6D 88.826 707 59 7 3400 4096 72403839 72404535 0.000000e+00 850.0
11 TraesCS6B01G146400 chr6D 84.553 615 34 23 1 583 72348837 72349422 1.730000e-153 553.0
12 TraesCS6B01G146400 chr6D 87.273 110 13 1 855 964 72349511 72349619 1.600000e-24 124.0
13 TraesCS6B01G146400 chr6D 89.610 77 6 1 4172 4246 313785437 313785361 3.490000e-16 97.1
14 TraesCS6B01G146400 chr4A 90.865 208 12 1 641 848 729222779 729222579 5.410000e-69 272.0
15 TraesCS6B01G146400 chr4A 85.714 77 9 1 4172 4246 562610557 562610481 3.520000e-11 80.5
16 TraesCS6B01G146400 chr2D 91.176 204 10 3 645 848 401289116 401288921 1.950000e-68 270.0
17 TraesCS6B01G146400 chr2D 90.789 76 5 1 4173 4246 331639078 331639003 2.700000e-17 100.0
18 TraesCS6B01G146400 chr7D 90.047 211 14 1 642 852 65790298 65790095 2.520000e-67 267.0
19 TraesCS6B01G146400 chr7D 89.202 213 15 3 642 854 400865416 400865620 4.210000e-65 259.0
20 TraesCS6B01G146400 chr7D 89.151 212 13 4 642 852 411305742 411305944 5.450000e-64 255.0
21 TraesCS6B01G146400 chr5D 90.196 204 12 3 645 848 256208059 256207864 4.210000e-65 259.0
22 TraesCS6B01G146400 chr5D 88.000 75 7 1 4173 4245 423442530 423442456 2.100000e-13 87.9
23 TraesCS6B01G146400 chr1A 88.995 209 16 2 642 850 89083261 89083060 7.050000e-63 252.0
24 TraesCS6B01G146400 chr4D 87.838 222 16 5 633 853 46049245 46049034 2.530000e-62 250.0
25 TraesCS6B01G146400 chr4D 85.526 76 9 1 4173 4246 34128981 34128906 1.270000e-10 78.7
26 TraesCS6B01G146400 chr2B 88.725 204 16 3 645 848 42318295 42318491 4.240000e-60 243.0
27 TraesCS6B01G146400 chr2B 93.421 76 3 1 4173 4246 72737179 72737104 1.250000e-20 111.0
28 TraesCS6B01G146400 chr1B 92.208 77 4 1 4172 4246 270664654 270664730 1.610000e-19 108.0
29 TraesCS6B01G146400 chr4B 89.474 76 6 1 4173 4246 458352962 458353037 1.260000e-15 95.3
30 TraesCS6B01G146400 chr3B 89.474 76 6 1 4173 4246 227016797 227016872 1.260000e-15 95.3
31 TraesCS6B01G146400 chr2A 88.608 79 7 1 4169 4245 59170570 59170648 1.260000e-15 95.3
32 TraesCS6B01G146400 chr2A 88.158 76 7 1 4173 4246 522793216 522793291 5.850000e-14 89.8
33 TraesCS6B01G146400 chr1D 89.474 76 6 1 4173 4246 426426989 426426914 1.260000e-15 95.3
34 TraesCS6B01G146400 chr3D 90.909 66 4 1 4183 4246 349795966 349795901 2.100000e-13 87.9
35 TraesCS6B01G146400 chr5A 88.525 61 5 1 4188 4246 418835334 418835274 5.890000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G146400 chr6B 147010754 147014999 4245 False 7841.00 7841 100.00000 1 4246 1 chr6B.!!$F1 4245
1 TraesCS6B01G146400 chr6A 89294834 89301572 6738 False 1047.25 2902 86.85425 1 4171 4 chr6A.!!$F1 4170
2 TraesCS6B01G146400 chr6D 72348837 72352178 3341 False 931.25 1784 88.05525 1 3373 4 chr6D.!!$F2 3372
3 TraesCS6B01G146400 chr6D 72403839 72404535 696 False 850.00 850 88.82600 3400 4096 1 chr6D.!!$F1 696

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
681 786 0.034089 GGTGCTTATGGGAGGTGCTT 60.034 55.0 0.00 0.0 0.0 3.91 F
834 939 0.178873 ACCTCCTTAAGCACCTCCCA 60.179 55.0 0.00 0.0 0.0 4.37 F
846 951 0.331616 ACCTCCCATTGTACAAGGCC 59.668 55.0 14.66 0.0 0.0 5.19 F
847 952 0.625849 CCTCCCATTGTACAAGGCCT 59.374 55.0 14.66 0.0 0.0 5.19 F
2162 2289 0.820226 TGAGAGATCCAAGGCGTCTG 59.180 55.0 0.00 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2319 2637 1.059913 AACTGAAGTCACCCAGGAGG 58.940 55.000 0.00 0.00 43.78 4.30 R
2740 3097 1.966354 TGTGCATTGTACAATTGGGCA 59.034 42.857 21.66 21.66 0.00 5.36 R
2828 3185 2.577563 TCCATCCTTTGATTCTCAGGCA 59.422 45.455 0.00 0.00 0.00 4.75 R
2865 3222 0.108138 CCTCACCGTGATCCCTTGTC 60.108 60.000 0.62 0.00 0.00 3.18 R
4165 7282 0.322816 TAGGACTACGACAACGGCCT 60.323 55.000 0.00 0.00 44.46 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
189 218 0.252197 AAATAGCCACACGTCCCCTC 59.748 55.000 0.00 0.00 0.00 4.30
191 220 2.531483 ATAGCCACACGTCCCCTCCT 62.531 60.000 0.00 0.00 0.00 3.69
194 223 4.742201 CACACGTCCCCTCCTGCG 62.742 72.222 0.00 0.00 0.00 5.18
265 295 0.389166 GAGACTCTTGCCTGGACACG 60.389 60.000 0.00 0.00 0.00 4.49
277 307 2.299297 CCTGGACACGAAGAAAGGTAGT 59.701 50.000 0.00 0.00 0.00 2.73
313 343 1.777819 CTTCGCTGCTGTTCGTCTG 59.222 57.895 0.00 0.00 0.00 3.51
314 344 0.941463 CTTCGCTGCTGTTCGTCTGT 60.941 55.000 0.00 0.00 0.00 3.41
315 345 1.215014 TTCGCTGCTGTTCGTCTGTG 61.215 55.000 0.00 0.00 0.00 3.66
316 346 2.553268 GCTGCTGTTCGTCTGTGC 59.447 61.111 0.00 0.00 0.00 4.57
317 347 2.959357 GCTGCTGTTCGTCTGTGCC 61.959 63.158 0.00 0.00 0.00 5.01
318 348 2.280797 TGCTGTTCGTCTGTGCCC 60.281 61.111 0.00 0.00 0.00 5.36
319 349 3.414700 GCTGTTCGTCTGTGCCCG 61.415 66.667 0.00 0.00 0.00 6.13
320 350 2.338620 CTGTTCGTCTGTGCCCGA 59.661 61.111 0.00 0.00 0.00 5.14
321 351 1.734477 CTGTTCGTCTGTGCCCGAG 60.734 63.158 0.00 0.00 34.16 4.63
322 352 2.142357 CTGTTCGTCTGTGCCCGAGA 62.142 60.000 0.00 0.00 34.16 4.04
323 353 1.444553 GTTCGTCTGTGCCCGAGAG 60.445 63.158 0.00 0.00 34.16 3.20
324 354 1.901948 TTCGTCTGTGCCCGAGAGT 60.902 57.895 0.00 0.00 34.16 3.24
325 355 2.126307 CGTCTGTGCCCGAGAGTG 60.126 66.667 0.00 0.00 0.00 3.51
326 356 2.626780 CGTCTGTGCCCGAGAGTGA 61.627 63.158 0.00 0.00 0.00 3.41
327 357 1.080434 GTCTGTGCCCGAGAGTGAC 60.080 63.158 0.00 0.00 0.00 3.67
328 358 2.262915 CTGTGCCCGAGAGTGACC 59.737 66.667 0.00 0.00 0.00 4.02
329 359 3.633094 CTGTGCCCGAGAGTGACCG 62.633 68.421 0.00 0.00 0.00 4.79
330 360 3.371063 GTGCCCGAGAGTGACCGA 61.371 66.667 0.00 0.00 0.00 4.69
331 361 3.371063 TGCCCGAGAGTGACCGAC 61.371 66.667 0.00 0.00 0.00 4.79
332 362 4.131088 GCCCGAGAGTGACCGACC 62.131 72.222 0.00 0.00 0.00 4.79
372 422 0.111446 CTCCGATGCCTCTCCTCCTA 59.889 60.000 0.00 0.00 0.00 2.94
374 424 0.468214 CCGATGCCTCTCCTCCTACA 60.468 60.000 0.00 0.00 0.00 2.74
375 425 1.626686 CGATGCCTCTCCTCCTACAT 58.373 55.000 0.00 0.00 0.00 2.29
376 426 1.543802 CGATGCCTCTCCTCCTACATC 59.456 57.143 0.00 0.00 0.00 3.06
377 427 2.603021 GATGCCTCTCCTCCTACATCA 58.397 52.381 0.00 0.00 35.21 3.07
397 447 7.170965 ACATCATCAAGGTAACAAGATGTCTT 58.829 34.615 10.94 0.00 45.13 3.01
402 452 6.223852 TCAAGGTAACAAGATGTCTTCAGTC 58.776 40.000 0.00 0.00 41.41 3.51
403 453 4.810790 AGGTAACAAGATGTCTTCAGTCG 58.189 43.478 0.00 0.00 41.41 4.18
425 475 4.910456 CGCCGTATTCTTCAGTATCAGTAC 59.090 45.833 0.00 0.00 0.00 2.73
437 487 5.127194 TCAGTATCAGTACCACACCTGATTC 59.873 44.000 7.39 3.38 37.65 2.52
443 493 1.149101 ACCACACCTGATTCCCTTGT 58.851 50.000 0.00 0.00 0.00 3.16
444 494 1.499007 ACCACACCTGATTCCCTTGTT 59.501 47.619 0.00 0.00 0.00 2.83
445 495 1.888512 CCACACCTGATTCCCTTGTTG 59.111 52.381 0.00 0.00 0.00 3.33
447 497 1.145738 ACACCTGATTCCCTTGTTGCT 59.854 47.619 0.00 0.00 0.00 3.91
448 498 2.242043 CACCTGATTCCCTTGTTGCTT 58.758 47.619 0.00 0.00 0.00 3.91
450 500 1.821136 CCTGATTCCCTTGTTGCTTCC 59.179 52.381 0.00 0.00 0.00 3.46
451 501 1.470098 CTGATTCCCTTGTTGCTTCCG 59.530 52.381 0.00 0.00 0.00 4.30
452 502 1.202879 TGATTCCCTTGTTGCTTCCGT 60.203 47.619 0.00 0.00 0.00 4.69
454 504 1.028905 TTCCCTTGTTGCTTCCGTTG 58.971 50.000 0.00 0.00 0.00 4.10
455 505 1.007387 CCCTTGTTGCTTCCGTTGC 60.007 57.895 0.00 0.00 0.00 4.17
490 567 7.218614 TCCAACAAGAGAAGTTTATTTCGGTA 58.781 34.615 0.00 0.00 32.33 4.02
496 573 9.262472 CAAGAGAAGTTTATTTCGGTAATTTCG 57.738 33.333 0.00 0.00 32.33 3.46
498 575 8.654215 AGAGAAGTTTATTTCGGTAATTTCGAC 58.346 33.333 3.56 0.00 36.30 4.20
499 576 8.543862 AGAAGTTTATTTCGGTAATTTCGACT 57.456 30.769 3.56 0.00 36.30 4.18
500 577 9.643693 AGAAGTTTATTTCGGTAATTTCGACTA 57.356 29.630 3.56 0.00 36.30 2.59
501 578 9.680946 GAAGTTTATTTCGGTAATTTCGACTAC 57.319 33.333 3.56 0.00 36.30 2.73
502 579 8.761575 AGTTTATTTCGGTAATTTCGACTACA 57.238 30.769 3.56 0.00 36.30 2.74
503 580 9.206870 AGTTTATTTCGGTAATTTCGACTACAA 57.793 29.630 3.56 0.00 36.30 2.41
504 581 9.977762 GTTTATTTCGGTAATTTCGACTACAAT 57.022 29.630 3.56 4.35 36.30 2.71
506 583 9.590451 TTATTTCGGTAATTTCGACTACAATCT 57.410 29.630 3.56 0.00 36.30 2.40
526 603 1.593196 TATTTACAGATGCGGCAGGC 58.407 50.000 9.25 2.96 43.96 4.85
