Multiple sequence alignment - TraesCS6B01G135300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G135300 chr6B 100.000 3809 0 0 1 3809 132433436 132429628 0.000000e+00 7035.0
1 TraesCS6B01G135300 chr6B 96.944 589 15 2 3223 3809 646915192 646915779 0.000000e+00 985.0
2 TraesCS6B01G135300 chr6B 93.529 170 11 0 3061 3230 57750065 57749896 1.760000e-63 254.0
3 TraesCS6B01G135300 chr6A 96.318 2200 49 10 623 2811 74907250 74905072 0.000000e+00 3585.0
4 TraesCS6B01G135300 chr6A 90.847 295 12 5 194 475 74972597 74972305 7.720000e-102 381.0
5 TraesCS6B01G135300 chr6A 93.103 174 12 0 3057 3230 419484963 419485136 4.880000e-64 255.0
6 TraesCS6B01G135300 chr6A 91.549 71 6 0 2994 3064 74905078 74905008 8.710000e-17 99.0
7 TraesCS6B01G135300 chr6D 96.211 1953 53 6 874 2811 58856861 58854915 0.000000e+00 3177.0
8 TraesCS6B01G135300 chr6D 88.406 138 8 1 733 870 58896009 58895880 3.940000e-35 159.0
9 TraesCS6B01G135300 chr6D 94.030 67 4 0 2994 3060 58854921 58854855 6.730000e-18 102.0
10 TraesCS6B01G135300 chr6D 94.030 67 4 0 483 549 58896243 58896177 6.730000e-18 102.0
11 TraesCS6B01G135300 chr4D 94.828 2030 67 10 786 2811 133468692 133470687 0.000000e+00 3133.0
12 TraesCS6B01G135300 chr4D 84.275 407 27 14 1 394 133467914 133468296 2.800000e-96 363.0
13 TraesCS6B01G135300 chr4D 89.247 186 11 3 581 762 133468417 133468597 1.380000e-54 224.0
14 TraesCS6B01G135300 chr4A 95.038 927 37 1 1856 2782 428164093 428163176 0.000000e+00 1448.0
15 TraesCS6B01G135300 chr4A 91.675 1021 46 22 591 1578 428260074 428259060 0.000000e+00 1378.0
16 TraesCS6B01G135300 chr4A 88.252 349 28 5 1 348 428263441 428263105 4.580000e-109 405.0
17 TraesCS6B01G135300 chr4A 92.883 281 11 1 1574 1854 428253791 428253520 2.130000e-107 399.0
18 TraesCS6B01G135300 chr4A 94.083 169 10 0 3062 3230 477951560 477951728 1.360000e-64 257.0
19 TraesCS6B01G135300 chr4A 90.244 82 3 2 349 430 428261522 428261446 6.730000e-18 102.0
20 TraesCS6B01G135300 chrUn 97.241 580 15 1 3230 3809 58377744 58378322 0.000000e+00 981.0
21 TraesCS6B01G135300 chr5A 97.237 579 16 0 3231 3809 125122795 125122217 0.000000e+00 981.0
22 TraesCS6B01G135300 chr5A 80.999 721 125 8 2027 2735 626119929 626119209 2.570000e-156 562.0
23 TraesCS6B01G135300 chr4B 97.074 581 17 0 3229 3809 662087421 662088001 0.000000e+00 979.0
24 TraesCS6B01G135300 chr4B 95.775 426 18 0 2290 2715 161620195 161619770 0.000000e+00 688.0
25 TraesCS6B01G135300 chr4B 87.795 508 23 12 1 484 161622442 161621950 3.320000e-155 558.0
26 TraesCS6B01G135300 chr4B 83.384 331 15 15 755 1081 161621305 161621011 1.740000e-68 270.0
27 TraesCS6B01G135300 chr4B 94.152 171 10 0 3060 3230 529353158 529352988 1.050000e-65 261.0
28 TraesCS6B01G135300 chr4B 91.304 184 13 3 2811 2993 565206899 565207080 8.170000e-62 248.0
29 TraesCS6B01G135300 chr4B 90.217 184 17 1 2811 2993 397033786 397033969 4.920000e-59 239.0
30 TraesCS6B01G135300 chr4B 94.000 50 3 0 544 593 124736812 124736861 4.080000e-10 76.8
31 TraesCS6B01G135300 chr2B 96.769 588 17 1 3224 3809 316104090 316103503 0.000000e+00 979.0
32 TraesCS6B01G135300 chr2B 96.599 588 17 3 3224 3809 118827090 118826504 0.000000e+00 972.0
33 TraesCS6B01G135300 chr2B 91.257 183 14 2 2814 2994 582315179 582314997 8.170000e-62 248.0
34 TraesCS6B01G135300 chr2B 90.811 185 16 1 2812 2996 391452509 391452326 2.940000e-61 246.0
35 TraesCS6B01G135300 chr2B 91.061 179 12 4 2816 2993 474280886 474281061 4.920000e-59 239.0
36 TraesCS6B01G135300 chr2B 89.362 188 18 2 2814 2999 798983361 798983548 6.360000e-58 235.0
37 TraesCS6B01G135300 chr2B 90.055 181 16 2 2814 2993 772833080 772833259 2.290000e-57 233.0
38 TraesCS6B01G135300 chr2B 89.444 180 18 1 2814 2993 650478149 650478327 3.830000e-55 226.0
39 TraesCS6B01G135300 chr7B 96.616 591 16 3 3221 3809 470296006 470296594 0.000000e+00 977.0
40 TraesCS6B01G135300 chr7B 96.465 594 18 1 3219 3809 664046777 664047370 0.000000e+00 977.0
41 TraesCS6B01G135300 chr7B 96.121 593 22 1 3218 3809 604311641 604312233 0.000000e+00 966.0
42 TraesCS6B01G135300 chr7B 78.217 785 134 31 1085 1852 671702117 671702881 5.760000e-128 468.0
43 TraesCS6B01G135300 chr7B 77.011 783 147 28 1085 1852 685666792 685667556 5.890000e-113 418.0
44 TraesCS6B01G135300 chr5B 83.175 737 110 10 2012 2735 622605437 622606172 0.000000e+00 662.0
45 TraesCS6B01G135300 chr5B 94.220 173 10 0 3058 3230 680670603 680670431 8.110000e-67 265.0
46 TraesCS6B01G135300 chr5B 94.675 169 9 0 3062 3230 346111482 346111314 2.920000e-66 263.0
47 TraesCS6B01G135300 chr5B 89.730 185 17 2 2813 2995 34558347 34558163 6.360000e-58 235.0
48 TraesCS6B01G135300 chr5B 94.000 50 3 0 539 588 503529017 503528968 4.080000e-10 76.8
49 TraesCS6B01G135300 chr3B 81.569 765 112 20 1986 2725 620454966 620454206 4.210000e-169 604.0
50 TraesCS6B01G135300 chr3B 79.752 805 135 23 1059 1852 620455890 620455103 3.320000e-155 558.0
51 TraesCS6B01G135300 chr3B 94.118 51 3 0 538 588 421670594 421670544 1.130000e-10 78.7
52 TraesCS6B01G135300 chr3A 81.793 736 112 13 2015 2730 609687759 609687026 7.040000e-167 597.0
53 TraesCS6B01G135300 chr3A 80.621 805 128 23 1059 1852 609688715 609687928 7.040000e-167 597.0
54 TraesCS6B01G135300 chr3A 86.765 68 6 3 533 600 750351095 750351031 5.280000e-09 73.1
55 TraesCS6B01G135300 chr3A 89.091 55 5 1 533 587 750341226 750341279 2.460000e-07 67.6
56 TraesCS6B01G135300 chr3D 80.373 805 130 23 1059 1852 466680067 466679280 1.520000e-163 586.0
57 TraesCS6B01G135300 chr3D 81.046 765 116 19 1986 2725 466679143 466678383 1.970000e-162 582.0
58 TraesCS6B01G135300 chr5D 80.597 737 129 10 2012 2735 501096770 501097505 1.200000e-154 556.0
59 TraesCS6B01G135300 chr5D 93.529 170 11 0 3061 3230 382875557 382875388 1.760000e-63 254.0
60 TraesCS6B01G135300 chr5D 90.909 55 4 1 535 588 470466519 470466573 5.280000e-09 73.1
61 TraesCS6B01G135300 chr7A 78.331 743 130 26 1124 1852 682899100 682898375 5.800000e-123 451.0
62 TraesCS6B01G135300 chr7A 77.778 783 141 28 1085 1852 727276696 727277460 5.800000e-123 451.0
63 TraesCS6B01G135300 chr7A 78.062 743 132 27 1124 1852 726605943 726605218 1.260000e-119 440.0
64 TraesCS6B01G135300 chr7A 97.619 42 1 0 545 586 127665997 127665956 5.280000e-09 73.1
65 TraesCS6B01G135300 chr7D 76.761 809 153 29 1060 1852 591814487 591813698 1.640000e-113 420.0
66 TraesCS6B01G135300 chr7D 90.741 54 5 0 535 588 199127612 199127665 5.280000e-09 73.1
67 TraesCS6B01G135300 chr1B 95.906 171 7 0 3060 3230 142521310 142521140 1.040000e-70 278.0
68 TraesCS6B01G135300 chr2A 93.064 173 12 0 3058 3230 88723134 88723306 1.760000e-63 254.0
69 TraesCS6B01G135300 chr2D 95.455 44 2 0 544 587 207207447 207207490 1.900000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G135300 chr6B 132429628 132433436 3808 True 7035.000000 7035 100.000000 1 3809 1 chr6B.!!$R2 3808
1 TraesCS6B01G135300 chr6B 646915192 646915779 587 False 985.000000 985 96.944000 3223 3809 1 chr6B.!!$F1 586
2 TraesCS6B01G135300 chr6A 74905008 74907250 2242 True 1842.000000 3585 93.933500 623 3064 2 chr6A.!!$R2 2441
3 TraesCS6B01G135300 chr6D 58854855 58856861 2006 True 1639.500000 3177 95.120500 874 3060 2 chr6D.!!$R1 2186
4 TraesCS6B01G135300 chr4D 133467914 133470687 2773 False 1240.000000 3133 89.450000 1 2811 3 chr4D.!!$F1 2810
5 TraesCS6B01G135300 chr4A 428163176 428164093 917 True 1448.000000 1448 95.038000 1856 2782 1 chr4A.!!$R1 926
6 TraesCS6B01G135300 chr4A 428259060 428263441 4381 True 628.333333 1378 90.057000 1 1578 3 chr4A.!!$R3 1577
7 TraesCS6B01G135300 chrUn 58377744 58378322 578 False 981.000000 981 97.241000 3230 3809 1 chrUn.!!$F1 579
8 TraesCS6B01G135300 chr5A 125122217 125122795 578 True 981.000000 981 97.237000 3231 3809 1 chr5A.!!$R1 578
9 TraesCS6B01G135300 chr5A 626119209 626119929 720 True 562.000000 562 80.999000 2027 2735 1 chr5A.!!$R2 708
10 TraesCS6B01G135300 chr4B 662087421 662088001 580 False 979.000000 979 97.074000 3229 3809 1 chr4B.!!$F4 580
11 TraesCS6B01G135300 chr4B 161619770 161622442 2672 True 505.333333 688 88.984667 1 2715 3 chr4B.!!$R2 2714
12 TraesCS6B01G135300 chr2B 316103503 316104090 587 True 979.000000 979 96.769000 3224 3809 1 chr2B.!!$R2 585
13 TraesCS6B01G135300 chr2B 118826504 118827090 586 True 972.000000 972 96.599000 3224 3809 1 chr2B.!!$R1 585
14 TraesCS6B01G135300 chr7B 470296006 470296594 588 False 977.000000 977 96.616000 3221 3809 1 chr7B.!!$F1 588
15 TraesCS6B01G135300 chr7B 664046777 664047370 593 False 977.000000 977 96.465000 3219 3809 1 chr7B.!!$F3 590
16 TraesCS6B01G135300 chr7B 604311641 604312233 592 False 966.000000 966 96.121000 3218 3809 1 chr7B.!!$F2 591
17 TraesCS6B01G135300 chr7B 671702117 671702881 764 False 468.000000 468 78.217000 1085 1852 1 chr7B.!!$F4 767
