Multiple sequence alignment - TraesCS6B01G146300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G146300 chr6B 100.000 4409 0 0 1 4409 146841225 146836817 0.000000e+00 8142.0
1 TraesCS6B01G146300 chr6B 91.729 133 7 2 3619 3750 146708121 146707992 9.740000e-42 182.0
2 TraesCS6B01G146300 chr6B 86.364 132 18 0 3886 4017 146707690 146707559 1.280000e-30 145.0
3 TraesCS6B01G146300 chr6B 94.366 71 3 1 3753 3823 146707882 146707813 1.680000e-19 108.0
4 TraesCS6B01G146300 chr6D 93.215 3670 144 44 123 3743 72232495 72228882 0.000000e+00 5301.0
5 TraesCS6B01G146300 chr6D 93.048 863 37 8 1715 2557 367198851 367199710 0.000000e+00 1240.0
6 TraesCS6B01G146300 chr6D 93.031 861 37 15 1715 2557 40315360 40314505 0.000000e+00 1236.0
7 TraesCS6B01G146300 chr6D 92.799 861 40 8 1715 2557 22687634 22688490 0.000000e+00 1227.0
8 TraesCS6B01G146300 chr6D 88.889 81 6 1 3757 3834 72228822 72228742 3.630000e-16 97.1
9 TraesCS6B01G146300 chr6A 92.999 1614 64 24 123 1716 88858972 88857388 0.000000e+00 2309.0
10 TraesCS6B01G146300 chr6A 93.508 1263 62 12 2561 3810 88856154 88854899 0.000000e+00 1860.0
11 TraesCS6B01G146300 chr6A 82.727 220 24 5 3801 4017 88852646 88852438 2.710000e-42 183.0
12 TraesCS6B01G146300 chr7D 93.380 861 35 11 1715 2557 70621405 70622261 0.000000e+00 1254.0
13 TraesCS6B01G146300 chr7D 93.148 861 37 11 1715 2557 132359068 132359924 0.000000e+00 1243.0
14 TraesCS6B01G146300 chr7D 93.039 862 36 11 1715 2557 524948294 524947438 0.000000e+00 1238.0
15 TraesCS6B01G146300 chr7D 84.141 681 106 2 2713 3392 532900508 532899829 0.000000e+00 658.0
16 TraesCS6B01G146300 chr7D 83.700 681 109 2 2713 3392 533433526 533432847 3.720000e-180 641.0
17 TraesCS6B01G146300 chr7D 95.178 394 19 0 4015 4408 148150122 148150515 1.350000e-174 623.0
18 TraesCS6B01G146300 chr4D 93.264 861 36 11 1715 2557 456611958 456612814 0.000000e+00 1249.0
19 TraesCS6B01G146300 chr4D 94.911 393 20 0 4017 4409 1616627 1616235 2.250000e-172 616.0
20 TraesCS6B01G146300 chr5D 93.264 861 35 11 1715 2557 450645479 450646334 0.000000e+00 1247.0
21 TraesCS6B01G146300 chr5D 92.816 863 38 12 1715 2557 402592070 402591212 0.000000e+00 1229.0
22 TraesCS6B01G146300 chr5D 92.014 864 40 16 1715 2557 500307693 500306838 0.000000e+00 1186.0
23 TraesCS6B01G146300 chr5D 95.431 394 18 0 4016 4409 450523550 450523943 2.890000e-176 628.0
24 TraesCS6B01G146300 chr5D 81.307 551 98 5 2829 3377 398908744 398908197 4.050000e-120 442.0
25 TraesCS6B01G146300 chr3D 92.915 861 38 15 1715 2557 171053408 171052553 0.000000e+00 1230.0
26 TraesCS6B01G146300 chr3D 92.584 863 40 13 1715 2557 432359684 432358826 0.000000e+00 1218.0
27 TraesCS6B01G146300 chr3D 95.190 395 19 0 4015 4409 321938278 321938672 3.740000e-175 625.0
28 TraesCS6B01G146300 chr3D 94.937 395 20 0 4015 4409 483189954 483190348 1.740000e-173 619.0
29 TraesCS6B01G146300 chr5B 92.799 861 42 6 1715 2557 85107461 85108319 0.000000e+00 1229.0
30 TraesCS6B01G146300 chr5B 79.772 702 136 5 2713 3412 479203658 479202961 5.090000e-139 505.0
31 TraesCS6B01G146300 chr7A 84.412 680 106 0 2713 3392 612992225 612991546 0.000000e+00 669.0
32 TraesCS6B01G146300 chr7B 83.847 681 108 2 2713 3392 573262394 573261715 0.000000e+00 647.0
33 TraesCS6B01G146300 chr1D 91.340 485 22 10 1715 2181 482575643 482575161 0.000000e+00 645.0
34 TraesCS6B01G146300 chr1D 94.670 394 21 0 4016 4409 435762367 435761974 2.910000e-171 612.0
35 TraesCS6B01G146300 chr1A 95.190 395 19 0 4015 4409 504105564 504105170 3.740000e-175 625.0
36 TraesCS6B01G146300 chr5A 94.937 395 19 1 4016 4409 562096011 562095617 6.270000e-173 617.0
37 TraesCS6B01G146300 chr5A 80.814 688 123 9 2708 3392 503952320 503953001 8.400000e-147 531.0
38 TraesCS6B01G146300 chr3B 94.911 393 20 0 4017 4409 533024554 533024946 2.250000e-172 616.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G146300 chr6B 146836817 146841225 4408 True 8142.000000 8142 100.000000 1 4409 1 chr6B.!!$R1 4408
1 TraesCS6B01G146300 chr6D 72228742 72232495 3753 True 2699.050000 5301 91.052000 123 3834 2 chr6D.!!$R2 3711
2 TraesCS6B01G146300 chr6D 367198851 367199710 859 False 1240.000000 1240 93.048000 1715 2557 1 chr6D.!!$F2 842
3 TraesCS6B01G146300 chr6D 40314505 40315360 855 True 1236.000000 1236 93.031000 1715 2557 1 chr6D.!!$R1 842
4 TraesCS6B01G146300 chr6D 22687634 22688490 856 False 1227.000000 1227 92.799000 1715 2557 1 chr6D.!!$F1 842
5 TraesCS6B01G146300 chr6A 88852438 88858972 6534 True 1450.666667 2309 89.744667 123 4017 3 chr6A.!!$R1 3894
6 TraesCS6B01G146300 chr7D 70621405 70622261 856 False 1254.000000 1254 93.380000 1715 2557 1 chr7D.!!$F1 842
7 TraesCS6B01G146300 chr7D 132359068 132359924 856 False 1243.000000 1243 93.148000 1715 2557 1 chr7D.!!$F2 842
8 TraesCS6B01G146300 chr7D 524947438 524948294 856 True 1238.000000 1238 93.039000 1715 2557 1 chr7D.!!$R1 842
9 TraesCS6B01G146300 chr7D 532899829 532900508 679 True 658.000000 658 84.141000 2713 3392 1 chr7D.!!$R2 679
10 TraesCS6B01G146300 chr7D 533432847 533433526 679 True 641.000000 641 83.700000 2713 3392 1 chr7D.!!$R3 679
11 TraesCS6B01G146300 chr4D 456611958 456612814 856 False 1249.000000 1249 93.264000 1715 2557 1 chr4D.!!$F1 842
12 TraesCS6B01G146300 chr5D 450645479 450646334 855 False 1247.000000 1247 93.264000 1715 2557 1 chr5D.!!$F2 842
13 TraesCS6B01G146300 chr5D 402591212 402592070 858 True 1229.000000 1229 92.816000 1715 2557 1 chr5D.!!$R2 842
14 TraesCS6B01G146300 chr5D 500306838 500307693 855 True 1186.000000 1186 92.014000 1715 2557 1 chr5D.!!$R3 842
15 TraesCS6B01G146300 chr5D 398908197 398908744 547 True 442.000000 442 81.307000 2829 3377 1 chr5D.!!$R1 548
16 TraesCS6B01G146300 chr3D 171052553 171053408 855 True 1230.000000 1230 92.915000 1715 2557 1 chr3D.!!$R1 842
17 TraesCS6B01G146300 chr3D 432358826 432359684 858 True 1218.000000 1218 92.584000 1715 2557 1 chr3D.!!$R2 842
18 TraesCS6B01G146300 chr5B 85107461 85108319 858 False 1229.000000 1229 92.799000 1715 2557 1 chr5B.!!$F1 842
19 TraesCS6B01G146300 chr5B 479202961 479203658 697 True 505.000000 505 79.772000 2713 3412 1 chr5B.!!$R1 699
20 TraesCS6B01G146300 chr7A 612991546 612992225 679 True 669.000000 669 84.412000 2713 3392 1 chr7A.!!$R1 679
21 TraesCS6B01G146300 chr7B 573261715 573262394 679 True 647.000000 647 83.847000 2713 3392 1 chr7B.!!$R1 679
22 TraesCS6B01G146300 chr5A 503952320 503953001 681 False 531.000000 531 80.814000 2708 3392 1 chr5A.!!$F1 684

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
383 388 0.099436 GAATTGGTCAGCGTCCATGC 59.901 55.0 0.00 0.0 34.75 4.06 F
1113 1141 2.283145 ATGTGCCTATCAAGCCCATC 57.717 50.0 0.00 0.0 0.00 3.51 F
2239 2408 1.059098 AACACAGGCTCATGTCCAGA 58.941 50.0 1.58 0.0 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2165 2329 0.036105 ATGCCTCGCAATGTGACTGA 60.036 50.000 0.00 0.00 43.62 3.41 R
2302 2471 3.412237 TTGGTAAGTCTGGCTGTTACC 57.588 47.619 13.61 13.61 44.12 2.85 R
4053 6895 0.030773 GACCGTATGCATCGCTCAGA 59.969 55.000 0.19 0.00 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.282831 GCCCAAATAATTCGATTCCCG 57.717 47.619 0.00 0.00 40.25 5.14
21 22 2.030274 GCCCAAATAATTCGATTCCCGG 60.030 50.000 0.00 0.00 39.14 5.73
22 23 3.219281 CCCAAATAATTCGATTCCCGGT 58.781 45.455 0.00 0.00 39.14 5.28
23 24 4.391155 CCCAAATAATTCGATTCCCGGTA 58.609 43.478 0.00 0.00 39.14 4.02
24 25 4.214758 CCCAAATAATTCGATTCCCGGTAC 59.785 45.833 0.00 0.00 39.14 3.34
25 26 4.214758 CCAAATAATTCGATTCCCGGTACC 59.785 45.833 0.16 0.16 39.14 3.34
26 27 2.798976 TAATTCGATTCCCGGTACCG 57.201 50.000 27.68 27.68 39.14 4.02
27 28 0.531311 AATTCGATTCCCGGTACCGC 60.531 55.000 29.15 13.59 39.14 5.68
28 29 2.688526 ATTCGATTCCCGGTACCGCG 62.689 60.000 29.15 24.34 39.14 6.46
52 53 4.767255 CCTGTGCTCCGGCTGACC 62.767 72.222 0.00 0.00 39.59 4.02
62 63 2.124570 GGCTGACCGGTGATGCAT 60.125 61.111 14.63 0.00 0.00 3.96
63 64 2.182842 GGCTGACCGGTGATGCATC 61.183 63.158 14.63 20.14 0.00 3.91