535 612 2.124320 GCGGCAGGCAAGGGAATA 60.124 61.111 0.00 0.00 42.87 1.75
536 613 2.189499 GCGGCAGGCAAGGGAATAG 61.189 63.158 0.00 0.00 42.87 1.73
539 621 1.393603 GGCAGGCAAGGGAATAGAAC 58.606 55.000 0.00 0.00 0.00 3.01
544 626 2.025887 AGGCAAGGGAATAGAACACTGG 60.026 50.000 0.00 0.00 0.00 4.00
565 647 4.104738 TGGAATTTGATGGATAGAGGTCCC 59.895 45.833 0.00 0.00 37.48 4.46
585 690 0.255890 TGTTCTCTTATGCTGCCCCC 59.744 55.000 0.00 0.00 0.00 5.40
606 711 4.475944 CCCTTTTGCAATTAGTTGTCTCG 58.524 43.478 0.00 0.00 37.65 4.04
616 721 0.320247 AGTTGTCTCGGCTGAGCAAG 60.320 55.000 23.90 2.97 42.26 4.01
621 726 3.672295 CTCGGCTGAGCAAGTCCCC 62.672 68.421 10.21 0.00 34.96 4.81
623 728 2.436109 GGCTGAGCAAGTCCCCAA 59.564 61.111 6.82 0.00 0.00 4.12
645 750 6.018425 CCAACTTAATCCGTGATGAATCTCAG 60.018 42.308 0.00 0.00 0.00 3.35
646 751 5.605534 ACTTAATCCGTGATGAATCTCAGG 58.394 41.667 0.00 0.00 0.00 3.86
647 752 2.540265 ATCCGTGATGAATCTCAGGC 57.460 50.000 0.00 0.00 31.32 4.85
649 754 0.467384 CCGTGATGAATCTCAGGCCT 59.533 55.000 0.00 0.00 31.32 5.19
650 755 1.579698 CGTGATGAATCTCAGGCCTG 58.420 55.000 27.87 27.87 0.00 4.85
651 756 1.809271 CGTGATGAATCTCAGGCCTGG 60.809 57.143 32.23 22.04 0.00 4.45
652 757 1.211457 GTGATGAATCTCAGGCCTGGT 59.789 52.381 32.23 15.99 0.00 4.00
653 758 2.435805 GTGATGAATCTCAGGCCTGGTA 59.564 50.000 32.23 20.52 0.00 3.25
654 759 2.435805 TGATGAATCTCAGGCCTGGTAC 59.564 50.000 32.23 18.42 0.00 3.34
655 760 1.951209 TGAATCTCAGGCCTGGTACA 58.049 50.000 32.23 20.55 0.00 2.90
656 761 2.265367 TGAATCTCAGGCCTGGTACAA 58.735 47.619 32.23 12.04 38.70 2.41
657 762 2.846206 TGAATCTCAGGCCTGGTACAAT 59.154 45.455 32.23 15.22 38.70 2.71
658 763 3.209410 GAATCTCAGGCCTGGTACAATG 58.791 50.000 32.23 13.35 38.70 2.82
659 764 0.911769 TCTCAGGCCTGGTACAATGG 59.088 55.000 32.23 12.02 38.70 3.16
660 765 0.107017 CTCAGGCCTGGTACAATGGG 60.107 60.000 32.23 0.53 38.70 4.00
661 766 0.548926 TCAGGCCTGGTACAATGGGA 60.549 55.000 32.23 6.10 38.70 4.37
662 767 0.107017 CAGGCCTGGTACAATGGGAG 60.107 60.000 26.14 0.00 38.70 4.30
663 768 1.227383 GGCCTGGTACAATGGGAGG 59.773 63.158 0.00 0.00 38.70 4.30
664 769 1.571773 GGCCTGGTACAATGGGAGGT 61.572 60.000 0.00 0.00 38.70 3.85
665 770 0.394352 GCCTGGTACAATGGGAGGTG 60.394 60.000 0.00 0.00 38.70 4.00
666 771 0.394352 CCTGGTACAATGGGAGGTGC 60.394 60.000 0.00 0.00 38.70 5.01
667 772 0.620556 CTGGTACAATGGGAGGTGCT 59.379 55.000 0.00 0.00 38.70 4.40
668 773 1.004745 CTGGTACAATGGGAGGTGCTT 59.995 52.381 0.00 0.00 38.70 3.91
669 774 2.238646 CTGGTACAATGGGAGGTGCTTA 59.761 50.000 0.00 0.00 38.70 3.09
670 775 2.849943 TGGTACAATGGGAGGTGCTTAT 59.150 45.455 0.00 0.00 31.92 1.73
671 776 3.214328 GGTACAATGGGAGGTGCTTATG 58.786 50.000 0.00 0.00 0.00 1.90
672 777 2.442236 ACAATGGGAGGTGCTTATGG 57.558 50.000 0.00 0.00 0.00 2.74
673 778 1.063717 ACAATGGGAGGTGCTTATGGG 60.064 52.381 0.00 0.00 0.00 4.00
674 779 1.215173 CAATGGGAGGTGCTTATGGGA 59.785 52.381 0.00 0.00 0.00 4.37
675 780 1.143813 ATGGGAGGTGCTTATGGGAG 58.856 55.000 0.00 0.00 0.00 4.30
676 781 0.988145 TGGGAGGTGCTTATGGGAGG 60.988 60.000 0.00 0.00 0.00 4.30
677 782 0.988678 GGGAGGTGCTTATGGGAGGT 60.989 60.000 0.00 0.00 0.00 3.85
678 783 0.181350 GGAGGTGCTTATGGGAGGTG 59.819 60.000 0.00 0.00 0.00 4.00
679 784 0.464554 GAGGTGCTTATGGGAGGTGC 60.465 60.000 0.00 0.00 0.00 5.01
680 785 0.916358 AGGTGCTTATGGGAGGTGCT 60.916 55.000 0.00 0.00 0.00 4.40
681 786 0.034089 GGTGCTTATGGGAGGTGCTT 60.034 55.000 0.00 0.00 0.00 3.91
682 787 1.211949 GGTGCTTATGGGAGGTGCTTA 59.788 52.381 0.00 0.00 0.00 3.09
683 788 2.565841 GTGCTTATGGGAGGTGCTTAG 58.434 52.381 0.00 0.00 0.00 2.18
684 789 2.170607 GTGCTTATGGGAGGTGCTTAGA 59.829 50.000 0.00 0.00 0.00 2.10
685 790 2.435805 TGCTTATGGGAGGTGCTTAGAG 59.564 50.000 0.00 0.00 0.00 2.43
686 791 2.700897 GCTTATGGGAGGTGCTTAGAGA 59.299 50.000 0.00 0.00 0.00 3.10
687 792 3.134804 GCTTATGGGAGGTGCTTAGAGAA 59.865 47.826 0.00 0.00 0.00 2.87
688 793 4.384208 GCTTATGGGAGGTGCTTAGAGAAA 60.384 45.833 0.00 0.00 0.00 2.52
689 794 5.688766 GCTTATGGGAGGTGCTTAGAGAAAT 60.689 44.000 0.00 0.00 0.00 2.17
690 795 6.464465 GCTTATGGGAGGTGCTTAGAGAAATA 60.464 42.308 0.00 0.00 0.00 1.40
691 796 5.975988 ATGGGAGGTGCTTAGAGAAATAA 57.024 39.130 0.00 0.00 0.00 1.40
692 797 5.772393 TGGGAGGTGCTTAGAGAAATAAA 57.228 39.130 0.00 0.00 0.00 1.40
693 798 5.497474 TGGGAGGTGCTTAGAGAAATAAAC 58.503 41.667 0.00 0.00 0.00 2.01
694 799 4.882427 GGGAGGTGCTTAGAGAAATAAACC 59.118 45.833 0.00 0.00 0.00 3.27
695 800 5.497474 GGAGGTGCTTAGAGAAATAAACCA 58.503 41.667 0.00 0.00 0.00 3.67
696 801 5.944007 GGAGGTGCTTAGAGAAATAAACCAA 59.056 40.000 0.00 0.00 0.00 3.67
697 802 6.094186 GGAGGTGCTTAGAGAAATAAACCAAG 59.906 42.308 0.00 0.00 0.00 3.61
698 803 5.416013 AGGTGCTTAGAGAAATAAACCAAGC 59.584 40.000 0.00 0.00 37.89 4.01
699 804 5.416013 GGTGCTTAGAGAAATAAACCAAGCT 59.584 40.000 0.00 0.00 38.15 3.74
700 805 6.071896 GGTGCTTAGAGAAATAAACCAAGCTT 60.072 38.462 0.00 0.00 38.15 3.74
701 806 7.371159 GTGCTTAGAGAAATAAACCAAGCTTT 58.629 34.615 0.00 0.00 38.15 3.51
702 807 7.867909 GTGCTTAGAGAAATAAACCAAGCTTTT 59.132 33.333 0.00 0.00 38.15 2.27
703 808 8.082242 TGCTTAGAGAAATAAACCAAGCTTTTC 58.918 33.333 0.00 0.00 38.15 2.29
704 809 8.300286 GCTTAGAGAAATAAACCAAGCTTTTCT 58.700 33.333 6.95 6.95 38.86 2.52
709 814 8.818141 AGAAATAAACCAAGCTTTTCTTAAGC 57.182 30.769 0.00 1.38 43.31 3.09
710 815 8.421002 AGAAATAAACCAAGCTTTTCTTAAGCA 58.579 29.630 11.59 0.00 45.30 3.91
711 816 7.946655 AATAAACCAAGCTTTTCTTAAGCAC 57.053 32.000 11.59 0.00 45.30 4.40
712 817 4.322080 AACCAAGCTTTTCTTAAGCACC 57.678 40.909 11.59 0.00 45.30 5.01
713 818 2.293399 ACCAAGCTTTTCTTAAGCACCG 59.707 45.455 11.59 1.41 45.30 4.94
714 819 2.351738 CCAAGCTTTTCTTAAGCACCGG 60.352 50.000 0.00 0.00 45.30 5.28
715 820 2.271944 AGCTTTTCTTAAGCACCGGT 57.728 45.000 0.00 0.00 45.30 5.28
716 821 1.880027 AGCTTTTCTTAAGCACCGGTG 59.120 47.619 30.66 30.66 45.30 4.94
717 822 5.401241 AAGCTTTTCTTAAGCACCGGTGC 62.401 47.826 45.27 45.27 45.30 5.01
731 836 3.813166 CACCGGTGCTTATTTGTATAGGG 59.187 47.826 24.02 0.00 0.00 3.53
732 837 3.457012 ACCGGTGCTTATTTGTATAGGGT 59.543 43.478 6.12 0.00 0.00 4.34
733 838 4.655186 ACCGGTGCTTATTTGTATAGGGTA 59.345 41.667 6.12 0.00 0.00 3.69
734 839 5.221581 ACCGGTGCTTATTTGTATAGGGTAG 60.222 44.000 6.12 0.00 0.00 3.18
735 840 5.011329 CCGGTGCTTATTTGTATAGGGTAGA 59.989 44.000 0.00 0.00 0.00 2.59
736 841 5.924825 CGGTGCTTATTTGTATAGGGTAGAC 59.075 44.000 0.00 0.00 0.00 2.59
737 842 5.924825 GGTGCTTATTTGTATAGGGTAGACG 59.075 44.000 0.00 0.00 0.00 4.18
738 843 5.404667 GTGCTTATTTGTATAGGGTAGACGC 59.595 44.000 0.00 0.00 0.00 5.19
739 844 5.303589 TGCTTATTTGTATAGGGTAGACGCT 59.696 40.000 4.53 4.53 42.15 5.07
740 845 6.491062 TGCTTATTTGTATAGGGTAGACGCTA 59.509 38.462 8.69 8.69 43.94 4.26
741 846 7.028361 GCTTATTTGTATAGGGTAGACGCTAG 58.972 42.308 11.52 0.00 43.23 3.42
742 847 7.094463 GCTTATTTGTATAGGGTAGACGCTAGA 60.094 40.741 11.52 5.02 43.23 2.43
743 848 6.572167 ATTTGTATAGGGTAGACGCTAGAC 57.428 41.667 19.13 19.13 46.87 2.59
766 871 4.705337 CTTAACTAAGCGTCTCTCCTGT 57.295 45.455 0.00 0.00 0.00 4.00
767 872 5.814764 CTTAACTAAGCGTCTCTCCTGTA 57.185 43.478 0.00 0.00 0.00 2.74
768 873 5.812652 CTTAACTAAGCGTCTCTCCTGTAG 58.187 45.833 0.00 0.00 0.00 2.74
769 874 3.630892 ACTAAGCGTCTCTCCTGTAGA 57.369 47.619 0.00 0.00 0.00 2.59
770 875 3.952931 ACTAAGCGTCTCTCCTGTAGAA 58.047 45.455 0.00 0.00 32.46 2.10
771 876 4.333690 ACTAAGCGTCTCTCCTGTAGAAA 58.666 43.478 0.00 0.00 32.46 2.52
772 877 4.951094 ACTAAGCGTCTCTCCTGTAGAAAT 59.049 41.667 0.00 0.00 32.46 2.17
773 878 6.120905 ACTAAGCGTCTCTCCTGTAGAAATA 58.879 40.000 0.00 0.00 32.46 1.40
774 879 5.508200 AAGCGTCTCTCCTGTAGAAATAG 57.492 43.478 0.00 0.00 32.46 1.73
775 880 3.886505 AGCGTCTCTCCTGTAGAAATAGG 59.113 47.826 0.00 0.00 35.36 2.57
776 881 3.551250 GCGTCTCTCCTGTAGAAATAGGC 60.551 52.174 0.00 0.00 34.08 3.93
777 882 3.632604 CGTCTCTCCTGTAGAAATAGGCA 59.367 47.826 0.00 0.00 34.08 4.75
