Multiple sequence alignment - TraesCS6B01G134700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G134700 chr6B 100.000 2645 0 0 1 2645 131933123 131930479 0.000000e+00 4885.0
1 TraesCS6B01G134700 chr6B 94.163 257 15 0 1104 1360 651661653 651661397 2.470000e-105 392.0
2 TraesCS6B01G134700 chr6B 94.828 58 3 0 1933 1990 131909789 131909732 1.010000e-14 91.6
3 TraesCS6B01G134700 chr6D 89.576 1487 74 20 642 2075 58462396 58460938 0.000000e+00 1812.0
4 TraesCS6B01G134700 chr6D 95.709 536 21 2 2111 2645 58460772 58460238 0.000000e+00 861.0
5 TraesCS6B01G134700 chr6D 86.452 155 19 2 474 628 58462609 58462457 4.530000e-38 169.0
6 TraesCS6B01G134700 chr6A 92.184 1177 59 13 931 2075 73682636 73681461 0.000000e+00 1633.0
7 TraesCS6B01G134700 chr6A 92.336 535 27 2 2111 2645 73681295 73680775 0.000000e+00 749.0
8 TraesCS6B01G134700 chr6A 84.188 234 21 8 642 860 73682889 73682657 2.060000e-51 213.0
9 TraesCS6B01G134700 chr6A 86.452 155 19 2 474 628 73683102 73682950 4.530000e-38 169.0
10 TraesCS6B01G134700 chr7D 91.068 918 67 7 1000 1904 478414749 478415664 0.000000e+00 1227.0
11 TraesCS6B01G134700 chr7D 89.572 748 67 5 1000 1738 223709341 223710086 0.000000e+00 939.0
12 TraesCS6B01G134700 chr2B 89.788 754 60 8 1164 1904 401017632 401018381 0.000000e+00 950.0
13 TraesCS6B01G134700 chr2B 91.760 534 29 7 1385 1904 86848816 86848284 0.000000e+00 728.0
14 TraesCS6B01G134700 chr2B 85.317 252 31 1 2399 2644 640338630 640338881 3.380000e-64 255.0
15 TraesCS6B01G134700 chr7B 88.859 754 70 5 1164 1904 8676871 8676119 0.000000e+00 915.0
16 TraesCS6B01G134700 chr5B 91.386 534 31 7 1385 1904 290878567 290879099 0.000000e+00 717.0
17 TraesCS6B01G134700 chr5B 92.996 257 18 0 1104 1360 658346496 658346752 2.490000e-100 375.0
18 TraesCS6B01G134700 chr1A 90.399 552 38 7 1367 1904 365222469 365223019 0.000000e+00 712.0
19 TraesCS6B01G134700 chr1B 92.969 256 18 0 1105 1360 198114154 198113899 8.940000e-100 374.0
20 TraesCS6B01G134700 chr2D 85.317 252 31 1 2399 2644 537505227 537505478 3.380000e-64 255.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G134700 chr6B 131930479 131933123 2644 True 4885.000000 4885 100.000 1 2645 1 chr6B.!!$R2 2644
1 TraesCS6B01G134700 chr6D 58460238 58462609 2371 True 947.333333 1812 90.579 474 2645 3 chr6D.!!$R1 2171
2 TraesCS6B01G134700 chr6A 73680775 73683102 2327 True 691.000000 1633 88.790 474 2645 4 chr6A.!!$R1 2171
3 TraesCS6B01G134700 chr7D 478414749 478415664 915 False 1227.000000 1227 91.068 1000 1904 1 chr7D.!!$F2 904
4 TraesCS6B01G134700 chr7D 223709341 223710086 745 False 939.000000 939 89.572 1000 1738 1 chr7D.!!$F1 738
5 TraesCS6B01G134700 chr2B 401017632 401018381 749 False 950.000000 950 89.788 1164 1904 1 chr2B.!!$F1 740
6 TraesCS6B01G134700 chr2B 86848284 86848816 532 True 728.000000 728 91.760 1385 1904 1 chr2B.!!$R1 519
7 TraesCS6B01G134700 chr7B 8676119 8676871 752 True 915.000000 915 88.859 1164 1904 1 chr7B.!!$R1 740
8 TraesCS6B01G134700 chr5B 290878567 290879099 532 False 717.000000 717 91.386 1385 1904 1 chr5B.!!$F1 519
9 TraesCS6B01G134700 chr1A 365222469 365223019 550 False 712.000000 712 90.399 1367 1904 1 chr1A.!!$F1 537

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
924 1000 0.034059 CTGATCCCGCATCCCTACAC 59.966 60.0 0.0 0.0 0.0 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2015 2146 0.25589 GCCTCAAGGATGGGTTAGCA 59.744 55.0 0.0 0.0 37.39 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.789893 CGAAGGAGCTAAGATACAACGC 59.210 50.000 0.00 0.00 0.00 4.84
30 31 2.493713 AGGAGCTAAGATACAACGCG 57.506 50.000 3.53 3.53 0.00 6.01
31 32 1.067212 AGGAGCTAAGATACAACGCGG 59.933 52.381 12.47 0.00 0.00 6.46
32 33 1.202382 GGAGCTAAGATACAACGCGGT 60.202 52.381 12.47 0.00 0.00 5.68
33 34 2.117910 GAGCTAAGATACAACGCGGTC 58.882 52.381 12.47 0.00 0.00 4.79
34 35 0.844503 GCTAAGATACAACGCGGTCG 59.155 55.000 12.47 0.76 42.43 4.79
44 45 2.740826 CGCGGTCGTGGTTTCCAT 60.741 61.111 0.00 0.00 35.28 3.41
45 46 2.322081 CGCGGTCGTGGTTTCCATT 61.322 57.895 0.00 0.00 35.28 3.16
46 47 1.500396 GCGGTCGTGGTTTCCATTC 59.500 57.895 0.00 0.00 35.28 2.67
47 48 1.785321 CGGTCGTGGTTTCCATTCG 59.215 57.895 0.00 0.00 35.28 3.34
48 49 1.500396 GGTCGTGGTTTCCATTCGC 59.500 57.895 0.00 0.00 35.28 4.70
49 50 1.500396 GTCGTGGTTTCCATTCGCC 59.500 57.895 0.00 0.00 35.28 5.54
50 51 0.953960 GTCGTGGTTTCCATTCGCCT 60.954 55.000 0.00 0.00 35.28 5.52
51 52 0.609151 TCGTGGTTTCCATTCGCCTA 59.391 50.000 0.00 0.00 35.28 3.93
52 53 1.002201 TCGTGGTTTCCATTCGCCTAA 59.998 47.619 0.00 0.00 35.28 2.69
53 54 2.014128 CGTGGTTTCCATTCGCCTAAT 58.986 47.619 0.00 0.00 35.28 1.73
54 55 2.031683 CGTGGTTTCCATTCGCCTAATC 59.968 50.000 0.00 0.00 35.28 1.75
55 56 2.357952 GTGGTTTCCATTCGCCTAATCC 59.642 50.000 0.00 0.00 35.28 3.01
56 57 1.602377 GGTTTCCATTCGCCTAATCCG 59.398 52.381 0.00 0.00 0.00 4.18
57 58 2.285977 GTTTCCATTCGCCTAATCCGT 58.714 47.619 0.00 0.00 0.00 4.69
58 59 2.234300 TTCCATTCGCCTAATCCGTC 57.766 50.000 0.00 0.00 0.00 4.79
59 60 0.391597 TCCATTCGCCTAATCCGTCC 59.608 55.000 0.00 0.00 0.00 4.79
60 61 0.602905 CCATTCGCCTAATCCGTCCC 60.603 60.000 0.00 0.00 0.00 4.46
61 62 0.105964 CATTCGCCTAATCCGTCCCA 59.894 55.000 0.00 0.00 0.00 4.37
62 63 0.106149 ATTCGCCTAATCCGTCCCAC 59.894 55.000 0.00 0.00 0.00 4.61
63 64 2.279252 CGCCTAATCCGTCCCACG 60.279 66.667 0.00 0.00 42.11 4.94
64 65 2.777972 CGCCTAATCCGTCCCACGA 61.778 63.158 0.00 0.00 46.05 4.35
65 66 1.746517 GCCTAATCCGTCCCACGAT 59.253 57.895 0.00 0.00 46.05 3.73
66 67 0.106149 GCCTAATCCGTCCCACGATT 59.894 55.000 0.00 0.00 46.05 3.34
67 68 1.872653 GCCTAATCCGTCCCACGATTC 60.873 57.143 0.00 0.00 46.05 2.52
68 69 1.687123 CCTAATCCGTCCCACGATTCT 59.313 52.381 0.00 0.00 46.05 2.40
69 70 2.889045 CCTAATCCGTCCCACGATTCTA 59.111 50.000 0.00 0.00 46.05 2.10
70 71 2.884894 AATCCGTCCCACGATTCTAC 57.115 50.000 0.00 0.00 46.05 2.59
71 72 1.038280 ATCCGTCCCACGATTCTACC 58.962 55.000 0.00 0.00 46.05 3.18
72 73 1.065273 CCGTCCCACGATTCTACCG 59.935 63.158 0.00 0.00 46.05 4.02
73 74 1.660560 CCGTCCCACGATTCTACCGT 61.661 60.000 0.00 0.00 46.05 4.83
83 84 4.918037 ACGATTCTACCGTGAAGATACAC 58.082 43.478 0.00 0.00 38.97 2.90
84 85 4.397103 ACGATTCTACCGTGAAGATACACA 59.603 41.667 0.00 0.00 40.34 3.72
85 86 5.067413 ACGATTCTACCGTGAAGATACACAT 59.933 40.000 0.00 0.00 40.34 3.21
86 87 6.261603 ACGATTCTACCGTGAAGATACACATA 59.738 38.462 0.00 0.00 40.34 2.29
87 88 7.136772 CGATTCTACCGTGAAGATACACATAA 58.863 38.462 0.00 0.00 40.34 1.90
88 89 7.646526 CGATTCTACCGTGAAGATACACATAAA 59.353 37.037 0.00 0.00 40.34 1.40
89 90 9.477484 GATTCTACCGTGAAGATACACATAAAT 57.523 33.333 0.00 0.00 40.34 1.40
91 92 9.740239 TTCTACCGTGAAGATACACATAAATAC 57.260 33.333 0.00 0.00 40.34 1.89
92 93 9.128404 TCTACCGTGAAGATACACATAAATACT 57.872 33.333 0.00 0.00 40.34 2.12
93 94 9.395707 CTACCGTGAAGATACACATAAATACTC 57.604 37.037 0.00 0.00 40.34 2.59
94 95 7.778083 ACCGTGAAGATACACATAAATACTCA 58.222 34.615 0.00 0.00 40.34 3.41
95 96 7.921214 ACCGTGAAGATACACATAAATACTCAG 59.079 37.037 0.00 0.00 40.34 3.35
96 97 8.135529 CCGTGAAGATACACATAAATACTCAGA 58.864 37.037 0.00 0.00 40.34 3.27
97 98 9.516314 CGTGAAGATACACATAAATACTCAGAA 57.484 33.333 0.00 0.00 40.34 3.02
102 103 9.823647 AGATACACATAAATACTCAGAAGTTGG 57.176 33.333 0.00 0.00 36.92 3.77
103 104 9.817809 GATACACATAAATACTCAGAAGTTGGA 57.182 33.333 0.00 0.00 36.92 3.53
106 107 8.950210 ACACATAAATACTCAGAAGTTGGAATG 58.050 33.333 0.00 0.00 36.92 2.67
107 108 9.166173 CACATAAATACTCAGAAGTTGGAATGA 57.834 33.333 0.00 0.00 36.92 2.57
108 109 9.388506 ACATAAATACTCAGAAGTTGGAATGAG 57.611 33.333 0.00 0.00 43.81 2.90
109 110 8.834465 CATAAATACTCAGAAGTTGGAATGAGG 58.166 37.037 6.07 0.00 42.76 3.86
110 111 3.064900 ACTCAGAAGTTGGAATGAGGC 57.935 47.619 6.07 0.00 42.76 4.70