64 65 2.528743 GCTGACCGGTGATGCATCG 61.529 63.158 14.63 10.57 37.76 3.84
69 70 4.854924 CGGTGATGCATCGGGCCA 62.855 66.667 24.69 7.95 43.89 5.36
70 71 2.203394 GGTGATGCATCGGGCCAT 60.203 61.111 21.34 0.00 43.89 4.40
71 72 2.558286 GGTGATGCATCGGGCCATG 61.558 63.158 21.34 7.95 43.89 3.66
76 77 3.142838 GCATCGGGCCATGCTGTT 61.143 61.111 24.53 0.00 45.03 3.16
77 78 3.113745 CATCGGGCCATGCTGTTC 58.886 61.111 4.39 0.00 0.00 3.18
78 79 1.750018 CATCGGGCCATGCTGTTCA 60.750 57.895 4.39 0.00 0.00 3.18
79 80 1.750399 ATCGGGCCATGCTGTTCAC 60.750 57.895 4.39 0.00 0.00 3.18
80 81 3.803082 CGGGCCATGCTGTTCACG 61.803 66.667 4.39 0.00 0.00 4.35
81 82 3.443045 GGGCCATGCTGTTCACGG 61.443 66.667 4.39 0.00 0.00 4.94
82 83 3.443045 GGCCATGCTGTTCACGGG 61.443 66.667 0.00 0.00 0.00 5.28
83 84 3.443045 GCCATGCTGTTCACGGGG 61.443 66.667 0.00 0.00 0.00 5.73
84 85 2.751436 CCATGCTGTTCACGGGGG 60.751 66.667 0.00 0.00 0.00 5.40
85 86 2.034066 CATGCTGTTCACGGGGGT 59.966 61.111 0.00 0.00 0.00 4.95
86 87 2.034066 ATGCTGTTCACGGGGGTG 59.966 61.111 0.00 0.00 0.00 4.61
87 88 2.829384 ATGCTGTTCACGGGGGTGT 61.829 57.895 0.00 0.00 0.00 4.16
88 89 2.978010 GCTGTTCACGGGGGTGTG 60.978 66.667 0.00 0.00 41.28 3.82
89 90 2.978010 CTGTTCACGGGGGTGTGC 60.978 66.667 0.00 0.00 39.73 4.57
90 91 4.920112 TGTTCACGGGGGTGTGCG 62.920 66.667 0.00 0.00 39.73 5.34
91 92 4.612412 GTTCACGGGGGTGTGCGA 62.612 66.667 0.00 0.00 39.73 5.10
92 93 3.632080 TTCACGGGGGTGTGCGAT 61.632 61.111 0.00 0.00 39.73 4.58
93 94 3.892740 TTCACGGGGGTGTGCGATG 62.893 63.158 0.00 0.00 39.73 3.84
94 95 4.386951 CACGGGGGTGTGCGATGA 62.387 66.667 0.00 0.00 32.31 2.92
95 96 3.399181 ACGGGGGTGTGCGATGAT 61.399 61.111 0.00 0.00 0.00 2.45
96 97 2.124736 CGGGGGTGTGCGATGATT 60.125 61.111 0.00 0.00 0.00 2.57
97 98 2.472059 CGGGGGTGTGCGATGATTG 61.472 63.158 0.00 0.00 0.00 2.67
98 99 1.378514 GGGGGTGTGCGATGATTGT 60.379 57.895 0.00 0.00 0.00 2.71
99 100 1.376609 GGGGGTGTGCGATGATTGTC 61.377 60.000 0.00 0.00 0.00 3.18
100 101 0.392998 GGGGTGTGCGATGATTGTCT 60.393 55.000 0.00 0.00 0.00 3.41
101 102 0.729116 GGGTGTGCGATGATTGTCTG 59.271 55.000 0.00 0.00 0.00 3.51
102 103 0.729116 GGTGTGCGATGATTGTCTGG 59.271 55.000 0.00 0.00 0.00 3.86
103 104 0.729116 GTGTGCGATGATTGTCTGGG 59.271 55.000 0.00 0.00 0.00 4.45
104 105 0.392863 TGTGCGATGATTGTCTGGGG 60.393 55.000 0.00 0.00 0.00 4.96
105 106 1.097547 GTGCGATGATTGTCTGGGGG 61.098 60.000 0.00 0.00 0.00 5.40
106 107 2.189499 GCGATGATTGTCTGGGGGC 61.189 63.158 0.00 0.00 0.00 5.80
107 108 1.224315 CGATGATTGTCTGGGGGCA 59.776 57.895 0.00 0.00 0.00 5.36
108 109 0.179009 CGATGATTGTCTGGGGGCAT 60.179 55.000 0.00 0.00 0.00 4.40
109 110 1.751733 CGATGATTGTCTGGGGGCATT 60.752 52.381 0.00 0.00 0.00 3.56
110 111 2.391678 GATGATTGTCTGGGGGCATTT 58.608 47.619 0.00 0.00 0.00 2.32
111 112 1.851304 TGATTGTCTGGGGGCATTTC 58.149 50.000 0.00 0.00 0.00 2.17
112 113 1.358787 TGATTGTCTGGGGGCATTTCT 59.641 47.619 0.00 0.00 0.00 2.52
113 114 2.225343 TGATTGTCTGGGGGCATTTCTT 60.225 45.455 0.00 0.00 0.00 2.52
114 115 1.631405 TTGTCTGGGGGCATTTCTTG 58.369 50.000 0.00 0.00 0.00 3.02
159 164 4.301027 GGCGACCGGAGCTATGGG 62.301 72.222 21.72 2.42 34.52 4.00
169 174 1.745653 GGAGCTATGGGTTTCTTGCAC 59.254 52.381 0.00 0.00 0.00 4.57
206 211 2.892640 CTGGGACTGCGGATTCGA 59.107 61.111 0.00 0.00 39.00 3.71
285 290 4.541482 GCATGGTGGTGATGCGCG 62.541 66.667 0.00 0.00 37.10 6.86
353 358 7.834881 ATAAATGGACATTGAAGCTGATCAT 57.165 32.000 0.00 0.00 0.00 2.45
383 388 0.099436 GAATTGGTCAGCGTCCATGC 59.901 55.000 0.00 0.00 34.75 4.06
531 542 5.881923 TGGTACAGTTTAGGTTCAGTTCT 57.118 39.130 0.00 0.00 0.00 3.01
535 546 6.935208 GGTACAGTTTAGGTTCAGTTCTGAAT 59.065 38.462 16.55 6.29 0.00 2.57
536 547 7.444487 GGTACAGTTTAGGTTCAGTTCTGAATT 59.556 37.037 16.55 11.38 0.00 2.17
537 548 7.497925 ACAGTTTAGGTTCAGTTCTGAATTC 57.502 36.000 16.55 12.39 0.00 2.17
571 582 6.182507 TGGAGTTCCACATAAACACTTAGT 57.817 37.500 0.00 0.00 42.01 2.24
572 583 7.305813 TGGAGTTCCACATAAACACTTAGTA 57.694 36.000 0.00 0.00 42.01 1.82
573 584 7.156673 TGGAGTTCCACATAAACACTTAGTAC 58.843 38.462 0.00 0.00 42.01 2.73
574 585 6.592994 GGAGTTCCACATAAACACTTAGTACC 59.407 42.308 0.00 0.00 35.64 3.34
575 586 7.069877 AGTTCCACATAAACACTTAGTACCA 57.930 36.000 0.00 0.00 0.00 3.25
576 587 7.511268 AGTTCCACATAAACACTTAGTACCAA 58.489 34.615 0.00 0.00 0.00 3.67
577 588 7.994334 AGTTCCACATAAACACTTAGTACCAAA 59.006 33.333 0.00 0.00 0.00 3.28
653 664 3.876309 AAGCCTGGTTTAGTTGGAGAA 57.124 42.857 0.00 0.00 0.00 2.87
779 790 4.886247 TGAGTTTAAGACCCAAACAACG 57.114 40.909 0.00 0.00 38.16 4.10
796 807 8.612619 CCAAACAACGTAAATATAGATTCAGCT 58.387 33.333 0.00 0.00 0.00 4.24
927 955 6.922957 TCAAAATTTGGTGATTGTGTAAGCTC 59.077 34.615 5.83 0.00 0.00 4.09
1113 1141 2.283145 ATGTGCCTATCAAGCCCATC 57.717 50.000 0.00 0.00 0.00 3.51
1457 1485 2.554032 CACACCTTTTCCATCGCTCTTT 59.446 45.455 0.00 0.00 0.00 2.52
1562 1595 9.658799 ATCTTATATCTGCATGTGTACATTACC 57.341 33.333 0.00 0.00 33.61 2.85
1563 1596 8.094548 TCTTATATCTGCATGTGTACATTACCC 58.905 37.037 0.00 0.00 33.61 3.69
1564 1597 3.990959 TCTGCATGTGTACATTACCCA 57.009 42.857 0.00 0.00 33.61 4.51
1578 1617 7.934665 TGTACATTACCCATTATATTCGCAAGT 59.065 33.333 0.00 0.00 39.48 3.16
1587 1626 7.116948 CCCATTATATTCGCAAGTTCACTCTAG 59.883 40.741 0.00 0.00 39.48 2.43
1607 1646 8.007742 ACTCTAGTATTCATCAAGGATGGTACT 58.992 37.037 19.26 19.26 40.77 2.73
1688 1727 6.346598 CGATTCGAACTTGAAATACACACACT 60.347 38.462 0.00 0.00 0.00 3.55
1689 1728 5.651172 TCGAACTTGAAATACACACACTG 57.349 39.130 0.00 0.00 0.00 3.66
1806 1949 5.853572 ACCTAGGTAAAATTGGGAACAGA 57.146 39.130 14.41 0.00 44.54 3.41
1861 2004 4.074259 TGATTCTGGTCAGTTTCACATGG 58.926 43.478 0.00 0.00 0.00 3.66
1914 2057 5.582689 GCAATAACTGGCCACTTATCTTT 57.417 39.130 15.48 2.06 0.00 2.52
1920 2063 3.502211 ACTGGCCACTTATCTTTGTTTCG 59.498 43.478 0.00 0.00 0.00 3.46
2024 2170 8.012809 CACTCTGTAGCTATATAGACAACTTCG 58.987 40.741 14.16 0.00 0.00 3.79
2056 2207 5.304101 TGGCATGGAATATATTGTTGGGTTC 59.696 40.000 1.78 0.00 0.00 3.62
2070 2221 5.701224 TGTTGGGTTCTTCACCTTTTCTAT 58.299 37.500 0.00 0.00 46.38 1.98
2072 2223 7.291566 TGTTGGGTTCTTCACCTTTTCTATTA 58.708 34.615 0.00 0.00 46.38 0.98
2086 2240 9.452287 ACCTTTTCTATTACGCTTTGGTATTTA 57.548 29.630 0.00 0.00 0.00 1.40
2165 2329 5.939764 TCTGCATCAACCTGTATTACTCT 57.060 39.130 0.00 0.00 0.00 3.24
2239 2408 1.059098 AACACAGGCTCATGTCCAGA 58.941 50.000 1.58 0.00 0.00 3.86
2268 2437 6.981722 ACCTAAAATTAGCACCTTCTGTTTG 58.018 36.000 0.00 0.00 0.00 2.93
2586 3103 8.147642 AGCATTCATTCTACACAAGTATAAGC 57.852 34.615 0.00 0.00 0.00 3.09
2587 3104 7.770433 AGCATTCATTCTACACAAGTATAAGCA 59.230 33.333 0.00 0.00 0.00 3.91
2588 3105 8.562892 GCATTCATTCTACACAAGTATAAGCAT 58.437 33.333 0.00 0.00 0.00 3.79
2602 3119 9.309516 CAAGTATAAGCATGCTGATGAATTTTT 57.690 29.630 25.58 7.10 0.00 1.94
3213 3741 4.406456 AGATGCTCATCTTCGATCCTACT 58.594 43.478 6.56 0.00 45.31 2.57
3243 3771 0.111639 GTGTTACCCAGGCCCTTGAA 59.888 55.000 0.00 0.00 0.00 2.69
3264 3792 3.521727 ACACCCTTACATGTCTCCTCTT 58.478 45.455 0.00 0.00 0.00 2.85
3309 3837 1.091771 CGCAAGTGCCCATCGATCTT 61.092 55.000 0.00 0.00 37.91 2.40
3450 3978 2.543067 GAAGAACCCGGCAGGCTCAT 62.543 60.000 0.00 0.00 40.58 2.90
3451 3979 2.514824 GAACCCGGCAGGCTCATC 60.515 66.667 0.00 0.00 40.58 2.92
3452 3980 3.011517 AACCCGGCAGGCTCATCT 61.012 61.111 0.00 0.00 40.58 2.90
3503 4031 8.372459 TGATTATCGCACCTATTAAGTAACCAT 58.628 33.333 0.00 0.00 0.00 3.55
3518 4046 2.327343 CCATGACGTGCAGTGTGGG 61.327 63.158 0.00 0.00 33.75 4.61
3522 4050 3.161450 ACGTGCAGTGTGGGGAGT 61.161 61.111 0.00 0.00 0.00 3.85
3627 4157 4.637977 TGTTGTGTTGTTGTATGAGCTCAA 59.362 37.500 22.50 7.51 0.00 3.02
3662 4193 4.213270 TGAAGCGAATTCAGTAAGTGTTGG 59.787 41.667 6.22 0.00 43.09 3.77
3739 4270 2.616376 TGCTGTTATTCGCTTGTGTGTT 59.384 40.909 0.00 0.00 0.00 3.32
3745 4276 7.096230 GCTGTTATTCGCTTGTGTGTTTTATTT 60.096 33.333 0.00 0.00 0.00 1.40