778 883 4.498345 CGTCTCTCCTGTAGAAATAGGCAC 60.498 50.000 0.00 0.00 34.08 5.01
779 884 3.961408 TCTCTCCTGTAGAAATAGGCACC 59.039 47.826 0.00 0.00 34.08 5.01
780 885 2.693591 TCTCCTGTAGAAATAGGCACCG 59.306 50.000 0.00 0.00 34.08 4.94
781 886 1.760613 TCCTGTAGAAATAGGCACCGG 59.239 52.381 0.00 0.00 34.08 5.28
782 887 1.485066 CCTGTAGAAATAGGCACCGGT 59.515 52.381 0.00 0.00 0.00 5.28
783 888 2.550978 CTGTAGAAATAGGCACCGGTG 58.449 52.381 30.66 30.66 0.00 4.94
795 900 2.681152 CACCGGTGCTACAGAAAAAC 57.319 50.000 24.02 0.00 0.00 2.43
796 901 2.218603 CACCGGTGCTACAGAAAAACT 58.781 47.619 24.02 0.00 0.00 2.66
797 902 2.223377 CACCGGTGCTACAGAAAAACTC 59.777 50.000 24.02 0.00 0.00 3.01
798 903 1.459592 CCGGTGCTACAGAAAAACTCG 59.540 52.381 0.00 0.00 0.00 4.18
799 904 1.459592 CGGTGCTACAGAAAAACTCGG 59.540 52.381 0.00 0.00 0.00 4.63
800 905 2.490991 GGTGCTACAGAAAAACTCGGT 58.509 47.619 0.00 0.00 36.37 4.69
801 906 2.876550 GGTGCTACAGAAAAACTCGGTT 59.123 45.455 0.00 0.00 34.07 4.44
802 907 3.314357 GGTGCTACAGAAAAACTCGGTTT 59.686 43.478 0.00 0.00 37.34 3.27
803 908 4.512571 GGTGCTACAGAAAAACTCGGTTTA 59.487 41.667 3.01 0.00 34.43 2.01
804 909 5.180680 GGTGCTACAGAAAAACTCGGTTTAT 59.819 40.000 3.01 0.00 34.43 1.40
805 910 6.293790 GGTGCTACAGAAAAACTCGGTTTATT 60.294 38.462 3.01 1.51 34.43 1.40
806 911 6.795593 GTGCTACAGAAAAACTCGGTTTATTC 59.204 38.462 3.01 8.40 34.43 1.75
807 912 6.708949 TGCTACAGAAAAACTCGGTTTATTCT 59.291 34.615 13.95 13.95 34.43 2.40
808 913 7.227910 TGCTACAGAAAAACTCGGTTTATTCTT 59.772 33.333 15.46 12.32 34.43 2.52
809 914 7.745155 GCTACAGAAAAACTCGGTTTATTCTTC 59.255 37.037 15.46 10.65 34.43 2.87
810 915 7.803279 ACAGAAAAACTCGGTTTATTCTTCT 57.197 32.000 15.46 11.93 34.43 2.85
811 916 8.897872 ACAGAAAAACTCGGTTTATTCTTCTA 57.102 30.769 15.46 0.00 34.43 2.10
812 917 9.333724 ACAGAAAAACTCGGTTTATTCTTCTAA 57.666 29.630 15.46 0.00 34.43 2.10
813 918 9.813080 CAGAAAAACTCGGTTTATTCTTCTAAG 57.187 33.333 15.46 0.00 34.43 2.18
814 919 8.504815 AGAAAAACTCGGTTTATTCTTCTAAGC 58.495 33.333 10.10 0.00 34.43 3.09
815 920 7.739498 AAAACTCGGTTTATTCTTCTAAGCA 57.261 32.000 3.01 0.00 34.43 3.91
816 921 6.723131 AACTCGGTTTATTCTTCTAAGCAC 57.277 37.500 0.00 0.00 0.00 4.40
817 922 5.176592 ACTCGGTTTATTCTTCTAAGCACC 58.823 41.667 0.00 0.00 0.00 5.01
818 923 5.046520 ACTCGGTTTATTCTTCTAAGCACCT 60.047 40.000 0.00 0.00 0.00 4.00
819 924 5.416947 TCGGTTTATTCTTCTAAGCACCTC 58.583 41.667 0.00 0.00 0.00 3.85
820 925 4.571176 CGGTTTATTCTTCTAAGCACCTCC 59.429 45.833 0.00 0.00 0.00 4.30
821 926 5.627040 CGGTTTATTCTTCTAAGCACCTCCT 60.627 44.000 0.00 0.00 0.00 3.69
822 927 6.181190 GGTTTATTCTTCTAAGCACCTCCTT 58.819 40.000 0.00 0.00 0.00 3.36
823 928 7.336396 GGTTTATTCTTCTAAGCACCTCCTTA 58.664 38.462 0.00 0.00 0.00 2.69
824 929 7.827729 GGTTTATTCTTCTAAGCACCTCCTTAA 59.172 37.037 0.00 0.00 0.00 1.85
825 930 8.884726 GTTTATTCTTCTAAGCACCTCCTTAAG 58.115 37.037 0.00 0.00 0.00 1.85
826 931 4.473477 TCTTCTAAGCACCTCCTTAAGC 57.527 45.455 0.00 0.00 0.00 3.09
827 932 3.838317 TCTTCTAAGCACCTCCTTAAGCA 59.162 43.478 0.00 0.00 0.00 3.91
828 933 3.611766 TCTAAGCACCTCCTTAAGCAC 57.388 47.619 0.00 0.00 0.00 4.40
829 934 2.236395 TCTAAGCACCTCCTTAAGCACC 59.764 50.000 0.00 0.00 0.00 5.01
830 935 1.068121 AAGCACCTCCTTAAGCACCT 58.932 50.000 0.00 0.00 0.00 4.00
831 936 0.615850 AGCACCTCCTTAAGCACCTC 59.384 55.000 0.00 0.00 0.00 3.85
832 937 0.393132 GCACCTCCTTAAGCACCTCC 60.393 60.000 0.00 0.00 0.00 4.30
833 938 0.253327 CACCTCCTTAAGCACCTCCC 59.747 60.000 0.00 0.00 0.00 4.30
834 939 0.178873 ACCTCCTTAAGCACCTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
835 940 1.216990 CCTCCTTAAGCACCTCCCAT 58.783 55.000 0.00 0.00 0.00 4.00
836 941 1.566231 CCTCCTTAAGCACCTCCCATT 59.434 52.381 0.00 0.00 0.00 3.16
837 942 2.648059 CTCCTTAAGCACCTCCCATTG 58.352 52.381 0.00 0.00 0.00 2.82
838 943 1.992557 TCCTTAAGCACCTCCCATTGT 59.007 47.619 0.00 0.00 0.00 2.71
839 944 3.186283 TCCTTAAGCACCTCCCATTGTA 58.814 45.455 0.00 0.00 0.00 2.41
840 945 3.054655 TCCTTAAGCACCTCCCATTGTAC 60.055 47.826 0.00 0.00 0.00 2.90
841 946 3.308117 CCTTAAGCACCTCCCATTGTACA 60.308 47.826 0.00 0.00 0.00 2.90
842 947 2.969821 AAGCACCTCCCATTGTACAA 57.030 45.000 11.41 11.41 0.00 2.41
843 948 2.496899 AGCACCTCCCATTGTACAAG 57.503 50.000 14.65 6.30 0.00 3.16
844 949 1.004745 AGCACCTCCCATTGTACAAGG 59.995 52.381 14.65 13.92 0.00 3.61
845 950 1.463674 CACCTCCCATTGTACAAGGC 58.536 55.000 14.66 0.00 0.00 4.35
846 951 0.331616 ACCTCCCATTGTACAAGGCC 59.668 55.000 14.66 0.00 0.00 5.19
847 952 0.625849 CCTCCCATTGTACAAGGCCT 59.374 55.000 14.66 0.00 0.00 5.19
848 953 1.408822 CCTCCCATTGTACAAGGCCTC 60.409 57.143 14.66 0.00 0.00 4.70
849 954 1.281867 CTCCCATTGTACAAGGCCTCA 59.718 52.381 14.66 0.00 0.00 3.86
850 955 1.004277 TCCCATTGTACAAGGCCTCAC 59.996 52.381 14.66 5.33 0.00 3.51
851 956 1.271871 CCCATTGTACAAGGCCTCACA 60.272 52.381 14.66 8.34 0.00 3.58
852 957 2.086869 CCATTGTACAAGGCCTCACAG 58.913 52.381 14.66 0.00 0.00 3.66
853 958 2.290260 CCATTGTACAAGGCCTCACAGA 60.290 50.000 14.66 2.97 0.00 3.41
893 998 3.438434 TCATGATTTCGTGCGATTTTCCA 59.562 39.130 0.00 0.00 33.05 3.53
894 999 3.469899 TGATTTCGTGCGATTTTCCAG 57.530 42.857 0.00 0.00 0.00 3.86
915 1020 5.649395 CCAGTCACACATAGGATTCACAATT 59.351 40.000 0.00 0.00 0.00 2.32
922 1027 4.881850 ACATAGGATTCACAATTCCCGTTC 59.118 41.667 0.00 0.00 0.00 3.95
929 1034 2.882137 TCACAATTCCCGTTCCTTTGTC 59.118 45.455 0.00 0.00 0.00 3.18
930 1035 2.030274 CACAATTCCCGTTCCTTTGTCC 60.030 50.000 0.00 0.00 0.00 4.02
931 1036 1.544246 CAATTCCCGTTCCTTTGTCCC 59.456 52.381 0.00 0.00 0.00 4.46
952 1057 6.374613 GTCCCTCGAAATTTATCCTCAGTTTT 59.625 38.462 0.00 0.00 0.00 2.43
953 1058 6.374333 TCCCTCGAAATTTATCCTCAGTTTTG 59.626 38.462 0.00 0.00 0.00 2.44
955 1060 5.627172 TCGAAATTTATCCTCAGTTTTGCG 58.373 37.500 0.00 0.00 0.00 4.85
1043 1148 5.055265 TGTTTCTCTGAATAACCCAACCA 57.945 39.130 0.00 0.00 0.00 3.67
1045 1150 5.476599 TGTTTCTCTGAATAACCCAACCATG 59.523 40.000 0.00 0.00 0.00 3.66
1047 1152 5.255397 TCTCTGAATAACCCAACCATGTT 57.745 39.130 0.00 0.00 0.00 2.71
1048 1153 5.640147 TCTCTGAATAACCCAACCATGTTT 58.360 37.500 0.00 0.00 0.00 2.83
1049 1154 6.074648 TCTCTGAATAACCCAACCATGTTTT 58.925 36.000 0.00 0.00 0.00 2.43
1050 1155 7.235079 TCTCTGAATAACCCAACCATGTTTTA 58.765 34.615 0.00 0.00 0.00 1.52
1051 1156 7.726291 TCTCTGAATAACCCAACCATGTTTTAA 59.274 33.333 0.00 0.00 0.00 1.52
1052 1157 8.429237 TCTGAATAACCCAACCATGTTTTAAT 57.571 30.769 0.00 0.00 0.00 1.40
1101 1210 2.016704 GCGTCGTCACACCACTGAG 61.017 63.158 0.00 0.00 0.00 3.35
1524 1633 4.941609 CTGGACAACAGGATCGGG 57.058 61.111 0.00 0.00 43.70 5.14
1629 1738 2.670148 GGACCTCCTGGCCACGAAT 61.670 63.158 0.00 0.00 36.63 3.34
1756 1865 1.404843 GAGGAGGATACGGTGCTTCT 58.595 55.000 0.00 0.00 36.71 2.85
1883 2000 4.469657 ACAACCCAACTGAATTCTGCTTA 58.530 39.130 11.86 0.00 0.00 3.09
1929 2046 5.859205 AATTACAGGATGATTTTCTGCCC 57.141 39.130 0.00 0.00 39.69 5.36
1945 2062 2.046314 CCCGCACCGACATTCCTT 60.046 61.111 0.00 0.00 0.00 3.36
2027 2148 2.089980 CTTGCAGGGGTTCATTCTCTG 58.910 52.381 0.00 0.00 0.00 3.35
2111 2238 2.229784 CCTTCTGTGTGGAAATTGCCTC 59.770 50.000 3.49 0.00 0.00 4.70
2117 2244 2.099756 GTGTGGAAATTGCCTCATAGCC 59.900 50.000 10.44 0.00 34.34 3.93
2123 2250 2.742428 ATTGCCTCATAGCCACATGT 57.258 45.000 0.00 0.00 0.00 3.21
2162 2289 0.820226 TGAGAGATCCAAGGCGTCTG 59.180 55.000 0.00 0.00 0.00 3.51
2223 2351 7.396540 AAGCCTTTCAGGTAGTATGATTTTG 57.603 36.000 0.00 0.00 37.80 2.44
2232 2360 5.072600 AGGTAGTATGATTTTGCCGGGAATA 59.927 40.000 10.01 4.99 0.00 1.75
2238 2366 7.926018 AGTATGATTTTGCCGGGAATATTTTTC 59.074 33.333 10.01 0.00 0.00 2.29
2249 2377 6.643360 CCGGGAATATTTTTCGTGAAGTTTTT 59.357 34.615 0.00 0.00 0.00 1.94
2260 2388 9.724839 TTTTCGTGAAGTTTTTCCTACAAATAG 57.275 29.630 0.00 0.00 32.09 1.73
2304 2622 9.905713 ATTAGCTTATGTTTACCAGAGAAATGA 57.094 29.630 0.00 0.00 0.00 2.57
2307 2625 6.914757 GCTTATGTTTACCAGAGAAATGATGC 59.085 38.462 0.00 0.00 0.00 3.91
