Multiple sequence alignment - TraesCS6B01G140400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G140400 chr6B 100.000 2770 0 0 1 2770 139443367 139446136 0.000000e+00 5116
1 TraesCS6B01G140400 chrUn 96.924 2406 57 4 1 2405 75466636 75469025 0.000000e+00 4017
2 TraesCS6B01G140400 chr3D 96.675 2406 65 3 1 2405 166288711 166291102 0.000000e+00 3986
3 TraesCS6B01G140400 chr7A 96.219 2407 76 3 1 2406 450569397 450567005 0.000000e+00 3927
4 TraesCS6B01G140400 chr2D 95.988 2368 70 13 1 2367 121214547 121212204 0.000000e+00 3823
5 TraesCS6B01G140400 chr6D 96.403 1946 47 12 471 2408 59413293 59411363 0.000000e+00 3184
6 TraesCS6B01G140400 chr7B 94.366 1917 66 7 1 1913 515048453 515050331 0.000000e+00 2904
7 TraesCS6B01G140400 chr7B 94.262 1917 68 7 1 1913 515068420 515070298 0.000000e+00 2892
8 TraesCS6B01G140400 chr3B 95.552 1821 46 4 1 1819 62880928 62879141 0.000000e+00 2881
9 TraesCS6B01G140400 chr3B 93.245 1214 68 9 706 1913 15665473 15664268 0.000000e+00 1775
10 TraesCS6B01G140400 chr3B 94.661 487 15 4 1921 2407 62878224 62877749 0.000000e+00 745
11 TraesCS6B01G140400 chr3B 94.070 489 17 5 1921 2408 15741813 15741336 0.000000e+00 732
12 TraesCS6B01G140400 chr3B 92.886 492 25 3 1921 2411 15664307 15663825 0.000000e+00 706
13 TraesCS6B01G140400 chr5A 98.445 1286 19 1 1 1285 672817205 672815920 0.000000e+00 2263
14 TraesCS6B01G140400 chr5A 96.296 1134 28 5 1280 2411 672814169 672813048 0.000000e+00 1849
15 TraesCS6B01G140400 chr1A 95.385 1170 39 4 1236 2404 42898329 42899484 0.000000e+00 1847
16 TraesCS6B01G140400 chr1B 96.788 716 22 1 1 716 604789658 604790372 0.000000e+00 1194
17 TraesCS6B01G140400 chr1B 91.597 476 18 2 1921 2396 604791487 604791940 3.010000e-179 638
18 TraesCS6B01G140400 chr1B 79.565 230 39 8 2547 2770 3970347 3970574 1.030000e-34 158
19 TraesCS6B01G140400 chr2B 83.898 354 50 6 2419 2770 103843929 103844277 5.720000e-87 331


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G140400 chr6B 139443367 139446136 2769 False 5116.0 5116 100.0000 1 2770 1 chr6B.!!$F1 2769
1 TraesCS6B01G140400 chrUn 75466636 75469025 2389 False 4017.0 4017 96.9240 1 2405 1 chrUn.!!$F1 2404
2 TraesCS6B01G140400 chr3D 166288711 166291102 2391 False 3986.0 3986 96.6750 1 2405 1 chr3D.!!$F1 2404
3 TraesCS6B01G140400 chr7A 450567005 450569397 2392 True 3927.0 3927 96.2190 1 2406 1 chr7A.!!$R1 2405
4 TraesCS6B01G140400 chr2D 121212204 121214547 2343 True 3823.0 3823 95.9880 1 2367 1 chr2D.!!$R1 2366
5 TraesCS6B01G140400 chr6D 59411363 59413293 1930 True 3184.0 3184 96.4030 471 2408 1 chr6D.!!$R1 1937
6 TraesCS6B01G140400 chr7B 515048453 515050331 1878 False 2904.0 2904 94.3660 1 1913 1 chr7B.!!$F1 1912
7 TraesCS6B01G140400 chr7B 515068420 515070298 1878 False 2892.0 2892 94.2620 1 1913 1 chr7B.!!$F2 1912
8 TraesCS6B01G140400 chr3B 62877749 62880928 3179 True 1813.0 2881 95.1065 1 2407 2 chr3B.!!$R3 2406
9 TraesCS6B01G140400 chr3B 15663825 15665473 1648 True 1240.5 1775 93.0655 706 2411 2 chr3B.!!$R2 1705
10 TraesCS6B01G140400 chr5A 672813048 672817205 4157 True 2056.0 2263 97.3705 1 2411 2 chr5A.!!$R1 2410
11 TraesCS6B01G140400 chr1A 42898329 42899484 1155 False 1847.0 1847 95.3850 1236 2404 1 chr1A.!!$F1 1168
12 TraesCS6B01G140400 chr1B 604789658 604791940 2282 False 916.0 1194 94.1925 1 2396 2 chr1B.!!$F2 2395

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
684 688 0.830648 TAGTGGATGTGCCTAGGTGC 59.169 55.0 11.31 4.18 37.63 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2634 5332 0.031314 CGATCATGTCCCTCTGGTCG 59.969 60.0 0.0 0.0 39.36 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 106 7.289549 ACCATAGGAAAATACTACCTAGTGGAC 59.710 40.741 18.25 0.00 39.23 4.02
192 193 2.614057 GTGGGTCTCAAGTCAACAACAG 59.386 50.000 0.00 0.00 0.00 3.16
254 255 3.686016 GGGCTAGAAATGTTGTGGAGAA 58.314 45.455 0.00 0.00 0.00 2.87
354 355 7.615365 ACAAGTGTCCATATGGTGTTGAATAAT 59.385 33.333 21.28 0.00 36.34 1.28
684 688 0.830648 TAGTGGATGTGCCTAGGTGC 59.169 55.000 11.31 4.18 37.63 5.01
890 928 4.430137 TTTGCACTCTCATTCAGCATTC 57.570 40.909 0.00 0.00 34.87 2.67
1143 1184 4.442706 AGGATATCGCGAAGAACAACATT 58.557 39.130 15.24 0.00 0.00 2.71
1358 3158 5.240891 CAGCAACTTTACTTCTCTGATGGA 58.759 41.667 0.00 0.00 0.00 3.41
1507 3319 0.458889 GCTGAGACTGCTGCTGAGAG 60.459 60.000 13.69 0.00 0.00 3.20
1513 3325 1.004799 CTGCTGCTGAGAGTGCTGT 60.005 57.895 0.00 0.00 0.00 4.40
1767 3579 6.012658 TGATTCTTAATGAGCGCTTGTTTT 57.987 33.333 13.26 5.84 0.00 2.43
2079 4777 4.185394 TGTGTTGTACTGTGTTGGTGTAG 58.815 43.478 0.00 0.00 0.00 2.74
2408 5106 2.151202 ACATCCAAACACAGCGTTAGG 58.849 47.619 0.00 0.00 36.59 2.69
2409 5107 2.224426 ACATCCAAACACAGCGTTAGGA 60.224 45.455 0.00 0.00 36.59 2.94
2412 5110 2.875933 TCCAAACACAGCGTTAGGAAAG 59.124 45.455 0.00 0.00 36.59 2.62
2413 5111 2.875933 CCAAACACAGCGTTAGGAAAGA 59.124 45.455 0.00 0.00 36.59 2.52
2414 5112 3.314080 CCAAACACAGCGTTAGGAAAGAA 59.686 43.478 0.00 0.00 36.59 2.52
2415 5113 4.279659 CAAACACAGCGTTAGGAAAGAAC 58.720 43.478 0.00 0.00 36.59 3.01
2431 5129 7.379098 GGAAAGAACGATCATTCCTAAAAGT 57.621 36.000 18.98 0.00 45.66 2.66
2432 5130 8.488651 GGAAAGAACGATCATTCCTAAAAGTA 57.511 34.615 18.98 0.00 45.66 2.24
2433 5131 8.604890 GGAAAGAACGATCATTCCTAAAAGTAG 58.395 37.037 18.98 0.00 45.66 2.57
2435 5133 6.583562 AGAACGATCATTCCTAAAAGTAGGG 58.416 40.000 0.00 0.00 46.34 3.53