3746 4277 9.388346 CTGTTATTCGCTTGTGTGTTTTATTTA 57.612 29.630 0.00 0.00 0.00 1.40
3747 4278 9.388346 TGTTATTCGCTTGTGTGTTTTATTTAG 57.612 29.630 0.00 0.00 0.00 1.85
3750 4281 8.944212 ATTCGCTTGTGTGTTTTATTTAGTAC 57.056 30.769 0.00 0.00 0.00 2.73
3857 6699 7.322664 TGGGTTTATACTACTTAACTTGGACG 58.677 38.462 0.00 0.00 0.00 4.79
3868 6710 7.417496 ACTTAACTTGGACGTTTAATCACTC 57.583 36.000 0.00 0.00 0.00 3.51
3871 6713 4.710324 ACTTGGACGTTTAATCACTCCAA 58.290 39.130 10.29 10.29 38.43 3.53
3874 6716 4.312443 TGGACGTTTAATCACTCCAAGAC 58.688 43.478 0.00 0.00 0.00 3.01
3880 6722 6.710744 ACGTTTAATCACTCCAAGACAAGAAT 59.289 34.615 0.00 0.00 0.00 2.40
3881 6723 7.228706 ACGTTTAATCACTCCAAGACAAGAATT 59.771 33.333 0.00 0.00 0.00 2.17
3882 6724 8.717821 CGTTTAATCACTCCAAGACAAGAATTA 58.282 33.333 0.00 0.00 0.00 1.40
3888 6730 9.829507 ATCACTCCAAGACAAGAATTAGATAAG 57.170 33.333 0.00 0.00 0.00 1.73
3889 6731 9.035890 TCACTCCAAGACAAGAATTAGATAAGA 57.964 33.333 0.00 0.00 0.00 2.10
3890 6732 9.658799 CACTCCAAGACAAGAATTAGATAAGAA 57.341 33.333 0.00 0.00 0.00 2.52
3904 6746 7.492352 TTAGATAAGAATTAAGGCGCCTTTC 57.508 36.000 43.93 33.78 37.47 2.62
3909 6751 2.489938 ATTAAGGCGCCTTTCTGACA 57.510 45.000 43.93 24.39 37.47 3.58
3935 6777 5.003804 GCAGTCTGAAAGTAAATCCTCCAA 58.996 41.667 3.32 0.00 33.76 3.53
3940 6782 7.229506 AGTCTGAAAGTAAATCCTCCAAAACAG 59.770 37.037 0.00 0.00 33.76 3.16
3941 6783 6.490040 TCTGAAAGTAAATCCTCCAAAACAGG 59.510 38.462 0.00 0.00 33.76 4.00
3942 6784 5.538433 TGAAAGTAAATCCTCCAAAACAGGG 59.462 40.000 0.00 0.00 0.00 4.45
3953 6795 0.765510 AAAACAGGGAGACTCGCCTT 59.234 50.000 15.40 5.24 0.00 4.35
3966 6808 4.518970 AGACTCGCCTTAATTTTGAAAGCA 59.481 37.500 0.00 0.00 0.00 3.91
3969 6811 5.132897 TCGCCTTAATTTTGAAAGCACAT 57.867 34.783 0.00 0.00 0.00 3.21
3974 6816 7.753132 CGCCTTAATTTTGAAAGCACATACTTA 59.247 33.333 0.00 0.00 0.00 2.24
3997 6839 6.764308 ATGATTGTACAAGAATGAACCCAG 57.236 37.500 14.65 0.00 0.00 4.45
4006 6848 4.861102 AGAATGAACCCAGAAGCAAAAG 57.139 40.909 0.00 0.00 0.00 2.27
4010 6852 4.654091 TGAACCCAGAAGCAAAAGAAAG 57.346 40.909 0.00 0.00 0.00 2.62
4014 6856 4.473444 ACCCAGAAGCAAAAGAAAGATGA 58.527 39.130 0.00 0.00 0.00 2.92
4017 6859 6.042437 ACCCAGAAGCAAAAGAAAGATGATTT 59.958 34.615 0.00 0.00 0.00 2.17
4018 6860 6.932960 CCCAGAAGCAAAAGAAAGATGATTTT 59.067 34.615 0.00 0.00 0.00 1.82
4019 6861 7.443272 CCCAGAAGCAAAAGAAAGATGATTTTT 59.557 33.333 0.00 0.00 0.00 1.94
4041 6883 6.911250 TTTTTAGAAAAGGAAGATGACCCC 57.089 37.500 0.00 0.00 0.00 4.95
4042 6884 4.586306 TTAGAAAAGGAAGATGACCCCC 57.414 45.455 0.00 0.00 0.00 5.40
4043 6885 1.282157 AGAAAAGGAAGATGACCCCCG 59.718 52.381 0.00 0.00 0.00 5.73
4044 6886 0.331616 AAAAGGAAGATGACCCCCGG 59.668 55.000 0.00 0.00 0.00 5.73
4045 6887 2.211468 AAAGGAAGATGACCCCCGGC 62.211 60.000 0.00 0.00 0.00 6.13
4046 6888 4.191015 GGAAGATGACCCCCGGCC 62.191 72.222 0.00 0.00 0.00 6.13
4047 6889 3.090532 GAAGATGACCCCCGGCCT 61.091 66.667 0.00 0.00 0.00 5.19
4048 6890 3.090532 AAGATGACCCCCGGCCTC 61.091 66.667 0.00 0.00 0.00 4.70
4049 6891 3.642741 AAGATGACCCCCGGCCTCT 62.643 63.158 0.00 0.00 0.00 3.69
4050 6892 3.866582 GATGACCCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
4056 6898 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
4057 6899 3.473647 CCCGGCCTCTGCATCTGA 61.474 66.667 0.00 0.00 40.13 3.27
4058 6900 2.108566 CCGGCCTCTGCATCTGAG 59.891 66.667 0.00 0.00 40.13 3.35
4059 6901 2.588314 CGGCCTCTGCATCTGAGC 60.588 66.667 0.00 0.00 40.13 4.26
4060 6902 2.588314 GGCCTCTGCATCTGAGCG 60.588 66.667 0.00 0.00 40.13 5.03
4061 6903 2.498248 GCCTCTGCATCTGAGCGA 59.502 61.111 0.00 0.00 37.31 4.93
4062 6904 1.069427 GCCTCTGCATCTGAGCGAT 59.931 57.895 0.00 0.00 37.31 4.58
4070 6912 1.066136 CATCTGAGCGATGCATACGG 58.934 55.000 16.56 7.57 42.75 4.02
4071 6913 0.676184 ATCTGAGCGATGCATACGGT 59.324 50.000 18.50 18.50 43.87 4.83
4074 6916 4.420143 AGCGATGCATACGGTCAC 57.580 55.556 14.55 2.95 36.82 3.67
4075 6917 1.816537 AGCGATGCATACGGTCACT 59.183 52.632 14.55 4.73 36.82 3.41
4076 6918 0.175760 AGCGATGCATACGGTCACTT 59.824 50.000 14.55 0.00 36.82 3.16
4077 6919 1.006832 GCGATGCATACGGTCACTTT 58.993 50.000 16.56 0.00 0.00 2.66
4078 6920 2.159156 AGCGATGCATACGGTCACTTTA 60.159 45.455 14.55 0.00 36.82 1.85
4079 6921 2.800544 GCGATGCATACGGTCACTTTAT 59.199 45.455 16.56 0.00 0.00 1.40
4080 6922 3.247648 GCGATGCATACGGTCACTTTATT 59.752 43.478 16.56 0.00 0.00 1.40
4081 6923 4.446385 GCGATGCATACGGTCACTTTATTA 59.554 41.667 16.56 0.00 0.00 0.98
4082 6924 5.050634 GCGATGCATACGGTCACTTTATTAA 60.051 40.000 16.56 0.00 0.00 1.40
4083 6925 6.347402 GCGATGCATACGGTCACTTTATTAAT 60.347 38.462 16.56 0.00 0.00 1.40
4084 6926 7.572759 CGATGCATACGGTCACTTTATTAATT 58.427 34.615 0.00 0.00 0.00 1.40
4085 6927 8.705134 CGATGCATACGGTCACTTTATTAATTA 58.295 33.333 0.00 0.00 0.00 1.40
4093 6935 9.661563 ACGGTCACTTTATTAATTATTCTCACA 57.338 29.630 0.00 0.00 0.00 3.58
4107 6949 9.574516 AATTATTCTCACAAGACCTTACAAAGT 57.425 29.630 0.00 0.00 0.00 2.66
4112 6954 9.485206 TTCTCACAAGACCTTACAAAGTAATAC 57.515 33.333 0.00 0.00 0.00 1.89
4113 6955 8.644216 TCTCACAAGACCTTACAAAGTAATACA 58.356 33.333 0.00 0.00 0.00 2.29
4114 6956 9.268268 CTCACAAGACCTTACAAAGTAATACAA 57.732 33.333 0.00 0.00 0.00 2.41
4115 6957 9.048446 TCACAAGACCTTACAAAGTAATACAAC 57.952 33.333 0.00 0.00 0.00 3.32
4116 6958 8.832521 CACAAGACCTTACAAAGTAATACAACA 58.167 33.333 0.00 0.00 0.00 3.33
4117 6959 9.398538 ACAAGACCTTACAAAGTAATACAACAA 57.601 29.630 0.00 0.00 0.00 2.83
4131 6973 9.095065 AGTAATACAACAATAAGACTAAAGCCG 57.905 33.333 0.00 0.00 0.00 5.52
4132 6974 4.680171 ACAACAATAAGACTAAAGCCGC 57.320 40.909 0.00 0.00 0.00 6.53
4133 6975 3.439129 ACAACAATAAGACTAAAGCCGCC 59.561 43.478 0.00 0.00 0.00 6.13
4134 6976 2.277084 ACAATAAGACTAAAGCCGCCG 58.723 47.619 0.00 0.00 0.00 6.46
4135 6977 2.277084 CAATAAGACTAAAGCCGCCGT 58.723 47.619 0.00 0.00 0.00 5.68
4136 6978 2.220479 ATAAGACTAAAGCCGCCGTC 57.780 50.000 0.00 0.00 0.00 4.79
4137 6979 1.180029 TAAGACTAAAGCCGCCGTCT 58.820 50.000 0.00 0.00 38.29 4.18
4138 6980 1.180029 AAGACTAAAGCCGCCGTCTA 58.820 50.000 0.00 0.00 35.82 2.59
4139 6981 1.180029 AGACTAAAGCCGCCGTCTAA 58.820 50.000 0.00 0.00 35.15 2.10
4140 6982 1.134560 AGACTAAAGCCGCCGTCTAAG 59.865 52.381 0.00 0.00 35.15 2.18
4141 6983 0.459759 ACTAAAGCCGCCGTCTAAGC 60.460 55.000 0.00 0.00 0.00 3.09
4142 6984 0.459585 CTAAAGCCGCCGTCTAAGCA 60.460 55.000 0.00 0.00 0.00 3.91
4143 6985 0.037139 TAAAGCCGCCGTCTAAGCAA 60.037 50.000 0.00 0.00 0.00 3.91
4144 6986 1.574702 AAAGCCGCCGTCTAAGCAAC 61.575 55.000 0.00 0.00 0.00 4.17
4145 6987 2.434359 GCCGCCGTCTAAGCAACT 60.434 61.111 0.00 0.00 0.00 3.16
4146 6988 2.453638 GCCGCCGTCTAAGCAACTC 61.454 63.158 0.00 0.00 0.00 3.01
4147 6989 1.215647 CCGCCGTCTAAGCAACTCT 59.784 57.895 0.00 0.00 0.00 3.24
4148 6990 0.454600 CCGCCGTCTAAGCAACTCTA 59.545 55.000 0.00 0.00 0.00 2.43
4149 6991 1.067212 CCGCCGTCTAAGCAACTCTAT 59.933 52.381 0.00 0.00 0.00 1.98
4150 6992 2.386249 CGCCGTCTAAGCAACTCTATC 58.614 52.381 0.00 0.00 0.00 2.08
4151 6993 2.745102 GCCGTCTAAGCAACTCTATCC 58.255 52.381 0.00 0.00 0.00 2.59
4152 6994 2.100916 GCCGTCTAAGCAACTCTATCCA 59.899 50.000 0.00 0.00 0.00 3.41
4153 6995 3.797184 GCCGTCTAAGCAACTCTATCCAG 60.797 52.174 0.00 0.00 0.00 3.86
4154 6996 3.381908 CCGTCTAAGCAACTCTATCCAGT 59.618 47.826 0.00 0.00 0.00 4.00
4155 6997 4.142138 CCGTCTAAGCAACTCTATCCAGTT 60.142 45.833 0.00 0.00 37.05 3.16
4164 7006 5.365021 AACTCTATCCAGTTGATGAAGGG 57.635 43.478 0.00 0.00 35.18 3.95
4165 7007 3.713764 ACTCTATCCAGTTGATGAAGGGG 59.286 47.826 0.00 0.00 34.76 4.79
4166 7008 2.439507 TCTATCCAGTTGATGAAGGGGC 59.560 50.000 0.00 0.00 34.76 5.80
4167 7009 0.107017 ATCCAGTTGATGAAGGGGCG 60.107 55.000 0.00 0.00 30.54 6.13
4168 7010 2.409870 CCAGTTGATGAAGGGGCGC 61.410 63.158 0.00 0.00 0.00 6.53
4169 7011 1.675310 CAGTTGATGAAGGGGCGCA 60.675 57.895 10.83 0.00 0.00 6.09
4170 7012 1.377725 AGTTGATGAAGGGGCGCAG 60.378 57.895 10.83 0.00 0.00 5.18