111 112 2.641815 ACTCAGAAGTTGGAATGAGGCT 59.358 45.455 6.07 0.00 42.76 4.58
112 113 3.073650 ACTCAGAAGTTGGAATGAGGCTT 59.926 43.478 6.07 0.00 42.76 4.35
113 114 4.077822 CTCAGAAGTTGGAATGAGGCTTT 58.922 43.478 0.00 0.00 36.39 3.51
114 115 4.074970 TCAGAAGTTGGAATGAGGCTTTC 58.925 43.478 0.00 0.00 0.00 2.62
115 116 3.822735 CAGAAGTTGGAATGAGGCTTTCA 59.177 43.478 1.69 0.00 40.85 2.69
116 117 3.823304 AGAAGTTGGAATGAGGCTTTCAC 59.177 43.478 1.69 0.00 38.99 3.18
117 118 3.515602 AGTTGGAATGAGGCTTTCACT 57.484 42.857 1.69 0.00 38.99 3.41
118 119 3.837355 AGTTGGAATGAGGCTTTCACTT 58.163 40.909 1.69 0.00 38.99 3.16
119 120 4.218312 AGTTGGAATGAGGCTTTCACTTT 58.782 39.130 1.69 0.00 38.99 2.66
120 121 4.651045 AGTTGGAATGAGGCTTTCACTTTT 59.349 37.500 1.69 0.00 38.99 2.27
121 122 5.129320 AGTTGGAATGAGGCTTTCACTTTTT 59.871 36.000 1.69 0.00 38.99 1.94
141 142 6.515272 TTTTTCCTGTGAATAGAATGAGGC 57.485 37.500 0.00 0.00 0.00 4.70
142 143 5.441718 TTTCCTGTGAATAGAATGAGGCT 57.558 39.130 0.00 0.00 0.00 4.58
143 144 5.441718 TTCCTGTGAATAGAATGAGGCTT 57.558 39.130 0.00 0.00 0.00 4.35
144 145 5.441718 TCCTGTGAATAGAATGAGGCTTT 57.558 39.130 0.00 0.00 0.00 3.51
145 146 5.431765 TCCTGTGAATAGAATGAGGCTTTC 58.568 41.667 0.00 0.00 0.00 2.62
146 147 5.045651 TCCTGTGAATAGAATGAGGCTTTCA 60.046 40.000 2.06 0.00 40.85 2.69
175 176 9.515020 AATAGTAATTGTTTCAAATATGCACGG 57.485 29.630 0.00 0.00 0.00 4.94
176 177 6.329496 AGTAATTGTTTCAAATATGCACGGG 58.671 36.000 0.00 0.00 0.00 5.28
177 178 3.584406 TTGTTTCAAATATGCACGGGG 57.416 42.857 0.00 0.00 0.00 5.73
178 179 1.821753 TGTTTCAAATATGCACGGGGG 59.178 47.619 0.00 0.00 0.00 5.40
179 180 1.822371 GTTTCAAATATGCACGGGGGT 59.178 47.619 0.00 0.00 0.00 4.95
180 181 3.018149 GTTTCAAATATGCACGGGGGTA 58.982 45.455 0.00 0.00 0.00 3.69
181 182 2.335316 TCAAATATGCACGGGGGTAC 57.665 50.000 0.00 0.00 0.00 3.34
182 183 1.560146 TCAAATATGCACGGGGGTACA 59.440 47.619 0.00 0.00 0.00 2.90
183 184 2.173782 TCAAATATGCACGGGGGTACAT 59.826 45.455 0.00 0.00 0.00 2.29
184 185 2.270352 AATATGCACGGGGGTACATG 57.730 50.000 0.00 0.00 0.00 3.21
185 186 0.400213 ATATGCACGGGGGTACATGG 59.600 55.000 0.00 0.00 0.00 3.66
186 187 0.983905 TATGCACGGGGGTACATGGT 60.984 55.000 0.00 0.00 0.00 3.55
187 188 1.858739 ATGCACGGGGGTACATGGTT 61.859 55.000 0.00 0.00 0.00 3.67
188 189 1.747745 GCACGGGGGTACATGGTTC 60.748 63.158 0.00 0.00 0.00 3.62
189 190 1.988015 CACGGGGGTACATGGTTCT 59.012 57.895 0.00 0.00 0.00 3.01
190 191 0.392461 CACGGGGGTACATGGTTCTG 60.392 60.000 0.00 0.00 0.00 3.02
191 192 1.451387 CGGGGGTACATGGTTCTGC 60.451 63.158 0.00 0.00 0.00 4.26
192 193 1.688811 GGGGGTACATGGTTCTGCA 59.311 57.895 0.00 0.00 0.00 4.41
193 194 0.394352 GGGGGTACATGGTTCTGCAG 60.394 60.000 7.63 7.63 0.00 4.41
194 195 0.394352 GGGGTACATGGTTCTGCAGG 60.394 60.000 15.13 0.00 0.00 4.85
195 196 0.328258 GGGTACATGGTTCTGCAGGT 59.672 55.000 15.13 5.02 0.00 4.00
196 197 1.271926 GGGTACATGGTTCTGCAGGTT 60.272 52.381 15.13 0.00 0.00 3.50
197 198 2.084546 GGTACATGGTTCTGCAGGTTC 58.915 52.381 15.13 4.57 0.00 3.62
198 199 2.290323 GGTACATGGTTCTGCAGGTTCT 60.290 50.000 15.13 0.00 0.00 3.01
199 200 3.055385 GGTACATGGTTCTGCAGGTTCTA 60.055 47.826 15.13 3.14 0.00 2.10
200 201 3.340814 ACATGGTTCTGCAGGTTCTAG 57.659 47.619 15.13 3.27 0.00 2.43
201 202 2.639839 ACATGGTTCTGCAGGTTCTAGT 59.360 45.455 15.13 3.93 0.00 2.57
202 203 3.838317 ACATGGTTCTGCAGGTTCTAGTA 59.162 43.478 15.13 0.00 0.00 1.82
203 204 4.286032 ACATGGTTCTGCAGGTTCTAGTAA 59.714 41.667 15.13 0.00 0.00 2.24
204 205 5.045578 ACATGGTTCTGCAGGTTCTAGTAAT 60.046 40.000 15.13 0.00 0.00 1.89
205 206 5.499004 TGGTTCTGCAGGTTCTAGTAATT 57.501 39.130 15.13 0.00 0.00 1.40
206 207 5.488341 TGGTTCTGCAGGTTCTAGTAATTC 58.512 41.667 15.13 0.00 0.00 2.17
207 208 5.248477 TGGTTCTGCAGGTTCTAGTAATTCT 59.752 40.000 15.13 0.00 0.00 2.40
208 209 5.813157 GGTTCTGCAGGTTCTAGTAATTCTC 59.187 44.000 15.13 0.00 0.00 2.87
209 210 6.351456 GGTTCTGCAGGTTCTAGTAATTCTCT 60.351 42.308 15.13 0.00 0.00 3.10
210 211 6.458232 TCTGCAGGTTCTAGTAATTCTCTC 57.542 41.667 15.13 0.00 0.00 3.20
211 212 5.952347 TCTGCAGGTTCTAGTAATTCTCTCA 59.048 40.000 15.13 0.00 0.00 3.27
212 213 5.967088 TGCAGGTTCTAGTAATTCTCTCAC 58.033 41.667 0.00 0.00 0.00 3.51
213 214 5.717178 TGCAGGTTCTAGTAATTCTCTCACT 59.283 40.000 0.00 0.00 0.00 3.41
214 215 6.890268 TGCAGGTTCTAGTAATTCTCTCACTA 59.110 38.462 0.00 0.00 0.00 2.74
215 216 7.067615 TGCAGGTTCTAGTAATTCTCTCACTAG 59.932 40.741 6.14 6.14 41.98 2.57
216 217 7.067737 GCAGGTTCTAGTAATTCTCTCACTAGT 59.932 40.741 10.65 0.00 41.56 2.57
217 218 8.617809 CAGGTTCTAGTAATTCTCTCACTAGTC 58.382 40.741 10.65 6.85 41.56 2.59
218 219 7.776500 AGGTTCTAGTAATTCTCTCACTAGTCC 59.224 40.741 10.65 12.74 41.56 3.85
219 220 7.556996 GGTTCTAGTAATTCTCTCACTAGTCCA 59.443 40.741 10.65 0.00 41.56 4.02
220 221 8.617809 GTTCTAGTAATTCTCTCACTAGTCCAG 58.382 40.741 10.65 0.00 41.56 3.86
221 222 8.091952 TCTAGTAATTCTCTCACTAGTCCAGA 57.908 38.462 10.65 0.00 41.56 3.86
222 223 8.719596 TCTAGTAATTCTCTCACTAGTCCAGAT 58.280 37.037 10.65 0.00 41.56 2.90
223 224 7.817418 AGTAATTCTCTCACTAGTCCAGATC 57.183 40.000 0.00 0.00 0.00 2.75
224 225 7.350382 AGTAATTCTCTCACTAGTCCAGATCA 58.650 38.462 0.00 0.00 0.00 2.92
225 226 6.463995 AATTCTCTCACTAGTCCAGATCAC 57.536 41.667 0.00 0.00 0.00 3.06
226 227 4.576330 TCTCTCACTAGTCCAGATCACA 57.424 45.455 0.00 0.00 0.00 3.58
227 228 4.265893 TCTCTCACTAGTCCAGATCACAC 58.734 47.826 0.00 0.00 0.00 3.82
228 229 4.013050 CTCTCACTAGTCCAGATCACACA 58.987 47.826 0.00 0.00 0.00 3.72
229 230 3.759086 TCTCACTAGTCCAGATCACACAC 59.241 47.826 0.00 0.00 0.00 3.82
230 231 3.496331 TCACTAGTCCAGATCACACACA 58.504 45.455 0.00 0.00 0.00 3.72
231 232 4.089361 TCACTAGTCCAGATCACACACAT 58.911 43.478 0.00 0.00 0.00 3.21
232 233 4.158579 TCACTAGTCCAGATCACACACATC 59.841 45.833 0.00 0.00 0.00 3.06
233 234 3.449018 ACTAGTCCAGATCACACACATCC 59.551 47.826 0.00 0.00 0.00 3.51
234 235 1.205655 AGTCCAGATCACACACATCCG 59.794 52.381 0.00 0.00 0.00 4.18
235 236 1.204704 GTCCAGATCACACACATCCGA 59.795 52.381 0.00 0.00 0.00 4.55
236 237 2.110578 TCCAGATCACACACATCCGAT 58.889 47.619 0.00 0.00 0.00 4.18
237 238 3.068165 GTCCAGATCACACACATCCGATA 59.932 47.826 0.00 0.00 0.00 2.92
238 239 3.897505 TCCAGATCACACACATCCGATAT 59.102 43.478 0.00 0.00 0.00 1.63
239 240 5.048013 GTCCAGATCACACACATCCGATATA 60.048 44.000 0.00 0.00 0.00 0.86
240 241 5.183904 TCCAGATCACACACATCCGATATAG 59.816 44.000 0.00 0.00 0.00 1.31
241 242 5.047731 CCAGATCACACACATCCGATATAGT 60.048 44.000 0.00 0.00 0.00 2.12
242 243 6.151144 CCAGATCACACACATCCGATATAGTA 59.849 42.308 0.00 0.00 0.00 1.82
243 244 7.024171 CAGATCACACACATCCGATATAGTAC 58.976 42.308 0.00 0.00 0.00 2.73
244 245 6.715264 AGATCACACACATCCGATATAGTACA 59.285 38.462 0.00 0.00 0.00 2.90
245 246 6.894339 TCACACACATCCGATATAGTACAT 57.106 37.500 0.00 0.00 0.00 2.29
246 247 6.677913 TCACACACATCCGATATAGTACATG 58.322 40.000 0.00 0.00 0.00 3.21
247 248 5.863935 CACACACATCCGATATAGTACATGG 59.136 44.000 0.00 0.00 0.00 3.66
248 249 5.538813 ACACACATCCGATATAGTACATGGT 59.461 40.000 0.00 0.00 0.00 3.55
249 250 6.041637 ACACACATCCGATATAGTACATGGTT 59.958 38.462 0.00 0.00 0.00 3.67
250 251 6.366061 CACACATCCGATATAGTACATGGTTG 59.634 42.308 0.00 0.00 0.00 3.77
251 252 6.041637 ACACATCCGATATAGTACATGGTTGT 59.958 38.462 0.00 0.00 39.98 3.32
252 253 6.366061 CACATCCGATATAGTACATGGTTGTG 59.634 42.308 0.00 6.03 39.44 3.33
253 254 4.878439 TCCGATATAGTACATGGTTGTGC 58.122 43.478 0.00 0.00 38.60 4.57
254 255 4.342665 TCCGATATAGTACATGGTTGTGCA 59.657 41.667 0.00 0.00 40.55 4.57
255 256 5.053811 CCGATATAGTACATGGTTGTGCAA 58.946 41.667 0.00 0.00 40.55 4.08
256 257 5.177511 CCGATATAGTACATGGTTGTGCAAG 59.822 44.000 0.00 0.00 40.55 4.01
257 258 5.753438 CGATATAGTACATGGTTGTGCAAGT 59.247 40.000 0.00 0.00 40.55 3.16