2436 5134 6.383147 AGAACGATCATTCCTAAAAGTAGGGA 59.617 38.462 0.00 0.00 46.34 4.20
2437 5135 5.915175 ACGATCATTCCTAAAAGTAGGGAC 58.085 41.667 0.00 0.00 46.34 4.46
2438 5136 4.982916 CGATCATTCCTAAAAGTAGGGACG 59.017 45.833 0.04 0.00 46.34 4.79
2439 5137 5.451520 CGATCATTCCTAAAAGTAGGGACGT 60.452 44.000 0.00 0.00 46.34 4.34
2440 5138 6.238842 CGATCATTCCTAAAAGTAGGGACGTA 60.239 42.308 0.00 0.00 46.34 3.57
2441 5139 6.855763 TCATTCCTAAAAGTAGGGACGTAA 57.144 37.500 0.00 0.00 46.34 3.18
2442 5140 6.633856 TCATTCCTAAAAGTAGGGACGTAAC 58.366 40.000 0.00 0.00 46.34 2.50
2443 5141 4.701956 TCCTAAAAGTAGGGACGTAACG 57.298 45.455 0.00 0.00 46.34 3.18
2444 5142 3.443681 TCCTAAAAGTAGGGACGTAACGG 59.556 47.826 0.00 0.00 46.34 4.44
2445 5143 3.193479 CCTAAAAGTAGGGACGTAACGGT 59.807 47.826 0.00 0.00 43.07 4.83
2446 5144 2.730550 AAAGTAGGGACGTAACGGTG 57.269 50.000 0.00 0.00 0.00 4.94
2447 5145 1.620822 AAGTAGGGACGTAACGGTGT 58.379 50.000 0.00 0.00 0.00 4.16
2448 5146 1.620822 AGTAGGGACGTAACGGTGTT 58.379 50.000 0.00 0.00 0.00 3.32
2449 5147 1.270550 AGTAGGGACGTAACGGTGTTG 59.729 52.381 0.00 0.00 0.00 3.33
2450 5148 0.038343 TAGGGACGTAACGGTGTTGC 60.038 55.000 0.00 0.00 0.00 4.17
2451 5149 2.319841 GGGACGTAACGGTGTTGCC 61.320 63.158 0.00 0.00 0.00 4.52
2452 5150 1.301165 GGACGTAACGGTGTTGCCT 60.301 57.895 0.00 0.00 34.25 4.75
2453 5151 0.881600 GGACGTAACGGTGTTGCCTT 60.882 55.000 0.00 0.00 34.25 4.35
2454 5152 0.939419 GACGTAACGGTGTTGCCTTT 59.061 50.000 0.00 0.00 34.25 3.11
2455 5153 1.331447 GACGTAACGGTGTTGCCTTTT 59.669 47.619 0.00 0.00 34.25 2.27
2456 5154 1.331447 ACGTAACGGTGTTGCCTTTTC 59.669 47.619 0.00 0.00 34.25 2.29
2457 5155 1.334329 CGTAACGGTGTTGCCTTTTCC 60.334 52.381 0.00 0.00 34.25 3.13
2458 5156 1.677052 GTAACGGTGTTGCCTTTTCCA 59.323 47.619 0.00 0.00 34.25 3.53
2459 5157 1.187087 AACGGTGTTGCCTTTTCCAA 58.813 45.000 0.00 0.00 34.25 3.53
2460 5158 1.187087 ACGGTGTTGCCTTTTCCAAA 58.813 45.000 0.00 0.00 34.25 3.28
2461 5159 1.134936 ACGGTGTTGCCTTTTCCAAAC 60.135 47.619 0.00 0.00 34.25 2.93
2462 5160 1.136110 CGGTGTTGCCTTTTCCAAACT 59.864 47.619 0.00 0.00 34.25 2.66
2463 5161 2.418060 CGGTGTTGCCTTTTCCAAACTT 60.418 45.455 0.00 0.00 34.25 2.66
2464 5162 3.605634 GGTGTTGCCTTTTCCAAACTTT 58.394 40.909 0.00 0.00 0.00 2.66
2465 5163 3.373748 GGTGTTGCCTTTTCCAAACTTTG 59.626 43.478 0.00 0.00 0.00 2.77
2466 5164 4.249661 GTGTTGCCTTTTCCAAACTTTGA 58.750 39.130 2.87 0.00 0.00 2.69
2467 5165 4.092821 GTGTTGCCTTTTCCAAACTTTGAC 59.907 41.667 2.87 0.00 0.00 3.18
2468 5166 3.535280 TGCCTTTTCCAAACTTTGACC 57.465 42.857 2.87 0.00 0.00 4.02
2469 5167 2.159170 TGCCTTTTCCAAACTTTGACCG 60.159 45.455 2.87 0.00 0.00 4.79
2470 5168 2.469826 CCTTTTCCAAACTTTGACCGC 58.530 47.619 2.87 0.00 0.00 5.68
2471 5169 2.469826 CTTTTCCAAACTTTGACCGCC 58.530 47.619 2.87 0.00 0.00 6.13
2472 5170 0.382515 TTTCCAAACTTTGACCGCCG 59.617 50.000 2.87 0.00 0.00 6.46
2473 5171 0.464013 TTCCAAACTTTGACCGCCGA 60.464 50.000 2.87 0.00 0.00 5.54
2474 5172 1.161563 TCCAAACTTTGACCGCCGAC 61.162 55.000 2.87 0.00 0.00 4.79
2475 5173 1.281656 CAAACTTTGACCGCCGACC 59.718 57.895 0.00 0.00 0.00 4.79
2476 5174 2.248835 AAACTTTGACCGCCGACCG 61.249 57.895 0.00 0.00 0.00 4.79
2485 5183 3.047877 CGCCGACCGGAAAGCTTT 61.048 61.111 12.53 12.53 37.50 3.51
2486 5184 2.868196 GCCGACCGGAAAGCTTTC 59.132 61.111 27.68 27.68 37.50 2.62
2487 5185 1.671379 GCCGACCGGAAAGCTTTCT 60.671 57.895 32.28 17.50 37.35 2.52
2488 5186 1.235281 GCCGACCGGAAAGCTTTCTT 61.235 55.000 32.28 19.92 37.35 2.52
2489 5187 1.942586 GCCGACCGGAAAGCTTTCTTA 60.943 52.381 32.28 0.00 37.35 2.10
2490 5188 1.730612 CCGACCGGAAAGCTTTCTTAC 59.269 52.381 32.28 21.09 37.35 2.34
2491 5189 1.389106 CGACCGGAAAGCTTTCTTACG 59.611 52.381 32.28 26.72 37.35 3.18
2492 5190 1.128136 GACCGGAAAGCTTTCTTACGC 59.872 52.381 32.28 17.85 37.35 4.42
2493 5191 0.094730 CCGGAAAGCTTTCTTACGCG 59.905 55.000 32.28 26.12 37.35 6.01
2494 5192 1.065358 CGGAAAGCTTTCTTACGCGA 58.935 50.000 32.28 0.00 37.35 5.87
2495 5193 1.059264 CGGAAAGCTTTCTTACGCGAG 59.941 52.381 32.28 13.75 37.35 5.03
2496 5194 1.393883 GGAAAGCTTTCTTACGCGAGG 59.606 52.381 32.28 1.72 37.35 4.63
2497 5195 0.796927 AAAGCTTTCTTACGCGAGGC 59.203 50.000 15.93 0.82 31.02 4.70
2498 5196 1.019805 AAGCTTTCTTACGCGAGGCC 61.020 55.000 15.93 0.00 0.00 5.19
2499 5197 1.740296 GCTTTCTTACGCGAGGCCA 60.740 57.895 15.93 0.00 0.00 5.36
2500 5198 1.696832 GCTTTCTTACGCGAGGCCAG 61.697 60.000 15.93 0.00 0.00 4.85
2501 5199 1.696832 CTTTCTTACGCGAGGCCAGC 61.697 60.000 15.93 9.68 0.00 4.85
2529 5227 4.824166 CGTCCCGGTCGCTACACG 62.824 72.222 0.00 0.00 45.62 4.49
2539 5237 4.814294 GCTACACGCCCCGTCCAG 62.814 72.222 0.00 0.00 38.32 3.86
2540 5238 4.143333 CTACACGCCCCGTCCAGG 62.143 72.222 0.00 0.00 38.32 4.45
2547 5245 3.465403 CCCCGTCCAGGCAGAGAG 61.465 72.222 0.00 0.00 39.21 3.20
2548 5246 3.465403 CCCGTCCAGGCAGAGAGG 61.465 72.222 0.00 0.00 39.21 3.69
2549 5247 3.465403 CCGTCCAGGCAGAGAGGG 61.465 72.222 0.00 0.00 0.00 4.30
2550 5248 2.681778 CGTCCAGGCAGAGAGGGT 60.682 66.667 0.00 0.00 0.00 4.34
2551 5249 2.985456 GTCCAGGCAGAGAGGGTG 59.015 66.667 0.00 0.00 0.00 4.61
2552 5250 2.284921 TCCAGGCAGAGAGGGTGG 60.285 66.667 0.00 0.00 0.00 4.61
2553 5251 2.608988 CCAGGCAGAGAGGGTGGT 60.609 66.667 0.00 0.00 0.00 4.16
2554 5252 1.306141 CCAGGCAGAGAGGGTGGTA 60.306 63.158 0.00 0.00 0.00 3.25
2555 5253 1.333636 CCAGGCAGAGAGGGTGGTAG 61.334 65.000 0.00 0.00 0.00 3.18