2313 2631 1.948145 CCAGAGAAATGATGCAGAGGC 59.052 52.381 0.00 0.00 41.68 4.70
2319 2637 2.923634 AATGATGCAGAGGCCCTGGC 62.924 60.000 19.15 12.20 43.13 4.85
2331 2649 3.721706 CCTGGCCTCCTGGGTGAC 61.722 72.222 3.32 0.00 38.71 3.67
2332 2650 2.608988 CTGGCCTCCTGGGTGACT 60.609 66.667 3.32 0.00 37.43 3.41
2333 2651 2.121963 TGGCCTCCTGGGTGACTT 60.122 61.111 3.32 0.00 37.43 3.01
2334 2652 2.190488 CTGGCCTCCTGGGTGACTTC 62.190 65.000 3.32 0.00 37.43 3.01
2335 2653 2.224159 GGCCTCCTGGGTGACTTCA 61.224 63.158 0.00 0.00 37.43 3.02
2352 2670 8.027189 GGTGACTTCAGTTTTAGTTTTTCTTGT 58.973 33.333 0.00 0.00 0.00 3.16
2371 2689 8.770438 TTCTTGTTTGGATTTATAACATTGGC 57.230 30.769 0.00 0.00 32.39 4.52
2464 2789 2.356432 CCAGTGGATGGCAGATTTGAGA 60.356 50.000 1.68 0.00 43.83 3.27
2538 2863 1.298667 GGAAGCCCAAAGAGCGGTA 59.701 57.895 0.00 0.00 34.64 4.02
2570 2895 4.399934 CCTACGCCTATCCTCCTCTTATTC 59.600 50.000 0.00 0.00 0.00 1.75
2585 2910 7.453393 TCCTCTTATTCAGTTATTGCCCATAG 58.547 38.462 0.00 0.00 0.00 2.23
2634 2989 5.596836 ATCAAGGCTGAAGTTTCAAAACA 57.403 34.783 8.23 0.00 35.95 2.83
2638 2993 7.725251 TCAAGGCTGAAGTTTCAAAACATAAT 58.275 30.769 8.23 0.00 41.30 1.28
2639 2994 8.203485 TCAAGGCTGAAGTTTCAAAACATAATT 58.797 29.630 8.23 0.00 41.30 1.40
2640 2995 7.951530 AGGCTGAAGTTTCAAAACATAATTG 57.048 32.000 8.23 0.00 41.30 2.32
2678 3034 1.093159 GGCACCTTCTTCAGCATCAG 58.907 55.000 0.00 0.00 0.00 2.90
2696 3052 2.023984 TCAGCCCTTCTCCATCACTAGA 60.024 50.000 0.00 0.00 0.00 2.43
2733 3090 6.776116 TCTTCAGGTCTTTGTCTGTAGAGTTA 59.224 38.462 0.00 0.00 34.20 2.24
2736 3093 7.229308 TCAGGTCTTTGTCTGTAGAGTTACTA 58.771 38.462 0.00 0.00 33.13 1.82
2739 3096 7.889073 AGGTCTTTGTCTGTAGAGTTACTATGA 59.111 37.037 0.00 0.00 33.39 2.15
2740 3097 8.688151 GGTCTTTGTCTGTAGAGTTACTATGAT 58.312 37.037 0.00 0.00 33.39 2.45
2741 3098 9.509855 GTCTTTGTCTGTAGAGTTACTATGATG 57.490 37.037 0.00 0.00 33.39 3.07
2742 3099 8.191446 TCTTTGTCTGTAGAGTTACTATGATGC 58.809 37.037 0.00 0.00 33.39 3.91
2743 3100 6.392625 TGTCTGTAGAGTTACTATGATGCC 57.607 41.667 0.00 0.00 33.39 4.40
2744 3101 5.302059 TGTCTGTAGAGTTACTATGATGCCC 59.698 44.000 0.00 0.00 33.39 5.36
2745 3102 5.302059 GTCTGTAGAGTTACTATGATGCCCA 59.698 44.000 0.00 0.00 33.39 5.36
2746 3103 5.897250 TCTGTAGAGTTACTATGATGCCCAA 59.103 40.000 0.00 0.00 33.39 4.12
2747 3104 6.554982 TCTGTAGAGTTACTATGATGCCCAAT 59.445 38.462 0.00 0.00 33.39 3.16
2748 3105 7.071196 TCTGTAGAGTTACTATGATGCCCAATT 59.929 37.037 0.00 0.00 33.39 2.32
2749 3106 6.992123 TGTAGAGTTACTATGATGCCCAATTG 59.008 38.462 0.00 0.00 33.39 2.32
2750 3107 6.006275 AGAGTTACTATGATGCCCAATTGT 57.994 37.500 4.43 0.00 0.00 2.71
2751 3108 7.136822 AGAGTTACTATGATGCCCAATTGTA 57.863 36.000 4.43 0.00 0.00 2.41
2752 3109 6.992715 AGAGTTACTATGATGCCCAATTGTAC 59.007 38.462 4.43 0.00 0.00 2.90
2753 3110 6.658849 AGTTACTATGATGCCCAATTGTACA 58.341 36.000 4.43 2.33 0.00 2.90
2778 3135 5.281693 GCACAAATTGCCTACAAAATTCC 57.718 39.130 0.00 0.00 46.63 3.01
2779 3136 4.996758 GCACAAATTGCCTACAAAATTCCT 59.003 37.500 0.00 0.00 46.63 3.36
2782 3139 6.147656 CACAAATTGCCTACAAAATTCCTTCC 59.852 38.462 0.00 0.00 39.77 3.46
2787 3144 3.948473 GCCTACAAAATTCCTTCCTCCTC 59.052 47.826 0.00 0.00 0.00 3.71
2789 3146 5.760131 CCTACAAAATTCCTTCCTCCTCAT 58.240 41.667 0.00 0.00 0.00 2.90
2828 3185 4.080638 GGAGAATGAGAGGACCATGAAAGT 60.081 45.833 0.00 0.00 0.00 2.66
2878 3235 2.885644 CGGCGACAAGGGATCACG 60.886 66.667 0.00 0.00 0.00 4.35
2879 3236 2.511600 GGCGACAAGGGATCACGG 60.512 66.667 0.00 0.00 0.00 4.94
2934 3291 1.080434 GCTAGGGATCGCGGATGTC 60.080 63.158 6.13 0.00 0.00 3.06
2988 3345 1.201429 ATGCAAACCCCGAGGAGAGT 61.201 55.000 0.00 0.00 36.73 3.24
2994 3351 2.043450 CCCGAGGAGAGTGAGGCT 60.043 66.667 0.00 0.00 0.00 4.58
3048 3405 3.154827 ACGGTTTGGAATGAGTGGATT 57.845 42.857 0.00 0.00 0.00 3.01
3102 3463 1.275666 TGGTTCCACGGAGATGATGT 58.724 50.000 0.00 0.00 0.00 3.06
3110 3471 2.421073 CACGGAGATGATGTTGCATGTT 59.579 45.455 0.00 0.00 0.00 2.71
3170 3531 3.131396 CAGGCATACGGTTCTTGGTATC 58.869 50.000 0.00 0.00 0.00 2.24
3189 3550 0.670239 CCAGTGCATGCTGTCACGTA 60.670 55.000 20.33 0.00 38.19 3.57
3220 4845 4.195416 TGTTTTGGAAACCTTGAAATGGC 58.805 39.130 1.53 0.00 33.71 4.40
3256 4881 3.181487 GCAATCGTTGATGTAGGCCAAAT 60.181 43.478 5.01 0.00 0.00 2.32
3325 4950 7.071698 ACATTGGATCTAGAGAAAGCAGGATTA 59.928 37.037 0.00 0.00 0.00 1.75
3341 4966 9.975218 AAGCAGGATTATTTTAGGAGAAAAGTA 57.025 29.630 0.00 0.00 0.00 2.24
3366 4991 2.529780 TTTTTCGAGTAACCGGCAGA 57.470 45.000 0.00 0.00 0.00 4.26
3375 5070 2.463589 TAACCGGCAGAAGCACTGGG 62.464 60.000 0.00 8.27 45.82 4.45
3377 5072 2.743928 CGGCAGAAGCACTGGGTC 60.744 66.667 11.72 0.00 45.82 4.46
3473 6482 2.917933 TCCAACAGTGAACTTGTCCTG 58.082 47.619 0.00 0.00 33.26 3.86
3504 6513 9.135189 CCAATTGGAATATTTCTGAATAGGTGA 57.865 33.333 20.50 0.00 37.39 4.02
3549 6559 1.429930 TCTTGTTAGGCCACTGTCCA 58.570 50.000 5.01 0.00 0.00 4.02
3632 6738 6.825213 ACCCGGGATTACTTGTAGTTTAAATC 59.175 38.462 32.02 0.00 0.00 2.17
3633 6739 6.824704 CCCGGGATTACTTGTAGTTTAAATCA 59.175 38.462 18.48 0.00 27.59 2.57
3654 6760 4.096682 TCACCCAAACTTAAACCACTTTCG 59.903 41.667 0.00 0.00 0.00 3.46
3721 6827 2.875296 TCACTGCCCTTATGCAACTTT 58.125 42.857 0.00 0.00 41.51 2.66
3723 6829 1.895131 ACTGCCCTTATGCAACTTTGG 59.105 47.619 0.00 0.00 41.51 3.28
3821 6929 7.116805 GGTCATGTTGATCTTCAAATTCCAAAC 59.883 37.037 0.00 0.00 38.22 2.93
3843 6951 3.086818 TGCAATGAAATCATGGATGCG 57.913 42.857 11.74 0.00 39.30 4.73
3854 6962 3.332034 TCATGGATGCGATGCTTCTATG 58.668 45.455 18.58 18.58 45.64 2.23
3878 6986 8.766000 TGAATGTGTCGTGTAATATTTGTAGT 57.234 30.769 0.00 0.00 0.00 2.73
3991 7107 0.249699 CTGCACGTCCCAGTACAACA 60.250 55.000 0.00 0.00 0.00 3.33
3992 7108 0.178301 TGCACGTCCCAGTACAACAA 59.822 50.000 0.00 0.00 0.00 2.83
3993 7109 0.584876 GCACGTCCCAGTACAACAAC 59.415 55.000 0.00 0.00 0.00 3.32
4025 7141 1.353091 AAATAAAAAGGCCGGCCCAA 58.647 45.000 41.72 22.56 36.58 4.12
4106 7222 9.434275 AAATACATAAAAATCTAAAGGGGAGGG 57.566 33.333 0.00 0.00 0.00 4.30
4107 7223 5.777449 ACATAAAAATCTAAAGGGGAGGGG 58.223 41.667 0.00 0.00 0.00 4.79
4108 7224 3.776731 AAAAATCTAAAGGGGAGGGGG 57.223 47.619 0.00 0.00 0.00 5.40
4126 7242 3.451402 GGGGGAGCGGGATATAAAAAT 57.549 47.619 0.00 0.00 0.00 1.82
4138 7255 7.307514 GCGGGATATAAAAATATCGTGTTGTGA 60.308 37.037 0.00 0.00 35.03 3.58
4151 7268 2.358898 GTGTTGTGACAACATTGAGGCT 59.641 45.455 30.77 0.00 37.57 4.58
4154 7271 2.653726 TGTGACAACATTGAGGCTTGT 58.346 42.857 0.00 0.00 0.00 3.16
4165 7282 4.871871 TTGAGGCTTGTATTTGGGGATA 57.128 40.909 0.00 0.00 0.00 2.59
4171 7288 1.513858 TGTATTTGGGGATAGGCCGT 58.486 50.000 0.00 0.00 37.63 5.68
4172 7289 1.847737 TGTATTTGGGGATAGGCCGTT 59.152 47.619 0.00 0.00 37.63 4.44
4173 7290 2.227194 GTATTTGGGGATAGGCCGTTG 58.773 52.381 0.00 0.00 37.63 4.10
4174 7291 0.629058 ATTTGGGGATAGGCCGTTGT 59.371 50.000 0.00 0.00 37.63 3.32
4175 7292 0.034863 TTTGGGGATAGGCCGTTGTC 60.035 55.000 0.00 0.00 37.63 3.18
4176 7293 2.108362 GGGGATAGGCCGTTGTCG 59.892 66.667 0.00 0.00 37.63 4.35
4177 7294 2.728435 GGGGATAGGCCGTTGTCGT 61.728 63.158 0.00 0.00 37.63 4.34
4178 7295 1.394266 GGGGATAGGCCGTTGTCGTA 61.394 60.000 0.00 0.00 37.63 3.43
4179 7296 0.031721 GGGATAGGCCGTTGTCGTAG 59.968 60.000 0.00 0.00 37.63 3.51
4180 7297 0.743097 GGATAGGCCGTTGTCGTAGT 59.257 55.000 0.00 0.00 35.01 2.73
4181 7298 1.268948 GGATAGGCCGTTGTCGTAGTC 60.269 57.143 0.00 0.00 35.01 2.59
4182 7299 0.743097 ATAGGCCGTTGTCGTAGTCC 59.257 55.000 0.00 0.00 35.01 3.85
4183 7300 0.322816 TAGGCCGTTGTCGTAGTCCT 60.323 55.000 0.00 0.00 35.01 3.85
4184 7301 0.322816 AGGCCGTTGTCGTAGTCCTA 60.323 55.000 0.00 0.00 35.01 2.94
4185 7302 0.527565 GGCCGTTGTCGTAGTCCTAA 59.472 55.000 0.00 0.00 35.01 2.69
4186 7303 1.468736 GGCCGTTGTCGTAGTCCTAAG 60.469 57.143 0.00 0.00 35.01 2.18
4187 7304 1.470098 GCCGTTGTCGTAGTCCTAAGA 59.530 52.381 0.00 0.00 35.01 2.10