258 259 6.257849 CGATATAGTACATGGTTGTGCAAGTT 59.742 38.462 0.00 0.00 40.55 2.66
259 260 5.880054 ATAGTACATGGTTGTGCAAGTTC 57.120 39.130 0.00 0.00 40.55 3.01
260 261 3.550820 AGTACATGGTTGTGCAAGTTCA 58.449 40.909 0.00 0.00 40.55 3.18
261 262 3.565482 AGTACATGGTTGTGCAAGTTCAG 59.435 43.478 0.00 0.00 40.55 3.02
262 263 2.653726 ACATGGTTGTGCAAGTTCAGA 58.346 42.857 0.00 0.00 33.85 3.27
263 264 3.225104 ACATGGTTGTGCAAGTTCAGAT 58.775 40.909 0.00 0.00 33.85 2.90
264 265 3.254166 ACATGGTTGTGCAAGTTCAGATC 59.746 43.478 0.00 0.00 33.85 2.75
265 266 2.929641 TGGTTGTGCAAGTTCAGATCA 58.070 42.857 0.00 0.00 0.00 2.92
266 267 2.618241 TGGTTGTGCAAGTTCAGATCAC 59.382 45.455 0.00 0.00 0.00 3.06
267 268 2.618241 GGTTGTGCAAGTTCAGATCACA 59.382 45.455 0.00 0.00 36.07 3.58
268 269 3.548818 GGTTGTGCAAGTTCAGATCACAC 60.549 47.826 0.00 0.00 37.39 3.82
269 270 2.916640 TGTGCAAGTTCAGATCACACA 58.083 42.857 0.00 0.00 33.33 3.72
270 271 2.613595 TGTGCAAGTTCAGATCACACAC 59.386 45.455 0.00 0.00 33.33 3.82
271 272 2.613595 GTGCAAGTTCAGATCACACACA 59.386 45.455 0.00 0.00 0.00 3.72
272 273 2.613595 TGCAAGTTCAGATCACACACAC 59.386 45.455 0.00 0.00 0.00 3.82
273 274 2.613595 GCAAGTTCAGATCACACACACA 59.386 45.455 0.00 0.00 0.00 3.72
274 275 3.546815 GCAAGTTCAGATCACACACACAC 60.547 47.826 0.00 0.00 0.00 3.82
275 276 3.541996 AGTTCAGATCACACACACACA 57.458 42.857 0.00 0.00 0.00 3.72
276 277 3.198068 AGTTCAGATCACACACACACAC 58.802 45.455 0.00 0.00 0.00 3.82
277 278 1.851658 TCAGATCACACACACACACG 58.148 50.000 0.00 0.00 0.00 4.49
278 279 0.861185 CAGATCACACACACACACGG 59.139 55.000 0.00 0.00 0.00 4.94
279 280 0.249868 AGATCACACACACACACGGG 60.250 55.000 0.00 0.00 0.00 5.28
280 281 1.227823 ATCACACACACACACGGGG 60.228 57.895 0.00 0.00 0.00 5.73
281 282 1.978455 ATCACACACACACACGGGGT 61.978 55.000 0.00 0.00 0.00 4.95
282 283 1.747367 CACACACACACACGGGGTT 60.747 57.895 0.00 0.00 0.00 4.11
283 284 1.747367 ACACACACACACGGGGTTG 60.747 57.895 0.00 0.00 0.00 3.77
284 285 1.747367 CACACACACACGGGGTTGT 60.747 57.895 0.00 0.00 0.00 3.32
289 290 3.030652 CACACGGGGTTGTGCTTC 58.969 61.111 0.00 0.00 43.74 3.86
290 291 1.821759 CACACGGGGTTGTGCTTCA 60.822 57.895 0.00 0.00 43.74 3.02
291 292 1.077357 ACACGGGGTTGTGCTTCAA 60.077 52.632 0.00 0.00 43.74 2.69
298 299 3.834726 TTGTGCTTCAACCCGGTG 58.165 55.556 0.00 0.00 0.00 4.94
299 300 2.485795 TTGTGCTTCAACCCGGTGC 61.486 57.895 0.00 0.00 0.00 5.01
300 301 2.904866 GTGCTTCAACCCGGTGCA 60.905 61.111 0.00 0.00 0.00 4.57
301 302 2.115052 TGCTTCAACCCGGTGCAT 59.885 55.556 0.00 0.00 0.00 3.96
302 303 1.530419 TGCTTCAACCCGGTGCATT 60.530 52.632 0.00 0.00 0.00 3.56
303 304 1.112315 TGCTTCAACCCGGTGCATTT 61.112 50.000 0.00 0.00 0.00 2.32
304 305 0.885196 GCTTCAACCCGGTGCATTTA 59.115 50.000 0.00 0.00 0.00 1.40
305 306 1.402325 GCTTCAACCCGGTGCATTTAC 60.402 52.381 0.00 0.00 0.00 2.01
306 307 1.883275 CTTCAACCCGGTGCATTTACA 59.117 47.619 0.00 0.00 0.00 2.41
307 308 1.982660 TCAACCCGGTGCATTTACAA 58.017 45.000 0.00 0.00 0.00 2.41
308 309 2.520069 TCAACCCGGTGCATTTACAAT 58.480 42.857 0.00 0.00 0.00 2.71
309 310 3.687125 TCAACCCGGTGCATTTACAATA 58.313 40.909 0.00 0.00 0.00 1.90
310 311 4.274147 TCAACCCGGTGCATTTACAATAT 58.726 39.130 0.00 0.00 0.00 1.28
311 312 4.707448 TCAACCCGGTGCATTTACAATATT 59.293 37.500 0.00 0.00 0.00 1.28
312 313 5.886474 TCAACCCGGTGCATTTACAATATTA 59.114 36.000 0.00 0.00 0.00 0.98
313 314 6.038825 TCAACCCGGTGCATTTACAATATTAG 59.961 38.462 0.00 0.00 0.00 1.73
314 315 5.442391 ACCCGGTGCATTTACAATATTAGT 58.558 37.500 0.00 0.00 0.00 2.24
315 316 5.889289 ACCCGGTGCATTTACAATATTAGTT 59.111 36.000 0.00 0.00 0.00 2.24
316 317 7.055378 ACCCGGTGCATTTACAATATTAGTTA 58.945 34.615 0.00 0.00 0.00 2.24
317 318 7.227910 ACCCGGTGCATTTACAATATTAGTTAG 59.772 37.037 0.00 0.00 0.00 2.34
318 319 7.308348 CCCGGTGCATTTACAATATTAGTTAGG 60.308 40.741 0.00 0.00 0.00 2.69
319 320 7.308348 CCGGTGCATTTACAATATTAGTTAGGG 60.308 40.741 0.00 0.00 0.00 3.53
320 321 7.227910 CGGTGCATTTACAATATTAGTTAGGGT 59.772 37.037 0.00 0.00 0.00 4.34
321 322 8.349983 GGTGCATTTACAATATTAGTTAGGGTG 58.650 37.037 0.00 0.00 0.00 4.61
322 323 8.349983 GTGCATTTACAATATTAGTTAGGGTGG 58.650 37.037 0.00 0.00 0.00 4.61
323 324 8.056400 TGCATTTACAATATTAGTTAGGGTGGT 58.944 33.333 0.00 0.00 0.00 4.16
324 325 8.349983 GCATTTACAATATTAGTTAGGGTGGTG 58.650 37.037 0.00 0.00 0.00 4.17
325 326 7.868906 TTTACAATATTAGTTAGGGTGGTGC 57.131 36.000 0.00 0.00 0.00 5.01
326 327 5.444744 ACAATATTAGTTAGGGTGGTGCA 57.555 39.130 0.00 0.00 0.00 4.57
327 328 5.822204 ACAATATTAGTTAGGGTGGTGCAA 58.178 37.500 0.00 0.00 0.00 4.08
328 329 6.431722 ACAATATTAGTTAGGGTGGTGCAAT 58.568 36.000 0.00 0.00 0.00 3.56
329 330 6.895204 ACAATATTAGTTAGGGTGGTGCAATT 59.105 34.615 0.00 0.00 0.00 2.32
330 331 7.398904 ACAATATTAGTTAGGGTGGTGCAATTT 59.601 33.333 0.00 0.00 0.00 1.82
331 332 5.659440 ATTAGTTAGGGTGGTGCAATTTG 57.341 39.130 0.00 0.00 0.00 2.32
332 333 2.247358 AGTTAGGGTGGTGCAATTTGG 58.753 47.619 0.00 0.00 0.00 3.28
333 334 1.967779 GTTAGGGTGGTGCAATTTGGT 59.032 47.619 0.00 0.00 0.00 3.67
334 335 2.367241 GTTAGGGTGGTGCAATTTGGTT 59.633 45.455 0.00 0.00 0.00 3.67
335 336 2.390225 AGGGTGGTGCAATTTGGTTA 57.610 45.000 0.00 0.00 0.00 2.85
336 337 2.683768 AGGGTGGTGCAATTTGGTTAA 58.316 42.857 0.00 0.00 0.00 2.01
337 338 2.367241 AGGGTGGTGCAATTTGGTTAAC 59.633 45.455 0.00 0.00 0.00 2.01
338 339 2.367241 GGGTGGTGCAATTTGGTTAACT 59.633 45.455 5.42 0.00 0.00 2.24
339 340 3.389221 GGTGGTGCAATTTGGTTAACTG 58.611 45.455 5.42 0.00 0.00 3.16
340 341 3.068873 GGTGGTGCAATTTGGTTAACTGA 59.931 43.478 5.42 0.00 0.00 3.41
341 342 4.262420 GGTGGTGCAATTTGGTTAACTGAT 60.262 41.667 5.42 0.00 0.00 2.90
342 343 5.296748 GTGGTGCAATTTGGTTAACTGATT 58.703 37.500 5.42 1.27 0.00 2.57
343 344 6.451393 GTGGTGCAATTTGGTTAACTGATTA 58.549 36.000 5.42 0.00 0.00 1.75
344 345 7.096551 GTGGTGCAATTTGGTTAACTGATTAT 58.903 34.615 5.42 0.00 0.00 1.28
345 346 8.247562 GTGGTGCAATTTGGTTAACTGATTATA 58.752 33.333 5.42 0.00 0.00 0.98
346 347 8.976353 TGGTGCAATTTGGTTAACTGATTATAT 58.024 29.630 5.42 0.00 0.00 0.86
347 348 9.248291 GGTGCAATTTGGTTAACTGATTATATG 57.752 33.333 5.42 0.00 0.00 1.78
348 349 9.801873 GTGCAATTTGGTTAACTGATTATATGT 57.198 29.630 5.42 0.00 0.00 2.29
349 350 9.800433 TGCAATTTGGTTAACTGATTATATGTG 57.200 29.630 5.42 0.00 0.00 3.21
350 351 9.248291 GCAATTTGGTTAACTGATTATATGTGG 57.752 33.333 5.42 0.00 0.00 4.17
356 357 9.913310 TGGTTAACTGATTATATGTGGAAATGA 57.087 29.630 5.42 0.00 0.00 2.57
362 363 8.355169 ACTGATTATATGTGGAAATGATTGTGC 58.645 33.333 0.00 0.00 0.00 4.57
363 364 8.467963 TGATTATATGTGGAAATGATTGTGCT 57.532 30.769 0.00 0.00 0.00 4.40
364 365 8.916062 TGATTATATGTGGAAATGATTGTGCTT 58.084 29.630 0.00 0.00 0.00 3.91
365 366 9.754382 GATTATATGTGGAAATGATTGTGCTTT 57.246 29.630 0.00 0.00 0.00 3.51
369 370 7.837202 ATGTGGAAATGATTGTGCTTTATTG 57.163 32.000 0.00 0.00 0.00 1.90
370 371 6.990798 TGTGGAAATGATTGTGCTTTATTGA 58.009 32.000 0.00 0.00 0.00 2.57
371 372 7.092079 TGTGGAAATGATTGTGCTTTATTGAG 58.908 34.615 0.00 0.00 0.00 3.02
372 373 6.035327 GTGGAAATGATTGTGCTTTATTGAGC 59.965 38.462 0.00 0.00 43.00 4.26
373 374 6.071221 TGGAAATGATTGTGCTTTATTGAGCT 60.071 34.615 0.00 0.00 43.11 4.09
374 375 7.122501 TGGAAATGATTGTGCTTTATTGAGCTA 59.877 33.333 0.00 0.00 43.11 3.32
375 376 7.433425 GGAAATGATTGTGCTTTATTGAGCTAC 59.567 37.037 0.00 0.00 43.11 3.58
376 377 7.636150 AATGATTGTGCTTTATTGAGCTACT 57.364 32.000 0.00 0.00 43.11 2.57
377 378 6.668541 TGATTGTGCTTTATTGAGCTACTC 57.331 37.500 0.00 0.00 43.11 2.59
378 379 6.172630 TGATTGTGCTTTATTGAGCTACTCA 58.827 36.000 0.00 0.00 43.11 3.41
379 380 5.862924 TTGTGCTTTATTGAGCTACTCAC 57.137 39.130 0.00 0.00 40.46 3.51
380 381 4.893608 TGTGCTTTATTGAGCTACTCACA 58.106 39.130 0.00 0.00 40.46 3.58