2556 5254 1.002274 AGGCAGAGAGGGTGGTAGG 59.998 63.158 0.00 0.00 0.00 3.18
2557 5255 2.066999 GGCAGAGAGGGTGGTAGGG 61.067 68.421 0.00 0.00 0.00 3.53
2558 5256 1.001760 GCAGAGAGGGTGGTAGGGA 59.998 63.158 0.00 0.00 0.00 4.20
2559 5257 1.045911 GCAGAGAGGGTGGTAGGGAG 61.046 65.000 0.00 0.00 0.00 4.30
2560 5258 0.397816 CAGAGAGGGTGGTAGGGAGG 60.398 65.000 0.00 0.00 0.00 4.30
2561 5259 0.555369 AGAGAGGGTGGTAGGGAGGA 60.555 60.000 0.00 0.00 0.00 3.71
2562 5260 0.338814 GAGAGGGTGGTAGGGAGGAA 59.661 60.000 0.00 0.00 0.00 3.36
2563 5261 0.340208 AGAGGGTGGTAGGGAGGAAG 59.660 60.000 0.00 0.00 0.00 3.46
2564 5262 0.338814 GAGGGTGGTAGGGAGGAAGA 59.661 60.000 0.00 0.00 0.00 2.87
2565 5263 0.340208 AGGGTGGTAGGGAGGAAGAG 59.660 60.000 0.00 0.00 0.00 2.85
2566 5264 0.691413 GGGTGGTAGGGAGGAAGAGG 60.691 65.000 0.00 0.00 0.00 3.69
2567 5265 0.691413 GGTGGTAGGGAGGAAGAGGG 60.691 65.000 0.00 0.00 0.00 4.30
2568 5266 0.691413 GTGGTAGGGAGGAAGAGGGG 60.691 65.000 0.00 0.00 0.00 4.79
2569 5267 1.074395 GGTAGGGAGGAAGAGGGGG 60.074 68.421 0.00 0.00 0.00 5.40
2570 5268 1.710972 GTAGGGAGGAAGAGGGGGT 59.289 63.158 0.00 0.00 0.00 4.95
2571 5269 0.044397 GTAGGGAGGAAGAGGGGGTT 59.956 60.000 0.00 0.00 0.00 4.11
2572 5270 1.293153 GTAGGGAGGAAGAGGGGGTTA 59.707 57.143 0.00 0.00 0.00 2.85
2573 5271 0.343726 AGGGAGGAAGAGGGGGTTAG 59.656 60.000 0.00 0.00 0.00 2.34
2574 5272 0.044397 GGGAGGAAGAGGGGGTTAGT 59.956 60.000 0.00 0.00 0.00 2.24
2575 5273 1.557426 GGGAGGAAGAGGGGGTTAGTT 60.557 57.143 0.00 0.00 0.00 2.24
2576 5274 2.293385 GGGAGGAAGAGGGGGTTAGTTA 60.293 54.545 0.00 0.00 0.00 2.24
2577 5275 3.039743 GGAGGAAGAGGGGGTTAGTTAG 58.960 54.545 0.00 0.00 0.00 2.34
2578 5276 2.435069 GAGGAAGAGGGGGTTAGTTAGC 59.565 54.545 0.00 0.00 0.00 3.09
2579 5277 1.489649 GGAAGAGGGGGTTAGTTAGCC 59.510 57.143 0.00 0.00 44.00 3.93
2580 5278 2.193993 GAAGAGGGGGTTAGTTAGCCA 58.806 52.381 0.00 0.00 46.65 4.75
2581 5279 1.880941 AGAGGGGGTTAGTTAGCCAG 58.119 55.000 0.00 0.00 46.65 4.85
2582 5280 0.837940 GAGGGGGTTAGTTAGCCAGG 59.162 60.000 0.00 0.00 46.65 4.45
2583 5281 1.226542 GGGGGTTAGTTAGCCAGGC 59.773 63.158 1.84 1.84 46.65 4.85
2584 5282 1.568118 GGGGGTTAGTTAGCCAGGCA 61.568 60.000 15.80 0.00 46.65 4.75
2585 5283 0.107165 GGGGTTAGTTAGCCAGGCAG 60.107 60.000 15.80 0.00 46.65 4.85
2586 5284 0.618981 GGGTTAGTTAGCCAGGCAGT 59.381 55.000 15.80 0.00 44.15 4.40
2587 5285 1.004394 GGGTTAGTTAGCCAGGCAGTT 59.996 52.381 15.80 0.00 44.15 3.16
2588 5286 2.554564 GGGTTAGTTAGCCAGGCAGTTT 60.555 50.000 15.80 0.00 44.15 2.66
2589 5287 2.747989 GGTTAGTTAGCCAGGCAGTTTC 59.252 50.000 15.80 0.00 0.00 2.78
2590 5288 3.408634 GTTAGTTAGCCAGGCAGTTTCA 58.591 45.455 15.80 0.00 0.00 2.69
2591 5289 2.656947 AGTTAGCCAGGCAGTTTCAA 57.343 45.000 15.80 0.00 0.00 2.69
2592 5290 2.944129 AGTTAGCCAGGCAGTTTCAAA 58.056 42.857 15.80 0.00 0.00 2.69
2593 5291 2.887152 AGTTAGCCAGGCAGTTTCAAAG 59.113 45.455 15.80 0.00 0.00 2.77
2594 5292 2.884639 GTTAGCCAGGCAGTTTCAAAGA 59.115 45.455 15.80 0.00 0.00 2.52
2595 5293 2.071778 AGCCAGGCAGTTTCAAAGAA 57.928 45.000 15.80 0.00 0.00 2.52
2596 5294 1.959282 AGCCAGGCAGTTTCAAAGAAG 59.041 47.619 15.80 0.00 0.00 2.85
2597 5295 1.956477 GCCAGGCAGTTTCAAAGAAGA 59.044 47.619 6.55 0.00 0.00 2.87
2598 5296 2.362077 GCCAGGCAGTTTCAAAGAAGAA 59.638 45.455 6.55 0.00 0.00 2.52
2599 5297 3.181476 GCCAGGCAGTTTCAAAGAAGAAA 60.181 43.478 6.55 0.00 35.28 2.52
2607 5305 5.385396 GTTTCAAAGAAGAAACGAGTCGA 57.615 39.130 21.50 0.00 45.28 4.20
2608 5306 5.792631 GTTTCAAAGAAGAAACGAGTCGAA 58.207 37.500 21.50 0.00 45.28 3.71
2609 5307 5.637104 TTCAAAGAAGAAACGAGTCGAAG 57.363 39.130 21.50 0.00 0.00 3.79
2610 5308 3.489785 TCAAAGAAGAAACGAGTCGAAGC 59.510 43.478 21.50 7.34 0.00 3.86
2611 5309 1.687628 AGAAGAAACGAGTCGAAGCG 58.312 50.000 21.50 6.63 0.00 4.68
2612 5310 0.708918 GAAGAAACGAGTCGAAGCGG 59.291 55.000 21.50 0.00 0.00 5.52
2613 5311 0.666577 AAGAAACGAGTCGAAGCGGG 60.667 55.000 21.50 0.00 0.00 6.13
2614 5312 1.080974 GAAACGAGTCGAAGCGGGA 60.081 57.895 21.50 0.00 0.00 5.14
2615 5313 0.665369 GAAACGAGTCGAAGCGGGAA 60.665 55.000 21.50 0.00 0.00 3.97
2616 5314 0.037605 AAACGAGTCGAAGCGGGAAT 60.038 50.000 21.50 0.00 0.00 3.01
2617 5315 0.458025 AACGAGTCGAAGCGGGAATC 60.458 55.000 21.50 0.00 0.00 2.52
2618 5316 1.313812 ACGAGTCGAAGCGGGAATCT 61.314 55.000 21.50 0.00 0.00 2.40
2619 5317 0.179134 CGAGTCGAAGCGGGAATCTT 60.179 55.000 6.73 0.00 0.00 2.40
2620 5318 1.281899 GAGTCGAAGCGGGAATCTTG 58.718 55.000 0.00 0.00 0.00 3.02
2621 5319 0.108138 AGTCGAAGCGGGAATCTTGG 60.108 55.000 0.00 0.00 0.00 3.61
2622 5320 0.391263 GTCGAAGCGGGAATCTTGGT 60.391 55.000 0.00 0.00 0.00 3.67
2623 5321 0.108329 TCGAAGCGGGAATCTTGGTC 60.108 55.000 0.00 0.00 0.00 4.02
2624 5322 1.421410 CGAAGCGGGAATCTTGGTCG 61.421 60.000 0.00 0.00 0.00 4.79
2625 5323 0.108329 GAAGCGGGAATCTTGGTCGA 60.108 55.000 0.00 0.00 0.00 4.20
2626 5324 0.108138 AAGCGGGAATCTTGGTCGAG 60.108 55.000 0.00 0.00 0.00 4.04
2627 5325 1.521681 GCGGGAATCTTGGTCGAGG 60.522 63.158 0.00 0.00 0.00 4.63
2628 5326 1.521681 CGGGAATCTTGGTCGAGGC 60.522 63.158 0.00 0.00 0.00 4.70
2629 5327 1.602237 GGGAATCTTGGTCGAGGCA 59.398 57.895 0.00 0.00 0.00 4.75
2630 5328 0.462759 GGGAATCTTGGTCGAGGCAG 60.463 60.000 0.00 0.00 0.00 4.85
2631 5329 0.537188 GGAATCTTGGTCGAGGCAGA 59.463 55.000 0.00 0.00 0.00 4.26
2632 5330 1.066143 GGAATCTTGGTCGAGGCAGAA 60.066 52.381 0.00 0.00 0.00 3.02