18 TraesCS6B01G135300 chr7B 685666792 685667556 764 False 418.000000 418 77.011000 1085 1852 1 chr7B.!!$F5 767
19 TraesCS6B01G135300 chr5B 622605437 622606172 735 False 662.000000 662 83.175000 2012 2735 1 chr5B.!!$F1 723
20 TraesCS6B01G135300 chr3B 620454206 620455890 1684 True 581.000000 604 80.660500 1059 2725 2 chr3B.!!$R2 1666
21 TraesCS6B01G135300 chr3A 609687026 609688715 1689 True 597.000000 597 81.207000 1059 2730 2 chr3A.!!$R2 1671
22 TraesCS6B01G135300 chr3D 466678383 466680067 1684 True 584.000000 586 80.709500 1059 2725 2 chr3D.!!$R1 1666
23 TraesCS6B01G135300 chr5D 501096770 501097505 735 False 556.000000 556 80.597000 2012 2735 1 chr5D.!!$F2 723
24 TraesCS6B01G135300 chr7A 682898375 682899100 725 True 451.000000 451 78.331000 1124 1852 1 chr7A.!!$R2 728
25 TraesCS6B01G135300 chr7A 727276696 727277460 764 False 451.000000 451 77.778000 1085 1852 1 chr7A.!!$F1 767
26 TraesCS6B01G135300 chr7A 726605218 726605943 725 True 440.000000 440 78.062000 1124 1852 1 chr7A.!!$R3 728
27 TraesCS6B01G135300 chr7D 591813698 591814487 789 True 420.000000 420 76.761000 1060 1852 1 chr7D.!!$R1 792

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
158 168 0.515127 TGAAACTTGTACGCATGCGG 59.485 50.0 39.95 25.5 44.69 5.69 F
405 2032 0.535328 TCTATCGTCTGAGCCCCTCG 60.535 60.0 0.00 0.0 32.35 4.63 F
560 3464 1.031235 GCTACTACTTCCTCCGTCCC 58.969 60.0 0.00 0.0 0.00 4.46 F
1677 5077 1.124702 CGCCTAGACGAAACGACGAC 61.125 60.0 0.00 3.0 37.03 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1677 5077 1.133458 GAAGCAGAAGAAAGCGCCG 59.867 57.895 2.29 0.00 35.48 6.46 R
1902 5308 1.910580 ATGTCGATGTCGGGGGCTTT 61.911 55.000 2.25 0.00 40.29 3.51 R
2457 6624 0.964358 AGAGCGTGGCGTAGTACCTT 60.964 55.000 0.00 0.00 0.00 3.50 R
3003 7188 0.322546 TCCGTGAGTCTAGCAGCTCA 60.323 55.000 0.00 7.19 39.17 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 6.608405 TCCATGAAGATATGTGGCAAAAAGAT 59.392 34.615 0.00 0.00 0.00 2.40
60 61 7.779326 TCCATGAAGATATGTGGCAAAAAGATA 59.221 33.333 0.00 0.00 0.00 1.98
157 167 1.464023 CCTGAAACTTGTACGCATGCG 60.464 52.381 36.79 36.79 46.03 4.73
158 168 0.515127 TGAAACTTGTACGCATGCGG 59.485 50.000 39.95 25.50 44.69 5.69
159 169 0.793104 GAAACTTGTACGCATGCGGC 60.793 55.000 39.95 31.16 44.69 6.53
160 170 1.511318 AAACTTGTACGCATGCGGCA 61.511 50.000 39.95 33.13 45.17 5.69
161 171 1.305219 AACTTGTACGCATGCGGCAT 61.305 50.000 39.95 24.15 45.17 4.40
162 172 1.297819 CTTGTACGCATGCGGCATG 60.298 57.895 39.95 32.93 45.17 4.06
163 173 2.651367 CTTGTACGCATGCGGCATGG 62.651 60.000 39.95 28.40 45.17 3.66
164 174 4.612536 GTACGCATGCGGCATGGC 62.613 66.667 39.95 27.53 45.17 4.40
184 194 2.227388 GCACTTGATTTGGTCCACTCAG 59.773 50.000 0.00 0.00 0.00 3.35
277 299 1.078848 AGCTAGCTGCCAGAAACGG 60.079 57.895 18.57 0.00 44.23 4.44
313 335 3.975168 AACTGTTATAAGGGCGTGAGT 57.025 42.857 0.00 0.00 0.00 3.41
317 339 1.483415 GTTATAAGGGCGTGAGTGGGA 59.517 52.381 0.00 0.00 0.00 4.37
321 343 1.274703 AAGGGCGTGAGTGGGATGAT 61.275 55.000 0.00 0.00 0.00 2.45
331 353 3.776969 TGAGTGGGATGATAAGTGCTTCT 59.223 43.478 0.00 0.00 0.00 2.85
332 354 4.225942 TGAGTGGGATGATAAGTGCTTCTT 59.774 41.667 0.00 0.00 39.89 2.52
402 2029 0.605589 CCATCTATCGTCTGAGCCCC 59.394 60.000 0.00 0.00 0.00 5.80
403 2030 1.626686 CATCTATCGTCTGAGCCCCT 58.373 55.000 0.00 0.00 0.00 4.79
404 2031 1.543802 CATCTATCGTCTGAGCCCCTC 59.456 57.143 0.00 0.00 0.00 4.30
405 2032 0.535328 TCTATCGTCTGAGCCCCTCG 60.535 60.000 0.00 0.00 32.35 4.63
406 2033 2.136196 CTATCGTCTGAGCCCCTCGC 62.136 65.000 0.00 0.00 32.35 5.03
456 2083 6.976088 TCTGCAAATGAGATTTCCGTTTTTA 58.024 32.000 0.00 0.00 0.00 1.52
484 2111 7.397761 ACTGTATCTGCCTCTCTTTACTTACTT 59.602 37.037 0.00 0.00 0.00 2.24
485 2112 8.818622 TGTATCTGCCTCTCTTTACTTACTTA 57.181 34.615 0.00 0.00 0.00 2.24
487 2114 7.719871 ATCTGCCTCTCTTTACTTACTTACA 57.280 36.000 0.00 0.00 0.00 2.41
492 2119 7.981789 TGCCTCTCTTTACTTACTTACATCATG 59.018 37.037 0.00 0.00 0.00 3.07
493 2120 7.439655 GCCTCTCTTTACTTACTTACATCATGG 59.560 40.741 0.00 0.00 0.00 3.66
494 2121 8.696374 CCTCTCTTTACTTACTTACATCATGGA 58.304 37.037 0.00 0.00 0.00 3.41
518 3421 8.037758 GGATAGAAGATTATCGGACATGTGAAT 58.962 37.037 1.15 0.00 32.05 2.57
535 3439 7.233962 ACATGTGAATGCATTTGGTATGGATAT 59.766 33.333 14.33 0.00 29.82 1.63
536 3440 6.983984 TGTGAATGCATTTGGTATGGATATG 58.016 36.000 14.33 0.00 29.82 1.78
538 3442 7.452189 TGTGAATGCATTTGGTATGGATATGAT 59.548 33.333 14.33 0.00 29.82 2.45
540 3444 9.531158 TGAATGCATTTGGTATGGATATGATTA 57.469 29.630 14.33 0.00 29.82 1.75
542 3446 7.395190 TGCATTTGGTATGGATATGATTAGC 57.605 36.000 0.00 0.00 0.00 3.09
543 3447 7.177184 TGCATTTGGTATGGATATGATTAGCT 58.823 34.615 0.00 0.00 0.00 3.32
544 3448 8.328014 TGCATTTGGTATGGATATGATTAGCTA 58.672 33.333 0.00 0.00 0.00 3.32
545 3449 8.616076 GCATTTGGTATGGATATGATTAGCTAC 58.384 37.037 0.00 0.00 0.00 3.58
546 3450 9.896645 CATTTGGTATGGATATGATTAGCTACT 57.103 33.333 0.00 0.00 0.00 2.57
549 3453 9.769677 TTGGTATGGATATGATTAGCTACTACT 57.230 33.333 0.00 0.00 0.00 2.57
550 3454 9.769677 TGGTATGGATATGATTAGCTACTACTT 57.230 33.333 0.00 0.00 0.00 2.24
554 3458 8.582657 TGGATATGATTAGCTACTACTTCCTC 57.417 38.462 0.00 0.00 0.00 3.71
555 3459 7.616150 TGGATATGATTAGCTACTACTTCCTCC 59.384 40.741 0.00 0.00 0.00 4.30
556 3460 5.968528 ATGATTAGCTACTACTTCCTCCG 57.031 43.478 0.00 0.00 0.00 4.63
557 3461 4.789807 TGATTAGCTACTACTTCCTCCGT 58.210 43.478 0.00 0.00 0.00 4.69
558 3462 4.820716 TGATTAGCTACTACTTCCTCCGTC 59.179 45.833 0.00 0.00 0.00 4.79
559 3463 2.055684 AGCTACTACTTCCTCCGTCC 57.944 55.000 0.00 0.00 0.00 4.79
560 3464 1.031235 GCTACTACTTCCTCCGTCCC 58.969 60.000 0.00 0.00 0.00 4.46
561 3465 1.684248 GCTACTACTTCCTCCGTCCCA 60.684 57.143 0.00 0.00 0.00 4.37
562 3466 2.946785 CTACTACTTCCTCCGTCCCAT 58.053 52.381 0.00 0.00 0.00 4.00
563 3467 3.749954 GCTACTACTTCCTCCGTCCCATA 60.750 52.174 0.00 0.00 0.00 2.74
564 3468 3.393426 ACTACTTCCTCCGTCCCATAA 57.607 47.619 0.00 0.00 0.00 1.90
565 3469 3.924922 ACTACTTCCTCCGTCCCATAAT 58.075 45.455 0.00 0.00 0.00 1.28
566 3470 5.070823 ACTACTTCCTCCGTCCCATAATA 57.929 43.478 0.00 0.00 0.00 0.98
567 3471 5.652324 ACTACTTCCTCCGTCCCATAATAT 58.348 41.667 0.00 0.00 0.00 1.28
568 3472 6.797707 ACTACTTCCTCCGTCCCATAATATA 58.202 40.000 0.00 0.00 0.00 0.86
569 3473 7.243824 ACTACTTCCTCCGTCCCATAATATAA 58.756 38.462 0.00 0.00 0.00 0.98
570 3474 6.607004 ACTTCCTCCGTCCCATAATATAAG 57.393 41.667 0.00 0.00 0.00 1.73
571 3475 6.320518 ACTTCCTCCGTCCCATAATATAAGA 58.679 40.000 0.00 0.00 0.00 2.10
572 3476 6.785963 ACTTCCTCCGTCCCATAATATAAGAA 59.214 38.462 0.00 0.00 0.00 2.52
573 3477 6.600882 TCCTCCGTCCCATAATATAAGAAC 57.399 41.667 0.00 0.00 0.00 3.01
574 3478 5.184479 TCCTCCGTCCCATAATATAAGAACG 59.816 44.000 0.00 0.00 0.00 3.95
575 3479 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
576 3480 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
577 3481 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
578 3482 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
579 3483 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
580 3484 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
581 3485 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
593 3497 2.919229 ACGTTTTTGATACTAGCGACCG 59.081 45.455 0.00 0.00 0.00 4.79
634 3538 6.301842 CGTAGTCTCGAGTTACACTGTTTTAC 59.698 42.308 21.20 9.68 0.00 2.01
679 3589 2.901192 TCGTCTCATCCACAAGGGTTTA 59.099 45.455 0.00 0.00 38.11 2.01
680 3590 3.517901 TCGTCTCATCCACAAGGGTTTAT 59.482 43.478 0.00 0.00 38.11 1.40
681 3591 3.623060 CGTCTCATCCACAAGGGTTTATG 59.377 47.826 0.00 0.00 38.11 1.90
682 3592 4.622933 CGTCTCATCCACAAGGGTTTATGA 60.623 45.833 0.00 0.00 38.11 2.15
687 3626 5.887598 TCATCCACAAGGGTTTATGAATGAG 59.112 40.000 0.00 0.00 38.11 2.90
731 3705 2.359975 CCGGCCTCCCACAAAGAC 60.360 66.667 0.00 0.00 0.00 3.01
771 4020 5.723295 AGTTGATTATTGCCATTGTCCAAC 58.277 37.500 0.00 0.00 33.62 3.77
775 4024 2.198827 ATTGCCATTGTCCAACTCGA 57.801 45.000 0.00 0.00 0.00 4.04
855 4220 9.277565 CAGTACGTTCAAATTTCATTAATCTGG 57.722 33.333 0.00 0.00 0.00 3.86
864 4229 7.910441 AATTTCATTAATCTGGCCAAACAAG 57.090 32.000 7.01 0.00 0.00 3.16
869 4234 2.887151 ATCTGGCCAAACAAGCTACT 57.113 45.000 7.01 0.00 0.00 2.57
910 4278 7.285172 TCATCGAATCATCATAACCAAACCAAT 59.715 33.333 0.00 0.00 0.00 3.16
911 4279 7.026631 TCGAATCATCATAACCAAACCAATC 57.973 36.000 0.00 0.00 0.00 2.67
912 4280 6.601217 TCGAATCATCATAACCAAACCAATCA 59.399 34.615 0.00 0.00 0.00 2.57
913 4281 7.121907 TCGAATCATCATAACCAAACCAATCAA 59.878 33.333 0.00 0.00 0.00 2.57
937 4306 4.836455 ACATTTCATGTGAATCATACGCG 58.164 39.130 3.53 3.53 43.01 6.01