381 382 5.304778 TGTGCTTTATTGAGCTACTCACAA 58.695 37.500 0.00 0.00 40.46 3.33
382 383 5.179368 TGTGCTTTATTGAGCTACTCACAAC 59.821 40.000 0.00 0.00 40.46 3.32
383 384 4.695455 TGCTTTATTGAGCTACTCACAACC 59.305 41.667 0.00 0.00 40.46 3.77
384 385 4.095036 GCTTTATTGAGCTACTCACAACCC 59.905 45.833 0.00 0.00 40.46 4.11
385 386 2.789409 ATTGAGCTACTCACAACCCC 57.211 50.000 0.00 0.00 40.46 4.95
386 387 0.690762 TTGAGCTACTCACAACCCCC 59.309 55.000 0.00 0.00 40.46 5.40
387 388 1.218316 GAGCTACTCACAACCCCCG 59.782 63.158 0.00 0.00 0.00 5.73
388 389 2.436115 GCTACTCACAACCCCCGC 60.436 66.667 0.00 0.00 0.00 6.13
389 390 2.267961 CTACTCACAACCCCCGCC 59.732 66.667 0.00 0.00 0.00 6.13
390 391 2.203877 TACTCACAACCCCCGCCT 60.204 61.111 0.00 0.00 0.00 5.52
391 392 2.240162 CTACTCACAACCCCCGCCTC 62.240 65.000 0.00 0.00 0.00 4.70
392 393 4.410400 CTCACAACCCCCGCCTCC 62.410 72.222 0.00 0.00 0.00 4.30
403 404 2.967397 CGCCTCCGGTACTTGTGA 59.033 61.111 0.00 0.00 0.00 3.58
404 405 1.515954 CGCCTCCGGTACTTGTGAT 59.484 57.895 0.00 0.00 0.00 3.06
405 406 0.806102 CGCCTCCGGTACTTGTGATG 60.806 60.000 0.00 0.00 0.00 3.07
406 407 0.535335 GCCTCCGGTACTTGTGATGA 59.465 55.000 0.00 0.00 0.00 2.92
407 408 1.139058 GCCTCCGGTACTTGTGATGAT 59.861 52.381 0.00 0.00 0.00 2.45
408 409 2.826428 CCTCCGGTACTTGTGATGATG 58.174 52.381 0.00 0.00 0.00 3.07
409 410 2.430694 CCTCCGGTACTTGTGATGATGA 59.569 50.000 0.00 0.00 0.00 2.92
410 411 3.070159 CCTCCGGTACTTGTGATGATGAT 59.930 47.826 0.00 0.00 0.00 2.45
411 412 4.280929 CCTCCGGTACTTGTGATGATGATA 59.719 45.833 0.00 0.00 0.00 2.15
412 413 5.047021 CCTCCGGTACTTGTGATGATGATAT 60.047 44.000 0.00 0.00 0.00 1.63
413 414 6.419484 TCCGGTACTTGTGATGATGATATT 57.581 37.500 0.00 0.00 0.00 1.28
414 415 6.455647 TCCGGTACTTGTGATGATGATATTC 58.544 40.000 0.00 0.00 0.00 1.75
415 416 6.267699 TCCGGTACTTGTGATGATGATATTCT 59.732 38.462 0.00 0.00 0.00 2.40
416 417 6.931281 CCGGTACTTGTGATGATGATATTCTT 59.069 38.462 0.00 0.00 0.00 2.52
417 418 7.442364 CCGGTACTTGTGATGATGATATTCTTT 59.558 37.037 0.00 0.00 0.00 2.52
418 419 9.476202 CGGTACTTGTGATGATGATATTCTTTA 57.524 33.333 0.00 0.00 0.00 1.85
422 423 9.857656 ACTTGTGATGATGATATTCTTTATGGT 57.142 29.630 0.00 0.00 0.00 3.55
424 425 8.625786 TGTGATGATGATATTCTTTATGGTGG 57.374 34.615 0.00 0.00 0.00 4.61
425 426 8.439172 TGTGATGATGATATTCTTTATGGTGGA 58.561 33.333 0.00 0.00 0.00 4.02
426 427 9.288576 GTGATGATGATATTCTTTATGGTGGAA 57.711 33.333 0.00 0.00 0.00 3.53
427 428 9.865152 TGATGATGATATTCTTTATGGTGGAAA 57.135 29.630 0.00 0.00 0.00 3.13
438 439 8.934023 TCTTTATGGTGGAAATTTGTTCTAGT 57.066 30.769 0.00 0.00 0.00 2.57
444 445 9.838339 ATGGTGGAAATTTGTTCTAGTATCTAG 57.162 33.333 0.00 0.00 0.00 2.43
445 446 8.265055 TGGTGGAAATTTGTTCTAGTATCTAGG 58.735 37.037 0.00 0.00 0.00 3.02
446 447 8.265764 GGTGGAAATTTGTTCTAGTATCTAGGT 58.734 37.037 0.00 0.00 0.00 3.08
447 448 9.099454 GTGGAAATTTGTTCTAGTATCTAGGTG 57.901 37.037 0.00 0.00 0.00 4.00
448 449 8.822805 TGGAAATTTGTTCTAGTATCTAGGTGT 58.177 33.333 0.00 0.00 0.00 4.16
449 450 9.668497 GGAAATTTGTTCTAGTATCTAGGTGTT 57.332 33.333 0.00 0.00 0.00 3.32
451 452 9.449719 AAATTTGTTCTAGTATCTAGGTGTTGG 57.550 33.333 0.00 0.00 0.00 3.77
452 453 7.549147 TTTGTTCTAGTATCTAGGTGTTGGT 57.451 36.000 4.32 0.00 0.00 3.67
453 454 7.549147 TTGTTCTAGTATCTAGGTGTTGGTT 57.451 36.000 4.32 0.00 0.00 3.67
454 455 8.654485 TTGTTCTAGTATCTAGGTGTTGGTTA 57.346 34.615 4.32 0.00 0.00 2.85
455 456 8.059798 TGTTCTAGTATCTAGGTGTTGGTTAC 57.940 38.462 4.32 0.00 0.00 2.50
456 457 7.670979 TGTTCTAGTATCTAGGTGTTGGTTACA 59.329 37.037 4.32 0.00 0.00 2.41
457 458 8.693625 GTTCTAGTATCTAGGTGTTGGTTACAT 58.306 37.037 4.32 0.00 39.39 2.29
458 459 8.234136 TCTAGTATCTAGGTGTTGGTTACATG 57.766 38.462 0.00 0.00 39.39 3.21
459 460 6.235231 AGTATCTAGGTGTTGGTTACATGG 57.765 41.667 0.00 0.00 39.39 3.66
460 461 5.724854 AGTATCTAGGTGTTGGTTACATGGT 59.275 40.000 0.00 0.00 39.39 3.55
461 462 6.899075 AGTATCTAGGTGTTGGTTACATGGTA 59.101 38.462 0.00 0.00 39.39 3.25
462 463 5.410355 TCTAGGTGTTGGTTACATGGTAC 57.590 43.478 0.00 0.00 39.39 3.34
463 464 5.088730 TCTAGGTGTTGGTTACATGGTACT 58.911 41.667 0.00 0.00 39.39 2.73
464 465 4.717279 AGGTGTTGGTTACATGGTACTT 57.283 40.909 0.00 0.00 39.39 2.24
465 466 4.648651 AGGTGTTGGTTACATGGTACTTC 58.351 43.478 0.00 0.00 39.39 3.01
466 467 3.434299 GGTGTTGGTTACATGGTACTTCG 59.566 47.826 0.00 0.00 39.39 3.79
467 468 3.434299 GTGTTGGTTACATGGTACTTCGG 59.566 47.826 0.00 0.00 39.39 4.30
468 469 3.004862 GTTGGTTACATGGTACTTCGGG 58.995 50.000 0.00 0.00 0.00 5.14
469 470 1.065998 TGGTTACATGGTACTTCGGGC 60.066 52.381 0.00 0.00 0.00 6.13
470 471 1.283736 GTTACATGGTACTTCGGGCG 58.716 55.000 0.00 0.00 0.00 6.13
471 472 0.896923 TTACATGGTACTTCGGGCGT 59.103 50.000 0.00 0.00 0.00 5.68
472 473 0.896923 TACATGGTACTTCGGGCGTT 59.103 50.000 0.00 0.00 0.00 4.84
480 481 4.036734 TGGTACTTCGGGCGTTAACTATAG 59.963 45.833 3.71 0.00 0.00 1.31
481 482 4.036852 GGTACTTCGGGCGTTAACTATAGT 59.963 45.833 0.00 0.00 0.00 2.12
502 503 2.553911 TTTTAGGGTATTTGGGGGCC 57.446 50.000 0.00 0.00 0.00 5.80
505 506 0.930726 TAGGGTATTTGGGGGCCAAG 59.069 55.000 4.39 0.00 44.84 3.61
530 531 8.984855 AGTATAGTATTTTGTGGCCTAAGTGTA 58.015 33.333 3.32 0.00 0.00 2.90
531 532 9.038803 GTATAGTATTTTGTGGCCTAAGTGTAC 57.961 37.037 3.32 1.02 0.00 2.90
532 533 5.871834 AGTATTTTGTGGCCTAAGTGTACA 58.128 37.500 3.32 0.00 0.00 2.90
533 534 5.704053 AGTATTTTGTGGCCTAAGTGTACAC 59.296 40.000 18.56 18.56 0.00 2.90
541 542 5.183140 GTGGCCTAAGTGTACACATGAAATT 59.817 40.000 27.06 13.90 32.58 1.82
579 580 6.325545 ACATAATTGGATGATTGCTCATTGGT 59.674 34.615 0.00 0.00 42.27 3.67
591 592 2.095059 GCTCATTGGTAGTGCTTGTTGG 60.095 50.000 0.00 0.00 0.00 3.77
592 593 3.149196 CTCATTGGTAGTGCTTGTTGGT 58.851 45.455 0.00 0.00 0.00 3.67
712 758 5.002464 AGTTGTATGAATGCCAAATGCTC 57.998 39.130 0.00 0.00 42.00 4.26
729 779 7.116090 CCAAATGCTCACGAATTTGTTATTTCA 59.884 33.333 0.00 0.00 42.34 2.69
795 856 0.934496 TGTACAGTGCTTGCGTGAAC 59.066 50.000 0.00 0.00 0.00 3.18
796 857 0.111266 GTACAGTGCTTGCGTGAACG 60.111 55.000 0.00 0.00 43.27 3.95
836 897 1.770658 TGAGTGGCTGATATTGGAGGG 59.229 52.381 0.00 0.00 0.00 4.30
837 898 1.072965 GAGTGGCTGATATTGGAGGGG 59.927 57.143 0.00 0.00 0.00 4.79
879 952 1.261619 CACCTCGCAAAGTCACTGAAC 59.738 52.381 0.00 0.00 0.00 3.18
904 980 0.673985 TCCGCGATGGATACCTCTTG 59.326 55.000 8.23 0.00 43.74 3.02
910 986 3.583806 CGATGGATACCTCTTGCTGATC 58.416 50.000 0.00 0.00 0.00 2.92
911 987 3.616076 CGATGGATACCTCTTGCTGATCC 60.616 52.174 0.00 0.00 37.23 3.36
912 988 2.050144 TGGATACCTCTTGCTGATCCC 58.950 52.381 0.00 0.00 36.08 3.85
913 989 1.001406 GGATACCTCTTGCTGATCCCG 59.999 57.143 0.00 0.00 31.57 5.14
914 990 0.394565 ATACCTCTTGCTGATCCCGC 59.605 55.000 0.00 0.00 0.00 6.13
915 991 0.975556 TACCTCTTGCTGATCCCGCA 60.976 55.000 2.95 2.95 35.22 5.69
916 992 1.147824 CCTCTTGCTGATCCCGCAT 59.852 57.895 7.50 0.00 37.22 4.73
917 993 0.883814 CCTCTTGCTGATCCCGCATC 60.884 60.000 7.50 0.00 37.22 3.91
918 994 0.883814 CTCTTGCTGATCCCGCATCC 60.884 60.000 7.50 0.00 37.22 3.51
919 995 1.895707 CTTGCTGATCCCGCATCCC 60.896 63.158 7.50 0.00 37.22 3.85
920 996 2.335092 CTTGCTGATCCCGCATCCCT 62.335 60.000 7.50 0.00 37.22 4.20
921 997 1.053835 TTGCTGATCCCGCATCCCTA 61.054 55.000 7.50 0.00 37.22 3.53
922 998 1.004440 GCTGATCCCGCATCCCTAC 60.004 63.158 0.00 0.00 0.00 3.18
923 999 1.758440 GCTGATCCCGCATCCCTACA 61.758 60.000 0.00 0.00 0.00 2.74
924 1000 0.034059 CTGATCCCGCATCCCTACAC 59.966 60.000 0.00 0.00 0.00 2.90
951 1027 2.681421 GCTTGCCCCTTTCCCTGG 60.681 66.667 0.00 0.00 0.00 4.45
1029 1123 1.080434 GTCTGCTTTCGAGGAGCGT 60.080 57.895 15.34 0.00 43.02 5.07
1650 1758 2.031682 GGCAGCACAAAACTGACTAGTG 60.032 50.000 0.00 0.00 40.23 2.74
1740 1859 1.873591 GGGCTAGCGGACAATAACATG 59.126 52.381 9.00 0.00 0.00 3.21