2633 5331 2.615493 GGAATCTTGGTCGAGGCAGAAA 60.615 50.000 0.00 0.00 0.00 2.52
2634 5332 2.100605 ATCTTGGTCGAGGCAGAAAC 57.899 50.000 0.00 0.00 0.00 2.78
2635 5333 0.319555 TCTTGGTCGAGGCAGAAACG 60.320 55.000 0.00 0.00 0.00 3.60
2636 5334 0.319555 CTTGGTCGAGGCAGAAACGA 60.320 55.000 0.00 0.00 0.00 3.85
2638 5336 3.857909 GTCGAGGCAGAAACGACC 58.142 61.111 0.00 0.00 46.66 4.79
2639 5337 1.006571 GTCGAGGCAGAAACGACCA 60.007 57.895 0.00 0.00 46.66 4.02
2640 5338 1.009389 GTCGAGGCAGAAACGACCAG 61.009 60.000 0.00 0.00 46.66 4.00
2641 5339 1.176619 TCGAGGCAGAAACGACCAGA 61.177 55.000 0.00 0.00 0.00 3.86
2642 5340 0.734253 CGAGGCAGAAACGACCAGAG 60.734 60.000 0.00 0.00 0.00 3.35
2643 5341 0.390472 GAGGCAGAAACGACCAGAGG 60.390 60.000 0.00 0.00 0.00 3.69
2644 5342 1.376037 GGCAGAAACGACCAGAGGG 60.376 63.158 0.00 0.00 41.29 4.30
2645 5343 1.671742 GCAGAAACGACCAGAGGGA 59.328 57.895 0.00 0.00 38.05 4.20
2646 5344 0.670854 GCAGAAACGACCAGAGGGAC 60.671 60.000 0.00 0.00 38.05 4.46
2647 5345 0.679505 CAGAAACGACCAGAGGGACA 59.320 55.000 0.00 0.00 38.05 4.02
2648 5346 1.276421 CAGAAACGACCAGAGGGACAT 59.724 52.381 0.00 0.00 38.05 3.06
2649 5347 1.276421 AGAAACGACCAGAGGGACATG 59.724 52.381 0.00 0.00 38.05 3.21
2650 5348 1.275291 GAAACGACCAGAGGGACATGA 59.725 52.381 0.00 0.00 38.05 3.07
2651 5349 1.573108 AACGACCAGAGGGACATGAT 58.427 50.000 0.00 0.00 38.05 2.45
2652 5350 1.115467 ACGACCAGAGGGACATGATC 58.885 55.000 0.00 0.00 38.05 2.92
2653 5351 0.031314 CGACCAGAGGGACATGATCG 59.969 60.000 0.00 0.00 38.05 3.69
2654 5352 0.249657 GACCAGAGGGACATGATCGC 60.250 60.000 0.00 1.88 40.60 4.58
2659 5357 2.190313 GGGACATGATCGCTGGCA 59.810 61.111 0.00 0.00 37.30 4.92
2660 5358 1.890979 GGGACATGATCGCTGGCAG 60.891 63.158 10.94 10.94 37.30 4.85
2661 5359 1.153289 GGACATGATCGCTGGCAGT 60.153 57.895 17.16 0.00 0.00 4.40
2662 5360 0.104855 GGACATGATCGCTGGCAGTA 59.895 55.000 17.16 5.20 0.00 2.74
2663 5361 1.212616 GACATGATCGCTGGCAGTAC 58.787 55.000 17.16 5.96 0.00 2.73
2664 5362 0.528466 ACATGATCGCTGGCAGTACG 60.528 55.000 17.16 12.18 0.00 3.67
2665 5363 1.068083 ATGATCGCTGGCAGTACGG 59.932 57.895 17.16 3.62 0.00 4.02
2666 5364 2.279517 GATCGCTGGCAGTACGGG 60.280 66.667 17.16 0.00 0.00 5.28
2667 5365 3.792053 GATCGCTGGCAGTACGGGG 62.792 68.421 17.16 0.00 0.00 5.73
2669 5367 4.814294 CGCTGGCAGTACGGGGAC 62.814 72.222 17.16 0.00 31.87 4.46
2681 5379 4.803426 GGGGACGTGAGCTGAGCG 62.803 72.222 0.00 0.00 0.00 5.03
2682 5380 3.749064 GGGACGTGAGCTGAGCGA 61.749 66.667 0.00 0.00 0.00 4.93
2683 5381 2.202544 GGACGTGAGCTGAGCGAG 60.203 66.667 0.00 0.00 0.00 5.03
2684 5382 2.202544 GACGTGAGCTGAGCGAGG 60.203 66.667 0.00 0.00 0.00 4.63
2685 5383 2.673341 ACGTGAGCTGAGCGAGGA 60.673 61.111 0.00 0.00 0.00 3.71
2686 5384 2.101965 CGTGAGCTGAGCGAGGAG 59.898 66.667 0.00 0.00 0.00 3.69
2687 5385 2.695759 CGTGAGCTGAGCGAGGAGT 61.696 63.158 0.00 0.00 0.00 3.85
2688 5386 1.138671 GTGAGCTGAGCGAGGAGTC 59.861 63.158 0.00 0.00 0.00 3.36
2689 5387 2.049185 TGAGCTGAGCGAGGAGTCC 61.049 63.158 0.00 0.00 0.00 3.85
2690 5388 3.119709 GAGCTGAGCGAGGAGTCCG 62.120 68.421 2.76 0.00 0.00 4.79
2691 5389 4.200283 GCTGAGCGAGGAGTCCGG 62.200 72.222 2.76 0.00 0.00 5.14
2692 5390 3.522731 CTGAGCGAGGAGTCCGGG 61.523 72.222 0.00 0.42 0.00 5.73
2693 5391 3.997400 CTGAGCGAGGAGTCCGGGA 62.997 68.421 0.00 0.00 0.00 5.14
2694 5392 2.754658 GAGCGAGGAGTCCGGGAA 60.755 66.667 0.00 0.00 0.00 3.97
2695 5393 2.756283 AGCGAGGAGTCCGGGAAG 60.756 66.667 0.00 0.00 0.00 3.46
2696 5394 2.754658 GCGAGGAGTCCGGGAAGA 60.755 66.667 0.00 0.00 0.00 2.87
2697 5395 2.776913 GCGAGGAGTCCGGGAAGAG 61.777 68.421 0.00 0.00 0.00 2.85
2698 5396 2.122167 CGAGGAGTCCGGGAAGAGG 61.122 68.421 0.00 0.00 0.00 3.69
2699 5397 1.758906 GAGGAGTCCGGGAAGAGGG 60.759 68.421 0.00 0.00 0.00 4.30
2700 5398 3.471806 GGAGTCCGGGAAGAGGGC 61.472 72.222 0.00 0.00 0.00 5.19
2701 5399 3.839432 GAGTCCGGGAAGAGGGCG 61.839 72.222 0.00 0.00 38.65 6.13
2702 5400 4.698625 AGTCCGGGAAGAGGGCGT 62.699 66.667 0.00 0.00 38.65 5.68
2703 5401 4.452733 GTCCGGGAAGAGGGCGTG 62.453 72.222 0.00 0.00 0.00 5.34
2721 5419 4.413928 CCACCCGGCATCAAAGAA 57.586 55.556 0.00 0.00 0.00 2.52
2722 5420 2.183409 CCACCCGGCATCAAAGAAG 58.817 57.895 0.00 0.00 0.00 2.85
2723 5421 1.315257 CCACCCGGCATCAAAGAAGG 61.315 60.000 0.00 0.00 0.00 3.46
2724 5422 1.678970 ACCCGGCATCAAAGAAGGC 60.679 57.895 0.00 0.00 0.00 4.35
2725 5423 1.379044 CCCGGCATCAAAGAAGGCT 60.379 57.895 0.00 0.00 0.00 4.58
2726 5424 1.379642 CCCGGCATCAAAGAAGGCTC 61.380 60.000 0.00 0.00 0.00 4.70
2727 5425 0.393537 CCGGCATCAAAGAAGGCTCT 60.394 55.000 0.00 0.00 0.00 4.09
2728 5426 0.731417 CGGCATCAAAGAAGGCTCTG 59.269 55.000 0.00 0.00 30.03 3.35
2729 5427 1.831580 GGCATCAAAGAAGGCTCTGT 58.168 50.000 0.00 0.00 30.03 3.41
2730 5428 1.742268 GGCATCAAAGAAGGCTCTGTC 59.258 52.381 0.00 0.00 30.03 3.51
2731 5429 1.396301 GCATCAAAGAAGGCTCTGTCG 59.604 52.381 0.00 0.00 30.03 4.35
2732 5430 2.932622 GCATCAAAGAAGGCTCTGTCGA 60.933 50.000 0.00 0.00 30.03 4.20
2733 5431 2.732412 TCAAAGAAGGCTCTGTCGAG 57.268 50.000 0.00 0.00 40.35 4.04
2734 5432 1.273606 TCAAAGAAGGCTCTGTCGAGG 59.726 52.381 0.00 0.00 37.75 4.63
2741 5439 4.069232 CTCTGTCGAGGCGGGCAA 62.069 66.667 3.78 0.00 33.51 4.52
2742 5440 3.997064 CTCTGTCGAGGCGGGCAAG 62.997 68.421 3.78 0.00 33.51 4.01
2743 5441 4.069232 CTGTCGAGGCGGGCAAGA 62.069 66.667 3.78 0.00 0.00 3.02
2744 5442 3.997064 CTGTCGAGGCGGGCAAGAG 62.997 68.421 3.78 0.00 0.00 2.85