975 4344 4.189188 CGTACGTGCGGAGGAGGG 62.189 72.222 18.81 0.00 38.27 4.30
1560 4934 4.301027 GCCATCTACGGCGGGGAG 62.301 72.222 13.24 5.55 43.52 4.30
1677 5077 1.124702 CGCCTAGACGAAACGACGAC 61.125 60.000 0.00 3.00 37.03 4.34
1858 5261 1.133976 TCCGGCAGGAGTACTACTACC 60.134 57.143 13.93 13.93 42.75 3.18
1902 5308 4.399395 CAGCAAGAGCCTCCGCCA 62.399 66.667 0.38 0.00 43.56 5.69
1903 5309 3.640407 AGCAAGAGCCTCCGCCAA 61.640 61.111 0.38 0.00 43.56 4.52
2697 6882 1.371558 GTGGAGGACGTGGAGCTTT 59.628 57.895 0.00 0.00 0.00 3.51
2751 6936 4.436998 GTGGCCGTCCAGGAGTCG 62.437 72.222 0.00 0.00 44.48 4.18
2811 6996 1.142474 CGAGTCAACACCGGTAAACC 58.858 55.000 6.87 0.00 0.00 3.27
2812 6997 1.516161 GAGTCAACACCGGTAAACCC 58.484 55.000 6.87 0.00 0.00 4.11
2813 6998 0.109153 AGTCAACACCGGTAAACCCC 59.891 55.000 6.87 0.00 0.00 4.95
2820 7005 3.192796 CGGTAAACCCCGGCAATG 58.807 61.111 0.00 0.00 44.32 2.82
2821 7006 2.889617 GGTAAACCCCGGCAATGC 59.110 61.111 0.00 0.00 0.00 3.56
2822 7007 1.680989 GGTAAACCCCGGCAATGCT 60.681 57.895 4.82 0.00 0.00 3.79
2823 7008 0.394625 GGTAAACCCCGGCAATGCTA 60.395 55.000 4.82 0.00 0.00 3.49
2824 7009 0.736636 GTAAACCCCGGCAATGCTAC 59.263 55.000 4.82 0.00 0.00 3.58
2825 7010 0.328592 TAAACCCCGGCAATGCTACA 59.671 50.000 4.82 0.00 0.00 2.74
2826 7011 1.248101 AAACCCCGGCAATGCTACAC 61.248 55.000 4.82 0.00 0.00 2.90
2827 7012 3.202001 CCCCGGCAATGCTACACG 61.202 66.667 4.82 0.00 0.00 4.49
2828 7013 3.202001 CCCGGCAATGCTACACGG 61.202 66.667 12.56 12.56 43.89 4.94
2830 7015 3.089784 CGGCAATGCTACACGGAC 58.910 61.111 4.82 0.00 0.00 4.79
2831 7016 1.739929 CGGCAATGCTACACGGACA 60.740 57.895 4.82 0.00 0.00 4.02
2832 7017 1.295357 CGGCAATGCTACACGGACAA 61.295 55.000 4.82 0.00 0.00 3.18
2833 7018 0.878416 GGCAATGCTACACGGACAAA 59.122 50.000 4.82 0.00 0.00 2.83
2834 7019 1.401018 GGCAATGCTACACGGACAAAC 60.401 52.381 4.82 0.00 0.00 2.93
2835 7020 1.265635 GCAATGCTACACGGACAAACA 59.734 47.619 0.00 0.00 0.00 2.83
2836 7021 2.665519 GCAATGCTACACGGACAAACAG 60.666 50.000 0.00 0.00 0.00 3.16
2837 7022 2.543777 ATGCTACACGGACAAACAGT 57.456 45.000 0.00 0.00 0.00 3.55
2838 7023 2.319136 TGCTACACGGACAAACAGTT 57.681 45.000 0.00 0.00 0.00 3.16
2839 7024 2.634600 TGCTACACGGACAAACAGTTT 58.365 42.857 0.00 0.00 0.00 2.66
2840 7025 3.794717 TGCTACACGGACAAACAGTTTA 58.205 40.909 0.00 0.00 0.00 2.01
2841 7026 3.556775 TGCTACACGGACAAACAGTTTAC 59.443 43.478 0.00 0.00 0.00 2.01
2842 7027 3.556775 GCTACACGGACAAACAGTTTACA 59.443 43.478 0.00 0.00 0.00 2.41
2843 7028 4.034279 GCTACACGGACAAACAGTTTACAA 59.966 41.667 0.00 0.00 0.00 2.41
2844 7029 5.447548 GCTACACGGACAAACAGTTTACAAA 60.448 40.000 0.00 0.00 0.00 2.83
2845 7030 5.570234 ACACGGACAAACAGTTTACAAAT 57.430 34.783 0.00 0.00 0.00 2.32
2846 7031 5.956642 ACACGGACAAACAGTTTACAAATT 58.043 33.333 0.00 0.00 0.00 1.82
2847 7032 6.391537 ACACGGACAAACAGTTTACAAATTT 58.608 32.000 0.00 0.00 0.00 1.82
2848 7033 6.869388 ACACGGACAAACAGTTTACAAATTTT 59.131 30.769 0.00 0.00 0.00 1.82
2849 7034 7.385478 ACACGGACAAACAGTTTACAAATTTTT 59.615 29.630 0.00 0.00 0.00 1.94
2850 7035 8.861101 CACGGACAAACAGTTTACAAATTTTTA 58.139 29.630 0.00 0.00 0.00 1.52
2851 7036 8.862074 ACGGACAAACAGTTTACAAATTTTTAC 58.138 29.630 0.00 0.00 0.00 2.01
2852 7037 8.861101 CGGACAAACAGTTTACAAATTTTTACA 58.139 29.630 0.00 0.00 0.00 2.41
2855 7040 9.157104 ACAAACAGTTTACAAATTTTTACAGGG 57.843 29.630 0.00 0.00 0.00 4.45
2856 7041 9.157104 CAAACAGTTTACAAATTTTTACAGGGT 57.843 29.630 0.00 0.00 0.00 4.34
2857 7042 8.710835 AACAGTTTACAAATTTTTACAGGGTG 57.289 30.769 0.00 0.00 0.00 4.61
2858 7043 7.269316 ACAGTTTACAAATTTTTACAGGGTGG 58.731 34.615 0.00 0.00 0.00 4.61
2859 7044 6.704050 CAGTTTACAAATTTTTACAGGGTGGG 59.296 38.462 0.00 0.00 0.00 4.61
2860 7045 6.384595 AGTTTACAAATTTTTACAGGGTGGGT 59.615 34.615 0.00 0.00 0.00 4.51
2861 7046 6.809976 TTACAAATTTTTACAGGGTGGGTT 57.190 33.333 0.00 0.00 0.00 4.11
2862 7047 7.909485 TTACAAATTTTTACAGGGTGGGTTA 57.091 32.000 0.00 0.00 0.00 2.85
2863 7048 6.413783 ACAAATTTTTACAGGGTGGGTTAG 57.586 37.500 0.00 0.00 0.00 2.34
2864 7049 5.900699 ACAAATTTTTACAGGGTGGGTTAGT 59.099 36.000 0.00 0.00 0.00 2.24
2865 7050 6.041182 ACAAATTTTTACAGGGTGGGTTAGTC 59.959 38.462 0.00 0.00 0.00 2.59
2866 7051 5.594199 ATTTTTACAGGGTGGGTTAGTCT 57.406 39.130 0.00 0.00 0.00 3.24
2867 7052 5.391577 TTTTTACAGGGTGGGTTAGTCTT 57.608 39.130 0.00 0.00 0.00 3.01
2868 7053 4.628963 TTTACAGGGTGGGTTAGTCTTC 57.371 45.455 0.00 0.00 0.00 2.87
2869 7054 2.112279 ACAGGGTGGGTTAGTCTTCA 57.888 50.000 0.00 0.00 0.00 3.02
2870 7055 2.632537 ACAGGGTGGGTTAGTCTTCAT 58.367 47.619 0.00 0.00 0.00 2.57
2871 7056 2.986728 ACAGGGTGGGTTAGTCTTCATT 59.013 45.455 0.00 0.00 0.00 2.57
2872 7057 3.244911 ACAGGGTGGGTTAGTCTTCATTG 60.245 47.826 0.00 0.00 0.00 2.82
2873 7058 2.308866 AGGGTGGGTTAGTCTTCATTGG 59.691 50.000 0.00 0.00 0.00 3.16
2874 7059 2.092323 GGTGGGTTAGTCTTCATTGGC 58.908 52.381 0.00 0.00 0.00 4.52
2875 7060 2.092323 GTGGGTTAGTCTTCATTGGCC 58.908 52.381 0.00 0.00 0.00 5.36
2876 7061 1.707989 TGGGTTAGTCTTCATTGGCCA 59.292 47.619 0.00 0.00 0.00 5.36
2877 7062 2.109128 TGGGTTAGTCTTCATTGGCCAA 59.891 45.455 23.00 23.00 0.00 4.52
2878 7063 2.492088 GGGTTAGTCTTCATTGGCCAAC 59.508 50.000 23.27 7.75 0.00 3.77
2879 7064 2.492088 GGTTAGTCTTCATTGGCCAACC 59.508 50.000 23.27 10.52 0.00 3.77
2880 7065 2.107950 TAGTCTTCATTGGCCAACCG 57.892 50.000 23.27 15.59 39.70 4.44
2881 7066 0.609131 AGTCTTCATTGGCCAACCGG 60.609 55.000 23.27 13.81 39.70 5.28
2882 7067 0.893727 GTCTTCATTGGCCAACCGGT 60.894 55.000 23.27 0.00 39.70 5.28
2883 7068 0.693622 TCTTCATTGGCCAACCGGTA 59.306 50.000 23.27 6.55 39.70 4.02
2884 7069 1.074084 TCTTCATTGGCCAACCGGTAA 59.926 47.619 23.27 9.72 39.70 2.85
2885 7070 1.472480 CTTCATTGGCCAACCGGTAAG 59.528 52.381 23.27 15.26 39.70 2.34
2886 7071 0.963355 TCATTGGCCAACCGGTAAGC 60.963 55.000 23.27 18.16 39.70 3.09
2887 7072 2.043980 ATTGGCCAACCGGTAAGCG 61.044 57.895 23.27 4.73 39.70 4.68
2888 7073 4.708386 TGGCCAACCGGTAAGCGG 62.708 66.667 19.30 13.65 39.70 5.52
2890 7075 4.397832 GCCAACCGGTAAGCGGGA 62.398 66.667 8.00 0.00 38.34 5.14
2891 7076 2.587889 CCAACCGGTAAGCGGGAT 59.412 61.111 8.00 0.00 38.34 3.85
2892 7077 1.817941 CCAACCGGTAAGCGGGATG 60.818 63.158 8.00 0.00 38.34 3.51
2893 7078 1.219664 CAACCGGTAAGCGGGATGA 59.780 57.895 8.00 0.00 39.23 2.92
2894 7079 1.087771 CAACCGGTAAGCGGGATGAC 61.088 60.000 8.00 0.00 39.23 3.06
2895 7080 2.108362 CCGGTAAGCGGGATGACC 59.892 66.667 0.00 0.00 37.28 4.02
2905 7090 3.324713 GGATGACCCACCTCCCTG 58.675 66.667 0.00 0.00 34.14 4.45
2906 7091 1.306997 GGATGACCCACCTCCCTGA 60.307 63.158 0.00 0.00 34.14 3.86
2907 7092 0.914417 GGATGACCCACCTCCCTGAA 60.914 60.000 0.00 0.00 34.14 3.02
2908 7093 0.991920 GATGACCCACCTCCCTGAAA 59.008 55.000 0.00 0.00 0.00 2.69
2909 7094 1.354368 GATGACCCACCTCCCTGAAAA 59.646 52.381 0.00 0.00 0.00 2.29
2910 7095 1.455822 TGACCCACCTCCCTGAAAAT 58.544 50.000 0.00 0.00 0.00 1.82
2911 7096 2.638325 TGACCCACCTCCCTGAAAATA 58.362 47.619 0.00 0.00 0.00 1.40
2912 7097 2.576191 TGACCCACCTCCCTGAAAATAG 59.424 50.000 0.00 0.00 0.00 1.73
2913 7098 2.576648 GACCCACCTCCCTGAAAATAGT 59.423 50.000 0.00 0.00 0.00 2.12
2914 7099 2.308866 ACCCACCTCCCTGAAAATAGTG 59.691 50.000 0.00 0.00 0.00 2.74
2915 7100 2.357154 CCCACCTCCCTGAAAATAGTGG 60.357 54.545 0.00 0.00 42.33 4.00
2916 7101 2.357154 CCACCTCCCTGAAAATAGTGGG 60.357 54.545 0.00 0.00 39.67 4.61
2917 7102 1.923148 ACCTCCCTGAAAATAGTGGGG 59.077 52.381 0.00 0.00 40.05 4.96
2918 7103 1.215423 CCTCCCTGAAAATAGTGGGGG 59.785 57.143 0.00 0.00 39.87 5.40
2919 7104 2.205342 CTCCCTGAAAATAGTGGGGGA 58.795 52.381 0.00 0.00 42.74 4.81
2920 7105 2.205342 TCCCTGAAAATAGTGGGGGAG 58.795 52.381 0.00 0.00 38.00 4.30
2921 7106 2.205342 CCCTGAAAATAGTGGGGGAGA 58.795 52.381 0.00 0.00 36.17 3.71
2922 7107 2.173569 CCCTGAAAATAGTGGGGGAGAG 59.826 54.545 0.00 0.00 36.17 3.20
2923 7108 2.173569 CCTGAAAATAGTGGGGGAGAGG 59.826 54.545 0.00 0.00 0.00 3.69
2924 7109 2.846827 CTGAAAATAGTGGGGGAGAGGT 59.153 50.000 0.00 0.00 0.00 3.85
2925 7110 3.265489 TGAAAATAGTGGGGGAGAGGTT 58.735 45.455 0.00 0.00 0.00 3.50
2926 7111 3.660669 TGAAAATAGTGGGGGAGAGGTTT 59.339 43.478 0.00 0.00 0.00 3.27
2927 7112 3.739401 AAATAGTGGGGGAGAGGTTTG 57.261 47.619 0.00 0.00 0.00 2.93
2928 7113 2.361085 ATAGTGGGGGAGAGGTTTGT 57.639 50.000 0.00 0.00 0.00 2.83
2929 7114 1.358152 TAGTGGGGGAGAGGTTTGTG 58.642 55.000 0.00 0.00 0.00 3.33
2930 7115 0.401395 AGTGGGGGAGAGGTTTGTGA 60.401 55.000 0.00 0.00 0.00 3.58
2931 7116 0.698818 GTGGGGGAGAGGTTTGTGAT 59.301 55.000 0.00 0.00 0.00 3.06
2932 7117 1.075536 GTGGGGGAGAGGTTTGTGATT 59.924 52.381 0.00 0.00 0.00 2.57
2933 7118 1.075374 TGGGGGAGAGGTTTGTGATTG 59.925 52.381 0.00 0.00 0.00 2.67
2934 7119 1.354368 GGGGGAGAGGTTTGTGATTGA 59.646 52.381 0.00 0.00 0.00 2.57