1742 1861 2.484770 GGCTAGCGGACAATAACATGGA 60.485 50.000 9.00 0.00 0.00 3.41
1775 1899 6.924111 AGTGTTAATTCTAGGCAAATGTTGG 58.076 36.000 0.00 0.00 0.00 3.77
1810 1934 2.698855 ATGGATGAGTTTCGTGGGAG 57.301 50.000 0.00 0.00 0.00 4.30
1813 1937 1.405661 GGATGAGTTTCGTGGGAGGAC 60.406 57.143 0.00 0.00 0.00 3.85
1841 1965 1.271163 GCCACTTGCACCCTTACTACA 60.271 52.381 0.00 0.00 40.77 2.74
1865 1991 8.070171 ACAGATGAAACGAACTTTAAATGTCTG 58.930 33.333 0.00 0.00 0.00 3.51
2015 2146 9.399797 TGTAATTCAAATGCTAGATGATCAACT 57.600 29.630 10.62 10.62 0.00 3.16
2027 2158 3.281727 TGATCAACTGCTAACCCATCC 57.718 47.619 0.00 0.00 0.00 3.51
2075 2206 2.872245 CTCGGCTTCTCTCTCTAGACTG 59.128 54.545 0.00 0.00 0.00 3.51
2076 2207 1.946768 CGGCTTCTCTCTCTAGACTGG 59.053 57.143 0.00 0.00 0.00 4.00
2077 2208 2.420827 CGGCTTCTCTCTCTAGACTGGA 60.421 54.545 0.00 0.00 0.00 3.86
2078 2209 3.747388 CGGCTTCTCTCTCTAGACTGGAT 60.747 52.174 0.00 0.00 0.00 3.41
2079 2210 3.569701 GGCTTCTCTCTCTAGACTGGATG 59.430 52.174 0.00 0.00 0.00 3.51
2080 2211 3.569701 GCTTCTCTCTCTAGACTGGATGG 59.430 52.174 0.00 0.00 0.00 3.51
2081 2212 4.792068 CTTCTCTCTCTAGACTGGATGGT 58.208 47.826 0.00 0.00 0.00 3.55
2082 2213 4.163441 TCTCTCTCTAGACTGGATGGTG 57.837 50.000 0.00 0.00 0.00 4.17
2083 2214 3.525609 TCTCTCTCTAGACTGGATGGTGT 59.474 47.826 0.00 0.00 0.00 4.16
2084 2215 4.722279 TCTCTCTCTAGACTGGATGGTGTA 59.278 45.833 0.00 0.00 0.00 2.90
2085 2216 5.191921 TCTCTCTCTAGACTGGATGGTGTAA 59.808 44.000 0.00 0.00 0.00 2.41
2086 2217 6.019656 TCTCTCTAGACTGGATGGTGTAAT 57.980 41.667 0.00 0.00 0.00 1.89
2087 2218 7.072581 TCTCTCTCTAGACTGGATGGTGTAATA 59.927 40.741 0.00 0.00 0.00 0.98
2088 2219 7.227873 TCTCTCTAGACTGGATGGTGTAATAG 58.772 42.308 0.00 0.00 0.00 1.73
2089 2220 5.770663 TCTCTAGACTGGATGGTGTAATAGC 59.229 44.000 0.00 0.00 0.00 2.97
2100 2231 7.148086 TGGATGGTGTAATAGCAAGATGTTTTC 60.148 37.037 0.00 0.00 40.70 2.29
2134 2410 5.374071 TGGTTCTTCTTGTTCTTACTTCCC 58.626 41.667 0.00 0.00 0.00 3.97
2168 2444 3.217681 TGTAGGACAGGTTGTTTTCCC 57.782 47.619 0.00 0.00 0.00 3.97
2198 2474 5.424121 AACCAAAAGTCGTCTGAATTCTG 57.576 39.130 7.05 6.50 29.70 3.02
2246 2523 3.412386 AGTAAGTTGGATGTGCCTGAAC 58.588 45.455 0.00 0.00 37.63 3.18
2250 2527 3.347216 AGTTGGATGTGCCTGAACATAC 58.653 45.455 0.00 0.00 40.87 2.39
2290 2567 7.550196 CCATTTTCTTCTTAATGAACCCCATTG 59.450 37.037 0.00 0.00 44.67 2.82
2309 2586 1.512735 GGAGGTTCTCCCCTATGCTT 58.487 55.000 2.65 0.00 44.36 3.91
2367 2644 6.293407 GGGTTTTCTCTTTTTAATTGGCTTGC 60.293 38.462 0.00 0.00 0.00 4.01
2370 2647 8.987890 GTTTTCTCTTTTTAATTGGCTTGCATA 58.012 29.630 0.00 0.00 0.00 3.14
2397 2674 7.924541 TGAATTACACCAGGGTTATTTACTCT 58.075 34.615 0.00 0.00 38.43 3.24
2473 2750 7.940850 TCTTTCTTGCTAATTTAGTTGCACTT 58.059 30.769 5.38 0.00 35.01 3.16
2627 2904 4.231439 GTTTCTGTTGGTTTCGTGTTTGT 58.769 39.130 0.00 0.00 0.00 2.83
2628 2905 5.392286 GTTTCTGTTGGTTTCGTGTTTGTA 58.608 37.500 0.00 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.659089 TTAGCTCCTTCGGTGCGGC 62.659 63.158 0.00 0.00 45.53 6.53
4 5 2.100916 TGTATCTTAGCTCCTTCGGTGC 59.899 50.000 0.00 0.00 41.85 5.01
5 6 4.113354 GTTGTATCTTAGCTCCTTCGGTG 58.887 47.826 0.00 0.00 0.00 4.94
6 7 3.181489 CGTTGTATCTTAGCTCCTTCGGT 60.181 47.826 0.00 0.00 0.00 4.69
7 8 3.372954 CGTTGTATCTTAGCTCCTTCGG 58.627 50.000 0.00 0.00 0.00 4.30
8 9 2.789893 GCGTTGTATCTTAGCTCCTTCG 59.210 50.000 0.00 0.00 0.00 3.79
9 10 2.789893 CGCGTTGTATCTTAGCTCCTTC 59.210 50.000 0.00 0.00 0.00 3.46
10 11 2.481449 CCGCGTTGTATCTTAGCTCCTT 60.481 50.000 4.92 0.00 0.00 3.36
11 12 1.067212 CCGCGTTGTATCTTAGCTCCT 59.933 52.381 4.92 0.00 0.00 3.69
12 13 1.202382 ACCGCGTTGTATCTTAGCTCC 60.202 52.381 4.92 0.00 0.00 4.70
14 15 1.533338 CGACCGCGTTGTATCTTAGCT 60.533 52.381 4.92 0.00 0.00 3.32
15 16 0.844503 CGACCGCGTTGTATCTTAGC 59.155 55.000 4.92 0.00 0.00 3.09
27 28 2.235536 GAATGGAAACCACGACCGCG 62.236 60.000 0.00 0.00 44.79 6.46
28 29 1.500396 GAATGGAAACCACGACCGC 59.500 57.895 0.00 0.00 35.80 5.68
29 30 1.785321 CGAATGGAAACCACGACCG 59.215 57.895 0.00 0.00 35.80 4.79
30 31 1.500396 GCGAATGGAAACCACGACC 59.500 57.895 0.00 0.00 35.80 4.79
31 32 0.953960 AGGCGAATGGAAACCACGAC 60.954 55.000 0.00 0.00 35.80 4.34
32 33 0.609151 TAGGCGAATGGAAACCACGA 59.391 50.000 0.00 0.00 35.80 4.35
33 34 1.444836 TTAGGCGAATGGAAACCACG 58.555 50.000 0.00 0.00 35.80 4.94
34 35 2.357952 GGATTAGGCGAATGGAAACCAC 59.642 50.000 0.00 0.00 35.80 4.16
35 36 2.650322 GGATTAGGCGAATGGAAACCA 58.350 47.619 0.00 0.00 38.19 3.67
36 37 1.602377 CGGATTAGGCGAATGGAAACC 59.398 52.381 0.00 0.00 0.00 3.27
37 38 2.285977 ACGGATTAGGCGAATGGAAAC 58.714 47.619 0.00 0.00 0.00 2.78
38 39 2.557317 GACGGATTAGGCGAATGGAAA 58.443 47.619 0.00 0.00 0.00 3.13
39 40 1.202604 GGACGGATTAGGCGAATGGAA 60.203 52.381 0.00 0.00 0.00 3.53
40 41 0.391597 GGACGGATTAGGCGAATGGA 59.608 55.000 0.00 0.00 0.00 3.41
41 42 0.602905 GGGACGGATTAGGCGAATGG 60.603 60.000 0.00 0.00 0.00 3.16
42 43 0.105964 TGGGACGGATTAGGCGAATG 59.894 55.000 0.00 0.00 0.00 2.67
43 44 0.106149 GTGGGACGGATTAGGCGAAT 59.894 55.000 0.00 0.00 0.00 3.34
44 45 1.518774 GTGGGACGGATTAGGCGAA 59.481 57.895 0.00 0.00 0.00 4.70
45 46 2.777972 CGTGGGACGGATTAGGCGA 61.778 63.158 0.00 0.00 38.08 5.54
46 47 2.083835 ATCGTGGGACGGATTAGGCG 62.084 60.000 0.00 0.00 42.81 5.52
47 48 0.106149 AATCGTGGGACGGATTAGGC 59.894 55.000 0.00 0.00 42.81 3.93
48 49 1.687123 AGAATCGTGGGACGGATTAGG 59.313 52.381 0.00 0.00 42.81 2.69
49 50 3.305199 GGTAGAATCGTGGGACGGATTAG 60.305 52.174 0.00 0.00 42.81 1.73
50 51 2.624838 GGTAGAATCGTGGGACGGATTA 59.375 50.000 0.00 0.00 42.81 1.75
51 52 1.411612 GGTAGAATCGTGGGACGGATT 59.588 52.381 0.00 0.00 42.81 3.01
52 53 1.038280 GGTAGAATCGTGGGACGGAT 58.962 55.000 0.00 0.00 42.81 4.18
53 54 1.378882 CGGTAGAATCGTGGGACGGA 61.379 60.000 0.00 0.00 42.81 4.69
54 55 1.065273 CGGTAGAATCGTGGGACGG 59.935 63.158 0.00 0.00 42.81 4.79
55 56 1.805254 ACGGTAGAATCGTGGGACG 59.195 57.895 0.00 0.00 44.19 4.79
61 62 4.397103 TGTGTATCTTCACGGTAGAATCGT 59.603 41.667 0.00 0.00 40.74 3.73
62 63 4.916870 TGTGTATCTTCACGGTAGAATCG 58.083 43.478 0.00 0.00 40.74 3.34
63 64 8.867112 TTTATGTGTATCTTCACGGTAGAATC 57.133 34.615 0.00 0.00 40.74 2.52
65 66 9.740239 GTATTTATGTGTATCTTCACGGTAGAA 57.260 33.333 0.00 0.00 40.74 2.10
66 67 9.128404 AGTATTTATGTGTATCTTCACGGTAGA 57.872 33.333 0.00 0.00 40.74 2.59
67 68 9.395707 GAGTATTTATGTGTATCTTCACGGTAG 57.604 37.037 0.00 0.00 40.74 3.18
68 69 8.905850 TGAGTATTTATGTGTATCTTCACGGTA 58.094 33.333 0.00 0.00 40.74 4.02
69 70 7.778083 TGAGTATTTATGTGTATCTTCACGGT 58.222 34.615 0.00 0.00 40.74 4.83
70 71 8.135529 TCTGAGTATTTATGTGTATCTTCACGG 58.864 37.037 0.00 0.00 40.74 4.94
71 72 9.516314 TTCTGAGTATTTATGTGTATCTTCACG 57.484 33.333 0.00 0.00 40.74 4.35
76 77 9.823647 CCAACTTCTGAGTATTTATGTGTATCT 57.176 33.333 0.00 0.00 34.21 1.98
77 78 9.817809 TCCAACTTCTGAGTATTTATGTGTATC 57.182 33.333 0.00 0.00 34.21 2.24
80 81 8.950210 CATTCCAACTTCTGAGTATTTATGTGT 58.050 33.333 0.00 0.00 34.21 3.72
81 82 9.166173 TCATTCCAACTTCTGAGTATTTATGTG 57.834 33.333 0.00 0.00 34.21 3.21
82 83 9.388506 CTCATTCCAACTTCTGAGTATTTATGT 57.611 33.333 0.00 0.00 34.21 2.29
83 84 8.834465 CCTCATTCCAACTTCTGAGTATTTATG 58.166 37.037 0.00 0.00 34.21 1.90
84 85 7.500559 GCCTCATTCCAACTTCTGAGTATTTAT 59.499 37.037 0.00 0.00 34.21 1.40
85 86 6.823689 GCCTCATTCCAACTTCTGAGTATTTA 59.176 38.462 0.00 0.00 34.21 1.40
86 87 5.649831 GCCTCATTCCAACTTCTGAGTATTT 59.350 40.000 0.00 0.00 34.21 1.40
87 88 5.045286 AGCCTCATTCCAACTTCTGAGTATT 60.045 40.000 0.00 0.00 34.21 1.89
88 89 4.472833 AGCCTCATTCCAACTTCTGAGTAT 59.527 41.667 0.00 0.00 34.21 2.12
89 90 3.840666 AGCCTCATTCCAACTTCTGAGTA 59.159 43.478 0.00 0.00 34.21 2.59