4171 7013 1.377202 GTTGATGAAGGGGCGCAGA 60.377 57.895 10.83 0.00 0.00 4.26
4172 7014 0.749454 GTTGATGAAGGGGCGCAGAT 60.749 55.000 10.83 0.00 0.00 2.90
4173 7015 0.836606 TTGATGAAGGGGCGCAGATA 59.163 50.000 10.83 0.00 0.00 1.98
4174 7016 0.394192 TGATGAAGGGGCGCAGATAG 59.606 55.000 10.83 0.00 0.00 2.08
4175 7017 0.952984 GATGAAGGGGCGCAGATAGC 60.953 60.000 10.83 0.00 40.87 2.97
4183 7025 3.554342 CGCAGATAGCCTGGGCCT 61.554 66.667 4.53 0.00 46.58 5.19
4184 7026 2.210013 CGCAGATAGCCTGGGCCTA 61.210 63.158 4.53 0.00 46.58 3.93
4185 7027 1.758440 CGCAGATAGCCTGGGCCTAA 61.758 60.000 4.53 0.00 46.58 2.69
4186 7028 0.695347 GCAGATAGCCTGGGCCTAAT 59.305 55.000 4.53 0.00 43.13 1.73
4187 7029 1.909302 GCAGATAGCCTGGGCCTAATA 59.091 52.381 4.53 0.00 43.13 0.98
4188 7030 2.355209 GCAGATAGCCTGGGCCTAATAC 60.355 54.545 4.53 0.00 43.13 1.89
4189 7031 2.237392 CAGATAGCCTGGGCCTAATACC 59.763 54.545 4.53 0.00 43.17 2.73
4190 7032 2.158004 AGATAGCCTGGGCCTAATACCA 60.158 50.000 4.53 0.00 43.17 3.25
4191 7033 2.199927 TAGCCTGGGCCTAATACCAA 57.800 50.000 4.53 0.00 43.17 3.67
4192 7034 1.304891 AGCCTGGGCCTAATACCAAA 58.695 50.000 4.53 0.00 43.17 3.28
4193 7035 1.063942 AGCCTGGGCCTAATACCAAAC 60.064 52.381 4.53 0.00 43.17 2.93
4194 7036 1.341581 GCCTGGGCCTAATACCAAACA 60.342 52.381 4.53 0.00 36.09 2.83
4195 7037 2.654863 CCTGGGCCTAATACCAAACAG 58.345 52.381 4.53 0.00 36.09 3.16
4196 7038 2.241176 CCTGGGCCTAATACCAAACAGA 59.759 50.000 4.53 0.00 36.09 3.41
4197 7039 3.279434 CTGGGCCTAATACCAAACAGAC 58.721 50.000 4.53 0.00 36.09 3.51
4198 7040 2.645297 TGGGCCTAATACCAAACAGACA 59.355 45.455 4.53 0.00 32.89 3.41
4199 7041 3.268334 TGGGCCTAATACCAAACAGACAT 59.732 43.478 4.53 0.00 32.89 3.06
4200 7042 3.883489 GGGCCTAATACCAAACAGACATC 59.117 47.826 0.84 0.00 0.00 3.06
4201 7043 3.560068 GGCCTAATACCAAACAGACATCG 59.440 47.826 0.00 0.00 0.00 3.84
4202 7044 3.002348 GCCTAATACCAAACAGACATCGC 59.998 47.826 0.00 0.00 0.00 4.58
4203 7045 4.188462 CCTAATACCAAACAGACATCGCA 58.812 43.478 0.00 0.00 0.00 5.10
4204 7046 4.634004 CCTAATACCAAACAGACATCGCAA 59.366 41.667 0.00 0.00 0.00 4.85
4205 7047 4.419522 AATACCAAACAGACATCGCAAC 57.580 40.909 0.00 0.00 0.00 4.17
4206 7048 1.967319 ACCAAACAGACATCGCAACT 58.033 45.000 0.00 0.00 0.00 3.16
4207 7049 3.120321 ACCAAACAGACATCGCAACTA 57.880 42.857 0.00 0.00 0.00 2.24
4208 7050 3.472652 ACCAAACAGACATCGCAACTAA 58.527 40.909 0.00 0.00 0.00 2.24
4209 7051 3.880490 ACCAAACAGACATCGCAACTAAA 59.120 39.130 0.00 0.00 0.00 1.85
4210 7052 4.219033 CCAAACAGACATCGCAACTAAAC 58.781 43.478 0.00 0.00 0.00 2.01
4211 7053 4.219033 CAAACAGACATCGCAACTAAACC 58.781 43.478 0.00 0.00 0.00 3.27
4212 7054 3.402628 ACAGACATCGCAACTAAACCT 57.597 42.857 0.00 0.00 0.00 3.50
4213 7055 4.530710 ACAGACATCGCAACTAAACCTA 57.469 40.909 0.00 0.00 0.00 3.08
4214 7056 4.890088 ACAGACATCGCAACTAAACCTAA 58.110 39.130 0.00 0.00 0.00 2.69
4215 7057 4.689345 ACAGACATCGCAACTAAACCTAAC 59.311 41.667 0.00 0.00 0.00 2.34
4216 7058 4.688879 CAGACATCGCAACTAAACCTAACA 59.311 41.667 0.00 0.00 0.00 2.41
4217 7059 5.351465 CAGACATCGCAACTAAACCTAACAT 59.649 40.000 0.00 0.00 0.00 2.71
4218 7060 5.581085 AGACATCGCAACTAAACCTAACATC 59.419 40.000 0.00 0.00 0.00 3.06
4219 7061 5.488341 ACATCGCAACTAAACCTAACATCT 58.512 37.500 0.00 0.00 0.00 2.90
4220 7062 6.636705 ACATCGCAACTAAACCTAACATCTA 58.363 36.000 0.00 0.00 0.00 1.98
4221 7063 7.101054 ACATCGCAACTAAACCTAACATCTAA 58.899 34.615 0.00 0.00 0.00 2.10
4222 7064 7.277981 ACATCGCAACTAAACCTAACATCTAAG 59.722 37.037 0.00 0.00 0.00 2.18
4223 7065 6.927416 TCGCAACTAAACCTAACATCTAAGA 58.073 36.000 0.00 0.00 0.00 2.10
4224 7066 6.810182 TCGCAACTAAACCTAACATCTAAGAC 59.190 38.462 0.00 0.00 0.00 3.01
4225 7067 6.035758 CGCAACTAAACCTAACATCTAAGACC 59.964 42.308 0.00 0.00 0.00 3.85
4226 7068 7.104290 GCAACTAAACCTAACATCTAAGACCT 58.896 38.462 0.00 0.00 0.00 3.85
4227 7069 8.255905 GCAACTAAACCTAACATCTAAGACCTA 58.744 37.037 0.00 0.00 0.00 3.08
4233 7075 7.362802 ACCTAACATCTAAGACCTAATGTCC 57.637 40.000 0.00 0.00 45.68 4.02
4234 7076 6.326843 ACCTAACATCTAAGACCTAATGTCCC 59.673 42.308 0.00 0.00 45.68 4.46
4235 7077 6.326583 CCTAACATCTAAGACCTAATGTCCCA 59.673 42.308 0.00 0.00 45.68 4.37
4236 7078 6.831664 AACATCTAAGACCTAATGTCCCAT 57.168 37.500 0.00 0.00 45.68 4.00
4237 7079 6.831664 ACATCTAAGACCTAATGTCCCATT 57.168 37.500 0.00 0.00 45.68 3.16
4238 7080 7.213178 ACATCTAAGACCTAATGTCCCATTT 57.787 36.000 0.00 0.00 45.68 2.32
4239 7081 8.331931 ACATCTAAGACCTAATGTCCCATTTA 57.668 34.615 0.00 0.00 45.68 1.40
4240 7082 8.432805 ACATCTAAGACCTAATGTCCCATTTAG 58.567 37.037 0.00 0.00 45.68 1.85
4241 7083 7.374975 TCTAAGACCTAATGTCCCATTTAGG 57.625 40.000 7.09 7.09 46.57 2.69
4242 7084 7.136885 TCTAAGACCTAATGTCCCATTTAGGA 58.863 38.462 14.04 0.00 44.84 2.94
4248 7090 3.080647 GTCCCATTTAGGACGCCTG 57.919 57.895 8.44 0.00 46.57 4.85
4249 7091 1.095807 GTCCCATTTAGGACGCCTGC 61.096 60.000 8.44 0.00 46.57 4.85
4250 7092 1.823899 CCCATTTAGGACGCCTGCC 60.824 63.158 8.44 0.00 41.22 4.85
4251 7093 2.180204 CCATTTAGGACGCCTGCCG 61.180 63.158 8.44 0.00 41.22 5.69
4252 7094 1.153449 CATTTAGGACGCCTGCCGA 60.153 57.895 8.44 0.00 41.02 5.54
4253 7095 1.144057 ATTTAGGACGCCTGCCGAG 59.856 57.895 8.44 0.00 41.02 4.63
4254 7096 2.925162 ATTTAGGACGCCTGCCGAGC 62.925 60.000 8.44 0.00 41.02 5.03
4262 7104 3.790437 CCTGCCGAGCATGGGTCT 61.790 66.667 0.00 0.00 38.13 3.85
4263 7105 2.202987 CTGCCGAGCATGGGTCTC 60.203 66.667 0.00 0.00 38.13 3.36
4264 7106 3.002583 TGCCGAGCATGGGTCTCA 61.003 61.111 0.00 0.00 35.77 3.27
4265 7107 2.512515 GCCGAGCATGGGTCTCAC 60.513 66.667 0.00 0.00 35.77 3.51
4266 7108 2.187946 CCGAGCATGGGTCTCACC 59.812 66.667 0.00 0.00 37.60 4.02
4267 7109 2.202797 CGAGCATGGGTCTCACCG 60.203 66.667 0.00 0.00 39.83 4.94
4268 7110 2.187946 GAGCATGGGTCTCACCGG 59.812 66.667 0.00 0.00 39.83 5.28
4269 7111 2.607750 AGCATGGGTCTCACCGGT 60.608 61.111 0.00 0.00 39.83 5.28
4270 7112 2.125106 GCATGGGTCTCACCGGTC 60.125 66.667 2.59 0.00 39.83 4.79
4271 7113 2.584608 CATGGGTCTCACCGGTCC 59.415 66.667 2.59 1.82 39.83 4.46
4272 7114 3.075005 ATGGGTCTCACCGGTCCG 61.075 66.667 2.59 3.60 39.83 4.79
4285 7127 4.357947 GTCCGGCGTGCACTCAGA 62.358 66.667 16.19 4.96 0.00 3.27
4286 7128 4.056125 TCCGGCGTGCACTCAGAG 62.056 66.667 16.19 0.00 0.00 3.35
4290 7132 4.687215 GCGTGCACTCAGAGGCCA 62.687 66.667 16.19 0.00 0.00 5.36
4291 7133 2.740055 CGTGCACTCAGAGGCCAC 60.740 66.667 16.19 0.00 0.00 5.01
4292 7134 2.359230 GTGCACTCAGAGGCCACC 60.359 66.667 10.32 0.00 0.00 4.61
4293 7135 4.007644 TGCACTCAGAGGCCACCG 62.008 66.667 5.01 0.00 0.00 4.94
4314 7156 4.641645 CCAACTGCCACCGCTCCA 62.642 66.667 0.00 0.00 35.36 3.86
4315 7157 2.360350 CAACTGCCACCGCTCCAT 60.360 61.111 0.00 0.00 35.36 3.41
4316 7158 2.045926 AACTGCCACCGCTCCATC 60.046 61.111 0.00 0.00 35.36 3.51
4317 7159 2.596851 AACTGCCACCGCTCCATCT 61.597 57.895 0.00 0.00 35.36 2.90
4318 7160 2.129555 AACTGCCACCGCTCCATCTT 62.130 55.000 0.00 0.00 35.36 2.40
4319 7161 1.817099 CTGCCACCGCTCCATCTTC 60.817 63.158 0.00 0.00 35.36 2.87
4320 7162 2.268920 GCCACCGCTCCATCTTCA 59.731 61.111 0.00 0.00 0.00 3.02
4321 7163 1.817099 GCCACCGCTCCATCTTCAG 60.817 63.158 0.00 0.00 0.00 3.02
4322 7164 1.900351 CCACCGCTCCATCTTCAGA 59.100 57.895 0.00 0.00 0.00 3.27
4323 7165 0.250234 CCACCGCTCCATCTTCAGAA 59.750 55.000 0.00 0.00 0.00 3.02
4324 7166 1.363744 CACCGCTCCATCTTCAGAAC 58.636 55.000 0.00 0.00 0.00 3.01
4325 7167 1.066573 CACCGCTCCATCTTCAGAACT 60.067 52.381 0.00 0.00 0.00 3.01
4326 7168 1.066573 ACCGCTCCATCTTCAGAACTG 60.067 52.381 0.00 0.00 0.00 3.16
4327 7169 1.066573 CCGCTCCATCTTCAGAACTGT 60.067 52.381 1.73 0.00 0.00 3.55
4328 7170 2.166459 CCGCTCCATCTTCAGAACTGTA 59.834 50.000 1.73 0.00 0.00 2.74
4329 7171 3.182967 CGCTCCATCTTCAGAACTGTAC 58.817 50.000 1.73 0.00 0.00 2.90
4330 7172 3.119316 CGCTCCATCTTCAGAACTGTACT 60.119 47.826 1.73 0.00 0.00 2.73
4331 7173 4.180057 GCTCCATCTTCAGAACTGTACTG 58.820 47.826 0.00 0.00 36.80 2.74
4332 7174 4.081972 GCTCCATCTTCAGAACTGTACTGA 60.082 45.833 6.77 0.00 41.70 3.41