2745 5443 4.070552 GTCGAGGCGGGCAAGAGT 62.071 66.667 3.78 0.00 0.00 3.24
2746 5444 2.361992 TCGAGGCGGGCAAGAGTA 60.362 61.111 3.78 0.00 0.00 2.59
2747 5445 2.105128 CGAGGCGGGCAAGAGTAG 59.895 66.667 3.78 0.00 0.00 2.57
2748 5446 2.501610 GAGGCGGGCAAGAGTAGG 59.498 66.667 3.78 0.00 0.00 3.18
2749 5447 3.083997 AGGCGGGCAAGAGTAGGG 61.084 66.667 3.78 0.00 0.00 3.53
2750 5448 4.176752 GGCGGGCAAGAGTAGGGG 62.177 72.222 0.00 0.00 0.00 4.79
2751 5449 4.176752 GCGGGCAAGAGTAGGGGG 62.177 72.222 0.00 0.00 0.00 5.40
2752 5450 2.365105 CGGGCAAGAGTAGGGGGA 60.365 66.667 0.00 0.00 0.00 4.81
2753 5451 2.435693 CGGGCAAGAGTAGGGGGAG 61.436 68.421 0.00 0.00 0.00 4.30
2754 5452 2.747443 GGGCAAGAGTAGGGGGAGC 61.747 68.421 0.00 0.00 0.00 4.70
2755 5453 2.501610 GCAAGAGTAGGGGGAGCG 59.498 66.667 0.00 0.00 0.00 5.03
2756 5454 2.501610 CAAGAGTAGGGGGAGCGC 59.498 66.667 0.00 0.00 0.00 5.92
2757 5455 2.060980 CAAGAGTAGGGGGAGCGCT 61.061 63.158 11.27 11.27 0.00 5.92
2758 5456 1.306226 AAGAGTAGGGGGAGCGCTT 60.306 57.895 13.26 0.00 0.00 4.68
2759 5457 1.617947 AAGAGTAGGGGGAGCGCTTG 61.618 60.000 13.26 0.00 0.00 4.01
2760 5458 2.284699 AGTAGGGGGAGCGCTTGT 60.285 61.111 13.26 0.00 0.00 3.16
2761 5459 1.900545 GAGTAGGGGGAGCGCTTGTT 61.901 60.000 13.26 0.00 0.00 2.83
2762 5460 1.745489 GTAGGGGGAGCGCTTGTTG 60.745 63.158 13.26 0.00 0.00 3.33
2763 5461 2.966732 TAGGGGGAGCGCTTGTTGG 61.967 63.158 13.26 0.00 0.00 3.77
2764 5462 4.660938 GGGGGAGCGCTTGTTGGT 62.661 66.667 13.26 0.00 0.00 3.67
2765 5463 3.056328 GGGGAGCGCTTGTTGGTC 61.056 66.667 13.26 0.00 0.00 4.02
2768 5466 3.257933 GAGCGCTTGTTGGTCCAG 58.742 61.111 13.26 0.00 0.00 3.86
2769 5467 2.281761 AGCGCTTGTTGGTCCAGG 60.282 61.111 2.64 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 6.321821 AGGTAGTATTTTCCTATGGTGCAA 57.678 37.500 0.00 0.00 0.00 4.08
192 193 1.692411 ACTCTTTGTCAGTTTGGGGC 58.308 50.000 0.00 0.00 0.00 5.80
254 255 6.493189 TTTTCTTCCATAGGCCAAAAGTTT 57.507 33.333 5.01 0.00 0.00 2.66
684 688 5.751680 CACTACACAAAATGAGACAACCAG 58.248 41.667 0.00 0.00 0.00 4.00
860 896 5.121298 TGAATGAGAGTGCAAATTTCGAGAG 59.879 40.000 0.00 0.00 0.00 3.20
1143 1184 4.529377 TCGAAAGTCCTAAGCCTTCCTAAA 59.471 41.667 0.00 0.00 0.00 1.85
1358 3158 8.934697 TCCTTCTTATTAGCCTGTACAATACAT 58.065 33.333 0.00 0.00 38.15 2.29
1367 3167 5.045578 TGCTTTCTCCTTCTTATTAGCCTGT 60.046 40.000 0.00 0.00 0.00 4.00
1507 3319 8.386606 CAATTGTTTCTTCTAGATCTACAGCAC 58.613 37.037 0.00 0.27 0.00 4.40
1646 3458 3.694566 GAGTAGTAACCTTTGGCAATGGG 59.305 47.826 29.18 22.25 0.00 4.00
1839 4517 7.206981 AGTTTAACAAGACACAGGAATCATG 57.793 36.000 0.00 0.00 0.00 3.07
2056 4754 3.616219 ACACCAACACAGTACAACACAT 58.384 40.909 0.00 0.00 0.00 3.21
2057 4755 3.060736 ACACCAACACAGTACAACACA 57.939 42.857 0.00 0.00 0.00 3.72
2423 5121 3.193479 ACCGTTACGTCCCTACTTTTAGG 59.807 47.826 3.52 0.00 44.43 2.69
2424 5122 4.168760 CACCGTTACGTCCCTACTTTTAG 58.831 47.826 3.52 0.00 0.00 1.85
2425 5123 3.572255 ACACCGTTACGTCCCTACTTTTA 59.428 43.478 3.52 0.00 0.00 1.52
2426 5124 2.365293 ACACCGTTACGTCCCTACTTTT 59.635 45.455 3.52 0.00 0.00 2.27
2427 5125 1.963515 ACACCGTTACGTCCCTACTTT 59.036 47.619 3.52 0.00 0.00 2.66
2428 5126 1.620822 ACACCGTTACGTCCCTACTT 58.379 50.000 3.52 0.00 0.00 2.24
2429 5127 1.270550 CAACACCGTTACGTCCCTACT 59.729 52.381 3.52 0.00 0.00 2.57
2430 5128 1.701704 CAACACCGTTACGTCCCTAC 58.298 55.000 3.52 0.00 0.00 3.18
2431 5129 0.038343 GCAACACCGTTACGTCCCTA 60.038 55.000 3.52 0.00 0.00 3.53
2432 5130 1.301165 GCAACACCGTTACGTCCCT 60.301 57.895 3.52 0.00 0.00 4.20
2433 5131 2.319841 GGCAACACCGTTACGTCCC 61.320 63.158 3.52 0.00 0.00 4.46
2434 5132 0.881600 AAGGCAACACCGTTACGTCC 60.882 55.000 3.52 0.00 46.52 4.79
2435 5133 0.939419 AAAGGCAACACCGTTACGTC 59.061 50.000 3.52 0.00 46.52 4.34
2436 5134 1.331447 GAAAAGGCAACACCGTTACGT 59.669 47.619 3.52 0.00 46.52 3.57
2437 5135 1.334329 GGAAAAGGCAACACCGTTACG 60.334 52.381 0.00 0.00 46.52 3.18
2438 5136 1.677052 TGGAAAAGGCAACACCGTTAC 59.323 47.619 0.00 0.00 46.52 2.50
2439 5137 2.054232 TGGAAAAGGCAACACCGTTA 57.946 45.000 0.00 0.00 46.52 3.18
2440 5138 1.187087 TTGGAAAAGGCAACACCGTT 58.813 45.000 0.00 0.00 46.52 4.44
2441 5139 1.134936 GTTTGGAAAAGGCAACACCGT 60.135 47.619 0.00 0.00 46.52 4.83
2442 5140 1.136110 AGTTTGGAAAAGGCAACACCG 59.864 47.619 0.00 0.00 46.52 4.94
2443 5141 2.979814 AGTTTGGAAAAGGCAACACC 57.020 45.000 0.00 0.00 41.41 4.16
2444 5142 4.092821 GTCAAAGTTTGGAAAAGGCAACAC 59.907 41.667 15.47 0.00 41.41 3.32
2445 5143 4.249661 GTCAAAGTTTGGAAAAGGCAACA 58.750 39.130 15.47 0.00 41.41 3.33
2446 5144 3.621268 GGTCAAAGTTTGGAAAAGGCAAC 59.379 43.478 15.47 3.14 0.00 4.17
2447 5145 3.677424 CGGTCAAAGTTTGGAAAAGGCAA 60.677 43.478 15.47 0.00 0.00 4.52
2448 5146 2.159170 CGGTCAAAGTTTGGAAAAGGCA 60.159 45.455 15.47 0.00 0.00 4.75
2449 5147 2.469826 CGGTCAAAGTTTGGAAAAGGC 58.530 47.619 15.47 0.00 0.00 4.35
2450 5148 2.469826 GCGGTCAAAGTTTGGAAAAGG 58.530 47.619 15.47 1.64 0.00 3.11
2451 5149 2.469826 GGCGGTCAAAGTTTGGAAAAG 58.530 47.619 15.47 4.81 0.00 2.27
2452 5150 1.202313 CGGCGGTCAAAGTTTGGAAAA 60.202 47.619 15.47 0.00 0.00 2.29
2453 5151 0.382515 CGGCGGTCAAAGTTTGGAAA 59.617 50.000 15.47 0.00 0.00 3.13
2454 5152 0.464013 TCGGCGGTCAAAGTTTGGAA 60.464 50.000 15.47 0.00 0.00 3.53
2455 5153 1.146485 TCGGCGGTCAAAGTTTGGA 59.854 52.632 15.47 1.14 0.00 3.53
2456 5154 1.281656 GTCGGCGGTCAAAGTTTGG 59.718 57.895 15.47 1.11 0.00 3.28