4188 7305 2.730402 GCCGTTGTCGTAGTCCTAAGAC 60.730 54.545 11.84 11.84 42.32 3.01
4202 7319 5.897050 GTCCTAAGACTGACAGTAGAATGG 58.103 45.833 8.41 7.78 40.10 3.16
4203 7320 4.956700 TCCTAAGACTGACAGTAGAATGGG 59.043 45.833 8.41 6.76 0.00 4.00
4204 7321 4.100189 CCTAAGACTGACAGTAGAATGGGG 59.900 50.000 8.41 1.56 0.00 4.96
4205 7322 2.472029 AGACTGACAGTAGAATGGGGG 58.528 52.381 8.41 0.00 0.00 5.40
4206 7323 2.044492 AGACTGACAGTAGAATGGGGGA 59.956 50.000 8.41 0.00 0.00 4.81
4207 7324 3.041946 GACTGACAGTAGAATGGGGGAT 58.958 50.000 8.41 0.00 0.00 3.85
4208 7325 4.078571 AGACTGACAGTAGAATGGGGGATA 60.079 45.833 8.41 0.00 0.00 2.59
4209 7326 4.227197 ACTGACAGTAGAATGGGGGATAG 58.773 47.826 6.24 0.00 0.00 2.08
4210 7327 3.580458 CTGACAGTAGAATGGGGGATAGG 59.420 52.174 0.00 0.00 0.00 2.57
4211 7328 3.051341 TGACAGTAGAATGGGGGATAGGT 60.051 47.826 0.00 0.00 0.00 3.08
4212 7329 4.171243 TGACAGTAGAATGGGGGATAGGTA 59.829 45.833 0.00 0.00 0.00 3.08
4213 7330 5.162760 TGACAGTAGAATGGGGGATAGGTAT 60.163 44.000 0.00 0.00 0.00 2.73
4214 7331 5.094387 ACAGTAGAATGGGGGATAGGTATG 58.906 45.833 0.00 0.00 0.00 2.39
4215 7332 5.162760 ACAGTAGAATGGGGGATAGGTATGA 60.163 44.000 0.00 0.00 0.00 2.15
4216 7333 5.785423 CAGTAGAATGGGGGATAGGTATGAA 59.215 44.000 0.00 0.00 0.00 2.57
4217 7334 6.026186 AGTAGAATGGGGGATAGGTATGAAG 58.974 44.000 0.00 0.00 0.00 3.02
4218 7335 5.106631 AGAATGGGGGATAGGTATGAAGA 57.893 43.478 0.00 0.00 0.00 2.87
4219 7336 5.097234 AGAATGGGGGATAGGTATGAAGAG 58.903 45.833 0.00 0.00 0.00 2.85
4220 7337 3.275848 TGGGGGATAGGTATGAAGAGG 57.724 52.381 0.00 0.00 0.00 3.69
4221 7338 1.909986 GGGGGATAGGTATGAAGAGGC 59.090 57.143 0.00 0.00 0.00 4.70
4222 7339 2.621070 GGGGATAGGTATGAAGAGGCA 58.379 52.381 0.00 0.00 0.00 4.75
4223 7340 2.979678 GGGGATAGGTATGAAGAGGCAA 59.020 50.000 0.00 0.00 0.00 4.52
4224 7341 3.008485 GGGGATAGGTATGAAGAGGCAAG 59.992 52.174 0.00 0.00 0.00 4.01
4225 7342 3.904339 GGGATAGGTATGAAGAGGCAAGA 59.096 47.826 0.00 0.00 0.00 3.02
4226 7343 4.534103 GGGATAGGTATGAAGAGGCAAGAT 59.466 45.833 0.00 0.00 0.00 2.40
4227 7344 5.337975 GGGATAGGTATGAAGAGGCAAGATC 60.338 48.000 0.00 0.00 0.00 2.75
4228 7345 5.247110 GGATAGGTATGAAGAGGCAAGATCA 59.753 44.000 0.00 0.00 0.00 2.92
4229 7346 4.686191 AGGTATGAAGAGGCAAGATCAG 57.314 45.455 0.00 0.00 0.00 2.90
4230 7347 3.137533 GGTATGAAGAGGCAAGATCAGC 58.862 50.000 0.00 0.00 0.00 4.26
4238 7355 3.179925 GCAAGATCAGCCATGGTGA 57.820 52.632 14.67 15.60 44.17 4.02
4239 7356 1.466856 GCAAGATCAGCCATGGTGAA 58.533 50.000 14.67 0.00 43.29 3.18
4240 7357 1.404391 GCAAGATCAGCCATGGTGAAG 59.596 52.381 14.67 8.70 43.29 3.02
4241 7358 2.719739 CAAGATCAGCCATGGTGAAGT 58.280 47.619 14.67 2.16 43.29 3.01
4242 7359 3.087031 CAAGATCAGCCATGGTGAAGTT 58.913 45.455 14.67 10.21 43.29 2.66
4243 7360 2.719739 AGATCAGCCATGGTGAAGTTG 58.280 47.619 14.67 3.19 43.29 3.16
4244 7361 2.040813 AGATCAGCCATGGTGAAGTTGT 59.959 45.455 14.67 0.75 43.29 3.32
4245 7362 3.264193 AGATCAGCCATGGTGAAGTTGTA 59.736 43.478 14.67 0.00 43.29 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 146 3.955771 TGTCGCTTTGTTTGTAACCTC 57.044 42.857 0.00 0.00 0.00 3.85
123 149 3.728718 CCACATGTCGCTTTGTTTGTAAC 59.271 43.478 0.00 0.00 0.00 2.50
194 223 1.290134 AGTCAAAGAGGGGGATCACC 58.710 55.000 5.01 5.01 39.11 4.02
265 295 4.327680 ACCAGATGCAACTACCTTTCTTC 58.672 43.478 0.00 0.00 0.00 2.87
277 307 2.125552 CGGCGAGACCAGATGCAA 60.126 61.111 0.00 0.00 39.03 4.08
313 343 3.371063 TCGGTCACTCTCGGGCAC 61.371 66.667 0.00 0.00 0.00 5.01
314 344 3.371063 GTCGGTCACTCTCGGGCA 61.371 66.667 0.00 0.00 0.00 5.36
315 345 4.131088 GGTCGGTCACTCTCGGGC 62.131 72.222 0.00 0.00 0.00 6.13
316 346 3.812019 CGGTCGGTCACTCTCGGG 61.812 72.222 0.00 0.00 0.00 5.14
317 347 3.812019 CCGGTCGGTCACTCTCGG 61.812 72.222 0.55 0.00 0.00 4.63
318 348 3.812019 CCCGGTCGGTCACTCTCG 61.812 72.222 8.67 0.00 0.00 4.04
319 349 4.131088 GCCCGGTCGGTCACTCTC 62.131 72.222 8.67 0.00 0.00 3.20
372 422 6.715280 AGACATCTTGTTACCTTGATGATGT 58.285 36.000 13.22 0.00 43.50 3.06
374 424 7.397221 TGAAGACATCTTGTTACCTTGATGAT 58.603 34.615 13.22 3.03 39.44 2.45
375 425 6.768483 TGAAGACATCTTGTTACCTTGATGA 58.232 36.000 13.22 0.00 39.44 2.92
376 426 6.652481 ACTGAAGACATCTTGTTACCTTGATG 59.348 38.462 0.00 0.00 41.24 3.07
377 427 6.773638 ACTGAAGACATCTTGTTACCTTGAT 58.226 36.000 0.00 0.00 36.11 2.57
397 447 1.816835 ACTGAAGAATACGGCGACTGA 59.183 47.619 16.62 0.00 0.00 3.41
402 452 3.966154 ACTGATACTGAAGAATACGGCG 58.034 45.455 4.80 4.80 0.00 6.46
403 453 5.221130 GGTACTGATACTGAAGAATACGGC 58.779 45.833 0.00 0.00 0.00 5.68
425 475 1.888512 CAACAAGGGAATCAGGTGTGG 59.111 52.381 0.00 0.00 0.00 4.17
437 487 1.007387 GCAACGGAAGCAACAAGGG 60.007 57.895 0.00 0.00 0.00 3.95
443 493 3.339731 CGGAAGCAACGGAAGCAA 58.660 55.556 0.00 0.00 0.00 3.91
455 505 2.813754 TCTCTTGTTGGATTTGCGGAAG 59.186 45.455 0.00 0.00 0.00 3.46
464 541 6.715264 ACCGAAATAAACTTCTCTTGTTGGAT 59.285 34.615 0.00 0.00 0.00 3.41
496 573 7.569591 GCCGCATCTGTAAATAAGATTGTAGTC 60.570 40.741 0.00 0.00 31.92 2.59
498 575 6.202762 TGCCGCATCTGTAAATAAGATTGTAG 59.797 38.462 0.00 0.00 31.92 2.74
499 576 6.052360 TGCCGCATCTGTAAATAAGATTGTA 58.948 36.000 0.00 0.00 31.92 2.41
500 577 4.881273 TGCCGCATCTGTAAATAAGATTGT 59.119 37.500 0.00 0.00 31.92 2.71
501 578 5.422666 TGCCGCATCTGTAAATAAGATTG 57.577 39.130 0.00 0.00 31.92 2.67
502 579 4.516698 CCTGCCGCATCTGTAAATAAGATT 59.483 41.667 0.00 0.00 31.92 2.40
503 580 4.067896 CCTGCCGCATCTGTAAATAAGAT 58.932 43.478 0.00 0.00 34.66 2.40
504 581 3.466836 CCTGCCGCATCTGTAAATAAGA 58.533 45.455 0.00 0.00 0.00 2.10
505 582 2.031682 GCCTGCCGCATCTGTAAATAAG 60.032 50.000 0.00 0.00 37.47 1.73
506 583 1.946768 GCCTGCCGCATCTGTAAATAA 59.053 47.619 0.00 0.00 37.47 1.40
526 603 6.434028 TCAAATTCCAGTGTTCTATTCCCTTG 59.566 38.462 0.00 0.00 0.00 3.61
528 605 6.139679 TCAAATTCCAGTGTTCTATTCCCT 57.860 37.500 0.00 0.00 0.00 4.20
529 606 6.183360 CCATCAAATTCCAGTGTTCTATTCCC 60.183 42.308 0.00 0.00 0.00 3.97
532 609 9.347240 CTATCCATCAAATTCCAGTGTTCTATT 57.653 33.333 0.00 0.00 0.00 1.73
533 610 8.717717 TCTATCCATCAAATTCCAGTGTTCTAT 58.282 33.333 0.00 0.00 0.00 1.98
534 611 8.089625 TCTATCCATCAAATTCCAGTGTTCTA 57.910 34.615 0.00 0.00 0.00 2.10
535 612 6.962182 TCTATCCATCAAATTCCAGTGTTCT 58.038 36.000 0.00 0.00 0.00 3.01
536 613 6.261826 CCTCTATCCATCAAATTCCAGTGTTC 59.738 42.308 0.00 0.00 0.00 3.18
539 621 5.688807 ACCTCTATCCATCAAATTCCAGTG 58.311 41.667 0.00 0.00 0.00 3.66
544 626 5.163152 ACAGGGACCTCTATCCATCAAATTC 60.163 44.000 0.00 0.00 40.96 2.17
565 647 1.673168 GGGGCAGCATAAGAGAACAG 58.327 55.000 0.00 0.00 0.00 3.16
585 690 4.475944 CCGAGACAACTAATTGCAAAAGG 58.524 43.478 1.71 0.00 39.66 3.11
606 711 1.973812 GTTGGGGACTTGCTCAGCC 60.974 63.158 0.00 0.00 0.00 4.85
616 721 2.773993 TCACGGATTAAGTTGGGGAC 57.226 50.000 0.00 0.00 0.00 4.46
621 726 6.018425 CCTGAGATTCATCACGGATTAAGTTG 60.018 42.308 0.00 0.00 0.00 3.16
623 728 5.605534 CCTGAGATTCATCACGGATTAAGT 58.394 41.667 0.00 0.00 0.00 2.24
645 750 1.227383 CCTCCCATTGTACCAGGCC 59.773 63.158 0.00 0.00 0.00 5.19
646 751 0.394352 CACCTCCCATTGTACCAGGC 60.394 60.000 0.00 0.00 0.00 4.85
647 752 0.394352 GCACCTCCCATTGTACCAGG 60.394 60.000 0.00 0.00 0.00 4.45
649 754 1.072266 AAGCACCTCCCATTGTACCA 58.928 50.000 0.00 0.00 0.00 3.25
650 755 3.214328 CATAAGCACCTCCCATTGTACC 58.786 50.000 0.00 0.00 0.00 3.34
651 756 3.214328 CCATAAGCACCTCCCATTGTAC 58.786 50.000 0.00 0.00 0.00 2.90
652 757 2.174639 CCCATAAGCACCTCCCATTGTA 59.825 50.000 0.00 0.00 0.00 2.41
653 758 1.063717 CCCATAAGCACCTCCCATTGT 60.064 52.381 0.00 0.00 0.00 2.71
654 759 1.215173 TCCCATAAGCACCTCCCATTG 59.785 52.381 0.00 0.00 0.00 2.82
655 760 1.496429 CTCCCATAAGCACCTCCCATT 59.504 52.381 0.00 0.00 0.00 3.16
656 761 1.143813 CTCCCATAAGCACCTCCCAT 58.856 55.000 0.00 0.00 0.00 4.00
657 762 0.988145 CCTCCCATAAGCACCTCCCA 60.988 60.000 0.00 0.00 0.00 4.37
658 763 0.988678 ACCTCCCATAAGCACCTCCC 60.989 60.000 0.00 0.00 0.00 4.30
659 764 0.181350 CACCTCCCATAAGCACCTCC 59.819 60.000 0.00 0.00 0.00 4.30