2935 7120 2.024941 GGGGGAGAGGTTTGTGATTGAT 60.025 50.000 0.00 0.00 0.00 2.57
2936 7121 3.564352 GGGGGAGAGGTTTGTGATTGATT 60.564 47.826 0.00 0.00 0.00 2.57
2937 7122 3.445096 GGGGAGAGGTTTGTGATTGATTG 59.555 47.826 0.00 0.00 0.00 2.67
2938 7123 4.082125 GGGAGAGGTTTGTGATTGATTGT 58.918 43.478 0.00 0.00 0.00 2.71
2939 7124 4.524328 GGGAGAGGTTTGTGATTGATTGTT 59.476 41.667 0.00 0.00 0.00 2.83
2940 7125 5.710099 GGGAGAGGTTTGTGATTGATTGTTA 59.290 40.000 0.00 0.00 0.00 2.41
2941 7126 6.127897 GGGAGAGGTTTGTGATTGATTGTTAG 60.128 42.308 0.00 0.00 0.00 2.34
2942 7127 6.655003 GGAGAGGTTTGTGATTGATTGTTAGA 59.345 38.462 0.00 0.00 0.00 2.10
2943 7128 7.337942 GGAGAGGTTTGTGATTGATTGTTAGAT 59.662 37.037 0.00 0.00 0.00 1.98
2944 7129 8.048534 AGAGGTTTGTGATTGATTGTTAGATG 57.951 34.615 0.00 0.00 0.00 2.90
2945 7130 7.884877 AGAGGTTTGTGATTGATTGTTAGATGA 59.115 33.333 0.00 0.00 0.00 2.92
2946 7131 8.408043 AGGTTTGTGATTGATTGTTAGATGAA 57.592 30.769 0.00 0.00 0.00 2.57
2947 7132 8.859090 AGGTTTGTGATTGATTGTTAGATGAAA 58.141 29.630 0.00 0.00 0.00 2.69
2948 7133 9.474920 GGTTTGTGATTGATTGTTAGATGAAAA 57.525 29.630 0.00 0.00 0.00 2.29
2951 7136 9.681692 TTGTGATTGATTGTTAGATGAAAACAG 57.318 29.630 0.00 0.00 38.05 3.16
2952 7137 8.849168 TGTGATTGATTGTTAGATGAAAACAGT 58.151 29.630 0.00 0.00 38.05 3.55
2953 7138 9.683069 GTGATTGATTGTTAGATGAAAACAGTT 57.317 29.630 0.00 0.00 38.05 3.16
2959 7144 9.612620 GATTGTTAGATGAAAACAGTTTACAGG 57.387 33.333 0.00 0.00 38.05 4.00
2960 7145 6.966021 TGTTAGATGAAAACAGTTTACAGGC 58.034 36.000 0.00 0.00 33.13 4.85
2961 7146 6.770785 TGTTAGATGAAAACAGTTTACAGGCT 59.229 34.615 0.00 0.00 33.13 4.58
2962 7147 7.284489 TGTTAGATGAAAACAGTTTACAGGCTT 59.716 33.333 0.00 0.00 33.13 4.35
2963 7148 6.715347 AGATGAAAACAGTTTACAGGCTTT 57.285 33.333 0.00 0.00 0.00 3.51
2964 7149 7.112452 AGATGAAAACAGTTTACAGGCTTTT 57.888 32.000 0.00 0.00 0.00 2.27
2965 7150 8.232913 AGATGAAAACAGTTTACAGGCTTTTA 57.767 30.769 0.00 0.00 0.00 1.52
2966 7151 8.135529 AGATGAAAACAGTTTACAGGCTTTTAC 58.864 33.333 0.00 0.00 0.00 2.01
2967 7152 7.159322 TGAAAACAGTTTACAGGCTTTTACA 57.841 32.000 0.00 0.00 0.00 2.41
2968 7153 7.603651 TGAAAACAGTTTACAGGCTTTTACAA 58.396 30.769 0.00 0.00 0.00 2.41
2969 7154 8.088981 TGAAAACAGTTTACAGGCTTTTACAAA 58.911 29.630 0.00 0.00 0.00 2.83
2970 7155 9.093970 GAAAACAGTTTACAGGCTTTTACAAAT 57.906 29.630 0.00 0.00 0.00 2.32
2971 7156 8.642908 AAACAGTTTACAGGCTTTTACAAATC 57.357 30.769 0.00 0.00 0.00 2.17
2972 7157 7.582667 ACAGTTTACAGGCTTTTACAAATCT 57.417 32.000 0.00 0.00 0.00 2.40
2973 7158 8.007405 ACAGTTTACAGGCTTTTACAAATCTT 57.993 30.769 0.00 0.00 0.00 2.40
2974 7159 8.474831 ACAGTTTACAGGCTTTTACAAATCTTT 58.525 29.630 0.00 0.00 0.00 2.52
2975 7160 8.755018 CAGTTTACAGGCTTTTACAAATCTTTG 58.245 33.333 1.19 1.19 43.62 2.77
2993 7178 9.643693 AAATCTTTGTATGTCTAGCATTTTTGG 57.356 29.630 5.22 0.00 38.94 3.28
2994 7179 7.156876 TCTTTGTATGTCTAGCATTTTTGGG 57.843 36.000 5.22 0.00 38.94 4.12
2995 7180 6.719370 TCTTTGTATGTCTAGCATTTTTGGGT 59.281 34.615 5.22 0.00 38.94 4.51
2996 7181 7.885922 TCTTTGTATGTCTAGCATTTTTGGGTA 59.114 33.333 5.22 0.00 38.94 3.69
2997 7182 8.410673 TTTGTATGTCTAGCATTTTTGGGTAA 57.589 30.769 5.22 0.00 38.94 2.85
2998 7183 8.410673 TTGTATGTCTAGCATTTTTGGGTAAA 57.589 30.769 5.22 0.00 38.94 2.01
2999 7184 7.822658 TGTATGTCTAGCATTTTTGGGTAAAC 58.177 34.615 5.22 0.00 38.94 2.01
3003 7188 6.266558 TGTCTAGCATTTTTGGGTAAACACAT 59.733 34.615 0.00 0.00 0.00 3.21
3043 7228 0.594602 GGTTTTACGTGGCTTGGTCC 59.405 55.000 0.00 0.00 0.00 4.46
3061 7246 1.209504 TCCCAATTGGCCGAGACTTAG 59.790 52.381 19.75 1.30 0.00 2.18
3068 7253 4.035843 CCGAGACTTAGGCCCAGT 57.964 61.111 4.82 4.82 0.00 4.00
3069 7254 2.287829 CCGAGACTTAGGCCCAGTT 58.712 57.895 6.64 0.00 0.00 3.16
3070 7255 0.175989 CCGAGACTTAGGCCCAGTTC 59.824 60.000 6.64 5.93 0.00 3.01
3071 7256 1.187087 CGAGACTTAGGCCCAGTTCT 58.813 55.000 6.64 0.49 0.00 3.01
3072 7257 1.550976 CGAGACTTAGGCCCAGTTCTT 59.449 52.381 6.64 0.00 0.00 2.52
3073 7258 2.028020 CGAGACTTAGGCCCAGTTCTTT 60.028 50.000 6.64 0.00 0.00 2.52
3074 7259 3.557264 CGAGACTTAGGCCCAGTTCTTTT 60.557 47.826 6.64 0.00 0.00 2.27
3075 7260 4.004314 GAGACTTAGGCCCAGTTCTTTTC 58.996 47.826 6.64 0.00 0.00 2.29
3076 7261 3.394606 AGACTTAGGCCCAGTTCTTTTCA 59.605 43.478 6.64 0.00 0.00 2.69
3077 7262 3.487372 ACTTAGGCCCAGTTCTTTTCAC 58.513 45.455 0.00 0.00 0.00 3.18
3078 7263 3.117663 ACTTAGGCCCAGTTCTTTTCACA 60.118 43.478 0.00 0.00 0.00 3.58
3079 7264 1.692411 AGGCCCAGTTCTTTTCACAC 58.308 50.000 0.00 0.00 0.00 3.82
3080 7265 1.064017 AGGCCCAGTTCTTTTCACACA 60.064 47.619 0.00 0.00 0.00 3.72
3081 7266 1.338020 GGCCCAGTTCTTTTCACACAG 59.662 52.381 0.00 0.00 0.00 3.66
3082 7267 1.338020 GCCCAGTTCTTTTCACACAGG 59.662 52.381 0.00 0.00 0.00 4.00
3083 7268 2.930950 CCCAGTTCTTTTCACACAGGA 58.069 47.619 0.00 0.00 0.00 3.86
3084 7269 3.490348 CCCAGTTCTTTTCACACAGGAT 58.510 45.455 0.00 0.00 0.00 3.24
3085 7270 3.891366 CCCAGTTCTTTTCACACAGGATT 59.109 43.478 0.00 0.00 0.00 3.01
3086 7271 4.022849 CCCAGTTCTTTTCACACAGGATTC 60.023 45.833 0.00 0.00 0.00 2.52
3087 7272 4.823989 CCAGTTCTTTTCACACAGGATTCT 59.176 41.667 0.00 0.00 0.00 2.40
3088 7273 5.278169 CCAGTTCTTTTCACACAGGATTCTG 60.278 44.000 0.00 0.00 46.10 3.02
3089 7274 4.276926 AGTTCTTTTCACACAGGATTCTGC 59.723 41.667 0.00 0.00 44.59 4.26
3090 7275 3.819368 TCTTTTCACACAGGATTCTGCA 58.181 40.909 0.00 0.00 44.59 4.41
3091 7276 3.817084 TCTTTTCACACAGGATTCTGCAG 59.183 43.478 7.63 7.63 44.59 4.41
3092 7277 3.490439 TTTCACACAGGATTCTGCAGA 57.510 42.857 13.74 13.74 44.59 4.26
3093 7278 3.490439 TTCACACAGGATTCTGCAGAA 57.510 42.857 30.23 30.23 44.59 3.02
3094 7279 3.708403 TCACACAGGATTCTGCAGAAT 57.292 42.857 36.15 36.15 46.54 2.40
3106 7291 6.845758 ATTCTGCAGAATCAAGATTTTGGA 57.154 33.333 31.78 6.77 40.49 3.53
3107 7292 6.653526 TTCTGCAGAATCAAGATTTTGGAA 57.346 33.333 25.16 0.00 34.03 3.53
3108 7293 6.653526 TCTGCAGAATCAAGATTTTGGAAA 57.346 33.333 15.67 0.00 34.03 3.13
3109 7294 7.053316 TCTGCAGAATCAAGATTTTGGAAAA 57.947 32.000 15.67 2.08 34.03 2.29
3110 7295 7.673180 TCTGCAGAATCAAGATTTTGGAAAAT 58.327 30.769 15.67 0.00 41.06 1.82
3111 7296 8.152246 TCTGCAGAATCAAGATTTTGGAAAATT 58.848 29.630 15.67 0.00 38.64 1.82
3112 7297 8.314143 TGCAGAATCAAGATTTTGGAAAATTC 57.686 30.769 13.21 0.00 38.64 2.17
3113 7298 8.152246 TGCAGAATCAAGATTTTGGAAAATTCT 58.848 29.630 13.21 5.35 38.64 2.40
3114 7299 8.654215 GCAGAATCAAGATTTTGGAAAATTCTC 58.346 33.333 13.21 2.36 38.64 2.87
3115 7300 9.148104 CAGAATCAAGATTTTGGAAAATTCTCC 57.852 33.333 7.35 0.00 38.64 3.71
3116 7301 8.316946 AGAATCAAGATTTTGGAAAATTCTCCC 58.683 33.333 0.00 0.00 38.64 4.30
3117 7302 6.992664 TCAAGATTTTGGAAAATTCTCCCA 57.007 33.333 0.00 0.00 38.64 4.37
3118 7303 6.996509 TCAAGATTTTGGAAAATTCTCCCAG 58.003 36.000 0.00 0.00 38.64 4.45
3119 7304 6.782000 TCAAGATTTTGGAAAATTCTCCCAGA 59.218 34.615 0.00 0.00 38.64 3.86
3120 7305 7.289782 TCAAGATTTTGGAAAATTCTCCCAGAA 59.710 33.333 0.00 0.00 38.64 3.02
3121 7306 7.803487 AGATTTTGGAAAATTCTCCCAGAAT 57.197 32.000 0.00 2.84 46.22 2.40
3122 7307 7.845037 AGATTTTGGAAAATTCTCCCAGAATC 58.155 34.615 18.80 18.80 43.67 2.52
3123 7308 7.803487 ATTTTGGAAAATTCTCCCAGAATCT 57.197 32.000 0.00 0.00 43.67 2.40
3124 7309 6.594788 TTTGGAAAATTCTCCCAGAATCTG 57.405 37.500 2.68 2.68 43.67 2.90
3125 7310 4.019174 TGGAAAATTCTCCCAGAATCTGC 58.981 43.478 4.40 0.00 43.67 4.26
3126 7311 4.264083 TGGAAAATTCTCCCAGAATCTGCT 60.264 41.667 4.40 0.00 43.67 4.24
3127 7312 4.708909 GGAAAATTCTCCCAGAATCTGCTT 59.291 41.667 4.40 0.00 43.67 3.91
3128 7313 5.163571 GGAAAATTCTCCCAGAATCTGCTTC 60.164 44.000 4.40 2.11 43.67 3.86
3129 7314 4.858965 AATTCTCCCAGAATCTGCTTCT 57.141 40.909 4.40 0.00 43.67 2.85
3130 7315 3.902881 TTCTCCCAGAATCTGCTTCTC 57.097 47.619 4.40 0.00 42.48 2.87
3131 7316 3.113191 TCTCCCAGAATCTGCTTCTCT 57.887 47.619 4.40 0.00 42.48 3.10
3132 7317 3.030291 TCTCCCAGAATCTGCTTCTCTC 58.970 50.000 4.40 0.00 42.48 3.20
3133 7318 2.765135 CTCCCAGAATCTGCTTCTCTCA 59.235 50.000 4.40 0.00 42.48 3.27
3134 7319 2.765135 TCCCAGAATCTGCTTCTCTCAG 59.235 50.000 4.40 0.00 42.48 3.35
3135 7320 2.765135 CCCAGAATCTGCTTCTCTCAGA 59.235 50.000 4.40 0.00 42.48 3.27
3136 7321 3.197333 CCCAGAATCTGCTTCTCTCAGAA 59.803 47.826 4.40 0.00 42.48 3.02
3137 7322 4.141665 CCCAGAATCTGCTTCTCTCAGAAT 60.142 45.833 4.40 0.00 42.48 2.40
3138 7323 5.051816 CCAGAATCTGCTTCTCTCAGAATC 58.948 45.833 4.40 0.00 42.48 2.52
3139 7324 5.163385 CCAGAATCTGCTTCTCTCAGAATCT 60.163 44.000 4.40 5.12 46.23 2.40
3140 7325 5.909477 AGAATCTGCTTCTCTCAGAATCTG 58.091 41.667 3.38 3.38 44.61 2.90
3141 7326 5.422970 AGAATCTGCTTCTCTCAGAATCTGT 59.577 40.000 10.36 0.00 44.61 3.41
3142 7327 5.680594 ATCTGCTTCTCTCAGAATCTGTT 57.319 39.130 10.36 0.00 43.01 3.16