4333 7175 5.395103 GCTCCATCTTCAGAACTGTACTGAT 60.395 44.000 6.77 0.00 42.68 2.90
4334 7176 5.970592 TCCATCTTCAGAACTGTACTGATG 58.029 41.667 6.77 0.00 42.68 3.07
4335 7177 4.569966 CCATCTTCAGAACTGTACTGATGC 59.430 45.833 6.77 0.00 42.68 3.91
4336 7178 4.871933 TCTTCAGAACTGTACTGATGCA 57.128 40.909 6.77 0.00 42.68 3.96
4337 7179 5.411831 TCTTCAGAACTGTACTGATGCAT 57.588 39.130 0.00 0.00 42.68 3.96
4338 7180 5.414360 TCTTCAGAACTGTACTGATGCATC 58.586 41.667 20.14 20.14 42.68 3.91
4339 7181 4.806640 TCAGAACTGTACTGATGCATCA 57.193 40.909 27.10 27.10 39.10 3.07
4340 7182 5.151297 TCAGAACTGTACTGATGCATCAA 57.849 39.130 28.39 13.65 39.10 2.57
4341 7183 4.931601 TCAGAACTGTACTGATGCATCAAC 59.068 41.667 28.39 23.87 39.10 3.18
4342 7184 4.093998 CAGAACTGTACTGATGCATCAACC 59.906 45.833 28.39 18.82 37.54 3.77
4343 7185 3.988976 ACTGTACTGATGCATCAACCT 57.011 42.857 28.39 16.49 36.18 3.50
4344 7186 4.292186 ACTGTACTGATGCATCAACCTT 57.708 40.909 28.39 15.80 36.18 3.50
4345 7187 4.005650 ACTGTACTGATGCATCAACCTTG 58.994 43.478 28.39 18.95 36.18 3.61
4346 7188 2.749076 TGTACTGATGCATCAACCTTGC 59.251 45.455 28.39 16.65 40.55 4.01
4347 7189 2.211250 ACTGATGCATCAACCTTGCT 57.789 45.000 28.39 6.52 40.77 3.91
4348 7190 2.089980 ACTGATGCATCAACCTTGCTC 58.910 47.619 28.39 0.00 40.77 4.26
4349 7191 1.063616 CTGATGCATCAACCTTGCTCG 59.936 52.381 28.39 11.12 40.77 5.03
4350 7192 0.379669 GATGCATCAACCTTGCTCGG 59.620 55.000 21.92 0.00 40.77 4.63
4351 7193 0.322816 ATGCATCAACCTTGCTCGGT 60.323 50.000 0.00 0.00 40.77 4.69
4352 7194 0.955428 TGCATCAACCTTGCTCGGTC 60.955 55.000 0.00 0.00 40.77 4.79
4353 7195 1.648467 GCATCAACCTTGCTCGGTCC 61.648 60.000 0.00 0.00 35.89 4.46
4354 7196 0.321564 CATCAACCTTGCTCGGTCCA 60.322 55.000 0.00 0.00 35.89 4.02
4355 7197 0.036010 ATCAACCTTGCTCGGTCCAG 60.036 55.000 0.00 0.00 35.89 3.86
4356 7198 2.032681 AACCTTGCTCGGTCCAGC 59.967 61.111 6.41 6.41 35.89 4.85
4357 7199 2.520536 AACCTTGCTCGGTCCAGCT 61.521 57.895 12.62 0.00 40.39 4.24
4358 7200 1.192146 AACCTTGCTCGGTCCAGCTA 61.192 55.000 12.62 6.21 40.39 3.32
4359 7201 0.978146 ACCTTGCTCGGTCCAGCTAT 60.978 55.000 12.62 0.00 40.39 2.97
4360 7202 0.249657 CCTTGCTCGGTCCAGCTATC 60.250 60.000 12.62 0.00 40.39 2.08
4361 7203 0.461548 CTTGCTCGGTCCAGCTATCA 59.538 55.000 12.62 0.00 40.39 2.15
4362 7204 1.069823 CTTGCTCGGTCCAGCTATCAT 59.930 52.381 12.62 0.00 40.39 2.45
4363 7205 0.676184 TGCTCGGTCCAGCTATCATC 59.324 55.000 12.62 0.00 40.39 2.92
4364 7206 0.387878 GCTCGGTCCAGCTATCATCG 60.388 60.000 6.17 0.00 36.38 3.84
4365 7207 1.239347 CTCGGTCCAGCTATCATCGA 58.761 55.000 0.00 0.00 0.00 3.59
4366 7208 1.815613 CTCGGTCCAGCTATCATCGAT 59.184 52.381 0.00 0.00 0.00 3.59
4367 7209 1.541588 TCGGTCCAGCTATCATCGATG 59.458 52.381 19.61 19.61 0.00 3.84
4368 7210 1.719600 GGTCCAGCTATCATCGATGC 58.280 55.000 20.81 8.96 0.00 3.91
4369 7211 1.674221 GGTCCAGCTATCATCGATGCC 60.674 57.143 20.81 8.70 0.00 4.40
4370 7212 1.001293 GTCCAGCTATCATCGATGCCA 59.999 52.381 20.81 9.34 0.00 4.92
4371 7213 1.001293 TCCAGCTATCATCGATGCCAC 59.999 52.381 20.81 9.61 0.00 5.01
4372 7214 1.436600 CAGCTATCATCGATGCCACC 58.563 55.000 20.81 8.88 0.00 4.61
4373 7215 1.051008 AGCTATCATCGATGCCACCA 58.949 50.000 20.81 3.17 0.00 4.17
4374 7216 1.151668 GCTATCATCGATGCCACCAC 58.848 55.000 20.81 4.10 0.00 4.16
4375 7217 1.422388 CTATCATCGATGCCACCACG 58.578 55.000 20.81 1.02 0.00 4.94
4376 7218 0.033366 TATCATCGATGCCACCACGG 59.967 55.000 20.81 0.00 38.11 4.94
4396 7238 4.410400 CCCAACGGCACCTCCTCC 62.410 72.222 0.00 0.00 0.00 4.30
4397 7239 4.410400 CCAACGGCACCTCCTCCC 62.410 72.222 0.00 0.00 0.00 4.30
4398 7240 3.322466 CAACGGCACCTCCTCCCT 61.322 66.667 0.00 0.00 0.00 4.20
4399 7241 3.322466 AACGGCACCTCCTCCCTG 61.322 66.667 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.030274 CCGGGAATCGAATTATTTGGGC 60.030 50.000 0.00 0.00 42.43 5.36
1 2 3.219281 ACCGGGAATCGAATTATTTGGG 58.781 45.455 6.32 0.00 42.43 4.12
2 3 4.214758 GGTACCGGGAATCGAATTATTTGG 59.785 45.833 6.32 0.00 42.43 3.28
3 4 4.084223 CGGTACCGGGAATCGAATTATTTG 60.084 45.833 27.00 0.00 42.43 2.32
5 6 3.656559 CGGTACCGGGAATCGAATTATT 58.343 45.455 27.00 0.00 42.43 1.40
6 7 2.611224 GCGGTACCGGGAATCGAATTAT 60.611 50.000 33.98 0.00 42.43 1.28
7 8 1.269726 GCGGTACCGGGAATCGAATTA 60.270 52.381 33.98 0.00 42.43 1.40
8 9 0.531311 GCGGTACCGGGAATCGAATT 60.531 55.000 33.98 0.00 42.43 2.17
9 10 1.068585 GCGGTACCGGGAATCGAAT 59.931 57.895 33.98 0.00 42.43 3.34
10 11 2.495866 GCGGTACCGGGAATCGAA 59.504 61.111 33.98 0.00 42.43 3.71
35 36 4.767255 GGTCAGCCGGAGCACAGG 62.767 72.222 5.05 0.00 43.54 4.00
45 46 2.124570 ATGCATCACCGGTCAGCC 60.125 61.111 2.59 0.00 0.00 4.85
46 47 2.528743 CGATGCATCACCGGTCAGC 61.529 63.158 25.70 10.09 0.00 4.26
47 48 1.884464 CCGATGCATCACCGGTCAG 60.884 63.158 25.70 7.19 38.55 3.51
48 49 2.186644 CCGATGCATCACCGGTCA 59.813 61.111 25.70 0.00 38.55 4.02
49 50 2.588877 CCCGATGCATCACCGGTC 60.589 66.667 25.70 0.00 41.53 4.79
50 51 4.856801 GCCCGATGCATCACCGGT 62.857 66.667 25.70 0.00 41.53 5.28
52 53 4.854924 TGGCCCGATGCATCACCG 62.855 66.667 25.70 12.99 43.89 4.94
53 54 2.203394 ATGGCCCGATGCATCACC 60.203 61.111 25.70 21.89 43.89 4.02
54 55 3.036577 CATGGCCCGATGCATCAC 58.963 61.111 25.70 14.14 43.89 3.06
55 56 2.908428 GCATGGCCCGATGCATCA 60.908 61.111 25.70 7.50 46.77 3.07
60 61 1.750018 TGAACAGCATGGCCCGATG 60.750 57.895 0.00 2.49 43.62 3.84
61 62 1.750399 GTGAACAGCATGGCCCGAT 60.750 57.895 0.00 0.00 43.62 4.18
62 63 2.359850 GTGAACAGCATGGCCCGA 60.360 61.111 0.00 0.00 43.62 5.14
63 64 3.803082 CGTGAACAGCATGGCCCG 61.803 66.667 0.00 0.00 43.62 6.13
64 65 3.443045 CCGTGAACAGCATGGCCC 61.443 66.667 0.00 0.00 46.16 5.80
68 69 2.034066 ACCCCCGTGAACAGCATG 59.966 61.111 0.00 0.00 46.00 4.06
69 70 2.034066 CACCCCCGTGAACAGCAT 59.966 61.111 0.00 0.00 43.14 3.79
70 71 3.484806 ACACCCCCGTGAACAGCA 61.485 61.111 0.00 0.00 43.14 4.41
71 72 2.978010 CACACCCCCGTGAACAGC 60.978 66.667 0.00 0.00 43.14 4.40
72 73 2.978010 GCACACCCCCGTGAACAG 60.978 66.667 0.00 0.00 43.14 3.16
73 74 4.920112 CGCACACCCCCGTGAACA 62.920 66.667 0.00 0.00 43.14 3.18
74 75 3.894547 ATCGCACACCCCCGTGAAC 62.895 63.158 0.00 0.00 43.14 3.18
75 76 3.632080 ATCGCACACCCCCGTGAA 61.632 61.111 0.00 0.00 43.14 3.18
76 77 4.386951 CATCGCACACCCCCGTGA 62.387 66.667 0.00 0.00 43.14 4.35
77 78 3.680620 ATCATCGCACACCCCCGTG 62.681 63.158 0.00 0.00 46.11 4.94
78 79 2.966732 AATCATCGCACACCCCCGT 61.967 57.895 0.00 0.00 0.00 5.28
79 80 2.124736 AATCATCGCACACCCCCG 60.125 61.111 0.00 0.00 0.00 5.73
80 81 1.376609 GACAATCATCGCACACCCCC 61.377 60.000 0.00 0.00 0.00 5.40
81 82 0.392998 AGACAATCATCGCACACCCC 60.393 55.000 0.00 0.00 0.00 4.95
82 83 0.729116 CAGACAATCATCGCACACCC 59.271 55.000 0.00 0.00 0.00 4.61
83 84 0.729116 CCAGACAATCATCGCACACC 59.271 55.000 0.00 0.00 0.00 4.16
84 85 0.729116 CCCAGACAATCATCGCACAC 59.271 55.000 0.00 0.00 0.00 3.82
85 86 0.392863 CCCCAGACAATCATCGCACA 60.393 55.000 0.00 0.00 0.00 4.57
86 87 1.097547 CCCCCAGACAATCATCGCAC 61.098 60.000 0.00 0.00 0.00 5.34
87 88 1.224315 CCCCCAGACAATCATCGCA 59.776 57.895 0.00 0.00 0.00 5.10
88 89 2.189499 GCCCCCAGACAATCATCGC 61.189 63.158 0.00 0.00 0.00 4.58
89 90 0.179009 ATGCCCCCAGACAATCATCG 60.179 55.000 0.00 0.00 0.00 3.84
90 91 2.077687 AATGCCCCCAGACAATCATC 57.922 50.000 0.00 0.00 0.00 2.92
91 92 2.023695 AGAAATGCCCCCAGACAATCAT 60.024 45.455 0.00 0.00 0.00 2.45
92 93 1.358787 AGAAATGCCCCCAGACAATCA 59.641 47.619 0.00 0.00 0.00 2.57
93 94 2.149973 AGAAATGCCCCCAGACAATC 57.850 50.000 0.00 0.00 0.00 2.67
94 95 2.181975 CAAGAAATGCCCCCAGACAAT 58.818 47.619 0.00 0.00 0.00 2.71
95 96 1.631405 CAAGAAATGCCCCCAGACAA 58.369 50.000 0.00 0.00 0.00 3.18
96 97 3.362040 CAAGAAATGCCCCCAGACA 57.638 52.632 0.00 0.00 0.00 3.41
105 106 5.243283 AGATGATTATCAGGGCAAGAAATGC 59.757 40.000 0.29 0.00 44.01 3.56
106 107 6.294564 CCAGATGATTATCAGGGCAAGAAATG 60.295 42.308 0.29 0.00 36.59 2.32
107 108 5.773680 CCAGATGATTATCAGGGCAAGAAAT 59.226 40.000 0.29 0.00 36.59 2.17