660 765 0.464554 GCACCTCCCATAAGCACCTC 60.465 60.000 0.00 0.00 0.00 3.85
661 766 0.916358 AGCACCTCCCATAAGCACCT 60.916 55.000 0.00 0.00 0.00 4.00
662 767 0.034089 AAGCACCTCCCATAAGCACC 60.034 55.000 0.00 0.00 0.00 5.01
663 768 2.170607 TCTAAGCACCTCCCATAAGCAC 59.829 50.000 0.00 0.00 0.00 4.40
664 769 2.435805 CTCTAAGCACCTCCCATAAGCA 59.564 50.000 0.00 0.00 0.00 3.91
665 770 2.700897 TCTCTAAGCACCTCCCATAAGC 59.299 50.000 0.00 0.00 0.00 3.09
666 771 5.359194 TTTCTCTAAGCACCTCCCATAAG 57.641 43.478 0.00 0.00 0.00 1.73
667 772 5.975988 ATTTCTCTAAGCACCTCCCATAA 57.024 39.130 0.00 0.00 0.00 1.90
668 773 7.280356 GTTTATTTCTCTAAGCACCTCCCATA 58.720 38.462 0.00 0.00 0.00 2.74
669 774 5.975988 TTATTTCTCTAAGCACCTCCCAT 57.024 39.130 0.00 0.00 0.00 4.00
670 775 5.497474 GTTTATTTCTCTAAGCACCTCCCA 58.503 41.667 0.00 0.00 0.00 4.37
671 776 4.882427 GGTTTATTTCTCTAAGCACCTCCC 59.118 45.833 0.00 0.00 0.00 4.30
672 777 5.497474 TGGTTTATTTCTCTAAGCACCTCC 58.503 41.667 0.00 0.00 0.00 4.30
673 778 6.403746 GCTTGGTTTATTTCTCTAAGCACCTC 60.404 42.308 0.00 0.00 38.97 3.85
674 779 5.416013 GCTTGGTTTATTTCTCTAAGCACCT 59.584 40.000 0.00 0.00 38.97 4.00
675 780 5.416013 AGCTTGGTTTATTTCTCTAAGCACC 59.584 40.000 13.06 0.00 40.93 5.01
676 781 6.502136 AGCTTGGTTTATTTCTCTAAGCAC 57.498 37.500 13.06 0.00 40.93 4.40
677 782 7.524717 AAAGCTTGGTTTATTTCTCTAAGCA 57.475 32.000 0.00 0.00 40.93 3.91
678 783 8.300286 AGAAAAGCTTGGTTTATTTCTCTAAGC 58.700 33.333 0.00 0.00 35.96 3.09
683 788 8.916654 GCTTAAGAAAAGCTTGGTTTATTTCTC 58.083 33.333 6.67 0.00 38.89 2.87
684 789 8.421002 TGCTTAAGAAAAGCTTGGTTTATTTCT 58.579 29.630 6.67 0.00 43.38 2.52
685 790 8.487970 GTGCTTAAGAAAAGCTTGGTTTATTTC 58.512 33.333 6.67 0.00 43.38 2.17
686 791 7.441157 GGTGCTTAAGAAAAGCTTGGTTTATTT 59.559 33.333 6.67 0.00 43.38 1.40
687 792 6.929049 GGTGCTTAAGAAAAGCTTGGTTTATT 59.071 34.615 6.67 0.00 43.38 1.40
688 793 6.455647 GGTGCTTAAGAAAAGCTTGGTTTAT 58.544 36.000 6.67 0.00 43.38 1.40
689 794 5.506649 CGGTGCTTAAGAAAAGCTTGGTTTA 60.507 40.000 6.67 0.00 43.38 2.01
690 795 4.693283 GGTGCTTAAGAAAAGCTTGGTTT 58.307 39.130 6.67 0.00 43.38 3.27
691 796 3.243401 CGGTGCTTAAGAAAAGCTTGGTT 60.243 43.478 6.67 0.00 43.38 3.67
692 797 2.293399 CGGTGCTTAAGAAAAGCTTGGT 59.707 45.455 6.67 0.00 43.38 3.67
693 798 2.351738 CCGGTGCTTAAGAAAAGCTTGG 60.352 50.000 6.67 6.28 43.38 3.61
694 799 2.293399 ACCGGTGCTTAAGAAAAGCTTG 59.707 45.455 6.12 1.57 43.38 4.01
695 800 2.293399 CACCGGTGCTTAAGAAAAGCTT 59.707 45.455 24.02 0.00 43.38 3.74
696 801 1.880027 CACCGGTGCTTAAGAAAAGCT 59.120 47.619 24.02 0.00 43.38 3.74
697 802 2.331809 CACCGGTGCTTAAGAAAAGC 57.668 50.000 24.02 2.81 43.29 3.51
709 814 3.813166 CCCTATACAAATAAGCACCGGTG 59.187 47.826 30.66 30.66 0.00 4.94
710 815 3.457012 ACCCTATACAAATAAGCACCGGT 59.543 43.478 0.00 0.00 0.00 5.28
711 816 4.081322 ACCCTATACAAATAAGCACCGG 57.919 45.455 0.00 0.00 0.00 5.28
712 817 5.924825 GTCTACCCTATACAAATAAGCACCG 59.075 44.000 0.00 0.00 0.00 4.94
713 818 5.924825 CGTCTACCCTATACAAATAAGCACC 59.075 44.000 0.00 0.00 0.00 5.01
714 819 5.404667 GCGTCTACCCTATACAAATAAGCAC 59.595 44.000 0.00 0.00 0.00 4.40
715 820 5.303589 AGCGTCTACCCTATACAAATAAGCA 59.696 40.000 0.00 0.00 0.00 3.91
716 821 5.780984 AGCGTCTACCCTATACAAATAAGC 58.219 41.667 0.00 0.00 0.00 3.09
717 822 8.235905 GTCTAGCGTCTACCCTATACAAATAAG 58.764 40.741 0.00 0.00 0.00 1.73
718 823 7.095060 CGTCTAGCGTCTACCCTATACAAATAA 60.095 40.741 0.00 0.00 35.54 1.40
719 824 6.369890 CGTCTAGCGTCTACCCTATACAAATA 59.630 42.308 0.00 0.00 35.54 1.40
720 825 5.180868 CGTCTAGCGTCTACCCTATACAAAT 59.819 44.000 0.00 0.00 35.54 2.32
721 826 4.512944 CGTCTAGCGTCTACCCTATACAAA 59.487 45.833 0.00 0.00 35.54 2.83
722 827 4.060900 CGTCTAGCGTCTACCCTATACAA 58.939 47.826 0.00 0.00 35.54 2.41
723 828 3.657634 CGTCTAGCGTCTACCCTATACA 58.342 50.000 0.00 0.00 35.54 2.29
724 829 2.414825 GCGTCTAGCGTCTACCCTATAC 59.585 54.545 8.08 0.00 43.66 1.47
725 830 2.693069 GCGTCTAGCGTCTACCCTATA 58.307 52.381 8.08 0.00 43.66 1.31
726 831 1.521580 GCGTCTAGCGTCTACCCTAT 58.478 55.000 8.08 0.00 43.66 2.57
727 832 2.997899 GCGTCTAGCGTCTACCCTA 58.002 57.895 8.08 0.00 43.66 3.53
728 833 3.824810 GCGTCTAGCGTCTACCCT 58.175 61.111 8.08 0.00 43.66 4.34
744 849 9.223557 TTCTACAGGAGAGACGCTTAGTTAAGC 62.224 44.444 12.72 12.72 44.08 3.09
745 850 4.705337 ACAGGAGAGACGCTTAGTTAAG 57.295 45.455 0.00 0.00 36.40 1.85
746 851 5.494724 TCTACAGGAGAGACGCTTAGTTAA 58.505 41.667 0.00 0.00 0.00 2.01
747 852 5.095145 TCTACAGGAGAGACGCTTAGTTA 57.905 43.478 0.00 0.00 0.00 2.24
748 853 3.952931 TCTACAGGAGAGACGCTTAGTT 58.047 45.455 0.00 0.00 0.00 2.24
749 854 3.630892 TCTACAGGAGAGACGCTTAGT 57.369 47.619 0.00 0.00 0.00 2.24
750 855 4.966965 TTTCTACAGGAGAGACGCTTAG 57.033 45.455 0.00 0.00 34.93 2.18
751 856 5.531659 CCTATTTCTACAGGAGAGACGCTTA 59.468 44.000 0.00 0.00 34.93 3.09
752 857 4.339814 CCTATTTCTACAGGAGAGACGCTT 59.660 45.833 0.00 0.00 34.93 4.68
753 858 3.886505 CCTATTTCTACAGGAGAGACGCT 59.113 47.826 0.00 0.00 34.93 5.07
754 859 3.551250 GCCTATTTCTACAGGAGAGACGC 60.551 52.174 0.00 0.00 34.93 5.19
755 860 3.632604 TGCCTATTTCTACAGGAGAGACG 59.367 47.826 0.00 0.00 34.93 4.18
756 861 4.202172 GGTGCCTATTTCTACAGGAGAGAC 60.202 50.000 0.00 0.00 34.93 3.36
757 862 3.961408 GGTGCCTATTTCTACAGGAGAGA 59.039 47.826 0.00 0.00 34.93 3.10
758 863 3.243569 CGGTGCCTATTTCTACAGGAGAG 60.244 52.174 0.00 0.00 34.93 3.20
759 864 2.693591 CGGTGCCTATTTCTACAGGAGA 59.306 50.000 0.00 0.00 33.42 3.71
760 865 2.224066 CCGGTGCCTATTTCTACAGGAG 60.224 54.545 0.00 0.00 33.42 3.69
761 866 1.760613 CCGGTGCCTATTTCTACAGGA 59.239 52.381 0.00 0.00 33.42 3.86
762 867 1.485066 ACCGGTGCCTATTTCTACAGG 59.515 52.381 6.12 0.00 35.04 4.00
763 868 2.550978 CACCGGTGCCTATTTCTACAG 58.449 52.381 24.02 0.00 0.00 2.74
764 869 2.684001 CACCGGTGCCTATTTCTACA 57.316 50.000 24.02 0.00 0.00 2.74
776 881 2.218603 AGTTTTTCTGTAGCACCGGTG 58.781 47.619 30.66 30.66 0.00 4.94
777 882 2.490991 GAGTTTTTCTGTAGCACCGGT 58.509 47.619 0.00 0.00 0.00 5.28
778 883 1.459592 CGAGTTTTTCTGTAGCACCGG 59.540 52.381 0.00 0.00 0.00 5.28
779 884 1.459592 CCGAGTTTTTCTGTAGCACCG 59.540 52.381 0.00 0.00 0.00 4.94
780 885 2.490991 ACCGAGTTTTTCTGTAGCACC 58.509 47.619 0.00 0.00 0.00 5.01
781 886 4.547406 AAACCGAGTTTTTCTGTAGCAC 57.453 40.909 0.00 0.00 31.10 4.40
782 887 6.708949 AGAATAAACCGAGTTTTTCTGTAGCA 59.291 34.615 16.34 0.00 37.01 3.49
783 888 7.130303 AGAATAAACCGAGTTTTTCTGTAGC 57.870 36.000 16.34 0.00 37.01 3.58
784 889 8.989980 AGAAGAATAAACCGAGTTTTTCTGTAG 58.010 33.333 17.02 0.00 37.01 2.74
785 890 8.897872 AGAAGAATAAACCGAGTTTTTCTGTA 57.102 30.769 17.02 1.69 37.01 2.74
786 891 7.803279 AGAAGAATAAACCGAGTTTTTCTGT 57.197 32.000 17.02 12.01 37.01 3.41
787 892 9.813080 CTTAGAAGAATAAACCGAGTTTTTCTG 57.187 33.333 16.24 5.45 37.01 3.02
788 893 8.504815 GCTTAGAAGAATAAACCGAGTTTTTCT 58.495 33.333 7.22 11.11 37.01 2.52
789 894 8.287503 TGCTTAGAAGAATAAACCGAGTTTTTC 58.712 33.333 7.22 9.95 37.01 2.29
790 895 8.074370 GTGCTTAGAAGAATAAACCGAGTTTTT 58.926 33.333 7.22 0.00 37.01 1.94
791 896 7.308408 GGTGCTTAGAAGAATAAACCGAGTTTT 60.308 37.037 7.22 0.00 37.01 2.43
792 897 6.148976 GGTGCTTAGAAGAATAAACCGAGTTT 59.851 38.462 7.11 7.11 39.24 2.66
793 898 5.642491 GGTGCTTAGAAGAATAAACCGAGTT 59.358 40.000 0.00 0.00 0.00 3.01
794 899 5.046520 AGGTGCTTAGAAGAATAAACCGAGT 60.047 40.000 0.00 0.00 0.00 4.18
795 900 5.420409 AGGTGCTTAGAAGAATAAACCGAG 58.580 41.667 0.00 0.00 0.00 4.63
796 901 5.416271 AGGTGCTTAGAAGAATAAACCGA 57.584 39.130 0.00 0.00 0.00 4.69
797 902 4.571176 GGAGGTGCTTAGAAGAATAAACCG 59.429 45.833 0.00 0.00 0.00 4.44
798 903 5.746284 AGGAGGTGCTTAGAAGAATAAACC 58.254 41.667 0.00 0.00 0.00 3.27
799 904 8.788325 TTAAGGAGGTGCTTAGAAGAATAAAC 57.212 34.615 0.00 0.00 0.00 2.01
800 905 7.553044 GCTTAAGGAGGTGCTTAGAAGAATAAA 59.447 37.037 4.29 0.00 0.00 1.40
801 906 7.048512 GCTTAAGGAGGTGCTTAGAAGAATAA 58.951 38.462 4.29 0.00 0.00 1.40