2457 5155 1.281656 GGTCGGCGGTCAAAGTTTG 59.718 57.895 7.21 9.44 0.00 2.93
2458 5156 2.248835 CGGTCGGCGGTCAAAGTTT 61.249 57.895 7.21 0.00 0.00 2.66
2459 5157 2.663852 CGGTCGGCGGTCAAAGTT 60.664 61.111 7.21 0.00 0.00 2.66
2460 5158 4.675029 CCGGTCGGCGGTCAAAGT 62.675 66.667 7.21 0.00 0.00 2.66
2461 5159 3.869473 TTCCGGTCGGCGGTCAAAG 62.869 63.158 7.21 0.00 34.68 2.77
2462 5160 3.457625 TTTCCGGTCGGCGGTCAAA 62.458 57.895 7.21 0.00 34.68 2.69
2463 5161 3.869473 CTTTCCGGTCGGCGGTCAA 62.869 63.158 7.21 0.00 34.68 3.18
2464 5162 4.367023 CTTTCCGGTCGGCGGTCA 62.367 66.667 7.21 0.00 34.68 4.02
2468 5166 3.023591 GAAAGCTTTCCGGTCGGCG 62.024 63.158 25.80 0.00 34.68 6.46
2469 5167 1.235281 AAGAAAGCTTTCCGGTCGGC 61.235 55.000 30.83 8.67 37.92 5.54
2470 5168 1.730612 GTAAGAAAGCTTTCCGGTCGG 59.269 52.381 30.83 2.52 37.92 4.79
2471 5169 1.389106 CGTAAGAAAGCTTTCCGGTCG 59.611 52.381 30.83 24.73 37.92 4.79
2472 5170 1.128136 GCGTAAGAAAGCTTTCCGGTC 59.872 52.381 30.83 18.97 37.92 4.79
2473 5171 1.154197 GCGTAAGAAAGCTTTCCGGT 58.846 50.000 30.83 20.35 37.92 5.28
2474 5172 0.094730 CGCGTAAGAAAGCTTTCCGG 59.905 55.000 30.83 19.65 37.92 5.14
2475 5173 1.059264 CTCGCGTAAGAAAGCTTTCCG 59.941 52.381 30.83 26.81 37.92 4.30
2476 5174 1.393883 CCTCGCGTAAGAAAGCTTTCC 59.606 52.381 30.83 17.38 37.92 3.13
2477 5175 1.201932 GCCTCGCGTAAGAAAGCTTTC 60.202 52.381 28.21 28.21 43.02 2.62
2478 5176 0.796927 GCCTCGCGTAAGAAAGCTTT 59.203 50.000 12.53 12.53 43.02 3.51
2479 5177 1.019805 GGCCTCGCGTAAGAAAGCTT 61.020 55.000 5.77 0.00 43.02 3.74
2480 5178 1.448013 GGCCTCGCGTAAGAAAGCT 60.448 57.895 5.77 0.00 43.02 3.74
2481 5179 1.696832 CTGGCCTCGCGTAAGAAAGC 61.697 60.000 5.77 0.00 43.02 3.51
2482 5180 1.696832 GCTGGCCTCGCGTAAGAAAG 61.697 60.000 5.77 0.00 43.02 2.62
2483 5181 1.740296 GCTGGCCTCGCGTAAGAAA 60.740 57.895 5.77 0.00 43.02 2.52
2484 5182 2.125673 GCTGGCCTCGCGTAAGAA 60.126 61.111 5.77 0.00 43.02 2.52
2485 5183 4.492160 CGCTGGCCTCGCGTAAGA 62.492 66.667 25.28 0.00 45.13 2.10
2522 5220 4.814294 CTGGACGGGGCGTGTAGC 62.814 72.222 0.00 0.00 41.37 3.58
2523 5221 4.143333 CCTGGACGGGGCGTGTAG 62.143 72.222 0.00 0.00 41.37 2.74
2530 5228 3.465403 CTCTCTGCCTGGACGGGG 61.465 72.222 0.00 0.00 0.00 5.73
2531 5229 3.465403 CCTCTCTGCCTGGACGGG 61.465 72.222 0.00 0.00 0.00 5.28
2532 5230 3.465403 CCCTCTCTGCCTGGACGG 61.465 72.222 0.00 0.00 0.00 4.79
2533 5231 2.681778 ACCCTCTCTGCCTGGACG 60.682 66.667 0.00 0.00 0.00 4.79
2534 5232 2.664081 CCACCCTCTCTGCCTGGAC 61.664 68.421 0.00 0.00 0.00 4.02
2535 5233 1.811025 TACCACCCTCTCTGCCTGGA 61.811 60.000 0.00 0.00 0.00 3.86
2536 5234 1.306141 TACCACCCTCTCTGCCTGG 60.306 63.158 0.00 0.00 0.00 4.45
2537 5235 1.333636 CCTACCACCCTCTCTGCCTG 61.334 65.000 0.00 0.00 0.00 4.85
2538 5236 1.002274 CCTACCACCCTCTCTGCCT 59.998 63.158 0.00 0.00 0.00 4.75
2539 5237 2.066999 CCCTACCACCCTCTCTGCC 61.067 68.421 0.00 0.00 0.00 4.85
2540 5238 1.001760 TCCCTACCACCCTCTCTGC 59.998 63.158 0.00 0.00 0.00 4.26
2541 5239 0.397816 CCTCCCTACCACCCTCTCTG 60.398 65.000 0.00 0.00 0.00 3.35
2542 5240 0.555369 TCCTCCCTACCACCCTCTCT 60.555 60.000 0.00 0.00 0.00 3.10
2543 5241 0.338814 TTCCTCCCTACCACCCTCTC 59.661 60.000 0.00 0.00 0.00 3.20
2544 5242 0.340208 CTTCCTCCCTACCACCCTCT 59.660 60.000 0.00 0.00 0.00 3.69
2545 5243 0.338814 TCTTCCTCCCTACCACCCTC 59.661 60.000 0.00 0.00 0.00 4.30
2546 5244 0.340208 CTCTTCCTCCCTACCACCCT 59.660 60.000 0.00 0.00 0.00 4.34
2547 5245 0.691413 CCTCTTCCTCCCTACCACCC 60.691 65.000 0.00 0.00 0.00 4.61
2548 5246 0.691413 CCCTCTTCCTCCCTACCACC 60.691 65.000 0.00 0.00 0.00 4.61
2549 5247 0.691413 CCCCTCTTCCTCCCTACCAC 60.691 65.000 0.00 0.00 0.00 4.16
2550 5248 1.710341 CCCCTCTTCCTCCCTACCA 59.290 63.158 0.00 0.00 0.00 3.25
2551 5249 1.074395 CCCCCTCTTCCTCCCTACC 60.074 68.421 0.00 0.00 0.00 3.18
2552 5250 0.044397 AACCCCCTCTTCCTCCCTAC 59.956 60.000 0.00 0.00 0.00 3.18
2553 5251 1.579191 CTAACCCCCTCTTCCTCCCTA 59.421 57.143 0.00 0.00 0.00 3.53
2554 5252 0.343726 CTAACCCCCTCTTCCTCCCT 59.656 60.000 0.00 0.00 0.00 4.20
2555 5253 0.044397 ACTAACCCCCTCTTCCTCCC 59.956 60.000 0.00 0.00 0.00 4.30
2556 5254 1.968278 AACTAACCCCCTCTTCCTCC 58.032 55.000 0.00 0.00 0.00 4.30
2557 5255 2.435069 GCTAACTAACCCCCTCTTCCTC 59.565 54.545 0.00 0.00 0.00 3.71
2558 5256 2.479340 GCTAACTAACCCCCTCTTCCT 58.521 52.381 0.00 0.00 0.00 3.36
2559 5257 1.489649 GGCTAACTAACCCCCTCTTCC 59.510 57.143 0.00 0.00 0.00 3.46
2560 5258 2.170817 CTGGCTAACTAACCCCCTCTTC 59.829 54.545 0.00 0.00 0.00 2.87
2561 5259 2.197465 CTGGCTAACTAACCCCCTCTT 58.803 52.381 0.00 0.00 0.00 2.85
2562 5260 1.625508 CCTGGCTAACTAACCCCCTCT 60.626 57.143 0.00 0.00 0.00 3.69
2563 5261 0.837940 CCTGGCTAACTAACCCCCTC 59.162 60.000 0.00 0.00 0.00 4.30
2564 5262 1.279749 GCCTGGCTAACTAACCCCCT 61.280 60.000 12.43 0.00 0.00 4.79
2565 5263 1.226542 GCCTGGCTAACTAACCCCC 59.773 63.158 12.43 0.00 0.00 5.40
2566 5264 0.107165 CTGCCTGGCTAACTAACCCC 60.107 60.000 21.03 0.00 0.00 4.95
2567 5265 0.618981 ACTGCCTGGCTAACTAACCC 59.381 55.000 21.03 0.00 0.00 4.11
2568 5266 2.491675 AACTGCCTGGCTAACTAACC 57.508 50.000 21.03 0.00 0.00 2.85
2569 5267 3.408634 TGAAACTGCCTGGCTAACTAAC 58.591 45.455 21.03 6.14 0.00 2.34
2570 5268 3.780804 TGAAACTGCCTGGCTAACTAA 57.219 42.857 21.03 0.00 0.00 2.24
2571 5269 3.780804 TTGAAACTGCCTGGCTAACTA 57.219 42.857 21.03 0.00 0.00 2.24
2572 5270 2.656947 TTGAAACTGCCTGGCTAACT 57.343 45.000 21.03 1.72 0.00 2.24