108 109 5.135383 CCAGATGATTATCAGGGCAAGAAA 58.865 41.667 0.29 0.00 36.59 2.52
109 110 4.722220 CCAGATGATTATCAGGGCAAGAA 58.278 43.478 0.29 0.00 36.59 2.52
110 111 4.362470 CCAGATGATTATCAGGGCAAGA 57.638 45.455 0.29 0.00 36.59 3.02
116 117 2.693069 GTCGCCCAGATGATTATCAGG 58.307 52.381 0.29 2.21 39.13 3.86
117 118 2.029918 TCGTCGCCCAGATGATTATCAG 60.030 50.000 0.29 0.00 39.80 2.90
118 119 1.960689 TCGTCGCCCAGATGATTATCA 59.039 47.619 0.00 0.00 39.80 2.15
119 120 2.724977 TCGTCGCCCAGATGATTATC 57.275 50.000 0.00 0.00 39.80 1.75
146 148 1.065418 CAAGAAACCCATAGCTCCGGT 60.065 52.381 0.00 0.00 0.00 5.28
147 149 1.668419 CAAGAAACCCATAGCTCCGG 58.332 55.000 0.00 0.00 0.00 5.14
148 150 1.017387 GCAAGAAACCCATAGCTCCG 58.983 55.000 0.00 0.00 0.00 4.63
159 164 1.154225 CGGATGGCGTGCAAGAAAC 60.154 57.895 2.99 0.00 0.00 2.78
190 195 0.251916 AAATCGAATCCGCAGTCCCA 59.748 50.000 0.00 0.00 35.37 4.37
254 259 2.096980 CACCATGCAATGCTACTCACTG 59.903 50.000 6.82 0.00 44.97 3.66
285 290 3.643978 CGCTAGCGCTGCCAATCC 61.644 66.667 26.07 0.00 0.00 3.01
379 384 9.236006 ACTTATCTAAGCTTATAAATGGGCATG 57.764 33.333 6.64 0.00 36.79 4.06
531 542 7.162082 GGAACTCCAAGTAGAAGAAGAATTCA 58.838 38.462 8.44 0.00 41.33 2.57
589 600 4.650734 TCAGATGCCAATAGAACACACAA 58.349 39.130 0.00 0.00 0.00 3.33
592 603 3.264193 ACCTCAGATGCCAATAGAACACA 59.736 43.478 0.00 0.00 0.00 3.72
653 664 5.958380 TGAGGAGAGGTTGACAGTATACAAT 59.042 40.000 5.50 0.00 0.00 2.71
796 807 3.116862 ACCTCCGGACCTTAGGATCAATA 60.117 47.826 13.33 0.00 35.75 1.90
797 808 2.330216 CCTCCGGACCTTAGGATCAAT 58.670 52.381 4.77 0.00 35.75 2.57
798 809 1.007963 ACCTCCGGACCTTAGGATCAA 59.992 52.381 13.33 0.00 35.75 2.57
800 811 1.790818 AACCTCCGGACCTTAGGATC 58.209 55.000 13.33 0.00 35.75 3.36
802 813 1.063417 CCTAACCTCCGGACCTTAGGA 60.063 57.143 25.99 1.63 38.25 2.94
899 927 8.223100 GCTTACACAATCACCAAATTTTGAATC 58.777 33.333 10.72 0.00 0.00 2.52
1113 1141 2.028125 TTCCATAAGCTCCTCGGCCG 62.028 60.000 22.12 22.12 0.00 6.13
1395 1423 6.418057 AAAAGAAAATATTGGCAGTGGTCA 57.582 33.333 0.00 0.00 0.00 4.02
1558 1591 7.051623 AGTGAACTTGCGAATATAATGGGTAA 58.948 34.615 0.00 0.00 0.00 2.85
1559 1592 6.588204 AGTGAACTTGCGAATATAATGGGTA 58.412 36.000 0.00 0.00 0.00 3.69
1562 1595 6.851222 AGAGTGAACTTGCGAATATAATGG 57.149 37.500 0.00 0.00 0.00 3.16
1563 1596 8.581057 ACTAGAGTGAACTTGCGAATATAATG 57.419 34.615 0.00 0.00 0.00 1.90
1578 1617 7.345653 ACCATCCTTGATGAATACTAGAGTGAA 59.654 37.037 5.67 0.00 42.09 3.18
1587 1626 9.262358 GACTAAAGTACCATCCTTGATGAATAC 57.738 37.037 5.67 7.68 42.09 1.89
1712 1751 5.972107 AAGAAGTTCATGGTTGGATTGAG 57.028 39.130 5.50 0.00 0.00 3.02
1806 1949 1.401761 TGACATGCCAAGTTGCACTT 58.598 45.000 0.00 0.00 45.48 3.16
1822 1965 4.940046 AGAATCACACAGGATGACAATGAC 59.060 41.667 0.00 0.00 39.69 3.06
1825 1968 4.263639 ACCAGAATCACACAGGATGACAAT 60.264 41.667 0.00 0.00 39.69 2.71
1861 2004 3.888930 TCAAAACCCATTGAGTGAAGGAC 59.111 43.478 0.00 0.00 34.50 3.85
1914 2057 1.452145 GCAACCTGGGCTTCGAAACA 61.452 55.000 0.00 0.00 0.00 2.83
1920 2063 3.376918 GGCTGCAACCTGGGCTTC 61.377 66.667 0.50 0.00 0.00 3.86
2024 2170 7.844009 ACAATATATTCCATGCCATCCAATTC 58.156 34.615 0.00 0.00 0.00 2.17
2056 2207 6.072673 ACCAAAGCGTAATAGAAAAGGTGAAG 60.073 38.462 0.00 0.00 0.00 3.02
2072 2223 8.800231 ACGTTTAAAAATAAATACCAAAGCGT 57.200 26.923 0.00 0.00 0.00 5.07
2165 2329 0.036105 ATGCCTCGCAATGTGACTGA 60.036 50.000 0.00 0.00 43.62 3.41
2239 2408 5.716703 AGAAGGTGCTAATTTTAGGTTGCAT 59.283 36.000 0.00 0.00 32.98 3.96
2302 2471 3.412237 TTGGTAAGTCTGGCTGTTACC 57.588 47.619 13.61 13.61 44.12 2.85
2602 3119 6.007076 TGAAGCACAAGGGTCACATAAATTA 58.993 36.000 0.00 0.00 0.00 1.40
2612 3129 3.826729 AGGTTAAATGAAGCACAAGGGTC 59.173 43.478 0.00 0.00 38.05 4.46
3213 3741 4.566907 GCCTGGGTAACACTGATCCTTTTA 60.567 45.833 0.00 0.00 39.74 1.52
3243 3771 3.191888 AGAGGAGACATGTAAGGGTGT 57.808 47.619 0.00 0.00 0.00 4.16
3264 3792 2.158385 AGGGTTTGCACTTGGGTCATAA 60.158 45.455 0.00 0.00 0.00 1.90
3477 4005 7.728148 TGGTTACTTAATAGGTGCGATAATCA 58.272 34.615 0.00 0.00 0.00 2.57
3503 4031 3.157949 TCCCCACACTGCACGTCA 61.158 61.111 0.00 0.00 0.00 4.35
3550 4078 5.140747 AGAACTATCCATATGCGGTTCTC 57.859 43.478 17.16 4.48 38.98 2.87
3559 4087 8.157476 GTGGTCCATAACAAGAACTATCCATAT 58.843 37.037 0.00 0.00 0.00 1.78
3560 4088 7.347222 AGTGGTCCATAACAAGAACTATCCATA 59.653 37.037 0.00 0.00 0.00 2.74
3627 4157 5.296780 TGAATTCGCTTCAACAGTTCTTTCT 59.703 36.000 0.04 0.00 40.92 2.52
3662 4193 0.251341 ACAGGAGGGCCATCACAAAC 60.251 55.000 20.75 0.52 36.29 2.93
3783 4360 6.862209 TCAAATATCACCAAGGTTAACATGC 58.138 36.000 8.10 0.00 0.00 4.06
3791 4368 6.779860 AGTACACTTCAAATATCACCAAGGT 58.220 36.000 0.00 0.00 0.00 3.50
3852 6694 4.202274 TGTCTTGGAGTGATTAAACGTCCA 60.202 41.667 0.00 3.33 35.45 4.02
3855 6697 5.607477 TCTTGTCTTGGAGTGATTAAACGT 58.393 37.500 0.00 0.00 0.00 3.99
3874 6716 8.017946 GGCGCCTTAATTCTTATCTAATTCTTG 58.982 37.037 22.15 0.00 0.00 3.02
3880 6722 7.226720 CAGAAAGGCGCCTTAATTCTTATCTAA 59.773 37.037 40.29 0.00 34.84 2.10
3881 6723 6.706270 CAGAAAGGCGCCTTAATTCTTATCTA 59.294 38.462 40.29 0.00 34.84 1.98
3882 6724 5.529060 CAGAAAGGCGCCTTAATTCTTATCT 59.471 40.000 40.29 30.84 34.84 1.98
3883 6725 5.527582 TCAGAAAGGCGCCTTAATTCTTATC 59.472 40.000 40.29 29.24 34.84 1.75
3884 6726 5.297029 GTCAGAAAGGCGCCTTAATTCTTAT 59.703 40.000 40.29 23.25 34.84 1.73
3885 6727 4.634443 GTCAGAAAGGCGCCTTAATTCTTA 59.366 41.667 40.29 26.63 34.84 2.10
3886 6728 3.440522 GTCAGAAAGGCGCCTTAATTCTT 59.559 43.478 40.29 24.83 34.84 2.52
3887 6729 3.010420 GTCAGAAAGGCGCCTTAATTCT 58.990 45.455 40.29 33.60 34.84 2.40
3888 6730 2.747446 TGTCAGAAAGGCGCCTTAATTC 59.253 45.455 40.29 32.04 34.84 2.17
3889 6731 2.488153 GTGTCAGAAAGGCGCCTTAATT 59.512 45.455 40.29 26.42 34.84 1.40
3890 6732 2.084546 GTGTCAGAAAGGCGCCTTAAT 58.915 47.619 40.29 28.33 34.84 1.40
3897 6739 0.882042 ACTGCAGTGTCAGAAAGGCG 60.882 55.000 20.97 0.00 37.51 5.52
3904 6746 2.831333 ACTTTCAGACTGCAGTGTCAG 58.169 47.619 27.27 17.22 39.27 3.51
3909 6751 5.234466 AGGATTTACTTTCAGACTGCAGT 57.766 39.130 21.88 21.88 0.00 4.40
3935 6777 1.640917 TAAGGCGAGTCTCCCTGTTT 58.359 50.000 9.81 0.00 0.00 2.83
3940 6782 3.606687 TCAAAATTAAGGCGAGTCTCCC 58.393 45.455 0.00 0.00 0.00 4.30
3941 6783 5.622770 TTTCAAAATTAAGGCGAGTCTCC 57.377 39.130 0.00 0.00 0.00 3.71
3942 6784 5.089411 GCTTTCAAAATTAAGGCGAGTCTC 58.911 41.667 0.00 0.00 0.00 3.36
3944 6786 4.617223 GTGCTTTCAAAATTAAGGCGAGTC 59.383 41.667 0.00 0.00 32.04 3.36
3947 6789 4.576216 TGTGCTTTCAAAATTAAGGCGA 57.424 36.364 0.00 0.00 32.04 5.54
3969 6811 9.391006 GGGTTCATTCTTGTACAATCATAAGTA 57.609 33.333 9.13 0.00 0.00 2.24
3974 6816 6.484288 TCTGGGTTCATTCTTGTACAATCAT 58.516 36.000 9.13 1.29 0.00 2.45
3977 6819 5.183904 GCTTCTGGGTTCATTCTTGTACAAT 59.816 40.000 9.13 0.00 0.00 2.71
3978 6820 4.518970 GCTTCTGGGTTCATTCTTGTACAA 59.481 41.667 8.28 8.28 0.00 2.41
3979 6821 4.072131 GCTTCTGGGTTCATTCTTGTACA 58.928 43.478 0.00 0.00 0.00 2.90
4018 6860 5.778241 GGGGGTCATCTTCCTTTTCTAAAAA 59.222 40.000 0.00 0.00 0.00 1.94
4019 6861 5.330233 GGGGGTCATCTTCCTTTTCTAAAA 58.670 41.667 0.00 0.00 0.00 1.52
4020 6862 4.566907 CGGGGGTCATCTTCCTTTTCTAAA 60.567 45.833 0.00 0.00 0.00 1.85
4021 6863 3.054655 CGGGGGTCATCTTCCTTTTCTAA 60.055 47.826 0.00 0.00 0.00 2.10
4022 6864 2.504175 CGGGGGTCATCTTCCTTTTCTA 59.496 50.000 0.00 0.00 0.00 2.10
4023 6865 1.282157 CGGGGGTCATCTTCCTTTTCT 59.718 52.381 0.00 0.00 0.00 2.52
4024 6866 1.682087 CCGGGGGTCATCTTCCTTTTC 60.682 57.143 0.00 0.00 0.00 2.29
4025 6867 0.331616 CCGGGGGTCATCTTCCTTTT 59.668 55.000 0.00 0.00 0.00 2.27
4026 6868 1.999346 CCGGGGGTCATCTTCCTTT 59.001 57.895 0.00 0.00 0.00 3.11
4027 6869 2.680370 GCCGGGGGTCATCTTCCTT 61.680 63.158 2.18 0.00 0.00 3.36
4028 6870 3.090532 GCCGGGGGTCATCTTCCT 61.091 66.667 2.18 0.00 0.00 3.36
4029 6871 4.191015 GGCCGGGGGTCATCTTCC 62.191 72.222 2.18 0.00 0.00 3.46