802 907 6.156256 TGCTTAAGGAGGTGCTTAGAAGAATA 59.844 38.462 4.29 0.00 0.00 1.75
803 908 5.045578 TGCTTAAGGAGGTGCTTAGAAGAAT 60.046 40.000 4.29 0.00 0.00 2.40
804 909 4.286032 TGCTTAAGGAGGTGCTTAGAAGAA 59.714 41.667 4.29 0.00 0.00 2.52
805 910 3.838317 TGCTTAAGGAGGTGCTTAGAAGA 59.162 43.478 4.29 0.00 0.00 2.87
806 911 3.935828 GTGCTTAAGGAGGTGCTTAGAAG 59.064 47.826 4.29 0.00 0.00 2.85
807 912 3.307480 GGTGCTTAAGGAGGTGCTTAGAA 60.307 47.826 4.29 0.00 0.00 2.10
808 913 2.236395 GGTGCTTAAGGAGGTGCTTAGA 59.764 50.000 4.29 0.00 0.00 2.10
809 914 2.237392 AGGTGCTTAAGGAGGTGCTTAG 59.763 50.000 4.29 0.00 0.00 2.18
810 915 2.236395 GAGGTGCTTAAGGAGGTGCTTA 59.764 50.000 4.29 0.00 0.00 3.09
811 916 1.003696 GAGGTGCTTAAGGAGGTGCTT 59.996 52.381 4.29 0.00 0.00 3.91
812 917 0.615850 GAGGTGCTTAAGGAGGTGCT 59.384 55.000 4.29 0.00 0.00 4.40
813 918 0.393132 GGAGGTGCTTAAGGAGGTGC 60.393 60.000 4.29 0.00 0.00 5.01
814 919 0.253327 GGGAGGTGCTTAAGGAGGTG 59.747 60.000 4.29 0.00 0.00 4.00
815 920 0.178873 TGGGAGGTGCTTAAGGAGGT 60.179 55.000 4.29 0.00 0.00 3.85
816 921 1.216990 ATGGGAGGTGCTTAAGGAGG 58.783 55.000 4.29 0.00 0.00 4.30
817 922 2.025887 ACAATGGGAGGTGCTTAAGGAG 60.026 50.000 4.29 0.00 0.00 3.69
818 923 1.992557 ACAATGGGAGGTGCTTAAGGA 59.007 47.619 4.29 0.00 0.00 3.36
819 924 2.514458 ACAATGGGAGGTGCTTAAGG 57.486 50.000 4.29 0.00 0.00 2.69
820 925 3.950397 TGTACAATGGGAGGTGCTTAAG 58.050 45.455 0.00 0.00 0.00 1.85
821 926 4.331968 CTTGTACAATGGGAGGTGCTTAA 58.668 43.478 9.13 0.00 0.00 1.85
822 927 3.308117 CCTTGTACAATGGGAGGTGCTTA 60.308 47.826 9.13 0.00 0.00 3.09
823 928 2.555227 CCTTGTACAATGGGAGGTGCTT 60.555 50.000 9.13 0.00 0.00 3.91
824 929 1.004745 CCTTGTACAATGGGAGGTGCT 59.995 52.381 9.13 0.00 0.00 4.40
825 930 1.463674 CCTTGTACAATGGGAGGTGC 58.536 55.000 9.13 0.00 0.00 5.01
826 931 1.463674 GCCTTGTACAATGGGAGGTG 58.536 55.000 16.08 0.00 0.00 4.00
827 932 0.331616 GGCCTTGTACAATGGGAGGT 59.668 55.000 16.08 0.00 0.00 3.85
828 933 0.625849 AGGCCTTGTACAATGGGAGG 59.374 55.000 16.08 11.34 0.00 4.30
829 934 1.281867 TGAGGCCTTGTACAATGGGAG 59.718 52.381 16.08 1.65 0.00 4.30
830 935 1.004277 GTGAGGCCTTGTACAATGGGA 59.996 52.381 16.08 0.00 0.00 4.37
831 936 1.271871 TGTGAGGCCTTGTACAATGGG 60.272 52.381 6.77 14.91 0.00 4.00
832 937 2.086869 CTGTGAGGCCTTGTACAATGG 58.913 52.381 6.77 13.26 0.00 3.16
833 938 3.057969 TCTGTGAGGCCTTGTACAATG 57.942 47.619 6.77 7.68 0.00 2.82
834 939 3.614092 CATCTGTGAGGCCTTGTACAAT 58.386 45.455 6.77 7.06 0.00 2.71
835 940 2.290260 CCATCTGTGAGGCCTTGTACAA 60.290 50.000 6.77 8.28 0.00 2.41
836 941 1.278985 CCATCTGTGAGGCCTTGTACA 59.721 52.381 6.77 12.36 0.00 2.90
837 942 1.555075 TCCATCTGTGAGGCCTTGTAC 59.445 52.381 6.77 7.81 0.00 2.90
838 943 1.951209 TCCATCTGTGAGGCCTTGTA 58.049 50.000 6.77 0.00 0.00 2.41
839 944 1.067295 TTCCATCTGTGAGGCCTTGT 58.933 50.000 6.77 0.00 0.00 3.16
840 945 1.004044 AGTTCCATCTGTGAGGCCTTG 59.996 52.381 6.77 0.00 0.00 3.61
841 946 1.280421 GAGTTCCATCTGTGAGGCCTT 59.720 52.381 6.77 0.00 0.00 4.35
842 947 0.908198 GAGTTCCATCTGTGAGGCCT 59.092 55.000 3.86 3.86 0.00 5.19
843 948 0.460987 CGAGTTCCATCTGTGAGGCC 60.461 60.000 0.00 0.00 0.00 5.19
844 949 0.532573 TCGAGTTCCATCTGTGAGGC 59.467 55.000 0.00 0.00 0.00 4.70
845 950 4.321601 GGATATCGAGTTCCATCTGTGAGG 60.322 50.000 10.70 0.00 31.99 3.86
846 951 4.321601 GGGATATCGAGTTCCATCTGTGAG 60.322 50.000 15.96 0.00 33.43 3.51
847 952 3.574396 GGGATATCGAGTTCCATCTGTGA 59.426 47.826 15.96 0.00 33.43 3.58
848 953 3.306364 GGGGATATCGAGTTCCATCTGTG 60.306 52.174 15.96 0.00 33.43 3.66
849 954 2.900546 GGGGATATCGAGTTCCATCTGT 59.099 50.000 15.96 0.00 33.43 3.41
850 955 3.169099 AGGGGATATCGAGTTCCATCTG 58.831 50.000 15.96 0.00 33.43 2.90
851 956 3.181417 TGAGGGGATATCGAGTTCCATCT 60.181 47.826 15.96 12.55 33.43 2.90
852 957 3.165875 TGAGGGGATATCGAGTTCCATC 58.834 50.000 15.96 11.06 33.43 3.51
853 958 3.260269 TGAGGGGATATCGAGTTCCAT 57.740 47.619 15.96 2.12 33.43 3.41
893 998 5.882557 GGAATTGTGAATCCTATGTGTGACT 59.117 40.000 0.00 0.00 32.75 3.41
894 999 5.066505 GGGAATTGTGAATCCTATGTGTGAC 59.933 44.000 0.00 0.00 35.95 3.67
915 1020 1.823169 CGAGGGACAAAGGAACGGGA 61.823 60.000 0.00 0.00 0.00 5.14
922 1027 5.193679 AGGATAAATTTCGAGGGACAAAGG 58.806 41.667 0.00 0.00 0.00 3.11
929 1034 6.555315 CAAAACTGAGGATAAATTTCGAGGG 58.445 40.000 0.00 0.00 0.00 4.30
930 1035 6.030228 GCAAAACTGAGGATAAATTTCGAGG 58.970 40.000 0.00 0.00 0.00 4.63
931 1036 5.734498 CGCAAAACTGAGGATAAATTTCGAG 59.266 40.000 0.00 0.00 0.00 4.04
953 1058 1.534163 GTGAAGTTACTGGGGAAACGC 59.466 52.381 0.00 0.00 44.99 4.84
955 1060 4.499188 GCTTTGTGAAGTTACTGGGGAAAC 60.499 45.833 0.00 0.00 35.25 2.78
1114 1223 1.421410 GACATCACATCCACGTCGGC 61.421 60.000 0.00 0.00 33.14 5.54
1344 1453 2.027751 GGCTCGATGTCGTAGCCC 59.972 66.667 23.34 12.79 46.71 5.19
1604 1713 2.284921 CCAGGAGGTCCCTCAGCA 60.285 66.667 15.01 0.00 45.60 4.41
1725 1834 2.363018 CTCCTCCTCTCCACGCCA 60.363 66.667 0.00 0.00 0.00 5.69
1929 2046 1.501741 CAAAGGAATGTCGGTGCGG 59.498 57.895 0.00 0.00 0.00 5.69
1945 2062 8.463930 AAAAGTGACTTGATAATGTCTTCCAA 57.536 30.769 0.00 0.00 34.57 3.53
2027 2148 7.650104 GGCACACTGAAAAGATATAGACTAGAC 59.350 40.741 0.00 0.00 0.00 2.59
2048 2172 3.272364 GGGGACTGCATCAGGCACA 62.272 63.158 4.14 0.00 46.45 4.57
2111 2238 6.203530 CACTTTCAGGTATACATGTGGCTATG 59.796 42.308 16.49 2.30 0.00 2.23
2117 2244 6.457392 GCATCACACTTTCAGGTATACATGTG 60.457 42.308 16.49 10.21 38.01 3.21
2123 2250 5.422012 TCTCAGCATCACACTTTCAGGTATA 59.578 40.000 0.00 0.00 0.00 1.47
2223 2351 3.128068 ACTTCACGAAAAATATTCCCGGC 59.872 43.478 0.00 0.00 0.00 6.13
2232 2360 8.989653 TTTGTAGGAAAAACTTCACGAAAAAT 57.010 26.923 0.00 0.00 0.00 1.82
2238 2366 8.015658 CCTTCTATTTGTAGGAAAAACTTCACG 58.984 37.037 0.00 0.00 35.50 4.35
2249 2377 7.786046 TGAACAGTACCTTCTATTTGTAGGA 57.214 36.000 0.00 0.00 36.79 2.94
2260 2388 7.617041 AGCTAATGAATTGAACAGTACCTTC 57.383 36.000 0.00 0.00 0.00 3.46
2290 2608 4.774124 CCTCTGCATCATTTCTCTGGTAA 58.226 43.478 0.00 0.00 0.00 2.85
2291 2609 3.432749 GCCTCTGCATCATTTCTCTGGTA 60.433 47.826 0.00 0.00 37.47 3.25
2319 2637 1.059913 AACTGAAGTCACCCAGGAGG 58.940 55.000 0.00 0.00 43.78 4.30
2320 2638 2.938956 AAACTGAAGTCACCCAGGAG 57.061 50.000 0.00 0.00 34.85 3.69
2321 2639 3.714798 ACTAAAACTGAAGTCACCCAGGA 59.285 43.478 0.00 0.00 34.85 3.86
2322 2640 4.086706 ACTAAAACTGAAGTCACCCAGG 57.913 45.455 0.00 0.00 34.85 4.45
2323 2641 6.451064 AAAACTAAAACTGAAGTCACCCAG 57.549 37.500 0.00 0.00 36.53 4.45
2325 2643 7.096884 AGAAAAACTAAAACTGAAGTCACCC 57.903 36.000 0.00 0.00 0.00 4.61
2326 2644 8.027189 ACAAGAAAAACTAAAACTGAAGTCACC 58.973 33.333 0.00 0.00 0.00 4.02
2328 2646 9.974980 AAACAAGAAAAACTAAAACTGAAGTCA 57.025 25.926 0.00 0.00 0.00 3.41
2330 2648 9.203421 CCAAACAAGAAAAACTAAAACTGAAGT 57.797 29.630 0.00 0.00 0.00 3.01
2331 2649 9.418045 TCCAAACAAGAAAAACTAAAACTGAAG 57.582 29.630 0.00 0.00 0.00 3.02
2332 2650 9.936759 ATCCAAACAAGAAAAACTAAAACTGAA 57.063 25.926 0.00 0.00 0.00 3.02
2333 2651 9.936759 AATCCAAACAAGAAAAACTAAAACTGA 57.063 25.926 0.00 0.00 0.00 3.41
2352 2670 7.615365 AGTCTCAGCCAATGTTATAAATCCAAA 59.385 33.333 0.00 0.00 0.00 3.28
2464 2789 4.537015 GCGTTGCAAGAAAGAACTATGTT 58.463 39.130 0.00 0.00 0.00 2.71
2570 2895 5.185454 TGACACTTCTATGGGCAATAACTG 58.815 41.667 0.00 0.00 0.00 3.16
2634 2989 7.330700 CCACGGAAAATTAGTGCAAACAATTAT 59.669 33.333 0.00 0.00 34.79 1.28
2638 2993 4.363999 CCACGGAAAATTAGTGCAAACAA 58.636 39.130 0.00 0.00 34.79 2.83
2639 2994 3.797184 GCCACGGAAAATTAGTGCAAACA 60.797 43.478 0.00 0.00 34.79 2.83
2640 2995 2.729360 GCCACGGAAAATTAGTGCAAAC 59.271 45.455 0.00 0.00 34.79 2.93
2649 3004 1.995376 AGAAGGTGCCACGGAAAATT 58.005 45.000 0.00 0.00 0.00 1.82
2678 3034 2.102252 CTGTCTAGTGATGGAGAAGGGC 59.898 54.545 0.00 0.00 0.00 5.19
2708 3065 5.141182 ACTCTACAGACAAAGACCTGAAGA 58.859 41.667 0.00 0.00 34.65 2.87
2721 3078 5.302059 TGGGCATCATAGTAACTCTACAGAC 59.698 44.000 0.00 0.00 0.00 3.51