3143 7328 4.818642 TCTGCTTCTCTCAGAATCTGTTG 58.181 43.478 10.36 5.07 37.61 3.33
3144 7329 3.332919 TGCTTCTCTCAGAATCTGTTGC 58.667 45.455 10.36 7.36 33.13 4.17
3145 7330 2.677337 GCTTCTCTCAGAATCTGTTGCC 59.323 50.000 10.36 0.00 33.13 4.52
3146 7331 2.662006 TCTCTCAGAATCTGTTGCCG 57.338 50.000 10.36 0.00 32.61 5.69
3147 7332 2.171003 TCTCTCAGAATCTGTTGCCGA 58.829 47.619 10.36 0.00 32.61 5.54
3148 7333 2.165234 TCTCTCAGAATCTGTTGCCGAG 59.835 50.000 10.36 9.27 32.61 4.63
3149 7334 1.895798 TCTCAGAATCTGTTGCCGAGT 59.104 47.619 10.36 0.00 32.61 4.18
3150 7335 2.300152 TCTCAGAATCTGTTGCCGAGTT 59.700 45.455 10.36 0.00 32.61 3.01
3151 7336 2.670414 CTCAGAATCTGTTGCCGAGTTC 59.330 50.000 10.36 0.00 32.61 3.01
3152 7337 2.300152 TCAGAATCTGTTGCCGAGTTCT 59.700 45.455 10.36 0.00 32.61 3.01
3153 7338 3.070018 CAGAATCTGTTGCCGAGTTCTT 58.930 45.455 1.31 0.00 0.00 2.52
3154 7339 3.499918 CAGAATCTGTTGCCGAGTTCTTT 59.500 43.478 1.31 0.00 0.00 2.52
3155 7340 4.023707 CAGAATCTGTTGCCGAGTTCTTTT 60.024 41.667 1.31 0.00 0.00 2.27
3156 7341 4.214332 AGAATCTGTTGCCGAGTTCTTTTC 59.786 41.667 0.00 0.00 0.00 2.29
3157 7342 3.194005 TCTGTTGCCGAGTTCTTTTCT 57.806 42.857 0.00 0.00 0.00 2.52
3158 7343 3.131396 TCTGTTGCCGAGTTCTTTTCTC 58.869 45.455 0.00 0.00 0.00 2.87
3169 7354 5.480205 GAGTTCTTTTCTCGGATTGTAGGT 58.520 41.667 0.00 0.00 0.00 3.08
3170 7355 5.866207 AGTTCTTTTCTCGGATTGTAGGTT 58.134 37.500 0.00 0.00 0.00 3.50
3171 7356 5.701290 AGTTCTTTTCTCGGATTGTAGGTTG 59.299 40.000 0.00 0.00 0.00 3.77
3172 7357 5.477607 TCTTTTCTCGGATTGTAGGTTGA 57.522 39.130 0.00 0.00 0.00 3.18
3173 7358 5.479306 TCTTTTCTCGGATTGTAGGTTGAG 58.521 41.667 0.00 0.00 0.00 3.02
3174 7359 5.245301 TCTTTTCTCGGATTGTAGGTTGAGA 59.755 40.000 0.00 0.00 0.00 3.27
3175 7360 5.677319 TTTCTCGGATTGTAGGTTGAGAT 57.323 39.130 0.00 0.00 32.98 2.75
3176 7361 5.677319 TTCTCGGATTGTAGGTTGAGATT 57.323 39.130 0.00 0.00 32.98 2.40
3177 7362 5.677319 TCTCGGATTGTAGGTTGAGATTT 57.323 39.130 0.00 0.00 0.00 2.17
3178 7363 5.661458 TCTCGGATTGTAGGTTGAGATTTC 58.339 41.667 0.00 0.00 0.00 2.17
3179 7364 4.430007 TCGGATTGTAGGTTGAGATTTCG 58.570 43.478 0.00 0.00 0.00 3.46
3180 7365 4.158949 TCGGATTGTAGGTTGAGATTTCGA 59.841 41.667 0.00 0.00 0.00 3.71
3181 7366 4.868171 CGGATTGTAGGTTGAGATTTCGAA 59.132 41.667 0.00 0.00 0.00 3.71
3182 7367 5.350365 CGGATTGTAGGTTGAGATTTCGAAA 59.650 40.000 13.91 13.91 0.00 3.46
3183 7368 6.128391 CGGATTGTAGGTTGAGATTTCGAAAA 60.128 38.462 15.66 0.00 0.00 2.29
3184 7369 7.244192 GGATTGTAGGTTGAGATTTCGAAAAG 58.756 38.462 15.66 0.00 0.00 2.27
3185 7370 7.119262 GGATTGTAGGTTGAGATTTCGAAAAGA 59.881 37.037 15.66 0.00 0.00 2.52
3186 7371 7.421530 TTGTAGGTTGAGATTTCGAAAAGAG 57.578 36.000 15.66 0.00 0.00 2.85
3187 7372 6.522054 TGTAGGTTGAGATTTCGAAAAGAGT 58.478 36.000 15.66 0.00 0.00 3.24
3188 7373 6.990349 TGTAGGTTGAGATTTCGAAAAGAGTT 59.010 34.615 15.66 0.00 0.00 3.01
3189 7374 6.305693 AGGTTGAGATTTCGAAAAGAGTTG 57.694 37.500 15.66 0.00 0.00 3.16
3190 7375 5.823045 AGGTTGAGATTTCGAAAAGAGTTGT 59.177 36.000 15.66 0.00 0.00 3.32
3191 7376 5.909610 GGTTGAGATTTCGAAAAGAGTTGTG 59.090 40.000 15.66 0.00 0.00 3.33
3192 7377 6.458342 GGTTGAGATTTCGAAAAGAGTTGTGT 60.458 38.462 15.66 0.00 0.00 3.72
3193 7378 6.048073 TGAGATTTCGAAAAGAGTTGTGTG 57.952 37.500 15.66 0.00 0.00 3.82
3194 7379 4.848757 AGATTTCGAAAAGAGTTGTGTGC 58.151 39.130 15.66 0.00 0.00 4.57
3195 7380 4.576463 AGATTTCGAAAAGAGTTGTGTGCT 59.424 37.500 15.66 0.00 0.00 4.40
3196 7381 3.673746 TTCGAAAAGAGTTGTGTGCTG 57.326 42.857 0.00 0.00 0.00 4.41
3197 7382 2.899976 TCGAAAAGAGTTGTGTGCTGA 58.100 42.857 0.00 0.00 0.00 4.26
3198 7383 3.466836 TCGAAAAGAGTTGTGTGCTGAT 58.533 40.909 0.00 0.00 0.00 2.90
3199 7384 4.627058 TCGAAAAGAGTTGTGTGCTGATA 58.373 39.130 0.00 0.00 0.00 2.15
3200 7385 5.237815 TCGAAAAGAGTTGTGTGCTGATAT 58.762 37.500 0.00 0.00 0.00 1.63
3201 7386 5.120674 TCGAAAAGAGTTGTGTGCTGATATG 59.879 40.000 0.00 0.00 0.00 1.78
3202 7387 5.106948 CGAAAAGAGTTGTGTGCTGATATGT 60.107 40.000 0.00 0.00 0.00 2.29
3203 7388 5.869753 AAAGAGTTGTGTGCTGATATGTC 57.130 39.130 0.00 0.00 0.00 3.06
3204 7389 4.815533 AGAGTTGTGTGCTGATATGTCT 57.184 40.909 0.00 0.00 0.00 3.41
3205 7390 4.502016 AGAGTTGTGTGCTGATATGTCTG 58.498 43.478 0.00 0.00 0.00 3.51
3206 7391 4.020751 AGAGTTGTGTGCTGATATGTCTGT 60.021 41.667 0.00 0.00 0.00 3.41
3207 7392 5.185828 AGAGTTGTGTGCTGATATGTCTGTA 59.814 40.000 0.00 0.00 0.00 2.74
3208 7393 5.414360 AGTTGTGTGCTGATATGTCTGTAG 58.586 41.667 0.00 0.00 0.00 2.74
3209 7394 5.047021 AGTTGTGTGCTGATATGTCTGTAGT 60.047 40.000 0.00 0.00 0.00 2.73
3210 7395 6.152831 AGTTGTGTGCTGATATGTCTGTAGTA 59.847 38.462 0.00 0.00 0.00 1.82
3211 7396 6.715347 TGTGTGCTGATATGTCTGTAGTAT 57.285 37.500 0.00 0.00 0.00 2.12
3212 7397 6.739112 TGTGTGCTGATATGTCTGTAGTATC 58.261 40.000 0.00 0.00 0.00 2.24
3213 7398 6.153067 GTGTGCTGATATGTCTGTAGTATCC 58.847 44.000 0.00 0.00 0.00 2.59
3214 7399 6.015856 GTGTGCTGATATGTCTGTAGTATCCT 60.016 42.308 0.00 0.00 0.00 3.24
3215 7400 6.551227 TGTGCTGATATGTCTGTAGTATCCTT 59.449 38.462 0.00 0.00 0.00 3.36
3216 7401 7.724061 TGTGCTGATATGTCTGTAGTATCCTTA 59.276 37.037 0.00 0.00 0.00 2.69
3217 7402 8.240682 GTGCTGATATGTCTGTAGTATCCTTAG 58.759 40.741 0.00 0.00 0.00 2.18
3218 7403 8.164070 TGCTGATATGTCTGTAGTATCCTTAGA 58.836 37.037 0.00 0.00 0.00 2.10
3219 7404 8.455682 GCTGATATGTCTGTAGTATCCTTAGAC 58.544 40.741 0.00 0.00 35.71 2.59
3220 7405 9.508642 CTGATATGTCTGTAGTATCCTTAGACA 57.491 37.037 7.70 7.70 42.64 3.41
3326 7511 6.589139 CACGTATGAATAGATGACATCAGCAT 59.411 38.462 17.57 14.95 34.14 3.79
3532 7720 5.278758 GGCTTAAACTAAAGTTGCCATGTGA 60.279 40.000 14.54 0.00 41.51 3.58
3674 7862 7.102993 GGCAATTTTAGTTTATGGTTCATGGT 58.897 34.615 0.00 0.00 0.00 3.55
3786 7974 6.343716 TCAGTGTAAACATCATGGCAATTT 57.656 33.333 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.005215 CTTCATGGACTCCAAGGCCTT 59.995 52.381 13.78 13.78 46.32 4.35
139 149 0.515127 CCGCATGCGTACAAGTTTCA 59.485 50.000 35.55 0.00 37.81 2.69
157 167 0.609662 ACCAAATCAAGTGCCATGCC 59.390 50.000 0.00 0.00 0.00 4.40
158 168 1.404583 GGACCAAATCAAGTGCCATGC 60.405 52.381 0.00 0.00 0.00 4.06
159 169 1.894466 TGGACCAAATCAAGTGCCATG 59.106 47.619 0.00 0.00 0.00 3.66
160 170 1.895131 GTGGACCAAATCAAGTGCCAT 59.105 47.619 0.00 0.00 0.00 4.40
161 171 1.133513 AGTGGACCAAATCAAGTGCCA 60.134 47.619 0.00 0.00 0.00 4.92
162 172 1.541588 GAGTGGACCAAATCAAGTGCC 59.458 52.381 0.00 0.00 0.00 5.01
163 173 2.227388 CTGAGTGGACCAAATCAAGTGC 59.773 50.000 10.92 0.00 0.00 4.40
164 174 3.251729 CACTGAGTGGACCAAATCAAGTG 59.748 47.826 4.28 16.88 0.00 3.16
184 194 2.244946 GGCACCTCCGTTTCTTCAC 58.755 57.895 0.00 0.00 0.00 3.18
313 335 4.574674 ACAAGAAGCACTTATCATCCCA 57.425 40.909 0.00 0.00 37.03 4.37
317 339 8.621532 TCAGTAAAACAAGAAGCACTTATCAT 57.378 30.769 0.00 0.00 37.03 2.45
321 343 7.859325 AGTTCAGTAAAACAAGAAGCACTTA 57.141 32.000 0.00 0.00 37.03 2.24
360 1964 2.813754 CAGCAAGAACCATCGGAAAAGA 59.186 45.455 0.00 0.00 0.00 2.52
371 1975 3.126831 CGATAGATGGTCAGCAAGAACC 58.873 50.000 0.00 0.00 39.76 3.62
443 2070 8.068380 GGCAGATACAGTATAAAAACGGAAATC 58.932 37.037 0.00 0.00 0.00 2.17
444 2071 7.773690 AGGCAGATACAGTATAAAAACGGAAAT 59.226 33.333 0.00 0.00 0.00 2.17
456 2083 7.906199 AAGTAAAGAGAGGCAGATACAGTAT 57.094 36.000 0.00 0.00 0.00 2.12
463 2090 7.719871 TGTAAGTAAGTAAAGAGAGGCAGAT 57.280 36.000 0.00 0.00 0.00 2.90
484 2111 8.687242 GTCCGATAATCTTCTATCCATGATGTA 58.313 37.037 0.00 0.00 0.00 2.29
485 2112 7.179160 TGTCCGATAATCTTCTATCCATGATGT 59.821 37.037 0.00 0.00 0.00 3.06
487 2114 7.724490 TGTCCGATAATCTTCTATCCATGAT 57.276 36.000 0.00 0.00 0.00 2.45
492 2119 6.925211 TCACATGTCCGATAATCTTCTATCC 58.075 40.000 0.00 0.00 0.00 2.59
493 2120 8.867935 CATTCACATGTCCGATAATCTTCTATC 58.132 37.037 0.00 0.00 0.00 2.08
494 2121 7.332926 GCATTCACATGTCCGATAATCTTCTAT 59.667 37.037 0.00 0.00 32.28 1.98
505 3408 2.164017 CCAAATGCATTCACATGTCCGA 59.836 45.455 13.38 0.00 32.28 4.55
518 3421 7.177184 AGCTAATCATATCCATACCAAATGCA 58.823 34.615 0.00 0.00 0.00 3.96
535 3439 4.789807 ACGGAGGAAGTAGTAGCTAATCA 58.210 43.478 0.00 0.00 0.00 2.57
536 3440 4.216042 GGACGGAGGAAGTAGTAGCTAATC 59.784 50.000 0.00 0.00 0.00 1.75
538 3442 3.549794 GGACGGAGGAAGTAGTAGCTAA 58.450 50.000 0.00 0.00 0.00 3.09
540 3444 1.409942 GGGACGGAGGAAGTAGTAGCT 60.410 57.143 0.00 0.00 0.00 3.32
541 3445 1.031235 GGGACGGAGGAAGTAGTAGC 58.969 60.000 0.00 0.00 0.00 3.58
542 3446 2.431954 TGGGACGGAGGAAGTAGTAG 57.568 55.000 0.00 0.00 0.00 2.57
543 3447 4.524802 TTATGGGACGGAGGAAGTAGTA 57.475 45.455 0.00 0.00 0.00 1.82
544 3448 3.393426 TTATGGGACGGAGGAAGTAGT 57.607 47.619 0.00 0.00 0.00 2.73
545 3449 7.614583 TCTTATATTATGGGACGGAGGAAGTAG 59.385 40.741 0.00 0.00 0.00 2.57