4030 6872 3.090532 AGGCCGGGGGTCATCTTC 61.091 66.667 2.18 0.00 0.00 2.87
4031 6873 3.090532 GAGGCCGGGGGTCATCTT 61.091 66.667 2.18 0.00 0.00 2.40
4032 6874 4.095400 AGAGGCCGGGGGTCATCT 62.095 66.667 2.18 0.00 0.00 2.90
4033 6875 3.866582 CAGAGGCCGGGGGTCATC 61.867 72.222 2.18 0.00 0.00 2.92
4039 6881 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
4040 6882 3.457625 CTCAGATGCAGAGGCCGGG 62.458 68.421 2.18 0.00 40.13 5.73
4041 6883 2.108566 CTCAGATGCAGAGGCCGG 59.891 66.667 0.00 0.00 40.13 6.13
4042 6884 2.588314 GCTCAGATGCAGAGGCCG 60.588 66.667 0.00 0.00 40.13 6.13
4043 6885 2.380433 ATCGCTCAGATGCAGAGGCC 62.380 60.000 0.00 0.00 38.36 5.19
4044 6886 1.069427 ATCGCTCAGATGCAGAGGC 59.931 57.895 3.87 0.00 38.36 4.70
4052 6894 0.676184 ACCGTATGCATCGCTCAGAT 59.324 50.000 0.19 0.00 41.01 2.90
4053 6895 0.030773 GACCGTATGCATCGCTCAGA 59.969 55.000 0.19 0.00 0.00 3.27
4054 6896 0.249031 TGACCGTATGCATCGCTCAG 60.249 55.000 0.19 0.00 0.00 3.35
4055 6897 0.527600 GTGACCGTATGCATCGCTCA 60.528 55.000 0.19 7.40 0.00 4.26
4056 6898 0.249073 AGTGACCGTATGCATCGCTC 60.249 55.000 0.19 4.80 0.00 5.03
4057 6899 0.175760 AAGTGACCGTATGCATCGCT 59.824 50.000 0.19 0.00 34.72 4.93
4058 6900 1.006832 AAAGTGACCGTATGCATCGC 58.993 50.000 0.19 0.00 0.00 4.58
4059 6901 6.519353 TTAATAAAGTGACCGTATGCATCG 57.481 37.500 0.19 7.03 0.00 3.84
4067 6909 9.661563 TGTGAGAATAATTAATAAAGTGACCGT 57.338 29.630 0.00 0.00 0.00 4.83
4081 6923 9.574516 ACTTTGTAAGGTCTTGTGAGAATAATT 57.425 29.630 0.00 0.00 32.66 1.40
4086 6928 9.485206 GTATTACTTTGTAAGGTCTTGTGAGAA 57.515 33.333 0.00 0.00 32.66 2.87
4087 6929 8.644216 TGTATTACTTTGTAAGGTCTTGTGAGA 58.356 33.333 0.00 0.00 0.00 3.27
4088 6930 8.827177 TGTATTACTTTGTAAGGTCTTGTGAG 57.173 34.615 0.00 0.00 0.00 3.51
4089 6931 9.048446 GTTGTATTACTTTGTAAGGTCTTGTGA 57.952 33.333 0.00 0.00 0.00 3.58
4090 6932 8.832521 TGTTGTATTACTTTGTAAGGTCTTGTG 58.167 33.333 0.00 0.00 0.00 3.33
4091 6933 8.967664 TGTTGTATTACTTTGTAAGGTCTTGT 57.032 30.769 0.00 0.00 0.00 3.16
4105 6947 9.095065 CGGCTTTAGTCTTATTGTTGTATTACT 57.905 33.333 0.00 0.00 0.00 2.24
4106 6948 7.849515 GCGGCTTTAGTCTTATTGTTGTATTAC 59.150 37.037 0.00 0.00 0.00 1.89
4107 6949 7.011669 GGCGGCTTTAGTCTTATTGTTGTATTA 59.988 37.037 0.00 0.00 0.00 0.98
4108 6950 6.183360 GGCGGCTTTAGTCTTATTGTTGTATT 60.183 38.462 0.00 0.00 0.00 1.89
4109 6951 5.296035 GGCGGCTTTAGTCTTATTGTTGTAT 59.704 40.000 0.00 0.00 0.00 2.29
4110 6952 4.632688 GGCGGCTTTAGTCTTATTGTTGTA 59.367 41.667 0.00 0.00 0.00 2.41
4111 6953 3.439129 GGCGGCTTTAGTCTTATTGTTGT 59.561 43.478 0.00 0.00 0.00 3.32
4112 6954 3.485216 CGGCGGCTTTAGTCTTATTGTTG 60.485 47.826 7.61 0.00 0.00 3.33
4113 6955 2.676342 CGGCGGCTTTAGTCTTATTGTT 59.324 45.455 7.61 0.00 0.00 2.83
4114 6956 2.277084 CGGCGGCTTTAGTCTTATTGT 58.723 47.619 7.61 0.00 0.00 2.71
4115 6957 2.277084 ACGGCGGCTTTAGTCTTATTG 58.723 47.619 13.24 0.00 0.00 1.90
4116 6958 2.167900 AGACGGCGGCTTTAGTCTTATT 59.832 45.455 10.88 0.00 40.64 1.40
4117 6959 1.755380 AGACGGCGGCTTTAGTCTTAT 59.245 47.619 10.88 0.00 40.64 1.73
4118 6960 1.180029 AGACGGCGGCTTTAGTCTTA 58.820 50.000 10.88 0.00 40.64 2.10
4119 6961 1.180029 TAGACGGCGGCTTTAGTCTT 58.820 50.000 25.39 0.00 42.99 3.01
4120 6962 1.134560 CTTAGACGGCGGCTTTAGTCT 59.865 52.381 25.39 18.41 44.90 3.24
4121 6963 1.557651 CTTAGACGGCGGCTTTAGTC 58.442 55.000 25.39 0.85 0.00 2.59
4122 6964 0.459759 GCTTAGACGGCGGCTTTAGT 60.460 55.000 25.39 0.00 0.00 2.24
4123 6965 0.459585 TGCTTAGACGGCGGCTTTAG 60.460 55.000 25.39 20.26 0.00 1.85
4124 6966 0.037139 TTGCTTAGACGGCGGCTTTA 60.037 50.000 25.39 9.12 0.00 1.85
4125 6967 1.302192 TTGCTTAGACGGCGGCTTT 60.302 52.632 25.39 0.00 0.00 3.51
4126 6968 2.033194 GTTGCTTAGACGGCGGCTT 61.033 57.895 25.39 5.00 0.00 4.35
4127 6969 2.434359 GTTGCTTAGACGGCGGCT 60.434 61.111 23.30 23.30 0.00 5.52
4128 6970 2.434359 AGTTGCTTAGACGGCGGC 60.434 61.111 13.24 8.92 0.00 6.53
4129 6971 0.454600 TAGAGTTGCTTAGACGGCGG 59.545 55.000 13.24 0.00 0.00 6.13
4130 6972 2.386249 GATAGAGTTGCTTAGACGGCG 58.614 52.381 4.80 4.80 0.00 6.46
4131 6973 2.100916 TGGATAGAGTTGCTTAGACGGC 59.899 50.000 0.00 0.00 0.00 5.68
4132 6974 3.381908 ACTGGATAGAGTTGCTTAGACGG 59.618 47.826 0.00 0.00 0.00 4.79
4133 6975 4.640789 ACTGGATAGAGTTGCTTAGACG 57.359 45.455 0.00 0.00 0.00 4.18
4142 6984 4.164988 CCCCTTCATCAACTGGATAGAGTT 59.835 45.833 0.00 0.00 36.58 3.01
4143 6985 3.713764 CCCCTTCATCAACTGGATAGAGT 59.286 47.826 0.00 0.00 33.95 3.24
4144 6986 3.495806 GCCCCTTCATCAACTGGATAGAG 60.496 52.174 0.00 0.00 33.95 2.43
4145 6987 2.439507 GCCCCTTCATCAACTGGATAGA 59.560 50.000 0.00 0.00 33.95 1.98
4146 6988 2.808202 CGCCCCTTCATCAACTGGATAG 60.808 54.545 0.00 0.00 33.95 2.08
4147 6989 1.140852 CGCCCCTTCATCAACTGGATA 59.859 52.381 0.00 0.00 33.95 2.59
4148 6990 0.107017 CGCCCCTTCATCAACTGGAT 60.107 55.000 0.00 0.00 36.39 3.41
4149 6991 1.299648 CGCCCCTTCATCAACTGGA 59.700 57.895 0.00 0.00 0.00 3.86
4150 6992 2.409870 GCGCCCCTTCATCAACTGG 61.410 63.158 0.00 0.00 0.00 4.00
4151 6993 1.651240 CTGCGCCCCTTCATCAACTG 61.651 60.000 4.18 0.00 0.00 3.16
4152 6994 1.377725 CTGCGCCCCTTCATCAACT 60.378 57.895 4.18 0.00 0.00 3.16
4153 6995 0.749454 ATCTGCGCCCCTTCATCAAC 60.749 55.000 4.18 0.00 0.00 3.18
4154 6996 0.836606 TATCTGCGCCCCTTCATCAA 59.163 50.000 4.18 0.00 0.00 2.57
4155 6997 0.394192 CTATCTGCGCCCCTTCATCA 59.606 55.000 4.18 0.00 0.00 3.07
4156 6998 0.952984 GCTATCTGCGCCCCTTCATC 60.953 60.000 4.18 0.00 0.00 2.92
4157 6999 1.072159 GCTATCTGCGCCCCTTCAT 59.928 57.895 4.18 0.00 0.00 2.57
4158 7000 2.505982 GCTATCTGCGCCCCTTCA 59.494 61.111 4.18 0.00 0.00 3.02
4159 7001 2.281139 GGCTATCTGCGCCCCTTC 60.281 66.667 4.18 0.00 44.05 3.46
4166 7008 1.758440 TTAGGCCCAGGCTATCTGCG 61.758 60.000 8.89 0.00 40.30 5.18
4167 7009 0.695347 ATTAGGCCCAGGCTATCTGC 59.305 55.000 8.89 0.00 40.30 4.26
4168 7010 2.237392 GGTATTAGGCCCAGGCTATCTG 59.763 54.545 8.89 0.00 40.30 2.90
4169 7011 2.158004 TGGTATTAGGCCCAGGCTATCT 60.158 50.000 8.89 0.00 40.30 1.98
4170 7012 2.266279 TGGTATTAGGCCCAGGCTATC 58.734 52.381 8.89 0.00 40.30 2.08
4171 7013 2.433444 TGGTATTAGGCCCAGGCTAT 57.567 50.000 8.89 0.32 40.30 2.97
4172 7014 2.173996 GTTTGGTATTAGGCCCAGGCTA 59.826 50.000 8.89 0.00 39.70 3.93
4173 7015 1.063942 GTTTGGTATTAGGCCCAGGCT 60.064 52.381 8.89 0.35 42.39 4.58
4174 7016 1.341581 TGTTTGGTATTAGGCCCAGGC 60.342 52.381 0.00 0.00 41.06 4.85
4175 7017 2.241176 TCTGTTTGGTATTAGGCCCAGG 59.759 50.000 0.00 0.00 31.04 4.45
4176 7018 3.279434 GTCTGTTTGGTATTAGGCCCAG 58.721 50.000 0.00 0.00 31.04 4.45
4177 7019 2.645297 TGTCTGTTTGGTATTAGGCCCA 59.355 45.455 0.00 0.00 0.00 5.36
4178 7020 3.359695 TGTCTGTTTGGTATTAGGCCC 57.640 47.619 0.00 0.00 0.00 5.80
4179 7021 3.560068 CGATGTCTGTTTGGTATTAGGCC 59.440 47.826 0.00 0.00 0.00 5.19
4180 7022 3.002348 GCGATGTCTGTTTGGTATTAGGC 59.998 47.826 0.00 0.00 0.00 3.93
4181 7023 4.188462 TGCGATGTCTGTTTGGTATTAGG 58.812 43.478 0.00 0.00 0.00 2.69
4182 7024 5.351465 AGTTGCGATGTCTGTTTGGTATTAG 59.649 40.000 0.00 0.00 0.00 1.73
4183 7025 5.242434 AGTTGCGATGTCTGTTTGGTATTA 58.758 37.500 0.00 0.00 0.00 0.98
4184 7026 4.072131 AGTTGCGATGTCTGTTTGGTATT 58.928 39.130 0.00 0.00 0.00 1.89
4185 7027 3.674997 AGTTGCGATGTCTGTTTGGTAT 58.325 40.909 0.00 0.00 0.00 2.73
4186 7028 3.120321 AGTTGCGATGTCTGTTTGGTA 57.880 42.857 0.00 0.00 0.00 3.25
4187 7029 1.967319 AGTTGCGATGTCTGTTTGGT 58.033 45.000 0.00 0.00 0.00 3.67
4188 7030 4.219033 GTTTAGTTGCGATGTCTGTTTGG 58.781 43.478 0.00 0.00 0.00 3.28
4189 7031 4.024048 AGGTTTAGTTGCGATGTCTGTTTG 60.024 41.667 0.00 0.00 0.00 2.93
4190 7032 4.134563 AGGTTTAGTTGCGATGTCTGTTT 58.865 39.130 0.00 0.00 0.00 2.83
4191 7033 3.740115 AGGTTTAGTTGCGATGTCTGTT 58.260 40.909 0.00 0.00 0.00 3.16
4192 7034 3.402628 AGGTTTAGTTGCGATGTCTGT 57.597 42.857 0.00 0.00 0.00 3.41
4193 7035 4.688879 TGTTAGGTTTAGTTGCGATGTCTG 59.311 41.667 0.00 0.00 0.00 3.51
4194 7036 4.890088 TGTTAGGTTTAGTTGCGATGTCT 58.110 39.130 0.00 0.00 0.00 3.41