90 91 2.641815 AGCCTCATTCCAACTTCTGAGT 59.358 45.455 0.00 0.00 37.87 3.41
91 92 3.347077 AGCCTCATTCCAACTTCTGAG 57.653 47.619 0.00 0.00 35.88 3.35
92 93 3.795688 AAGCCTCATTCCAACTTCTGA 57.204 42.857 0.00 0.00 0.00 3.27
93 94 3.822735 TGAAAGCCTCATTCCAACTTCTG 59.177 43.478 0.00 0.00 0.00 3.02
94 95 3.823304 GTGAAAGCCTCATTCCAACTTCT 59.177 43.478 0.00 0.00 36.14 2.85
95 96 3.823304 AGTGAAAGCCTCATTCCAACTTC 59.177 43.478 0.00 0.00 36.14 3.01
96 97 3.837355 AGTGAAAGCCTCATTCCAACTT 58.163 40.909 0.00 0.00 36.14 2.66
97 98 3.515602 AGTGAAAGCCTCATTCCAACT 57.484 42.857 0.00 0.00 36.14 3.16
98 99 4.590850 AAAGTGAAAGCCTCATTCCAAC 57.409 40.909 0.00 0.00 36.14 3.77
99 100 5.612725 AAAAAGTGAAAGCCTCATTCCAA 57.387 34.783 0.00 0.00 36.14 3.53
118 119 6.248433 AGCCTCATTCTATTCACAGGAAAAA 58.752 36.000 0.00 0.00 36.43 1.94
119 120 5.819991 AGCCTCATTCTATTCACAGGAAAA 58.180 37.500 0.00 0.00 36.43 2.29
120 121 5.441718 AGCCTCATTCTATTCACAGGAAA 57.558 39.130 0.00 0.00 36.43 3.13
121 122 5.441718 AAGCCTCATTCTATTCACAGGAA 57.558 39.130 0.00 0.00 37.45 3.36
122 123 5.045651 TGAAAGCCTCATTCTATTCACAGGA 60.046 40.000 0.00 0.00 0.00 3.86
123 124 5.188434 TGAAAGCCTCATTCTATTCACAGG 58.812 41.667 0.00 0.00 0.00 4.00
124 125 6.939132 ATGAAAGCCTCATTCTATTCACAG 57.061 37.500 0.00 0.00 42.46 3.66
149 150 9.515020 CCGTGCATATTTGAAACAATTACTATT 57.485 29.630 0.00 0.00 0.00 1.73
150 151 8.134895 CCCGTGCATATTTGAAACAATTACTAT 58.865 33.333 0.00 0.00 0.00 2.12
151 152 7.415765 CCCCGTGCATATTTGAAACAATTACTA 60.416 37.037 0.00 0.00 0.00 1.82
152 153 6.329496 CCCGTGCATATTTGAAACAATTACT 58.671 36.000 0.00 0.00 0.00 2.24
153 154 5.518487 CCCCGTGCATATTTGAAACAATTAC 59.482 40.000 0.00 0.00 0.00 1.89
154 155 5.394663 CCCCCGTGCATATTTGAAACAATTA 60.395 40.000 0.00 0.00 0.00 1.40
155 156 4.502962 CCCCGTGCATATTTGAAACAATT 58.497 39.130 0.00 0.00 0.00 2.32
156 157 3.118811 CCCCCGTGCATATTTGAAACAAT 60.119 43.478 0.00 0.00 0.00 2.71
157 158 2.232452 CCCCCGTGCATATTTGAAACAA 59.768 45.455 0.00 0.00 0.00 2.83
158 159 1.821753 CCCCCGTGCATATTTGAAACA 59.178 47.619 0.00 0.00 0.00 2.83
159 160 1.822371 ACCCCCGTGCATATTTGAAAC 59.178 47.619 0.00 0.00 0.00 2.78
160 161 2.223803 ACCCCCGTGCATATTTGAAA 57.776 45.000 0.00 0.00 0.00 2.69
161 162 2.026169 TGTACCCCCGTGCATATTTGAA 60.026 45.455 0.00 0.00 28.65 2.69
162 163 1.560146 TGTACCCCCGTGCATATTTGA 59.440 47.619 0.00 0.00 28.65 2.69
163 164 2.045561 TGTACCCCCGTGCATATTTG 57.954 50.000 0.00 0.00 28.65 2.32
164 165 2.582052 CATGTACCCCCGTGCATATTT 58.418 47.619 0.00 0.00 42.67 1.40
165 166 1.202879 CCATGTACCCCCGTGCATATT 60.203 52.381 0.00 0.00 42.67 1.28
166 167 0.400213 CCATGTACCCCCGTGCATAT 59.600 55.000 0.00 0.00 42.67 1.78
167 168 0.983905 ACCATGTACCCCCGTGCATA 60.984 55.000 0.00 0.00 42.67 3.14
168 169 1.858739 AACCATGTACCCCCGTGCAT 61.859 55.000 0.00 0.00 45.06 3.96
169 170 2.472414 GAACCATGTACCCCCGTGCA 62.472 60.000 0.00 0.00 39.06 4.57
170 171 1.747745 GAACCATGTACCCCCGTGC 60.748 63.158 0.00 0.00 0.00 5.34
171 172 0.392461 CAGAACCATGTACCCCCGTG 60.392 60.000 0.00 0.00 0.00 4.94
172 173 1.988015 CAGAACCATGTACCCCCGT 59.012 57.895 0.00 0.00 0.00 5.28
173 174 1.451387 GCAGAACCATGTACCCCCG 60.451 63.158 0.00 0.00 0.00 5.73
174 175 0.394352 CTGCAGAACCATGTACCCCC 60.394 60.000 8.42 0.00 0.00 5.40
175 176 0.394352 CCTGCAGAACCATGTACCCC 60.394 60.000 17.39 0.00 0.00 4.95
176 177 0.328258 ACCTGCAGAACCATGTACCC 59.672 55.000 17.39 0.00 0.00 3.69
177 178 2.084546 GAACCTGCAGAACCATGTACC 58.915 52.381 17.39 0.00 0.00 3.34
178 179 3.059352 AGAACCTGCAGAACCATGTAC 57.941 47.619 17.39 0.00 0.00 2.90
179 180 3.838317 ACTAGAACCTGCAGAACCATGTA 59.162 43.478 17.39 0.00 0.00 2.29
180 181 2.639839 ACTAGAACCTGCAGAACCATGT 59.360 45.455 17.39 0.00 0.00 3.21
181 182 3.340814 ACTAGAACCTGCAGAACCATG 57.659 47.619 17.39 0.00 0.00 3.66
182 183 5.700402 ATTACTAGAACCTGCAGAACCAT 57.300 39.130 17.39 0.00 0.00 3.55
183 184 5.248477 AGAATTACTAGAACCTGCAGAACCA 59.752 40.000 17.39 0.00 0.00 3.67
184 185 5.735766 AGAATTACTAGAACCTGCAGAACC 58.264 41.667 17.39 3.03 0.00 3.62
185 186 6.635755 AGAGAATTACTAGAACCTGCAGAAC 58.364 40.000 17.39 5.96 0.00 3.01
186 187 6.437477 TGAGAGAATTACTAGAACCTGCAGAA 59.563 38.462 17.39 0.00 0.00 3.02
187 188 5.952347 TGAGAGAATTACTAGAACCTGCAGA 59.048 40.000 17.39 0.00 0.00 4.26
188 189 6.039616 GTGAGAGAATTACTAGAACCTGCAG 58.960 44.000 6.78 6.78 0.00 4.41
189 190 5.717178 AGTGAGAGAATTACTAGAACCTGCA 59.283 40.000 0.00 0.00 0.00 4.41
190 191 6.215495 AGTGAGAGAATTACTAGAACCTGC 57.785 41.667 0.00 0.00 0.00 4.85
191 192 8.514330 ACTAGTGAGAGAATTACTAGAACCTG 57.486 38.462 15.94 0.00 44.09 4.00
192 193 7.776500 GGACTAGTGAGAGAATTACTAGAACCT 59.224 40.741 15.94 0.00 44.09 3.50
193 194 7.556996 TGGACTAGTGAGAGAATTACTAGAACC 59.443 40.741 15.94 16.38 44.09 3.62
194 195 8.508883 TGGACTAGTGAGAGAATTACTAGAAC 57.491 38.462 15.94 9.95 44.09 3.01
195 196 8.549731 TCTGGACTAGTGAGAGAATTACTAGAA 58.450 37.037 15.94 4.28 44.09 2.10
196 197 8.091952 TCTGGACTAGTGAGAGAATTACTAGA 57.908 38.462 15.94 0.00 44.09 2.43
197 198 8.918202 ATCTGGACTAGTGAGAGAATTACTAG 57.082 38.462 0.00 9.75 45.81 2.57
198 199 8.495260 TGATCTGGACTAGTGAGAGAATTACTA 58.505 37.037 0.00 0.00 0.00 1.82
199 200 7.284489 GTGATCTGGACTAGTGAGAGAATTACT 59.716 40.741 0.00 0.00 0.00 2.24
200 201 7.067615 TGTGATCTGGACTAGTGAGAGAATTAC 59.932 40.741 0.00 1.23 0.00 1.89
201 202 7.067615 GTGTGATCTGGACTAGTGAGAGAATTA 59.932 40.741 0.00 0.00 0.00 1.40
202 203 5.954752 TGTGATCTGGACTAGTGAGAGAATT 59.045 40.000 0.00 0.00 0.00 2.17
203 204 5.359576 GTGTGATCTGGACTAGTGAGAGAAT 59.640 44.000 0.00 0.00 0.00 2.40
204 205 4.702612 GTGTGATCTGGACTAGTGAGAGAA 59.297 45.833 0.00 0.00 0.00 2.87
205 206 4.263506 TGTGTGATCTGGACTAGTGAGAGA 60.264 45.833 0.00 0.00 0.00 3.10
206 207 4.013050 TGTGTGATCTGGACTAGTGAGAG 58.987 47.826 0.00 0.00 0.00 3.20
207 208 3.759086 GTGTGTGATCTGGACTAGTGAGA 59.241 47.826 0.00 1.41 0.00 3.27
208 209 3.507622 TGTGTGTGATCTGGACTAGTGAG 59.492 47.826 0.00 0.00 0.00 3.51
209 210 3.496331 TGTGTGTGATCTGGACTAGTGA 58.504 45.455 0.00 0.00 0.00 3.41
210 211 3.942130 TGTGTGTGATCTGGACTAGTG 57.058 47.619 0.00 0.00 0.00 2.74
211 212 3.449018 GGATGTGTGTGATCTGGACTAGT 59.551 47.826 0.00 0.00 0.00 2.57
212 213 3.489908 CGGATGTGTGTGATCTGGACTAG 60.490 52.174 0.00 0.00 0.00 2.57
213 214 2.427095 CGGATGTGTGTGATCTGGACTA 59.573 50.000 0.00 0.00 0.00 2.59
214 215 1.205655 CGGATGTGTGTGATCTGGACT 59.794 52.381 0.00 0.00 0.00 3.85
215 216 1.204704 TCGGATGTGTGTGATCTGGAC 59.795 52.381 0.00 0.00 0.00 4.02
216 217 1.555967 TCGGATGTGTGTGATCTGGA 58.444 50.000 0.00 0.00 0.00 3.86
217 218 2.609427 ATCGGATGTGTGTGATCTGG 57.391 50.000 0.00 0.00 0.00 3.86
218 219 6.018589 ACTATATCGGATGTGTGTGATCTG 57.981 41.667 0.00 0.00 0.00 2.90
219 220 6.715264 TGTACTATATCGGATGTGTGTGATCT 59.285 38.462 0.00 0.00 0.00 2.75
220 221 6.909909 TGTACTATATCGGATGTGTGTGATC 58.090 40.000 0.00 0.00 0.00 2.92
221 222 6.894339 TGTACTATATCGGATGTGTGTGAT 57.106 37.500 0.00 0.00 0.00 3.06
222 223 6.294508 CCATGTACTATATCGGATGTGTGTGA 60.295 42.308 0.00 0.00 0.00 3.58
223 224 5.863935 CCATGTACTATATCGGATGTGTGTG 59.136 44.000 0.00 0.00 0.00 3.82
224 225 5.538813 ACCATGTACTATATCGGATGTGTGT 59.461 40.000 0.00 1.23 0.00 3.72
225 226 6.025749 ACCATGTACTATATCGGATGTGTG 57.974 41.667 0.00 0.00 0.00 3.82
226 227 6.041637 ACAACCATGTACTATATCGGATGTGT 59.958 38.462 0.00 0.00 38.24 3.72
227 228 6.366061 CACAACCATGTACTATATCGGATGTG 59.634 42.308 0.00 0.00 39.76 3.21
228 229 6.455647 CACAACCATGTACTATATCGGATGT 58.544 40.000 0.00 0.00 37.82 3.06
229 230 5.348724 GCACAACCATGTACTATATCGGATG 59.651 44.000 0.00 0.00 37.82 3.51
230 231 5.011635 TGCACAACCATGTACTATATCGGAT 59.988 40.000 0.00 0.00 37.82 4.18
231 232 4.342665 TGCACAACCATGTACTATATCGGA 59.657 41.667 0.00 0.00 37.82 4.55