546 3450 7.472741 TCTTATATTATGGGACGGAGGAAGTA 58.527 38.462 0.00 0.00 0.00 2.24
547 3451 6.320518 TCTTATATTATGGGACGGAGGAAGT 58.679 40.000 0.00 0.00 0.00 3.01
548 3452 6.852420 TCTTATATTATGGGACGGAGGAAG 57.148 41.667 0.00 0.00 0.00 3.46
549 3453 6.294899 CGTTCTTATATTATGGGACGGAGGAA 60.295 42.308 0.00 0.00 0.00 3.36
550 3454 5.184479 CGTTCTTATATTATGGGACGGAGGA 59.816 44.000 0.00 0.00 0.00 3.71
551 3455 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
552 3456 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
553 3457 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
554 3458 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
555 3459 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
564 3468 9.740239 TCGCTAGTATCAAAAACGTTCTTATAT 57.260 29.630 0.00 0.00 0.00 0.86
565 3469 9.013490 GTCGCTAGTATCAAAAACGTTCTTATA 57.987 33.333 0.00 0.00 0.00 0.98
566 3470 7.009907 GGTCGCTAGTATCAAAAACGTTCTTAT 59.990 37.037 0.00 0.00 0.00 1.73
567 3471 6.308766 GGTCGCTAGTATCAAAAACGTTCTTA 59.691 38.462 0.00 0.00 0.00 2.10
568 3472 5.119743 GGTCGCTAGTATCAAAAACGTTCTT 59.880 40.000 0.00 0.00 0.00 2.52
569 3473 4.624452 GGTCGCTAGTATCAAAAACGTTCT 59.376 41.667 0.00 0.00 0.00 3.01
570 3474 4.489841 CGGTCGCTAGTATCAAAAACGTTC 60.490 45.833 0.00 0.00 0.00 3.95
571 3475 3.365820 CGGTCGCTAGTATCAAAAACGTT 59.634 43.478 0.00 0.00 0.00 3.99
572 3476 2.919229 CGGTCGCTAGTATCAAAAACGT 59.081 45.455 0.00 0.00 0.00 3.99
573 3477 2.280708 CCGGTCGCTAGTATCAAAAACG 59.719 50.000 0.00 0.00 0.00 3.60
574 3478 3.061697 CACCGGTCGCTAGTATCAAAAAC 59.938 47.826 2.59 0.00 0.00 2.43
575 3479 3.255725 CACCGGTCGCTAGTATCAAAAA 58.744 45.455 2.59 0.00 0.00 1.94
576 3480 2.231964 ACACCGGTCGCTAGTATCAAAA 59.768 45.455 2.59 0.00 0.00 2.44
577 3481 1.820519 ACACCGGTCGCTAGTATCAAA 59.179 47.619 2.59 0.00 0.00 2.69
578 3482 1.466856 ACACCGGTCGCTAGTATCAA 58.533 50.000 2.59 0.00 0.00 2.57
579 3483 2.330440 TACACCGGTCGCTAGTATCA 57.670 50.000 2.59 0.00 0.00 2.15
580 3484 3.365767 GGATTACACCGGTCGCTAGTATC 60.366 52.174 2.59 3.89 0.00 2.24
581 3485 2.555757 GGATTACACCGGTCGCTAGTAT 59.444 50.000 2.59 0.00 0.00 2.12
582 3486 1.949525 GGATTACACCGGTCGCTAGTA 59.050 52.381 2.59 0.00 0.00 1.82
583 3487 0.743097 GGATTACACCGGTCGCTAGT 59.257 55.000 2.59 0.86 0.00 2.57
584 3488 3.564455 GGATTACACCGGTCGCTAG 57.436 57.895 2.59 0.00 0.00 3.42
593 3497 0.378257 TACGACTCGCGGATTACACC 59.622 55.000 6.13 0.00 46.49 4.16
634 3538 3.000727 GGATGAAAGGTACGGTTCACAG 58.999 50.000 10.93 0.00 39.35 3.66
679 3589 6.406624 GCACCCATGATTTTCTTCTCATTCAT 60.407 38.462 0.00 0.00 29.74 2.57
680 3590 5.105635 GCACCCATGATTTTCTTCTCATTCA 60.106 40.000 0.00 0.00 29.74 2.57
681 3591 5.105635 TGCACCCATGATTTTCTTCTCATTC 60.106 40.000 0.00 0.00 29.74 2.67
682 3592 4.773674 TGCACCCATGATTTTCTTCTCATT 59.226 37.500 0.00 0.00 29.74 2.57
687 3626 3.760684 AGACTGCACCCATGATTTTCTTC 59.239 43.478 0.00 0.00 0.00 2.87
783 4032 8.635983 CGATTTTCGAGCGATTTGATTACTATA 58.364 33.333 0.00 0.00 43.74 1.31
934 4303 3.838795 GTAGAGTTGGTGCGCGCG 61.839 66.667 28.44 28.44 0.00 6.86
935 4304 2.432628 AGTAGAGTTGGTGCGCGC 60.433 61.111 27.26 27.26 0.00 6.86
936 4305 2.730672 GCAGTAGAGTTGGTGCGCG 61.731 63.158 0.00 0.00 0.00 6.86
937 4306 3.169198 GCAGTAGAGTTGGTGCGC 58.831 61.111 0.00 0.00 0.00 6.09
975 4344 5.239525 AGTTAATATTGGCGCCAAGAAGATC 59.760 40.000 41.38 28.92 39.47 2.75
1655 5043 3.245315 CGTTTCGTCTAGGCGGCG 61.245 66.667 18.05 14.90 0.00 6.46
1656 5044 2.157073 GTCGTTTCGTCTAGGCGGC 61.157 63.158 18.05 0.00 0.00 6.53
1657 5045 1.866496 CGTCGTTTCGTCTAGGCGG 60.866 63.158 18.05 0.00 0.00 6.13
1677 5077 1.133458 GAAGCAGAAGAAAGCGCCG 59.867 57.895 2.29 0.00 35.48 6.46
1858 5261 4.380531 TCTCTTTTGTTGAGCCAGTAGTG 58.619 43.478 0.00 0.00 0.00 2.74
1902 5308 1.910580 ATGTCGATGTCGGGGGCTTT 61.911 55.000 2.25 0.00 40.29 3.51
1903 5309 2.367202 ATGTCGATGTCGGGGGCTT 61.367 57.895 2.25 0.00 40.29 4.35
1946 5396 2.021722 GCCACTTGCACGACTTCAA 58.978 52.632 0.00 0.00 40.77 2.69
2457 6624 0.964358 AGAGCGTGGCGTAGTACCTT 60.964 55.000 0.00 0.00 0.00 3.50
2697 6882 2.429610 GGCGTAGATGTCTCCCTTGTAA 59.570 50.000 0.00 0.00 0.00 2.41
2811 6996 3.202001 CCGTGTAGCATTGCCGGG 61.202 66.667 14.07 0.00 35.11 5.73
2812 6997 2.125310 TCCGTGTAGCATTGCCGG 60.125 61.111 15.31 15.31 39.98 6.13
2813 6998 1.295357 TTGTCCGTGTAGCATTGCCG 61.295 55.000 4.70 1.40 0.00 5.69
2814 6999 0.878416 TTTGTCCGTGTAGCATTGCC 59.122 50.000 4.70 0.00 0.00 4.52
2815 7000 1.265635 TGTTTGTCCGTGTAGCATTGC 59.734 47.619 0.00 0.00 0.00 3.56
2816 7001 2.548057 ACTGTTTGTCCGTGTAGCATTG 59.452 45.455 0.00 0.00 0.00 2.82
2817 7002 2.846193 ACTGTTTGTCCGTGTAGCATT 58.154 42.857 0.00 0.00 0.00 3.56
2818 7003 2.543777 ACTGTTTGTCCGTGTAGCAT 57.456 45.000 0.00 0.00 0.00 3.79
2819 7004 2.319136 AACTGTTTGTCCGTGTAGCA 57.681 45.000 0.00 0.00 0.00 3.49
2820 7005 3.556775 TGTAAACTGTTTGTCCGTGTAGC 59.443 43.478 15.69 0.00 0.00 3.58
2821 7006 5.721876 TTGTAAACTGTTTGTCCGTGTAG 57.278 39.130 15.69 0.00 0.00 2.74
2822 7007 6.680874 ATTTGTAAACTGTTTGTCCGTGTA 57.319 33.333 15.69 0.00 0.00 2.90
2823 7008 5.570234 ATTTGTAAACTGTTTGTCCGTGT 57.430 34.783 15.69 0.00 0.00 4.49
2824 7009 6.879188 AAATTTGTAAACTGTTTGTCCGTG 57.121 33.333 15.69 0.00 0.00 4.94
2825 7010 7.892778 AAAAATTTGTAAACTGTTTGTCCGT 57.107 28.000 15.69 0.00 0.00 4.69
2826 7011 8.861101 TGTAAAAATTTGTAAACTGTTTGTCCG 58.139 29.630 15.69 0.00 0.00 4.79
2829 7014 9.157104 CCCTGTAAAAATTTGTAAACTGTTTGT 57.843 29.630 15.69 0.00 0.00 2.83
2830 7015 9.157104 ACCCTGTAAAAATTTGTAAACTGTTTG 57.843 29.630 15.69 0.00 0.00 2.93
2831 7016 9.157104 CACCCTGTAAAAATTTGTAAACTGTTT 57.843 29.630 10.98 10.98 0.00 2.83
2832 7017 7.766738 CCACCCTGTAAAAATTTGTAAACTGTT 59.233 33.333 0.00 0.00 0.00 3.16
2833 7018 7.269316 CCACCCTGTAAAAATTTGTAAACTGT 58.731 34.615 0.00 0.00 0.00 3.55
2834 7019 6.704050 CCCACCCTGTAAAAATTTGTAAACTG 59.296 38.462 0.00 0.00 0.00 3.16
2835 7020 6.384595 ACCCACCCTGTAAAAATTTGTAAACT 59.615 34.615 0.00 0.00 0.00 2.66
2836 7021 6.584488 ACCCACCCTGTAAAAATTTGTAAAC 58.416 36.000 0.00 0.00 0.00 2.01
2837 7022 6.809976 ACCCACCCTGTAAAAATTTGTAAA 57.190 33.333 0.00 0.00 0.00 2.01
2838 7023 6.809976 AACCCACCCTGTAAAAATTTGTAA 57.190 33.333 0.00 0.00 0.00 2.41
2839 7024 7.068061 ACTAACCCACCCTGTAAAAATTTGTA 58.932 34.615 0.00 0.00 0.00 2.41
2840 7025 5.900699 ACTAACCCACCCTGTAAAAATTTGT 59.099 36.000 0.00 0.00 0.00 2.83
2841 7026 6.266786 AGACTAACCCACCCTGTAAAAATTTG 59.733 38.462 0.00 0.00 0.00 2.32
2842 7027 6.378745 AGACTAACCCACCCTGTAAAAATTT 58.621 36.000 0.00 0.00 0.00 1.82
2843 7028 5.960704 AGACTAACCCACCCTGTAAAAATT 58.039 37.500 0.00 0.00 0.00 1.82
2844 7029 5.594199 AGACTAACCCACCCTGTAAAAAT 57.406 39.130 0.00 0.00 0.00 1.82
2845 7030 5.104024 TGAAGACTAACCCACCCTGTAAAAA 60.104 40.000 0.00 0.00 0.00 1.94
2846 7031 4.412858 TGAAGACTAACCCACCCTGTAAAA 59.587 41.667 0.00 0.00 0.00 1.52
2847 7032 3.975312 TGAAGACTAACCCACCCTGTAAA 59.025 43.478 0.00 0.00 0.00 2.01
2848 7033 3.589641 TGAAGACTAACCCACCCTGTAA 58.410 45.455 0.00 0.00 0.00 2.41
2849 7034 3.263369 TGAAGACTAACCCACCCTGTA 57.737 47.619 0.00 0.00 0.00 2.74
2850 7035 2.112279 TGAAGACTAACCCACCCTGT 57.888 50.000 0.00 0.00 0.00 4.00
2851 7036 3.347216 CAATGAAGACTAACCCACCCTG 58.653 50.000 0.00 0.00 0.00 4.45
2852 7037 2.308866 CCAATGAAGACTAACCCACCCT 59.691 50.000 0.00 0.00 0.00 4.34
2853 7038 2.723273 CCAATGAAGACTAACCCACCC 58.277 52.381 0.00 0.00 0.00 4.61
2854 7039 2.092323 GCCAATGAAGACTAACCCACC 58.908 52.381 0.00 0.00 0.00 4.61
2855 7040 2.092323 GGCCAATGAAGACTAACCCAC 58.908 52.381 0.00 0.00 0.00 4.61
2856 7041 1.707989 TGGCCAATGAAGACTAACCCA 59.292 47.619 0.61 0.00 0.00 4.51
2857 7042 2.492088 GTTGGCCAATGAAGACTAACCC 59.508 50.000 23.66 0.00 0.00 4.11
2858 7043 2.492088 GGTTGGCCAATGAAGACTAACC 59.508 50.000 23.66 11.02 34.09 2.85
2859 7044 2.161609 CGGTTGGCCAATGAAGACTAAC 59.838 50.000 23.66 4.72 34.09 2.34
2860 7045 2.432444 CGGTTGGCCAATGAAGACTAA 58.568 47.619 23.66 0.00 34.09 2.24
2861 7046 1.339631 CCGGTTGGCCAATGAAGACTA 60.340 52.381 23.66 0.00 34.09 2.59
2862 7047 0.609131 CCGGTTGGCCAATGAAGACT 60.609 55.000 23.66 0.00 34.09 3.24
2863 7048 0.893727 ACCGGTTGGCCAATGAAGAC 60.894 55.000 23.66 8.10 39.70 3.01
2864 7049 0.693622 TACCGGTTGGCCAATGAAGA 59.306 50.000 23.66 4.78 39.70 2.87
2865 7050 1.472480 CTTACCGGTTGGCCAATGAAG 59.528 52.381 23.66 15.73 39.70 3.02
2866 7051 1.540267 CTTACCGGTTGGCCAATGAA 58.460 50.000 23.66 10.42 39.70 2.57
2867 7052 0.963355 GCTTACCGGTTGGCCAATGA 60.963 55.000 23.66 0.73 39.70 2.57
2868 7053 1.510844 GCTTACCGGTTGGCCAATG 59.489 57.895 23.66 17.14 39.70 2.82
2869 7054 2.043980 CGCTTACCGGTTGGCCAAT 61.044 57.895 23.66 8.15 39.70 3.16
2870 7055 2.670251 CGCTTACCGGTTGGCCAA 60.670 61.111 16.05 16.05 39.70 4.52