2573 5271 2.884639 TCTTTGAAACTGCCTGGCTAAC 59.115 45.455 21.03 7.49 0.00 2.34
2574 5272 3.222173 TCTTTGAAACTGCCTGGCTAA 57.778 42.857 21.03 0.00 0.00 3.09
2575 5273 2.949177 TCTTTGAAACTGCCTGGCTA 57.051 45.000 21.03 5.44 0.00 3.93
2576 5274 1.959282 CTTCTTTGAAACTGCCTGGCT 59.041 47.619 21.03 0.00 0.00 4.75
2577 5275 1.956477 TCTTCTTTGAAACTGCCTGGC 59.044 47.619 12.87 12.87 0.00 4.85
2578 5276 4.654091 TTTCTTCTTTGAAACTGCCTGG 57.346 40.909 0.00 0.00 31.81 4.45
2586 5284 5.501897 GCTTCGACTCGTTTCTTCTTTGAAA 60.502 40.000 0.00 0.00 34.05 2.69
2587 5285 4.025979 GCTTCGACTCGTTTCTTCTTTGAA 60.026 41.667 0.00 0.00 0.00 2.69
2588 5286 3.489785 GCTTCGACTCGTTTCTTCTTTGA 59.510 43.478 0.00 0.00 0.00 2.69
2589 5287 3.659364 CGCTTCGACTCGTTTCTTCTTTG 60.659 47.826 0.00 0.00 0.00 2.77
2590 5288 2.471743 CGCTTCGACTCGTTTCTTCTTT 59.528 45.455 0.00 0.00 0.00 2.52
2591 5289 2.052157 CGCTTCGACTCGTTTCTTCTT 58.948 47.619 0.00 0.00 0.00 2.52
2592 5290 1.666311 CCGCTTCGACTCGTTTCTTCT 60.666 52.381 0.00 0.00 0.00 2.85
2593 5291 0.708918 CCGCTTCGACTCGTTTCTTC 59.291 55.000 0.00 0.00 0.00 2.87
2594 5292 0.666577 CCCGCTTCGACTCGTTTCTT 60.667 55.000 0.00 0.00 0.00 2.52
2595 5293 1.080705 CCCGCTTCGACTCGTTTCT 60.081 57.895 0.00 0.00 0.00 2.52
2596 5294 0.665369 TTCCCGCTTCGACTCGTTTC 60.665 55.000 0.00 0.00 0.00 2.78
2597 5295 0.037605 ATTCCCGCTTCGACTCGTTT 60.038 50.000 0.00 0.00 0.00 3.60
2598 5296 0.458025 GATTCCCGCTTCGACTCGTT 60.458 55.000 0.00 0.00 0.00 3.85
2599 5297 1.139095 GATTCCCGCTTCGACTCGT 59.861 57.895 0.00 0.00 0.00 4.18
2600 5298 0.179134 AAGATTCCCGCTTCGACTCG 60.179 55.000 0.00 0.00 0.00 4.18
2601 5299 1.281899 CAAGATTCCCGCTTCGACTC 58.718 55.000 0.00 0.00 0.00 3.36
2602 5300 0.108138 CCAAGATTCCCGCTTCGACT 60.108 55.000 0.00 0.00 0.00 4.18
2603 5301 0.391263 ACCAAGATTCCCGCTTCGAC 60.391 55.000 0.00 0.00 0.00 4.20
2604 5302 0.108329 GACCAAGATTCCCGCTTCGA 60.108 55.000 0.00 0.00 0.00 3.71
2605 5303 1.421410 CGACCAAGATTCCCGCTTCG 61.421 60.000 0.00 0.00 0.00 3.79
2606 5304 0.108329 TCGACCAAGATTCCCGCTTC 60.108 55.000 0.00 0.00 0.00 3.86
2607 5305 0.108138 CTCGACCAAGATTCCCGCTT 60.108 55.000 0.00 0.00 0.00 4.68
2608 5306 1.517832 CTCGACCAAGATTCCCGCT 59.482 57.895 0.00 0.00 0.00 5.52
2609 5307 1.521681 CCTCGACCAAGATTCCCGC 60.522 63.158 0.00 0.00 0.00 6.13
2610 5308 1.521681 GCCTCGACCAAGATTCCCG 60.522 63.158 0.00 0.00 0.00 5.14
2611 5309 0.462759 CTGCCTCGACCAAGATTCCC 60.463 60.000 0.00 0.00 0.00 3.97
2612 5310 0.537188 TCTGCCTCGACCAAGATTCC 59.463 55.000 0.00 0.00 0.00 3.01
2613 5311 2.386661 TTCTGCCTCGACCAAGATTC 57.613 50.000 0.00 0.00 0.00 2.52
2614 5312 2.427506 GTTTCTGCCTCGACCAAGATT 58.572 47.619 0.00 0.00 0.00 2.40
2615 5313 1.673033 CGTTTCTGCCTCGACCAAGAT 60.673 52.381 0.00 0.00 0.00 2.40
2616 5314 0.319555 CGTTTCTGCCTCGACCAAGA 60.320 55.000 0.00 0.00 0.00 3.02
2617 5315 0.319555 TCGTTTCTGCCTCGACCAAG 60.320 55.000 0.00 0.00 0.00 3.61
2618 5316 0.599204 GTCGTTTCTGCCTCGACCAA 60.599 55.000 5.77 0.00 45.08 3.67
2619 5317 1.006571 GTCGTTTCTGCCTCGACCA 60.007 57.895 5.77 0.00 45.08 4.02
2620 5318 3.857909 GTCGTTTCTGCCTCGACC 58.142 61.111 5.77 0.00 45.08 4.79
2622 5320 1.176619 TCTGGTCGTTTCTGCCTCGA 61.177 55.000 0.00 0.00 0.00 4.04
2623 5321 0.734253 CTCTGGTCGTTTCTGCCTCG 60.734 60.000 0.00 0.00 0.00 4.63
2624 5322 0.390472 CCTCTGGTCGTTTCTGCCTC 60.390 60.000 0.00 0.00 0.00 4.70
2625 5323 1.674057 CCTCTGGTCGTTTCTGCCT 59.326 57.895 0.00 0.00 0.00 4.75
2626 5324 1.376037 CCCTCTGGTCGTTTCTGCC 60.376 63.158 0.00 0.00 0.00 4.85
2627 5325 0.670854 GTCCCTCTGGTCGTTTCTGC 60.671 60.000 0.00 0.00 0.00 4.26
2628 5326 0.679505 TGTCCCTCTGGTCGTTTCTG 59.320 55.000 0.00 0.00 0.00 3.02
2629 5327 1.276421 CATGTCCCTCTGGTCGTTTCT 59.724 52.381 0.00 0.00 0.00 2.52
2630 5328 1.275291 TCATGTCCCTCTGGTCGTTTC 59.725 52.381 0.00 0.00 0.00 2.78
2631 5329 1.348064 TCATGTCCCTCTGGTCGTTT 58.652 50.000 0.00 0.00 0.00 3.60
2632 5330 1.482593 GATCATGTCCCTCTGGTCGTT 59.517 52.381 0.00 0.00 0.00 3.85
2633 5331 1.115467 GATCATGTCCCTCTGGTCGT 58.885 55.000 0.00 0.00 0.00 4.34
2634 5332 0.031314 CGATCATGTCCCTCTGGTCG 59.969 60.000 0.00 0.00 39.36 4.79
2635 5333 0.249657 GCGATCATGTCCCTCTGGTC 60.250 60.000 0.00 0.00 0.00 4.02
2636 5334 0.689080 AGCGATCATGTCCCTCTGGT 60.689 55.000 0.00 0.00 0.00 4.00
2637 5335 0.249784 CAGCGATCATGTCCCTCTGG 60.250 60.000 0.00 0.00 0.00 3.86
2638 5336 0.249784 CCAGCGATCATGTCCCTCTG 60.250 60.000 0.00 0.00 0.00 3.35
2639 5337 2.037620 GCCAGCGATCATGTCCCTCT 62.038 60.000 0.00 0.00 0.00 3.69
2640 5338 1.596477 GCCAGCGATCATGTCCCTC 60.596 63.158 0.00 0.00 0.00 4.30
2641 5339 2.321263 CTGCCAGCGATCATGTCCCT 62.321 60.000 0.00 0.00 0.00 4.20
2642 5340 1.890979 CTGCCAGCGATCATGTCCC 60.891 63.158 0.00 0.00 0.00 4.46
2643 5341 0.104855 TACTGCCAGCGATCATGTCC 59.895 55.000 0.00 0.00 0.00 4.02
2644 5342 1.212616 GTACTGCCAGCGATCATGTC 58.787 55.000 0.00 0.00 0.00 3.06
2645 5343 0.528466 CGTACTGCCAGCGATCATGT 60.528 55.000 0.00 0.00 0.00 3.21
2646 5344 1.217585 CCGTACTGCCAGCGATCATG 61.218 60.000 0.00 0.00 0.00 3.07
2647 5345 1.068083 CCGTACTGCCAGCGATCAT 59.932 57.895 0.00 0.00 0.00 2.45
2648 5346 2.494445 CCGTACTGCCAGCGATCA 59.506 61.111 0.00 0.00 0.00 2.92
2649 5347 2.279517 CCCGTACTGCCAGCGATC 60.280 66.667 0.00 0.00 0.00 3.69
2650 5348 3.849951 CCCCGTACTGCCAGCGAT 61.850 66.667 0.00 0.00 0.00 4.58
2652 5350 4.814294 GTCCCCGTACTGCCAGCG 62.814 72.222 0.00 0.00 0.00 5.18