232 233 4.627058 TGCACAACCATGTACTATATCGG 58.373 43.478 0.00 0.00 37.82 4.18
233 234 5.753438 ACTTGCACAACCATGTACTATATCG 59.247 40.000 0.00 0.00 37.82 2.92
234 235 7.279981 TGAACTTGCACAACCATGTACTATATC 59.720 37.037 0.00 0.00 37.82 1.63
235 236 7.109501 TGAACTTGCACAACCATGTACTATAT 58.890 34.615 0.00 0.00 37.82 0.86
236 237 6.468543 TGAACTTGCACAACCATGTACTATA 58.531 36.000 0.00 0.00 37.82 1.31
237 238 5.312895 TGAACTTGCACAACCATGTACTAT 58.687 37.500 0.00 0.00 37.82 2.12
238 239 4.709250 TGAACTTGCACAACCATGTACTA 58.291 39.130 0.00 0.00 37.82 1.82
239 240 3.550820 TGAACTTGCACAACCATGTACT 58.449 40.909 0.00 0.00 37.82 2.73
240 241 3.563808 TCTGAACTTGCACAACCATGTAC 59.436 43.478 0.00 0.00 37.82 2.90
241 242 3.814625 TCTGAACTTGCACAACCATGTA 58.185 40.909 0.00 0.00 37.82 2.29
242 243 2.653726 TCTGAACTTGCACAACCATGT 58.346 42.857 0.00 0.00 41.61 3.21
243 244 3.253921 TGATCTGAACTTGCACAACCATG 59.746 43.478 0.00 0.00 0.00 3.66
244 245 3.254166 GTGATCTGAACTTGCACAACCAT 59.746 43.478 0.00 0.00 0.00 3.55
245 246 2.618241 GTGATCTGAACTTGCACAACCA 59.382 45.455 0.00 0.00 0.00 3.67
246 247 2.618241 TGTGATCTGAACTTGCACAACC 59.382 45.455 0.00 0.00 36.63 3.77
247 248 3.065233 TGTGTGATCTGAACTTGCACAAC 59.935 43.478 0.00 0.00 40.66 3.32
248 249 3.065233 GTGTGTGATCTGAACTTGCACAA 59.935 43.478 0.00 0.00 40.66 3.33
249 250 2.613595 GTGTGTGATCTGAACTTGCACA 59.386 45.455 0.00 0.00 37.16 4.57
250 251 2.613595 TGTGTGTGATCTGAACTTGCAC 59.386 45.455 0.00 0.00 0.00 4.57
251 252 2.613595 GTGTGTGTGATCTGAACTTGCA 59.386 45.455 0.00 0.00 0.00 4.08
252 253 2.613595 TGTGTGTGTGATCTGAACTTGC 59.386 45.455 0.00 0.00 0.00 4.01
253 254 3.622612 TGTGTGTGTGTGATCTGAACTTG 59.377 43.478 0.00 0.00 0.00 3.16
254 255 3.623060 GTGTGTGTGTGTGATCTGAACTT 59.377 43.478 0.00 0.00 0.00 2.66
255 256 3.198068 GTGTGTGTGTGTGATCTGAACT 58.802 45.455 0.00 0.00 0.00 3.01
256 257 2.033747 CGTGTGTGTGTGTGATCTGAAC 60.034 50.000 0.00 0.00 0.00 3.18
257 258 2.200899 CGTGTGTGTGTGTGATCTGAA 58.799 47.619 0.00 0.00 0.00 3.02
258 259 1.537990 CCGTGTGTGTGTGTGATCTGA 60.538 52.381 0.00 0.00 0.00 3.27
259 260 0.861185 CCGTGTGTGTGTGTGATCTG 59.139 55.000 0.00 0.00 0.00 2.90
260 261 0.249868 CCCGTGTGTGTGTGTGATCT 60.250 55.000 0.00 0.00 0.00 2.75
261 262 1.227999 CCCCGTGTGTGTGTGTGATC 61.228 60.000 0.00 0.00 0.00 2.92
262 263 1.227823 CCCCGTGTGTGTGTGTGAT 60.228 57.895 0.00 0.00 0.00 3.06
263 264 2.186602 AACCCCGTGTGTGTGTGTGA 62.187 55.000 0.00 0.00 0.00 3.58
264 265 1.747367 AACCCCGTGTGTGTGTGTG 60.747 57.895 0.00 0.00 0.00 3.82
265 266 1.747367 CAACCCCGTGTGTGTGTGT 60.747 57.895 0.00 0.00 0.00 3.72
266 267 1.747367 ACAACCCCGTGTGTGTGTG 60.747 57.895 0.00 0.00 0.00 3.82
267 268 1.747367 CACAACCCCGTGTGTGTGT 60.747 57.895 0.00 0.00 43.26 3.72
268 269 3.106552 CACAACCCCGTGTGTGTG 58.893 61.111 0.00 0.00 43.26 3.82
273 274 1.077357 TTGAAGCACAACCCCGTGT 60.077 52.632 0.00 0.00 39.19 4.49
274 275 3.834726 TTGAAGCACAACCCCGTG 58.165 55.556 0.00 0.00 40.00 4.94
281 282 2.485795 GCACCGGGTTGAAGCACAA 61.486 57.895 6.32 0.00 36.02 3.33
282 283 2.904866 GCACCGGGTTGAAGCACA 60.905 61.111 6.32 0.00 0.00 4.57
283 284 1.805428 AATGCACCGGGTTGAAGCAC 61.805 55.000 11.57 0.00 38.12 4.40
284 285 1.112315 AAATGCACCGGGTTGAAGCA 61.112 50.000 11.70 11.70 39.79 3.91
285 286 0.885196 TAAATGCACCGGGTTGAAGC 59.115 50.000 6.32 0.00 0.00 3.86
286 287 1.883275 TGTAAATGCACCGGGTTGAAG 59.117 47.619 6.32 0.00 0.00 3.02
287 288 1.982660 TGTAAATGCACCGGGTTGAA 58.017 45.000 6.32 0.00 0.00 2.69
288 289 1.982660 TTGTAAATGCACCGGGTTGA 58.017 45.000 6.32 0.00 0.00 3.18
289 290 4.647424 ATATTGTAAATGCACCGGGTTG 57.353 40.909 6.32 0.00 0.00 3.77
290 291 5.889289 ACTAATATTGTAAATGCACCGGGTT 59.111 36.000 6.32 0.00 0.00 4.11
291 292 5.442391 ACTAATATTGTAAATGCACCGGGT 58.558 37.500 6.32 0.00 0.00 5.28
292 293 6.385649 AACTAATATTGTAAATGCACCGGG 57.614 37.500 6.32 0.00 0.00 5.73
293 294 7.308348 CCCTAACTAATATTGTAAATGCACCGG 60.308 40.741 0.00 0.00 0.00 5.28
294 295 7.227910 ACCCTAACTAATATTGTAAATGCACCG 59.772 37.037 0.00 0.00 0.00 4.94
295 296 8.349983 CACCCTAACTAATATTGTAAATGCACC 58.650 37.037 0.00 0.00 0.00 5.01
296 297 8.349983 CCACCCTAACTAATATTGTAAATGCAC 58.650 37.037 0.00 0.00 0.00 4.57
297 298 8.056400 ACCACCCTAACTAATATTGTAAATGCA 58.944 33.333 0.00 0.00 0.00 3.96
298 299 8.349983 CACCACCCTAACTAATATTGTAAATGC 58.650 37.037 0.00 0.00 0.00 3.56
299 300 8.349983 GCACCACCCTAACTAATATTGTAAATG 58.650 37.037 0.00 0.00 0.00 2.32
300 301 8.056400 TGCACCACCCTAACTAATATTGTAAAT 58.944 33.333 0.00 0.00 0.00 1.40
301 302 7.403671 TGCACCACCCTAACTAATATTGTAAA 58.596 34.615 0.00 0.00 0.00 2.01
302 303 6.959904 TGCACCACCCTAACTAATATTGTAA 58.040 36.000 0.00 0.00 0.00 2.41
303 304 6.563037 TGCACCACCCTAACTAATATTGTA 57.437 37.500 0.00 0.00 0.00 2.41
304 305 5.444744 TGCACCACCCTAACTAATATTGT 57.555 39.130 0.00 0.00 0.00 2.71
305 306 6.959639 ATTGCACCACCCTAACTAATATTG 57.040 37.500 0.00 0.00 0.00 1.90
306 307 7.147742 CCAAATTGCACCACCCTAACTAATATT 60.148 37.037 0.00 0.00 0.00 1.28
307 308 6.323739 CCAAATTGCACCACCCTAACTAATAT 59.676 38.462 0.00 0.00 0.00 1.28
308 309 5.654650 CCAAATTGCACCACCCTAACTAATA 59.345 40.000 0.00 0.00 0.00 0.98
309 310 4.466015 CCAAATTGCACCACCCTAACTAAT 59.534 41.667 0.00 0.00 0.00 1.73
310 311 3.829601 CCAAATTGCACCACCCTAACTAA 59.170 43.478 0.00 0.00 0.00 2.24
311 312 3.181427 ACCAAATTGCACCACCCTAACTA 60.181 43.478 0.00 0.00 0.00 2.24
312 313 2.247358 CCAAATTGCACCACCCTAACT 58.753 47.619 0.00 0.00 0.00 2.24
313 314 1.967779 ACCAAATTGCACCACCCTAAC 59.032 47.619 0.00 0.00 0.00 2.34
314 315 2.390225 ACCAAATTGCACCACCCTAA 57.610 45.000 0.00 0.00 0.00 2.69
315 316 2.390225 AACCAAATTGCACCACCCTA 57.610 45.000 0.00 0.00 0.00 3.53
316 317 2.367241 GTTAACCAAATTGCACCACCCT 59.633 45.455 0.00 0.00 0.00 4.34
317 318 2.367241 AGTTAACCAAATTGCACCACCC 59.633 45.455 0.88 0.00 0.00 4.61
318 319 3.068873 TCAGTTAACCAAATTGCACCACC 59.931 43.478 0.88 0.00 0.00 4.61
319 320 4.314740 TCAGTTAACCAAATTGCACCAC 57.685 40.909 0.88 0.00 0.00 4.16
320 321 5.543507 AATCAGTTAACCAAATTGCACCA 57.456 34.783 0.88 0.00 0.00 4.17
321 322 9.248291 CATATAATCAGTTAACCAAATTGCACC 57.752 33.333 0.88 0.00 0.00 5.01
322 323 9.801873 ACATATAATCAGTTAACCAAATTGCAC 57.198 29.630 0.88 0.00 0.00 4.57
323 324 9.800433 CACATATAATCAGTTAACCAAATTGCA 57.200 29.630 0.88 0.00 0.00 4.08
324 325 9.248291 CCACATATAATCAGTTAACCAAATTGC 57.752 33.333 0.88 0.00 0.00 3.56
330 331 9.913310 TCATTTCCACATATAATCAGTTAACCA 57.087 29.630 0.88 0.00 0.00 3.67
336 337 8.355169 GCACAATCATTTCCACATATAATCAGT 58.645 33.333 0.00 0.00 0.00 3.41
337 338 8.573885 AGCACAATCATTTCCACATATAATCAG 58.426 33.333 0.00 0.00 0.00 2.90
338 339 8.467963 AGCACAATCATTTCCACATATAATCA 57.532 30.769 0.00 0.00 0.00 2.57
339 340 9.754382 AAAGCACAATCATTTCCACATATAATC 57.246 29.630 0.00 0.00 0.00 1.75
343 344 9.537192 CAATAAAGCACAATCATTTCCACATAT 57.463 29.630 0.00 0.00 0.00 1.78
344 345 8.747471 TCAATAAAGCACAATCATTTCCACATA 58.253 29.630 0.00 0.00 0.00 2.29
345 346 7.613585 TCAATAAAGCACAATCATTTCCACAT 58.386 30.769 0.00 0.00 0.00 3.21
346 347 6.990798 TCAATAAAGCACAATCATTTCCACA 58.009 32.000 0.00 0.00 0.00 4.17
347 348 6.035327 GCTCAATAAAGCACAATCATTTCCAC 59.965 38.462 0.00 0.00 42.05 4.02
348 349 6.071221 AGCTCAATAAAGCACAATCATTTCCA 60.071 34.615 0.00 0.00 45.00 3.53
349 350 6.335777 AGCTCAATAAAGCACAATCATTTCC 58.664 36.000 0.00 0.00 45.00 3.13
350 351 8.186821 AGTAGCTCAATAAAGCACAATCATTTC 58.813 33.333 0.00 0.00 45.00 2.17
351 352 8.059798 AGTAGCTCAATAAAGCACAATCATTT 57.940 30.769 0.00 0.00 45.00 2.32
352 353 7.337689 TGAGTAGCTCAATAAAGCACAATCATT 59.662 33.333 0.00 0.00 45.00 2.57
353 354 6.825213 TGAGTAGCTCAATAAAGCACAATCAT 59.175 34.615 0.00 0.00 45.00 2.45
354 355 6.092670 GTGAGTAGCTCAATAAAGCACAATCA 59.907 38.462 0.00 0.00 42.46 2.57