2879 7064 2.108362 GGGTCATCCCGCTTACCG 59.892 66.667 0.00 0.00 44.74 4.02
2888 7073 0.914417 TTCAGGGAGGTGGGTCATCC 60.914 60.000 0.00 0.00 45.23 3.51
2889 7074 0.991920 TTTCAGGGAGGTGGGTCATC 59.008 55.000 0.00 0.00 0.00 2.92
2890 7075 1.455822 TTTTCAGGGAGGTGGGTCAT 58.544 50.000 0.00 0.00 0.00 3.06
2891 7076 1.455822 ATTTTCAGGGAGGTGGGTCA 58.544 50.000 0.00 0.00 0.00 4.02
2892 7077 2.576648 ACTATTTTCAGGGAGGTGGGTC 59.423 50.000 0.00 0.00 0.00 4.46
2893 7078 2.308866 CACTATTTTCAGGGAGGTGGGT 59.691 50.000 0.00 0.00 0.00 4.51
2894 7079 2.357154 CCACTATTTTCAGGGAGGTGGG 60.357 54.545 0.00 0.00 39.03 4.61
2895 7080 2.357154 CCCACTATTTTCAGGGAGGTGG 60.357 54.545 0.00 0.00 44.30 4.61
2896 7081 2.357154 CCCCACTATTTTCAGGGAGGTG 60.357 54.545 0.00 0.00 44.30 4.00
2897 7082 1.923148 CCCCACTATTTTCAGGGAGGT 59.077 52.381 0.00 0.00 44.30 3.85
2898 7083 1.215423 CCCCCACTATTTTCAGGGAGG 59.785 57.143 0.00 0.00 44.30 4.30
2899 7084 2.205342 TCCCCCACTATTTTCAGGGAG 58.795 52.381 0.00 0.00 44.30 4.30
2900 7085 2.205342 CTCCCCCACTATTTTCAGGGA 58.795 52.381 0.00 0.00 44.30 4.20
2901 7086 2.173569 CTCTCCCCCACTATTTTCAGGG 59.826 54.545 0.00 0.00 41.12 4.45
2902 7087 2.173569 CCTCTCCCCCACTATTTTCAGG 59.826 54.545 0.00 0.00 0.00 3.86
2903 7088 2.846827 ACCTCTCCCCCACTATTTTCAG 59.153 50.000 0.00 0.00 0.00 3.02
2904 7089 2.929301 ACCTCTCCCCCACTATTTTCA 58.071 47.619 0.00 0.00 0.00 2.69
2905 7090 4.017126 CAAACCTCTCCCCCACTATTTTC 58.983 47.826 0.00 0.00 0.00 2.29
2906 7091 3.401342 ACAAACCTCTCCCCCACTATTTT 59.599 43.478 0.00 0.00 0.00 1.82
2907 7092 2.993863 ACAAACCTCTCCCCCACTATTT 59.006 45.455 0.00 0.00 0.00 1.40
2908 7093 2.308866 CACAAACCTCTCCCCCACTATT 59.691 50.000 0.00 0.00 0.00 1.73
2909 7094 1.916181 CACAAACCTCTCCCCCACTAT 59.084 52.381 0.00 0.00 0.00 2.12
2910 7095 1.132657 TCACAAACCTCTCCCCCACTA 60.133 52.381 0.00 0.00 0.00 2.74
2911 7096 0.401395 TCACAAACCTCTCCCCCACT 60.401 55.000 0.00 0.00 0.00 4.00
2912 7097 0.698818 ATCACAAACCTCTCCCCCAC 59.301 55.000 0.00 0.00 0.00 4.61
2913 7098 1.075374 CAATCACAAACCTCTCCCCCA 59.925 52.381 0.00 0.00 0.00 4.96
2914 7099 1.354368 TCAATCACAAACCTCTCCCCC 59.646 52.381 0.00 0.00 0.00 5.40
2915 7100 2.879103 TCAATCACAAACCTCTCCCC 57.121 50.000 0.00 0.00 0.00 4.81
2916 7101 4.082125 ACAATCAATCACAAACCTCTCCC 58.918 43.478 0.00 0.00 0.00 4.30
2917 7102 5.712152 AACAATCAATCACAAACCTCTCC 57.288 39.130 0.00 0.00 0.00 3.71
2918 7103 7.672983 TCTAACAATCAATCACAAACCTCTC 57.327 36.000 0.00 0.00 0.00 3.20
2919 7104 7.884877 TCATCTAACAATCAATCACAAACCTCT 59.115 33.333 0.00 0.00 0.00 3.69
2920 7105 8.044060 TCATCTAACAATCAATCACAAACCTC 57.956 34.615 0.00 0.00 0.00 3.85
2921 7106 8.408043 TTCATCTAACAATCAATCACAAACCT 57.592 30.769 0.00 0.00 0.00 3.50
2922 7107 9.474920 TTTTCATCTAACAATCAATCACAAACC 57.525 29.630 0.00 0.00 0.00 3.27
2925 7110 9.681692 CTGTTTTCATCTAACAATCAATCACAA 57.318 29.630 0.00 0.00 35.28 3.33
2926 7111 8.849168 ACTGTTTTCATCTAACAATCAATCACA 58.151 29.630 0.00 0.00 35.28 3.58
2927 7112 9.683069 AACTGTTTTCATCTAACAATCAATCAC 57.317 29.630 0.00 0.00 35.28 3.06
2933 7118 9.612620 CCTGTAAACTGTTTTCATCTAACAATC 57.387 33.333 11.48 0.00 35.28 2.67
2934 7119 8.082242 GCCTGTAAACTGTTTTCATCTAACAAT 58.918 33.333 11.48 0.00 35.28 2.71
2935 7120 7.284489 AGCCTGTAAACTGTTTTCATCTAACAA 59.716 33.333 11.48 0.00 35.28 2.83
2936 7121 6.770785 AGCCTGTAAACTGTTTTCATCTAACA 59.229 34.615 11.48 6.82 34.55 2.41
2937 7122 7.203255 AGCCTGTAAACTGTTTTCATCTAAC 57.797 36.000 11.48 2.37 0.00 2.34
2938 7123 7.817418 AAGCCTGTAAACTGTTTTCATCTAA 57.183 32.000 11.48 0.00 0.00 2.10
2939 7124 7.817418 AAAGCCTGTAAACTGTTTTCATCTA 57.183 32.000 11.48 0.00 0.00 1.98
2940 7125 6.715347 AAAGCCTGTAAACTGTTTTCATCT 57.285 33.333 11.48 9.36 0.00 2.90
2941 7126 7.918562 TGTAAAAGCCTGTAAACTGTTTTCATC 59.081 33.333 11.48 7.45 0.00 2.92
2942 7127 7.777095 TGTAAAAGCCTGTAAACTGTTTTCAT 58.223 30.769 11.48 0.00 0.00 2.57
2943 7128 7.159322 TGTAAAAGCCTGTAAACTGTTTTCA 57.841 32.000 11.48 11.38 0.00 2.69
2944 7129 8.468720 TTTGTAAAAGCCTGTAAACTGTTTTC 57.531 30.769 11.48 7.02 0.00 2.29
2945 7130 9.093970 GATTTGTAAAAGCCTGTAAACTGTTTT 57.906 29.630 11.48 0.00 0.00 2.43
2946 7131 8.474831 AGATTTGTAAAAGCCTGTAAACTGTTT 58.525 29.630 10.98 10.98 0.00 2.83
2947 7132 8.007405 AGATTTGTAAAAGCCTGTAAACTGTT 57.993 30.769 0.00 0.00 0.00 3.16
2948 7133 7.582667 AGATTTGTAAAAGCCTGTAAACTGT 57.417 32.000 0.00 0.00 0.00 3.55
2949 7134 8.755018 CAAAGATTTGTAAAAGCCTGTAAACTG 58.245 33.333 0.00 0.00 33.59 3.16
2950 7135 8.871686 CAAAGATTTGTAAAAGCCTGTAAACT 57.128 30.769 0.00 0.00 33.59 2.66
2967 7152 9.643693 CCAAAAATGCTAGACATACAAAGATTT 57.356 29.630 0.00 0.00 38.34 2.17
2968 7153 8.253113 CCCAAAAATGCTAGACATACAAAGATT 58.747 33.333 0.00 0.00 38.34 2.40
2969 7154 7.397192 ACCCAAAAATGCTAGACATACAAAGAT 59.603 33.333 0.00 0.00 38.34 2.40
2970 7155 6.719370 ACCCAAAAATGCTAGACATACAAAGA 59.281 34.615 0.00 0.00 38.34 2.52
2971 7156 6.924111 ACCCAAAAATGCTAGACATACAAAG 58.076 36.000 0.00 0.00 38.34 2.77
2972 7157 6.909550 ACCCAAAAATGCTAGACATACAAA 57.090 33.333 0.00 0.00 38.34 2.83
2973 7158 8.301002 GTTTACCCAAAAATGCTAGACATACAA 58.699 33.333 0.00 0.00 38.34 2.41
2974 7159 7.448777 TGTTTACCCAAAAATGCTAGACATACA 59.551 33.333 0.00 0.00 38.34 2.29
2975 7160 7.753580 GTGTTTACCCAAAAATGCTAGACATAC 59.246 37.037 0.00 0.00 38.34 2.39
2976 7161 7.448777 TGTGTTTACCCAAAAATGCTAGACATA 59.551 33.333 0.00 0.00 38.34 2.29
2977 7162 6.266558 TGTGTTTACCCAAAAATGCTAGACAT 59.733 34.615 0.00 0.00 42.30 3.06
2978 7163 5.594725 TGTGTTTACCCAAAAATGCTAGACA 59.405 36.000 0.00 0.00 0.00 3.41
2979 7164 6.079424 TGTGTTTACCCAAAAATGCTAGAC 57.921 37.500 0.00 0.00 0.00 2.59
2980 7165 6.491745 TCATGTGTTTACCCAAAAATGCTAGA 59.508 34.615 0.00 0.00 0.00 2.43
2981 7166 6.686630 TCATGTGTTTACCCAAAAATGCTAG 58.313 36.000 0.00 0.00 0.00 3.42
2982 7167 6.656632 TCATGTGTTTACCCAAAAATGCTA 57.343 33.333 0.00 0.00 0.00 3.49
2983 7168 5.540911 CTCATGTGTTTACCCAAAAATGCT 58.459 37.500 0.00 0.00 0.00 3.79
2984 7169 4.152223 GCTCATGTGTTTACCCAAAAATGC 59.848 41.667 0.00 0.00 0.00 3.56
2985 7170 5.406175 CAGCTCATGTGTTTACCCAAAAATG 59.594 40.000 0.00 0.00 0.00 2.32
2986 7171 5.540911 CAGCTCATGTGTTTACCCAAAAAT 58.459 37.500 0.00 0.00 0.00 1.82
2987 7172 4.739137 GCAGCTCATGTGTTTACCCAAAAA 60.739 41.667 0.00 0.00 0.00 1.94
2988 7173 3.243704 GCAGCTCATGTGTTTACCCAAAA 60.244 43.478 0.00 0.00 0.00 2.44
2989 7174 2.295909 GCAGCTCATGTGTTTACCCAAA 59.704 45.455 0.00 0.00 0.00 3.28
2990 7175 1.885887 GCAGCTCATGTGTTTACCCAA 59.114 47.619 0.00 0.00 0.00 4.12
2991 7176 1.073763 AGCAGCTCATGTGTTTACCCA 59.926 47.619 0.00 0.00 0.00 4.51
2992 7177 1.826385 AGCAGCTCATGTGTTTACCC 58.174 50.000 0.00 0.00 0.00 3.69
2993 7178 3.619038 GTCTAGCAGCTCATGTGTTTACC 59.381 47.826 0.00 0.00 0.00 2.85
2994 7179 4.499183 AGTCTAGCAGCTCATGTGTTTAC 58.501 43.478 0.00 0.00 0.00 2.01
2995 7180 4.220602 TGAGTCTAGCAGCTCATGTGTTTA 59.779 41.667 0.00 0.00 36.89 2.01
2996 7181 3.007290 TGAGTCTAGCAGCTCATGTGTTT 59.993 43.478 0.00 0.00 36.89 2.83
2997 7182 2.564504 TGAGTCTAGCAGCTCATGTGTT 59.435 45.455 0.00 0.00 36.89 3.32
2998 7183 2.094286 GTGAGTCTAGCAGCTCATGTGT 60.094 50.000 0.00 0.00 42.72 3.72
2999 7184 2.538437 GTGAGTCTAGCAGCTCATGTG 58.462 52.381 0.00 0.00 42.72 3.21
3003 7188 0.322546 TCCGTGAGTCTAGCAGCTCA 60.323 55.000 0.00 7.19 39.17 4.26
3038 7223 2.227757 TCTCGGCCAATTGGGACCA 61.228 57.895 25.73 9.21 44.62 4.02
3043 7228 1.668419 CCTAAGTCTCGGCCAATTGG 58.332 55.000 20.81 20.81 38.53 3.16
3061 7246 1.338020 CTGTGTGAAAAGAACTGGGCC 59.662 52.381 0.00 0.00 0.00 5.80
3064 7249 4.823989 AGAATCCTGTGTGAAAAGAACTGG 59.176 41.667 0.00 0.00 35.03 4.00
3065 7250 5.755813 CAGAATCCTGTGTGAAAAGAACTG 58.244 41.667 0.00 0.00 35.70 3.16
3066 7251 4.276926 GCAGAATCCTGTGTGAAAAGAACT 59.723 41.667 0.00 0.00 42.35 3.01
3067 7252 4.036734 TGCAGAATCCTGTGTGAAAAGAAC 59.963 41.667 0.00 0.00 42.35 3.01
3068 7253 4.206375 TGCAGAATCCTGTGTGAAAAGAA 58.794 39.130 0.00 0.00 42.35 2.52
3069 7254 3.817084 CTGCAGAATCCTGTGTGAAAAGA 59.183 43.478 8.42 0.00 42.35 2.52
3070 7255 3.817084 TCTGCAGAATCCTGTGTGAAAAG 59.183 43.478 15.67 0.00 42.35 2.27
3071 7256 3.819368 TCTGCAGAATCCTGTGTGAAAA 58.181 40.909 15.67 0.00 42.35 2.29
3072 7257 3.490439 TCTGCAGAATCCTGTGTGAAA 57.510 42.857 15.67 0.00 42.35 2.69
3073 7258 3.490439 TTCTGCAGAATCCTGTGTGAA 57.510 42.857 25.16 0.00 42.35 3.18
3074 7259 3.708403 ATTCTGCAGAATCCTGTGTGA 57.292 42.857 31.78 7.97 40.49 3.58
3083 7268 6.845758 TCCAAAATCTTGATTCTGCAGAAT 57.154 33.333 36.15 36.15 46.54 2.40
3084 7269 6.653526 TTCCAAAATCTTGATTCTGCAGAA 57.346 33.333 30.23 30.23 38.56 3.02
3085 7270 6.653526 TTTCCAAAATCTTGATTCTGCAGA 57.346 33.333 13.74 13.74 34.14 4.26