4195 7037 5.581085 AGATGTTAGGTTTAGTTGCGATGTC 59.419 40.000 0.00 0.00 0.00 3.06
4196 7038 5.488341 AGATGTTAGGTTTAGTTGCGATGT 58.512 37.500 0.00 0.00 0.00 3.06
4197 7039 7.491372 TCTTAGATGTTAGGTTTAGTTGCGATG 59.509 37.037 0.00 0.00 0.00 3.84
4198 7040 7.491696 GTCTTAGATGTTAGGTTTAGTTGCGAT 59.508 37.037 0.00 0.00 0.00 4.58
4199 7041 6.810182 GTCTTAGATGTTAGGTTTAGTTGCGA 59.190 38.462 0.00 0.00 0.00 5.10
4200 7042 6.035758 GGTCTTAGATGTTAGGTTTAGTTGCG 59.964 42.308 0.00 0.00 0.00 4.85
4201 7043 7.104290 AGGTCTTAGATGTTAGGTTTAGTTGC 58.896 38.462 0.00 0.00 0.00 4.17
4207 7049 8.265764 GGACATTAGGTCTTAGATGTTAGGTTT 58.734 37.037 0.00 0.00 46.16 3.27
4208 7050 7.147532 GGGACATTAGGTCTTAGATGTTAGGTT 60.148 40.741 0.00 0.00 46.16 3.50
4209 7051 6.326843 GGGACATTAGGTCTTAGATGTTAGGT 59.673 42.308 0.00 0.00 46.16 3.08
4210 7052 6.326583 TGGGACATTAGGTCTTAGATGTTAGG 59.673 42.308 0.00 0.00 46.16 2.69
4211 7053 7.361457 TGGGACATTAGGTCTTAGATGTTAG 57.639 40.000 0.00 0.00 46.16 2.34
4231 7073 1.223487 GCAGGCGTCCTAAATGGGA 59.777 57.895 0.00 0.00 36.20 4.37
4232 7074 1.823899 GGCAGGCGTCCTAAATGGG 60.824 63.158 0.00 0.00 36.20 4.00
4233 7075 2.180204 CGGCAGGCGTCCTAAATGG 61.180 63.158 8.53 0.00 29.64 3.16
4234 7076 1.153449 TCGGCAGGCGTCCTAAATG 60.153 57.895 17.01 0.00 29.64 2.32
4235 7077 1.144057 CTCGGCAGGCGTCCTAAAT 59.856 57.895 17.01 0.00 29.64 1.40
4236 7078 2.577059 CTCGGCAGGCGTCCTAAA 59.423 61.111 17.01 0.00 29.64 1.85
4237 7079 4.143333 GCTCGGCAGGCGTCCTAA 62.143 66.667 17.01 0.00 29.64 2.69
4245 7087 3.746949 GAGACCCATGCTCGGCAGG 62.747 68.421 4.90 4.41 43.65 4.85
4246 7088 2.202987 GAGACCCATGCTCGGCAG 60.203 66.667 4.90 0.00 43.65 4.85
4247 7089 3.002583 TGAGACCCATGCTCGGCA 61.003 61.111 1.01 1.01 44.86 5.69
4248 7090 2.512515 GTGAGACCCATGCTCGGC 60.513 66.667 0.00 0.00 35.15 5.54
4249 7091 2.187946 GGTGAGACCCATGCTCGG 59.812 66.667 0.00 0.00 35.15 4.63
4250 7092 2.202797 CGGTGAGACCCATGCTCG 60.203 66.667 0.00 0.00 33.75 5.03
4251 7093 2.187946 CCGGTGAGACCCATGCTC 59.812 66.667 0.00 0.00 33.75 4.26
4252 7094 2.607750 ACCGGTGAGACCCATGCT 60.608 61.111 6.12 0.00 33.75 3.79
4253 7095 2.125106 GACCGGTGAGACCCATGC 60.125 66.667 14.63 0.00 33.75 4.06
4254 7096 2.584608 GGACCGGTGAGACCCATG 59.415 66.667 14.63 0.00 33.75 3.66
4255 7097 3.075005 CGGACCGGTGAGACCCAT 61.075 66.667 14.63 0.00 33.75 4.00
4268 7110 4.357947 TCTGAGTGCACGCCGGAC 62.358 66.667 18.33 0.00 35.88 4.79
4269 7111 4.056125 CTCTGAGTGCACGCCGGA 62.056 66.667 18.33 18.37 0.00 5.14
4273 7115 4.687215 TGGCCTCTGAGTGCACGC 62.687 66.667 14.25 14.25 0.00 5.34
4274 7116 2.740055 GTGGCCTCTGAGTGCACG 60.740 66.667 12.01 0.00 0.00 5.34
4275 7117 2.359230 GGTGGCCTCTGAGTGCAC 60.359 66.667 9.40 9.40 0.00 4.57
4276 7118 4.007644 CGGTGGCCTCTGAGTGCA 62.008 66.667 7.96 0.00 0.00 4.57
4297 7139 3.925630 ATGGAGCGGTGGCAGTTGG 62.926 63.158 0.00 0.00 43.41 3.77
4298 7140 2.360350 ATGGAGCGGTGGCAGTTG 60.360 61.111 0.00 0.00 43.41 3.16
4299 7141 2.045926 GATGGAGCGGTGGCAGTT 60.046 61.111 0.00 0.00 43.41 3.16
4300 7142 2.527951 GAAGATGGAGCGGTGGCAGT 62.528 60.000 0.00 0.00 43.41 4.40
4301 7143 1.817099 GAAGATGGAGCGGTGGCAG 60.817 63.158 0.00 0.00 43.41 4.85
4302 7144 2.268920 GAAGATGGAGCGGTGGCA 59.731 61.111 0.00 0.00 43.41 4.92
4303 7145 1.817099 CTGAAGATGGAGCGGTGGC 60.817 63.158 0.00 0.00 40.37 5.01
4304 7146 0.250234 TTCTGAAGATGGAGCGGTGG 59.750 55.000 0.00 0.00 0.00 4.61
4305 7147 1.066573 AGTTCTGAAGATGGAGCGGTG 60.067 52.381 0.00 0.00 0.00 4.94
4306 7148 1.066573 CAGTTCTGAAGATGGAGCGGT 60.067 52.381 0.00 0.00 0.00 5.68
4307 7149 1.066573 ACAGTTCTGAAGATGGAGCGG 60.067 52.381 6.83 0.00 0.00 5.52
4308 7150 2.376808 ACAGTTCTGAAGATGGAGCG 57.623 50.000 6.83 0.00 0.00 5.03
4309 7151 4.081972 TCAGTACAGTTCTGAAGATGGAGC 60.082 45.833 7.40 0.00 38.71 4.70
4310 7152 5.651387 TCAGTACAGTTCTGAAGATGGAG 57.349 43.478 7.40 0.00 38.71 3.86
4311 7153 5.625426 GCATCAGTACAGTTCTGAAGATGGA 60.625 44.000 13.36 0.97 43.65 3.41
4312 7154 4.569966 GCATCAGTACAGTTCTGAAGATGG 59.430 45.833 13.36 3.74 43.65 3.51
4313 7155 5.173664 TGCATCAGTACAGTTCTGAAGATG 58.826 41.667 13.36 8.91 43.65 2.90
4314 7156 5.411831 TGCATCAGTACAGTTCTGAAGAT 57.588 39.130 13.36 0.00 43.65 2.40
4315 7157 4.871933 TGCATCAGTACAGTTCTGAAGA 57.128 40.909 13.36 0.00 43.65 2.87
4316 7158 5.173664 TGATGCATCAGTACAGTTCTGAAG 58.826 41.667 25.42 10.42 43.65 3.02
4317 7159 5.151297 TGATGCATCAGTACAGTTCTGAA 57.849 39.130 25.42 0.00 43.65 3.02
4318 7160 4.806640 TGATGCATCAGTACAGTTCTGA 57.193 40.909 25.42 11.91 44.37 3.27
4319 7161 4.093998 GGTTGATGCATCAGTACAGTTCTG 59.906 45.833 27.25 0.70 38.19 3.02
4320 7162 4.019860 AGGTTGATGCATCAGTACAGTTCT 60.020 41.667 27.25 13.87 38.19 3.01
4321 7163 4.256920 AGGTTGATGCATCAGTACAGTTC 58.743 43.478 27.25 12.07 38.19 3.01
4322 7164 4.292186 AGGTTGATGCATCAGTACAGTT 57.708 40.909 27.25 11.67 38.19 3.16
4323 7165 3.988976 AGGTTGATGCATCAGTACAGT 57.011 42.857 27.25 13.13 38.19 3.55
4324 7166 3.181503 GCAAGGTTGATGCATCAGTACAG 60.182 47.826 27.25 19.16 43.29 2.74
4325 7167 2.749076 GCAAGGTTGATGCATCAGTACA 59.251 45.455 27.25 11.89 43.29 2.90
4326 7168 3.012518 AGCAAGGTTGATGCATCAGTAC 58.987 45.455 27.25 22.85 46.22 2.73
4327 7169 3.273434 GAGCAAGGTTGATGCATCAGTA 58.727 45.455 27.25 13.01 46.22 2.74
4328 7170 2.089980 GAGCAAGGTTGATGCATCAGT 58.910 47.619 27.25 14.71 46.22 3.41
4329 7171 1.063616 CGAGCAAGGTTGATGCATCAG 59.936 52.381 27.25 17.31 46.22 2.90
4330 7172 1.089112 CGAGCAAGGTTGATGCATCA 58.911 50.000 25.42 25.42 46.22 3.07
4331 7173 0.379669 CCGAGCAAGGTTGATGCATC 59.620 55.000 20.14 20.14 46.22 3.91
4332 7174 0.322816 ACCGAGCAAGGTTGATGCAT 60.323 50.000 0.00 0.00 46.22 3.96
4333 7175 0.955428 GACCGAGCAAGGTTGATGCA 60.955 55.000 4.58 0.00 46.09 3.96
4334 7176 1.648467 GGACCGAGCAAGGTTGATGC 61.648 60.000 4.58 0.00 46.09 3.91
4335 7177 0.321564 TGGACCGAGCAAGGTTGATG 60.322 55.000 4.58 0.00 46.09 3.07
4336 7178 0.036010 CTGGACCGAGCAAGGTTGAT 60.036 55.000 4.58 0.00 46.09 2.57
4337 7179 1.371183 CTGGACCGAGCAAGGTTGA 59.629 57.895 4.58 0.00 46.09 3.18
4338 7180 2.328099 GCTGGACCGAGCAAGGTTG 61.328 63.158 4.58 0.97 46.09 3.77
4339 7181 1.192146 TAGCTGGACCGAGCAAGGTT 61.192 55.000 15.46 1.08 46.09 3.50
4341 7183 0.249657 GATAGCTGGACCGAGCAAGG 60.250 60.000 15.46 0.00 41.83 3.61
4342 7184 0.461548 TGATAGCTGGACCGAGCAAG 59.538 55.000 15.46 0.00 41.83 4.01
4343 7185 1.069204 GATGATAGCTGGACCGAGCAA 59.931 52.381 15.46 2.51 41.83 3.91
4344 7186 0.676184 GATGATAGCTGGACCGAGCA 59.324 55.000 15.46 5.19 41.83 4.26
4345 7187 0.387878 CGATGATAGCTGGACCGAGC 60.388 60.000 0.00 7.59 39.46 5.03
4346 7188 1.239347 TCGATGATAGCTGGACCGAG 58.761 55.000 0.00 0.00 0.00 4.63
4347 7189 1.541588 CATCGATGATAGCTGGACCGA 59.458 52.381 21.02 0.00 0.00 4.69
4348 7190 1.988063 CATCGATGATAGCTGGACCG 58.012 55.000 21.02 0.00 0.00 4.79
4349 7191 1.674221 GGCATCGATGATAGCTGGACC 60.674 57.143 29.20 12.83 0.00 4.46
4350 7192 1.001293 TGGCATCGATGATAGCTGGAC 59.999 52.381 29.20 7.42 0.00 4.02
4351 7193 1.001293 GTGGCATCGATGATAGCTGGA 59.999 52.381 29.20 0.00 0.00 3.86
4352 7194 1.436600 GTGGCATCGATGATAGCTGG 58.563 55.000 29.20 0.00 0.00 4.85
4353 7195 1.270465 TGGTGGCATCGATGATAGCTG 60.270 52.381 29.20 2.16 0.00 4.24
4354 7196 1.051008 TGGTGGCATCGATGATAGCT 58.949 50.000 29.20 0.00 0.00 3.32
4355 7197 1.151668 GTGGTGGCATCGATGATAGC 58.848 55.000 29.20 22.94 0.00 2.97
4356 7198 1.422388 CGTGGTGGCATCGATGATAG 58.578 55.000 29.20 2.51 0.00 2.08
4357 7199 0.033366 CCGTGGTGGCATCGATGATA 59.967 55.000 29.20 13.38 0.00 2.15
4358 7200 1.227645 CCGTGGTGGCATCGATGAT 60.228 57.895 29.20 0.00 0.00 2.45
4359 7201 2.186644 CCGTGGTGGCATCGATGA 59.813 61.111 29.20 6.11 0.00 2.92
4379 7221 4.410400 GGAGGAGGTGCCGTTGGG 62.410 72.222 0.00 0.00 43.43 4.12
4380 7222 4.410400 GGGAGGAGGTGCCGTTGG 62.410 72.222 0.00 0.00 43.43 3.77
4381 7223 3.322466 AGGGAGGAGGTGCCGTTG 61.322 66.667 0.00 0.00 43.04 4.10
4382 7224 3.322466 CAGGGAGGAGGTGCCGTT 61.322 66.667 0.00 0.00 43.04 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.