2733 3090 5.221303 GCATTGTACAATTGGGCATCATAGT 60.221 40.000 18.50 0.00 0.00 2.12
2736 3093 3.451540 TGCATTGTACAATTGGGCATCAT 59.548 39.130 21.66 0.00 0.00 2.45
2739 3096 2.566279 TGTGCATTGTACAATTGGGCAT 59.434 40.909 25.78 3.08 32.41 4.40
2740 3097 1.966354 TGTGCATTGTACAATTGGGCA 59.034 42.857 21.66 21.66 0.00 5.36
2741 3098 2.739885 TGTGCATTGTACAATTGGGC 57.260 45.000 18.50 18.17 0.00 5.36
2742 3099 5.929278 CAATTTGTGCATTGTACAATTGGG 58.071 37.500 18.50 8.99 37.81 4.12
2776 3133 5.726308 TCAACTGAAATATGAGGAGGAAGGA 59.274 40.000 0.00 0.00 0.00 3.36
2777 3134 5.994250 TCAACTGAAATATGAGGAGGAAGG 58.006 41.667 0.00 0.00 0.00 3.46
2778 3135 6.017275 GCATCAACTGAAATATGAGGAGGAAG 60.017 42.308 0.00 0.00 0.00 3.46
2779 3136 5.824624 GCATCAACTGAAATATGAGGAGGAA 59.175 40.000 0.00 0.00 0.00 3.36
2782 3139 5.238868 CCAGCATCAACTGAAATATGAGGAG 59.761 44.000 0.00 0.00 40.25 3.69
2787 3144 6.688637 TTCTCCAGCATCAACTGAAATATG 57.311 37.500 0.00 0.00 40.25 1.78
2789 3146 6.417258 TCATTCTCCAGCATCAACTGAAATA 58.583 36.000 0.00 0.00 40.25 1.40
2828 3185 2.577563 TCCATCCTTTGATTCTCAGGCA 59.422 45.455 0.00 0.00 0.00 4.75
2865 3222 0.108138 CCTCACCGTGATCCCTTGTC 60.108 60.000 0.62 0.00 0.00 3.18
2928 3285 0.605319 TTGACGGCAGGTTGACATCC 60.605 55.000 0.00 0.00 0.00 3.51
2934 3291 0.442310 CGTATGTTGACGGCAGGTTG 59.558 55.000 0.00 0.00 39.19 3.77
3024 3381 2.884639 CCACTCATTCCAAACCGTTCTT 59.115 45.455 0.00 0.00 0.00 2.52
3048 3405 4.344968 TCATCCTTCTCAAATATCCTCGCA 59.655 41.667 0.00 0.00 0.00 5.10
3102 3463 2.552599 TTCCGTCTACCAACATGCAA 57.447 45.000 0.00 0.00 0.00 4.08
3132 3493 8.665685 CGTATGCCTGAATTTTTCTAGTACTTT 58.334 33.333 0.00 0.00 0.00 2.66
3170 3531 0.670239 TACGTGACAGCATGCACTGG 60.670 55.000 21.98 8.76 42.53 4.00
3189 3550 3.573967 AGGTTTCCAAAACATGCTCGAAT 59.426 39.130 5.07 0.00 0.00 3.34
3220 4845 6.077197 TCAACGATTGCTATTTCTTTCAACG 58.923 36.000 0.00 0.00 0.00 4.10
3351 4976 1.214589 GCTTCTGCCGGTTACTCGA 59.785 57.895 1.90 0.00 0.00 4.04
3366 4991 4.335647 CCCAGCGACCCAGTGCTT 62.336 66.667 0.00 0.00 40.03 3.91
3394 5089 7.178451 ACAAAGAAACAGAAAAGGGAAAAGAGA 59.822 33.333 0.00 0.00 0.00 3.10
3396 5091 7.239763 ACAAAGAAACAGAAAAGGGAAAAGA 57.760 32.000 0.00 0.00 0.00 2.52
3397 5092 8.996024 TTACAAAGAAACAGAAAAGGGAAAAG 57.004 30.769 0.00 0.00 0.00 2.27
3445 6454 6.564328 ACAAGTTCACTGTTGGAAGAAAATC 58.436 36.000 0.00 0.00 0.00 2.17
3520 6529 5.362430 AGTGGCCTAACAAGATTGTCAAAAA 59.638 36.000 3.32 0.00 41.31 1.94
3538 6548 2.649129 GCCCATTTGGACAGTGGCC 61.649 63.158 8.59 8.59 37.39 5.36
3588 6693 8.890718 TCCCGGGTTAAAAATAAAAACAAAAAG 58.109 29.630 22.86 0.00 0.00 2.27
3632 6738 4.096682 TCGAAAGTGGTTTAAGTTTGGGTG 59.903 41.667 0.00 0.00 0.00 4.61
3633 6739 4.271661 TCGAAAGTGGTTTAAGTTTGGGT 58.728 39.130 0.00 0.00 0.00 4.51
3654 6760 4.021102 TCCCTTGAGTGATCAAAGGTTC 57.979 45.455 18.96 5.16 33.93 3.62
3702 6808 2.353011 CCAAAGTTGCATAAGGGCAGTG 60.353 50.000 0.00 0.00 45.88 3.66
3789 6895 6.897706 TTGAAGATCAACATGACCAATTCA 57.102 33.333 0.00 0.00 32.77 2.57
3821 6929 3.428534 CGCATCCATGATTTCATTGCATG 59.571 43.478 13.30 0.00 37.42 4.06
3843 6951 4.568359 ACACGACACATTCATAGAAGCATC 59.432 41.667 0.00 0.00 0.00 3.91
3854 6962 9.472995 CAACTACAAATATTACACGACACATTC 57.527 33.333 0.00 0.00 0.00 2.67
3889 6997 7.879070 GTGCATTTTGATATGGACATAGACAT 58.121 34.615 0.00 0.00 43.74 3.06
3991 7107 7.334171 GCCTTTTTATTTAGGATGTGCATTGTT 59.666 33.333 0.00 0.00 33.13 2.83
3992 7108 6.818142 GCCTTTTTATTTAGGATGTGCATTGT 59.182 34.615 0.00 0.00 33.13 2.71
3993 7109 6.258507 GGCCTTTTTATTTAGGATGTGCATTG 59.741 38.462 0.00 0.00 33.13 2.82
4041 7157 4.202419 ACAGAAACATAACACAGGCCAGTA 60.202 41.667 5.01 0.00 0.00 2.74
4042 7158 3.149196 CAGAAACATAACACAGGCCAGT 58.851 45.455 5.01 0.00 0.00 4.00
4106 7222 2.963599 TTTTTATATCCCGCTCCCCC 57.036 50.000 0.00 0.00 0.00 5.40
4107 7223 4.814771 CGATATTTTTATATCCCGCTCCCC 59.185 45.833 0.00 0.00 31.51 4.81
4108 7224 5.293569 CACGATATTTTTATATCCCGCTCCC 59.706 44.000 0.00 0.00 31.51 4.30
4109 7225 5.873164 ACACGATATTTTTATATCCCGCTCC 59.127 40.000 0.00 0.00 31.51 4.70
4110 7226 6.963049 ACACGATATTTTTATATCCCGCTC 57.037 37.500 0.00 0.00 31.51 5.03
4113 7229 8.007716 GTCACAACACGATATTTTTATATCCCG 58.992 37.037 0.00 0.00 31.51 5.14
4126 7242 4.450757 CCTCAATGTTGTCACAACACGATA 59.549 41.667 25.59 10.51 36.16 2.92
4138 7255 4.021192 CCCAAATACAAGCCTCAATGTTGT 60.021 41.667 0.00 0.00 38.04 3.32
4141 7258 3.099141 CCCCAAATACAAGCCTCAATGT 58.901 45.455 0.00 0.00 0.00 2.71
4151 7268 1.847737 ACGGCCTATCCCCAAATACAA 59.152 47.619 0.00 0.00 0.00 2.41
4154 7271 1.847737 ACAACGGCCTATCCCCAAATA 59.152 47.619 0.00 0.00 0.00 1.40
4165 7282 0.322816 TAGGACTACGACAACGGCCT 60.323 55.000 0.00 0.00 44.46 5.19
4179 7296 5.163499 CCCATTCTACTGTCAGTCTTAGGAC 60.163 48.000 9.26 0.00 42.41 3.85
4180 7297 4.956700 CCCATTCTACTGTCAGTCTTAGGA 59.043 45.833 9.26 0.00 0.00 2.94
4181 7298 4.100189 CCCCATTCTACTGTCAGTCTTAGG 59.900 50.000 9.26 6.59 0.00 2.69
4182 7299 4.100189 CCCCCATTCTACTGTCAGTCTTAG 59.900 50.000 9.26 1.56 0.00 2.18
4183 7300 4.030913 CCCCCATTCTACTGTCAGTCTTA 58.969 47.826 9.26 0.00 0.00 2.10
4184 7301 2.840651 CCCCCATTCTACTGTCAGTCTT 59.159 50.000 9.26 0.00 0.00 3.01
4185 7302 2.044492 TCCCCCATTCTACTGTCAGTCT 59.956 50.000 9.26 0.00 0.00 3.24
4186 7303 2.467880 TCCCCCATTCTACTGTCAGTC 58.532 52.381 9.26 0.00 0.00 3.51
4187 7304 2.642171 TCCCCCATTCTACTGTCAGT 57.358 50.000 10.99 10.99 0.00 3.41
4188 7305 3.580458 CCTATCCCCCATTCTACTGTCAG 59.420 52.174 0.00 0.00 0.00 3.51
4189 7306 3.051341 ACCTATCCCCCATTCTACTGTCA 60.051 47.826 0.00 0.00 0.00 3.58
4190 7307 3.588569 ACCTATCCCCCATTCTACTGTC 58.411 50.000 0.00 0.00 0.00 3.51
4191 7308 3.726837 ACCTATCCCCCATTCTACTGT 57.273 47.619 0.00 0.00 0.00 3.55
4192 7309 5.342017 TCATACCTATCCCCCATTCTACTG 58.658 45.833 0.00 0.00 0.00 2.74
4193 7310 5.633473 TCATACCTATCCCCCATTCTACT 57.367 43.478 0.00 0.00 0.00 2.57
4194 7311 6.023603 TCTTCATACCTATCCCCCATTCTAC 58.976 44.000 0.00 0.00 0.00 2.59
4195 7312 6.241223 TCTTCATACCTATCCCCCATTCTA 57.759 41.667 0.00 0.00 0.00 2.10
4196 7313 5.097234 CTCTTCATACCTATCCCCCATTCT 58.903 45.833 0.00 0.00 0.00 2.40
4197 7314 4.226168 CCTCTTCATACCTATCCCCCATTC 59.774 50.000 0.00 0.00 0.00 2.67
4198 7315 4.179133 CCTCTTCATACCTATCCCCCATT 58.821 47.826 0.00 0.00 0.00 3.16
4199 7316 3.808189 CCTCTTCATACCTATCCCCCAT 58.192 50.000 0.00 0.00 0.00 4.00
4200 7317 2.763515 GCCTCTTCATACCTATCCCCCA 60.764 54.545 0.00 0.00 0.00 4.96
4201 7318 1.909986 GCCTCTTCATACCTATCCCCC 59.090 57.143 0.00 0.00 0.00 5.40
4202 7319 2.621070 TGCCTCTTCATACCTATCCCC 58.379 52.381 0.00 0.00 0.00 4.81
4203 7320 3.904339 TCTTGCCTCTTCATACCTATCCC 59.096 47.826 0.00 0.00 0.00 3.85
4204 7321 5.247110 TGATCTTGCCTCTTCATACCTATCC 59.753 44.000 0.00 0.00 0.00 2.59
4205 7322 6.352016 TGATCTTGCCTCTTCATACCTATC 57.648 41.667 0.00 0.00 0.00 2.08
4206 7323 5.279910 GCTGATCTTGCCTCTTCATACCTAT 60.280 44.000 0.00 0.00 0.00 2.57
4207 7324 4.039730 GCTGATCTTGCCTCTTCATACCTA 59.960 45.833 0.00 0.00 0.00 3.08
4208 7325 3.181456 GCTGATCTTGCCTCTTCATACCT 60.181 47.826 0.00 0.00 0.00 3.08
4209 7326 3.137533 GCTGATCTTGCCTCTTCATACC 58.862 50.000 0.00 0.00 0.00 2.73
4210 7327 3.137533 GGCTGATCTTGCCTCTTCATAC 58.862 50.000 18.69 0.00 46.38 2.39
4211 7328 3.482156 GGCTGATCTTGCCTCTTCATA 57.518 47.619 18.69 0.00 46.38 2.15
4212 7329 2.345124 GGCTGATCTTGCCTCTTCAT 57.655 50.000 18.69 0.00 46.38 2.57
4213 7330 3.869623 GGCTGATCTTGCCTCTTCA 57.130 52.632 18.69 0.00 46.38 3.02
4220 7337 1.404391 CTTCACCATGGCTGATCTTGC 59.596 52.381 13.04 0.00 0.00 4.01
4221 7338 2.719739 ACTTCACCATGGCTGATCTTG 58.280 47.619 13.04 0.00 0.00 3.02
4222 7339 3.087031 CAACTTCACCATGGCTGATCTT 58.913 45.455 13.04 6.45 0.00 2.40
4223 7340 2.040813 ACAACTTCACCATGGCTGATCT 59.959 45.455 13.04 0.71 0.00 2.75
4224 7341 2.440409 ACAACTTCACCATGGCTGATC 58.560 47.619 13.04 0.00 0.00 2.92
4225 7342 2.592102 ACAACTTCACCATGGCTGAT 57.408 45.000 13.04 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.