3086 7271 7.900782 ATTTTCCAAAATCTTGATTCTGCAG 57.099 32.000 7.63 7.63 33.54 4.41
3087 7272 8.152246 AGAATTTTCCAAAATCTTGATTCTGCA 58.848 29.630 0.00 0.00 37.62 4.41
3088 7273 8.543862 AGAATTTTCCAAAATCTTGATTCTGC 57.456 30.769 0.00 0.00 37.62 4.26
3089 7274 9.148104 GGAGAATTTTCCAAAATCTTGATTCTG 57.852 33.333 10.11 0.00 37.62 3.02
3090 7275 8.316946 GGGAGAATTTTCCAAAATCTTGATTCT 58.683 33.333 16.35 0.00 37.62 2.40
3091 7276 8.096414 TGGGAGAATTTTCCAAAATCTTGATTC 58.904 33.333 16.35 0.00 37.62 2.52
3092 7277 7.976712 TGGGAGAATTTTCCAAAATCTTGATT 58.023 30.769 16.35 0.00 37.62 2.57
3093 7278 7.455638 TCTGGGAGAATTTTCCAAAATCTTGAT 59.544 33.333 16.35 0.00 37.62 2.57
3094 7279 6.782000 TCTGGGAGAATTTTCCAAAATCTTGA 59.218 34.615 16.35 0.00 37.62 3.02
3095 7280 6.996509 TCTGGGAGAATTTTCCAAAATCTTG 58.003 36.000 16.35 0.00 37.62 3.02
3096 7281 7.616528 TTCTGGGAGAATTTTCCAAAATCTT 57.383 32.000 16.35 0.00 37.62 2.40
3097 7282 7.677319 AGATTCTGGGAGAATTTTCCAAAATCT 59.323 33.333 21.03 21.03 44.41 2.40
3098 7283 7.763071 CAGATTCTGGGAGAATTTTCCAAAATC 59.237 37.037 16.35 17.78 44.41 2.17
3099 7284 7.618137 CAGATTCTGGGAGAATTTTCCAAAAT 58.382 34.615 16.35 11.52 44.41 1.82
3100 7285 6.518875 GCAGATTCTGGGAGAATTTTCCAAAA 60.519 38.462 16.35 7.66 44.41 2.44
3101 7286 5.047092 GCAGATTCTGGGAGAATTTTCCAAA 60.047 40.000 16.35 7.97 44.41 3.28
3102 7287 4.463891 GCAGATTCTGGGAGAATTTTCCAA 59.536 41.667 16.35 4.63 44.41 3.53
3103 7288 4.019174 GCAGATTCTGGGAGAATTTTCCA 58.981 43.478 16.35 6.32 44.41 3.53
3104 7289 4.276642 AGCAGATTCTGGGAGAATTTTCC 58.723 43.478 15.28 6.47 44.41 3.13
3105 7290 5.651576 AGAAGCAGATTCTGGGAGAATTTTC 59.348 40.000 15.28 4.04 46.80 2.29
3106 7291 5.578073 AGAAGCAGATTCTGGGAGAATTTT 58.422 37.500 15.28 0.00 46.80 1.82
3107 7292 5.190357 AGAAGCAGATTCTGGGAGAATTT 57.810 39.130 15.28 0.00 46.80 1.82
3108 7293 4.858965 AGAAGCAGATTCTGGGAGAATT 57.141 40.909 15.28 0.00 46.80 2.17
3117 7302 5.422970 ACAGATTCTGAGAGAAGCAGATTCT 59.577 40.000 20.33 0.00 46.11 2.40
3118 7303 5.663456 ACAGATTCTGAGAGAAGCAGATTC 58.337 41.667 20.33 0.00 42.67 2.52
3119 7304 5.680594 ACAGATTCTGAGAGAAGCAGATT 57.319 39.130 20.33 0.00 42.67 2.40
3120 7305 5.421277 CAACAGATTCTGAGAGAAGCAGAT 58.579 41.667 20.33 0.00 42.67 2.90
3121 7306 4.818642 CAACAGATTCTGAGAGAAGCAGA 58.181 43.478 20.33 0.00 42.67 4.26
3122 7307 3.371591 GCAACAGATTCTGAGAGAAGCAG 59.628 47.826 20.33 0.00 42.67 4.24
3123 7308 3.332919 GCAACAGATTCTGAGAGAAGCA 58.667 45.455 20.33 0.00 42.67 3.91
3124 7309 2.677337 GGCAACAGATTCTGAGAGAAGC 59.323 50.000 20.33 12.57 40.68 3.86
3125 7310 2.928757 CGGCAACAGATTCTGAGAGAAG 59.071 50.000 20.33 3.57 37.69 2.85
3126 7311 2.562738 TCGGCAACAGATTCTGAGAGAA 59.437 45.455 20.33 0.00 38.78 2.87
3127 7312 2.165234 CTCGGCAACAGATTCTGAGAGA 59.835 50.000 20.33 12.54 35.74 3.10
3128 7313 2.094286 ACTCGGCAACAGATTCTGAGAG 60.094 50.000 20.33 18.36 36.86 3.20
3129 7314 1.895798 ACTCGGCAACAGATTCTGAGA 59.104 47.619 20.33 9.63 36.86 3.27
3130 7315 2.376808 ACTCGGCAACAGATTCTGAG 57.623 50.000 20.33 12.50 38.75 3.35
3131 7316 2.300152 AGAACTCGGCAACAGATTCTGA 59.700 45.455 20.33 0.00 35.18 3.27
3132 7317 2.693069 AGAACTCGGCAACAGATTCTG 58.307 47.619 12.17 12.17 37.52 3.02
3133 7318 3.409026 AAGAACTCGGCAACAGATTCT 57.591 42.857 0.00 0.00 0.00 2.40
3134 7319 4.214332 AGAAAAGAACTCGGCAACAGATTC 59.786 41.667 0.00 0.00 0.00 2.52
3135 7320 4.137543 AGAAAAGAACTCGGCAACAGATT 58.862 39.130 0.00 0.00 0.00 2.40
3136 7321 3.744660 AGAAAAGAACTCGGCAACAGAT 58.255 40.909 0.00 0.00 0.00 2.90
3137 7322 3.131396 GAGAAAAGAACTCGGCAACAGA 58.869 45.455 0.00 0.00 0.00 3.41
3138 7323 3.528009 GAGAAAAGAACTCGGCAACAG 57.472 47.619 0.00 0.00 0.00 3.16
3146 7331 5.480205 ACCTACAATCCGAGAAAAGAACTC 58.520 41.667 0.00 0.00 0.00 3.01
3147 7332 5.485209 ACCTACAATCCGAGAAAAGAACT 57.515 39.130 0.00 0.00 0.00 3.01
3148 7333 5.699458 TCAACCTACAATCCGAGAAAAGAAC 59.301 40.000 0.00 0.00 0.00 3.01
3149 7334 5.860611 TCAACCTACAATCCGAGAAAAGAA 58.139 37.500 0.00 0.00 0.00 2.52
3150 7335 5.245301 TCTCAACCTACAATCCGAGAAAAGA 59.755 40.000 0.00 0.00 0.00 2.52
3151 7336 5.479306 TCTCAACCTACAATCCGAGAAAAG 58.521 41.667 0.00 0.00 0.00 2.27
3152 7337 5.477607 TCTCAACCTACAATCCGAGAAAA 57.522 39.130 0.00 0.00 0.00 2.29
3153 7338 5.677319 ATCTCAACCTACAATCCGAGAAA 57.323 39.130 0.00 0.00 33.55 2.52
3154 7339 5.677319 AATCTCAACCTACAATCCGAGAA 57.323 39.130 0.00 0.00 33.55 2.87
3155 7340 5.661458 GAAATCTCAACCTACAATCCGAGA 58.339 41.667 0.00 0.00 34.28 4.04
3156 7341 4.504461 CGAAATCTCAACCTACAATCCGAG 59.496 45.833 0.00 0.00 0.00 4.63
3157 7342 4.158949 TCGAAATCTCAACCTACAATCCGA 59.841 41.667 0.00 0.00 0.00 4.55
3158 7343 4.430007 TCGAAATCTCAACCTACAATCCG 58.570 43.478 0.00 0.00 0.00 4.18
3159 7344 6.737254 TTTCGAAATCTCAACCTACAATCC 57.263 37.500 6.47 0.00 0.00 3.01
3160 7345 8.029642 TCTTTTCGAAATCTCAACCTACAATC 57.970 34.615 12.12 0.00 0.00 2.67
3161 7346 7.661847 ACTCTTTTCGAAATCTCAACCTACAAT 59.338 33.333 12.12 0.00 0.00 2.71
3162 7347 6.990349 ACTCTTTTCGAAATCTCAACCTACAA 59.010 34.615 12.12 0.00 0.00 2.41
3163 7348 6.522054 ACTCTTTTCGAAATCTCAACCTACA 58.478 36.000 12.12 0.00 0.00 2.74
3164 7349 7.041984 ACAACTCTTTTCGAAATCTCAACCTAC 60.042 37.037 12.12 0.00 0.00 3.18
3165 7350 6.990349 ACAACTCTTTTCGAAATCTCAACCTA 59.010 34.615 12.12 0.00 0.00 3.08
3166 7351 5.823045 ACAACTCTTTTCGAAATCTCAACCT 59.177 36.000 12.12 0.00 0.00 3.50
3167 7352 5.909610 CACAACTCTTTTCGAAATCTCAACC 59.090 40.000 12.12 0.00 0.00 3.77
3168 7353 6.412072 CACACAACTCTTTTCGAAATCTCAAC 59.588 38.462 12.12 0.00 0.00 3.18
3169 7354 6.486248 CACACAACTCTTTTCGAAATCTCAA 58.514 36.000 12.12 0.00 0.00 3.02
3170 7355 5.504010 GCACACAACTCTTTTCGAAATCTCA 60.504 40.000 12.12 0.00 0.00 3.27
3171 7356 4.906437 GCACACAACTCTTTTCGAAATCTC 59.094 41.667 12.12 0.00 0.00 2.75
3172 7357 4.576463 AGCACACAACTCTTTTCGAAATCT 59.424 37.500 12.12 0.00 0.00 2.40
3173 7358 4.672413 CAGCACACAACTCTTTTCGAAATC 59.328 41.667 12.12 0.00 0.00 2.17
3174 7359 4.335315 TCAGCACACAACTCTTTTCGAAAT 59.665 37.500 12.12 0.00 0.00 2.17
3175 7360 3.687212 TCAGCACACAACTCTTTTCGAAA 59.313 39.130 6.47 6.47 0.00 3.46
3176 7361 3.266636 TCAGCACACAACTCTTTTCGAA 58.733 40.909 0.00 0.00 0.00 3.71
3177 7362 2.899976 TCAGCACACAACTCTTTTCGA 58.100 42.857 0.00 0.00 0.00 3.71
3178 7363 3.885484 ATCAGCACACAACTCTTTTCG 57.115 42.857 0.00 0.00 0.00 3.46
3179 7364 6.148480 AGACATATCAGCACACAACTCTTTTC 59.852 38.462 0.00 0.00 0.00 2.29
3180 7365 6.000219 AGACATATCAGCACACAACTCTTTT 59.000 36.000 0.00 0.00 0.00 2.27
3181 7366 5.410746 CAGACATATCAGCACACAACTCTTT 59.589 40.000 0.00 0.00 0.00 2.52
3182 7367 4.934001 CAGACATATCAGCACACAACTCTT 59.066 41.667 0.00 0.00 0.00 2.85
3183 7368 4.020751 ACAGACATATCAGCACACAACTCT 60.021 41.667 0.00 0.00 0.00 3.24
3184 7369 4.248859 ACAGACATATCAGCACACAACTC 58.751 43.478 0.00 0.00 0.00 3.01
3185 7370 4.277515 ACAGACATATCAGCACACAACT 57.722 40.909 0.00 0.00 0.00 3.16
3186 7371 5.171476 ACTACAGACATATCAGCACACAAC 58.829 41.667 0.00 0.00 0.00 3.32
3187 7372 5.405935 ACTACAGACATATCAGCACACAA 57.594 39.130 0.00 0.00 0.00 3.33
3188 7373 6.239036 GGATACTACAGACATATCAGCACACA 60.239 42.308 0.00 0.00 0.00 3.72
3189 7374 6.153067 GGATACTACAGACATATCAGCACAC 58.847 44.000 0.00 0.00 0.00 3.82
3190 7375 6.332735 GGATACTACAGACATATCAGCACA 57.667 41.667 0.00 0.00 0.00 4.57
3205 7390 9.968743 CGAACAATTTTTGTCTAAGGATACTAC 57.031 33.333 0.00 0.00 46.87 2.73
3206 7391 9.158233 CCGAACAATTTTTGTCTAAGGATACTA 57.842 33.333 0.00 0.00 46.87 1.82
3208 7393 8.036273 TCCGAACAATTTTTGTCTAAGGATAC 57.964 34.615 0.00 0.00 44.59 2.24
3209 7394 8.624367 TTCCGAACAATTTTTGTCTAAGGATA 57.376 30.769 0.00 0.00 44.59 2.59
3210 7395 7.519032 TTCCGAACAATTTTTGTCTAAGGAT 57.481 32.000 0.00 0.00 44.59 3.24
3211 7396 6.945938 TTCCGAACAATTTTTGTCTAAGGA 57.054 33.333 0.00 0.00 44.59 3.36
3212 7397 7.651704 ACATTTCCGAACAATTTTTGTCTAAGG 59.348 33.333 0.00 0.00 44.59 2.69
3213 7398 8.574196 ACATTTCCGAACAATTTTTGTCTAAG 57.426 30.769 0.00 0.00 44.59 2.18
3214 7399 8.934507 AACATTTCCGAACAATTTTTGTCTAA 57.065 26.923 0.00 0.00 44.59 2.10
3216 7401 8.934507 TTAACATTTCCGAACAATTTTTGTCT 57.065 26.923 0.00 0.00 44.59 3.41
3217 7402 9.631639 CTTTAACATTTCCGAACAATTTTTGTC 57.368 29.630 0.00 0.00 44.59 3.18
3219 7404 7.585936 GGCTTTAACATTTCCGAACAATTTTTG 59.414 33.333 0.00 0.00 0.00 2.44
3220 7405 7.254966 GGGCTTTAACATTTCCGAACAATTTTT 60.255 33.333 0.00 0.00 0.00 1.94
3227 7412 3.004944 TGTGGGCTTTAACATTTCCGAAC 59.995 43.478 0.00 0.00 0.00 3.95
3482 7670 3.885901 TGGCAACTGCAGTGTAAACATTA 59.114 39.130 22.49 0.00 44.36 1.90
3483 7671 2.692557 TGGCAACTGCAGTGTAAACATT 59.307 40.909 22.49 0.00 44.36 2.71
3674 7862 9.743581 AAACGGGGAATTAAGAAATTAGACTTA 57.256 29.630 0.00 0.00 35.41 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.