2653 5351 4.814294 CGTCCCCGTACTGCCAGC 62.814 72.222 0.00 0.00 0.00 4.85
2663 5361 4.803426 GCTCAGCTCACGTCCCCG 62.803 72.222 0.00 0.00 40.83 5.73
2664 5362 4.803426 CGCTCAGCTCACGTCCCC 62.803 72.222 0.00 0.00 0.00 4.81
2665 5363 3.691744 CTCGCTCAGCTCACGTCCC 62.692 68.421 0.00 0.00 0.00 4.46
2666 5364 2.202544 CTCGCTCAGCTCACGTCC 60.203 66.667 0.00 0.00 0.00 4.79
2667 5365 2.202544 CCTCGCTCAGCTCACGTC 60.203 66.667 0.00 0.00 0.00 4.34
2668 5366 2.673341 TCCTCGCTCAGCTCACGT 60.673 61.111 0.00 0.00 0.00 4.49
2669 5367 2.101965 CTCCTCGCTCAGCTCACG 59.898 66.667 0.00 0.00 0.00 4.35
2670 5368 1.138671 GACTCCTCGCTCAGCTCAC 59.861 63.158 0.00 0.00 0.00 3.51
2671 5369 2.049185 GGACTCCTCGCTCAGCTCA 61.049 63.158 0.00 0.00 0.00 4.26
2672 5370 2.804856 GGACTCCTCGCTCAGCTC 59.195 66.667 0.00 0.00 0.00 4.09
2673 5371 3.137459 CGGACTCCTCGCTCAGCT 61.137 66.667 0.00 0.00 0.00 4.24
2674 5372 4.200283 CCGGACTCCTCGCTCAGC 62.200 72.222 0.00 0.00 0.00 4.26
2675 5373 3.522731 CCCGGACTCCTCGCTCAG 61.523 72.222 0.73 0.00 0.00 3.35
2676 5374 3.578968 TTCCCGGACTCCTCGCTCA 62.579 63.158 0.73 0.00 0.00 4.26
2677 5375 2.754658 TTCCCGGACTCCTCGCTC 60.755 66.667 0.73 0.00 0.00 5.03
2678 5376 2.756283 CTTCCCGGACTCCTCGCT 60.756 66.667 0.73 0.00 0.00 4.93
2679 5377 2.754658 TCTTCCCGGACTCCTCGC 60.755 66.667 0.73 0.00 0.00 5.03
2680 5378 2.122167 CCTCTTCCCGGACTCCTCG 61.122 68.421 0.73 0.00 0.00 4.63
2681 5379 1.758906 CCCTCTTCCCGGACTCCTC 60.759 68.421 0.73 0.00 0.00 3.71
2682 5380 2.364961 CCCTCTTCCCGGACTCCT 59.635 66.667 0.73 0.00 0.00 3.69
2683 5381 3.471806 GCCCTCTTCCCGGACTCC 61.472 72.222 0.73 0.00 0.00 3.85
2684 5382 3.839432 CGCCCTCTTCCCGGACTC 61.839 72.222 0.73 0.00 0.00 3.36
2685 5383 4.698625 ACGCCCTCTTCCCGGACT 62.699 66.667 0.73 0.00 0.00 3.85
2686 5384 4.452733 CACGCCCTCTTCCCGGAC 62.453 72.222 0.73 0.00 0.00 4.79
2704 5402 1.315257 CCTTCTTTGATGCCGGGTGG 61.315 60.000 2.18 0.00 38.77 4.61
2705 5403 1.937546 GCCTTCTTTGATGCCGGGTG 61.938 60.000 2.18 0.00 0.00 4.61
2706 5404 1.678970 GCCTTCTTTGATGCCGGGT 60.679 57.895 2.18 0.00 0.00 5.28
2707 5405 1.379044 AGCCTTCTTTGATGCCGGG 60.379 57.895 2.18 0.00 0.00 5.73
2708 5406 0.393537 AGAGCCTTCTTTGATGCCGG 60.394 55.000 0.00 0.00 0.00 6.13
2709 5407 0.731417 CAGAGCCTTCTTTGATGCCG 59.269 55.000 0.00 0.00 0.00 5.69
2710 5408 1.742268 GACAGAGCCTTCTTTGATGCC 59.258 52.381 0.00 0.00 0.00 4.40
2711 5409 1.396301 CGACAGAGCCTTCTTTGATGC 59.604 52.381 0.00 0.00 0.00 3.91
2712 5410 2.928757 CTCGACAGAGCCTTCTTTGATG 59.071 50.000 0.00 0.00 37.73 3.07
2713 5411 2.093764 CCTCGACAGAGCCTTCTTTGAT 60.094 50.000 0.00 0.00 43.05 2.57
2714 5412 1.273606 CCTCGACAGAGCCTTCTTTGA 59.726 52.381 0.00 0.00 43.05 2.69
2715 5413 1.719600 CCTCGACAGAGCCTTCTTTG 58.280 55.000 0.00 0.00 43.05 2.77
2716 5414 0.036858 GCCTCGACAGAGCCTTCTTT 60.037 55.000 0.00 0.00 43.05 2.52
2717 5415 1.594310 GCCTCGACAGAGCCTTCTT 59.406 57.895 0.00 0.00 43.05 2.52
2718 5416 2.705821 CGCCTCGACAGAGCCTTCT 61.706 63.158 0.00 0.00 43.05 2.85
2719 5417 2.202676 CGCCTCGACAGAGCCTTC 60.203 66.667 0.00 0.00 43.05 3.46
2720 5418 3.764466 CCGCCTCGACAGAGCCTT 61.764 66.667 0.00 0.00 43.05 4.35
2724 5422 3.997064 CTTGCCCGCCTCGACAGAG 62.997 68.421 0.00 0.00 43.98 3.35
2725 5423 4.069232 CTTGCCCGCCTCGACAGA 62.069 66.667 0.00 0.00 0.00 3.41
2726 5424 3.997064 CTCTTGCCCGCCTCGACAG 62.997 68.421 0.00 0.00 0.00 3.51
2727 5425 4.069232 CTCTTGCCCGCCTCGACA 62.069 66.667 0.00 0.00 0.00 4.35
2728 5426 2.615262 CTACTCTTGCCCGCCTCGAC 62.615 65.000 0.00 0.00 0.00 4.20
2729 5427 2.361992 TACTCTTGCCCGCCTCGA 60.362 61.111 0.00 0.00 0.00 4.04
2730 5428 2.105128 CTACTCTTGCCCGCCTCG 59.895 66.667 0.00 0.00 0.00 4.63
2731 5429 2.501610 CCTACTCTTGCCCGCCTC 59.498 66.667 0.00 0.00 0.00 4.70
2732 5430 3.083997 CCCTACTCTTGCCCGCCT 61.084 66.667 0.00 0.00 0.00 5.52
2733 5431 4.176752 CCCCTACTCTTGCCCGCC 62.177 72.222 0.00 0.00 0.00 6.13
2734 5432 4.176752 CCCCCTACTCTTGCCCGC 62.177 72.222 0.00 0.00 0.00 6.13
2735 5433 2.365105 TCCCCCTACTCTTGCCCG 60.365 66.667 0.00 0.00 0.00 6.13
2736 5434 2.747443 GCTCCCCCTACTCTTGCCC 61.747 68.421 0.00 0.00 0.00 5.36
2737 5435 2.911928 GCTCCCCCTACTCTTGCC 59.088 66.667 0.00 0.00 0.00 4.52
2738 5436 2.501610 CGCTCCCCCTACTCTTGC 59.498 66.667 0.00 0.00 0.00 4.01
2739 5437 1.617947 AAGCGCTCCCCCTACTCTTG 61.618 60.000 12.06 0.00 0.00 3.02
2740 5438 1.306226 AAGCGCTCCCCCTACTCTT 60.306 57.895 12.06 0.00 0.00 2.85
2741 5439 2.060980 CAAGCGCTCCCCCTACTCT 61.061 63.158 12.06 0.00 0.00 3.24
2742 5440 1.900545 AACAAGCGCTCCCCCTACTC 61.901 60.000 12.06 0.00 0.00 2.59
2743 5441 1.918800 AACAAGCGCTCCCCCTACT 60.919 57.895 12.06 0.00 0.00 2.57
2744 5442 1.745489 CAACAAGCGCTCCCCCTAC 60.745 63.158 12.06 0.00 0.00 3.18
2745 5443 2.668632 CAACAAGCGCTCCCCCTA 59.331 61.111 12.06 0.00 0.00 3.53
2746 5444 4.351054 CCAACAAGCGCTCCCCCT 62.351 66.667 12.06 0.00 0.00 4.79
2747 5445 4.660938 ACCAACAAGCGCTCCCCC 62.661 66.667 12.06 0.00 0.00 5.40
2748 5446 3.056328 GACCAACAAGCGCTCCCC 61.056 66.667 12.06 0.00 0.00 4.81
2749 5447 3.056328 GGACCAACAAGCGCTCCC 61.056 66.667 12.06 0.00 0.00 4.30
2750 5448 2.281484 TGGACCAACAAGCGCTCC 60.281 61.111 12.06 6.50 0.00 4.70
2751 5449 2.328099 CCTGGACCAACAAGCGCTC 61.328 63.158 12.06 0.00 0.00 5.03
2752 5450 2.281761 CCTGGACCAACAAGCGCT 60.282 61.111 2.64 2.64 0.00 5.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.