355 356 6.092670 TGTGAGTAGCTCAATAAAGCACAATC 59.907 38.462 0.00 0.00 42.46 2.67
356 357 5.939883 TGTGAGTAGCTCAATAAAGCACAAT 59.060 36.000 0.00 0.00 42.46 2.71
357 358 5.304778 TGTGAGTAGCTCAATAAAGCACAA 58.695 37.500 0.00 0.00 42.46 3.33
358 359 4.893608 TGTGAGTAGCTCAATAAAGCACA 58.106 39.130 0.00 0.00 42.46 4.57
359 360 5.390991 GGTTGTGAGTAGCTCAATAAAGCAC 60.391 44.000 0.00 0.00 42.46 4.40
360 361 4.695455 GGTTGTGAGTAGCTCAATAAAGCA 59.305 41.667 0.00 0.00 42.46 3.91
361 362 4.095036 GGGTTGTGAGTAGCTCAATAAAGC 59.905 45.833 0.00 5.96 42.46 3.51
362 363 4.636206 GGGGTTGTGAGTAGCTCAATAAAG 59.364 45.833 0.00 0.00 42.46 1.85
363 364 4.566907 GGGGGTTGTGAGTAGCTCAATAAA 60.567 45.833 0.00 0.00 42.46 1.40
364 365 3.054655 GGGGGTTGTGAGTAGCTCAATAA 60.055 47.826 0.00 0.00 42.46 1.40
365 366 2.504175 GGGGGTTGTGAGTAGCTCAATA 59.496 50.000 0.00 0.00 42.46 1.90
366 367 1.282157 GGGGGTTGTGAGTAGCTCAAT 59.718 52.381 0.00 0.00 42.46 2.57
367 368 0.690762 GGGGGTTGTGAGTAGCTCAA 59.309 55.000 0.00 0.00 42.46 3.02
368 369 1.541310 CGGGGGTTGTGAGTAGCTCA 61.541 60.000 0.00 0.00 38.25 4.26
369 370 1.218316 CGGGGGTTGTGAGTAGCTC 59.782 63.158 0.00 0.00 0.00 4.09
370 371 2.955881 GCGGGGGTTGTGAGTAGCT 61.956 63.158 0.00 0.00 0.00 3.32
371 372 2.436115 GCGGGGGTTGTGAGTAGC 60.436 66.667 0.00 0.00 0.00 3.58
372 373 2.240162 GAGGCGGGGGTTGTGAGTAG 62.240 65.000 0.00 0.00 0.00 2.57
373 374 2.203877 AGGCGGGGGTTGTGAGTA 60.204 61.111 0.00 0.00 0.00 2.59
374 375 3.637273 GAGGCGGGGGTTGTGAGT 61.637 66.667 0.00 0.00 0.00 3.41
375 376 4.410400 GGAGGCGGGGGTTGTGAG 62.410 72.222 0.00 0.00 0.00 3.51
389 390 3.801114 TCATCATCACAAGTACCGGAG 57.199 47.619 9.46 0.00 0.00 4.63
390 391 6.267699 AGAATATCATCATCACAAGTACCGGA 59.732 38.462 9.46 0.00 0.00 5.14
391 392 6.459066 AGAATATCATCATCACAAGTACCGG 58.541 40.000 0.00 0.00 0.00 5.28
392 393 7.953158 AAGAATATCATCATCACAAGTACCG 57.047 36.000 0.00 0.00 0.00 4.02
396 397 9.857656 ACCATAAAGAATATCATCATCACAAGT 57.142 29.630 0.00 0.00 0.00 3.16
398 399 9.070179 CCACCATAAAGAATATCATCATCACAA 57.930 33.333 0.00 0.00 0.00 3.33
399 400 8.439172 TCCACCATAAAGAATATCATCATCACA 58.561 33.333 0.00 0.00 0.00 3.58
400 401 8.853077 TCCACCATAAAGAATATCATCATCAC 57.147 34.615 0.00 0.00 0.00 3.06
401 402 9.865152 TTTCCACCATAAAGAATATCATCATCA 57.135 29.630 0.00 0.00 0.00 3.07
412 413 9.362151 ACTAGAACAAATTTCCACCATAAAGAA 57.638 29.630 0.00 0.00 0.00 2.52
413 414 8.934023 ACTAGAACAAATTTCCACCATAAAGA 57.066 30.769 0.00 0.00 0.00 2.52
418 419 9.838339 CTAGATACTAGAACAAATTTCCACCAT 57.162 33.333 0.00 0.00 0.00 3.55
419 420 8.265055 CCTAGATACTAGAACAAATTTCCACCA 58.735 37.037 0.00 0.00 0.00 4.17
420 421 8.265764 ACCTAGATACTAGAACAAATTTCCACC 58.734 37.037 0.00 0.00 0.00 4.61
421 422 9.099454 CACCTAGATACTAGAACAAATTTCCAC 57.901 37.037 0.00 0.00 0.00 4.02
422 423 8.822805 ACACCTAGATACTAGAACAAATTTCCA 58.177 33.333 0.00 0.00 0.00 3.53
423 424 9.668497 AACACCTAGATACTAGAACAAATTTCC 57.332 33.333 0.00 0.00 0.00 3.13
425 426 9.449719 CCAACACCTAGATACTAGAACAAATTT 57.550 33.333 0.00 0.00 0.00 1.82
426 427 8.603304 ACCAACACCTAGATACTAGAACAAATT 58.397 33.333 0.00 0.00 0.00 1.82
427 428 8.147244 ACCAACACCTAGATACTAGAACAAAT 57.853 34.615 0.00 0.00 0.00 2.32
428 429 7.549147 ACCAACACCTAGATACTAGAACAAA 57.451 36.000 0.00 0.00 0.00 2.83
429 430 7.549147 AACCAACACCTAGATACTAGAACAA 57.451 36.000 0.00 0.00 0.00 2.83
430 431 7.670979 TGTAACCAACACCTAGATACTAGAACA 59.329 37.037 0.00 0.00 31.43 3.18
431 432 8.059798 TGTAACCAACACCTAGATACTAGAAC 57.940 38.462 0.00 0.00 31.43 3.01
432 433 8.692710 CATGTAACCAACACCTAGATACTAGAA 58.307 37.037 0.00 0.00 42.09 2.10
433 434 7.287005 CCATGTAACCAACACCTAGATACTAGA 59.713 40.741 0.00 0.00 42.09 2.43
434 435 7.069578 ACCATGTAACCAACACCTAGATACTAG 59.930 40.741 0.00 0.00 42.09 2.57
435 436 6.899075 ACCATGTAACCAACACCTAGATACTA 59.101 38.462 0.00 0.00 42.09 1.82
436 437 5.724854 ACCATGTAACCAACACCTAGATACT 59.275 40.000 0.00 0.00 42.09 2.12
437 438 5.985911 ACCATGTAACCAACACCTAGATAC 58.014 41.667 0.00 0.00 42.09 2.24
438 439 6.899075 AGTACCATGTAACCAACACCTAGATA 59.101 38.462 0.00 0.00 42.09 1.98
439 440 5.724854 AGTACCATGTAACCAACACCTAGAT 59.275 40.000 0.00 0.00 42.09 1.98
440 441 5.088730 AGTACCATGTAACCAACACCTAGA 58.911 41.667 0.00 0.00 42.09 2.43
441 442 5.416271 AGTACCATGTAACCAACACCTAG 57.584 43.478 0.00 0.00 42.09 3.02
442 443 5.567224 CGAAGTACCATGTAACCAACACCTA 60.567 44.000 0.00 0.00 42.09 3.08
443 444 4.648651 GAAGTACCATGTAACCAACACCT 58.351 43.478 0.00 0.00 42.09 4.00
444 445 3.434299 CGAAGTACCATGTAACCAACACC 59.566 47.826 0.00 0.00 42.09 4.16
445 446 3.434299 CCGAAGTACCATGTAACCAACAC 59.566 47.826 0.00 0.00 42.09 3.32
446 447 3.557475 CCCGAAGTACCATGTAACCAACA 60.557 47.826 0.00 0.00 43.86 3.33
447 448 3.004862 CCCGAAGTACCATGTAACCAAC 58.995 50.000 0.00 0.00 0.00 3.77
448 449 2.616001 GCCCGAAGTACCATGTAACCAA 60.616 50.000 0.00 0.00 0.00 3.67
449 450 1.065998 GCCCGAAGTACCATGTAACCA 60.066 52.381 0.00 0.00 0.00 3.67
450 451 1.660167 GCCCGAAGTACCATGTAACC 58.340 55.000 0.00 0.00 0.00 2.85
451 452 1.283736 CGCCCGAAGTACCATGTAAC 58.716 55.000 0.00 0.00 0.00 2.50
452 453 0.896923 ACGCCCGAAGTACCATGTAA 59.103 50.000 0.00 0.00 0.00 2.41
453 454 0.896923 AACGCCCGAAGTACCATGTA 59.103 50.000 0.00 0.00 0.00 2.29
454 455 0.896923 TAACGCCCGAAGTACCATGT 59.103 50.000 0.00 0.00 0.00 3.21
455 456 1.662122 GTTAACGCCCGAAGTACCATG 59.338 52.381 0.00 0.00 0.00 3.66
456 457 1.551883 AGTTAACGCCCGAAGTACCAT 59.448 47.619 0.00 0.00 0.00 3.55
457 458 0.968405 AGTTAACGCCCGAAGTACCA 59.032 50.000 0.00 0.00 0.00 3.25
458 459 2.939460 TAGTTAACGCCCGAAGTACC 57.061 50.000 0.00 0.00 0.00 3.34
459 460 5.175090 ACTATAGTTAACGCCCGAAGTAC 57.825 43.478 0.00 0.00 0.00 2.73
460 461 5.835113 AACTATAGTTAACGCCCGAAGTA 57.165 39.130 16.60 0.00 36.32 2.24
461 462 4.725790 AACTATAGTTAACGCCCGAAGT 57.274 40.909 16.60 0.00 36.32 3.01
462 463 6.413018 AAAAACTATAGTTAACGCCCGAAG 57.587 37.500 18.31 0.00 37.25 3.79
487 488 1.153041 ACTTGGCCCCCAAATACCCT 61.153 55.000 0.00 0.00 43.44 4.34
488 489 0.632294 TACTTGGCCCCCAAATACCC 59.368 55.000 0.00 0.00 43.44 3.69
496 497 4.583073 CACAAAATACTATACTTGGCCCCC 59.417 45.833 0.00 0.00 0.00 5.40
502 503 8.612619 CACTTAGGCCACAAAATACTATACTTG 58.387 37.037 5.01 0.00 0.00 3.16
505 506 9.038803 GTACACTTAGGCCACAAAATACTATAC 57.961 37.037 5.01 0.00 0.00 1.47
521 522 5.415701 AGGCAATTTCATGTGTACACTTAGG 59.584 40.000 25.60 9.43 0.00 2.69
530 531 7.119992 TGTTACGTAATAGGCAATTTCATGTGT 59.880 33.333 11.86 0.00 0.00 3.72
531 532 7.468441 TGTTACGTAATAGGCAATTTCATGTG 58.532 34.615 11.86 0.00 0.00 3.21
532 533 7.618502 TGTTACGTAATAGGCAATTTCATGT 57.381 32.000 11.86 0.00 0.00 3.21
541 542 8.151596 TCATCCAATTATGTTACGTAATAGGCA 58.848 33.333 11.86 5.05 0.00 4.75
579 580 5.527951 TCGAATTTTGTACCAACAAGCACTA 59.472 36.000 0.00 0.00 45.99 2.74
623 624 9.507280 CAGTGTAAAGCATATCATTCGATTTTT 57.493 29.630 0.00 0.00 32.73 1.94
626 627 7.495606 TGACAGTGTAAAGCATATCATTCGATT 59.504 33.333 0.00 0.00 32.73 3.34
678 724 9.388506 GGCATTCATACAACTCTATAGCATTAT 57.611 33.333 0.00 0.00 0.00 1.28
688 734 5.002464 GCATTTGGCATTCATACAACTCT 57.998 39.130 0.00 0.00 43.97 3.24
755 805 4.081642 ACAATCTGTAGCGTATCACTGGTT 60.082 41.667 0.00 0.00 0.00 3.67
756 806 3.447586 ACAATCTGTAGCGTATCACTGGT 59.552 43.478 0.00 0.00 0.00 4.00
757 807 4.046938 ACAATCTGTAGCGTATCACTGG 57.953 45.455 0.00 0.00 0.00 4.00
766 816 2.881074 AGCACTGTACAATCTGTAGCG 58.119 47.619 0.00 0.00 32.84 4.26
796 857 2.010145 TTCTACATCCAACGCTCAGC 57.990 50.000 0.00 0.00 0.00 4.26
837 898 3.782244 CACTCACGCAGCGCCTTC 61.782 66.667 16.61 0.00 0.00 3.46
896 969 0.975556 TGCGGGATCAGCAAGAGGTA 60.976 55.000 11.92 0.00 42.18 3.08
904 980 1.004440 GTAGGGATGCGGGATCAGC 60.004 63.158 11.71 5.57 31.91 4.26
910 986 3.873812 GGGGTGTAGGGATGCGGG 61.874 72.222 0.00 0.00 0.00 6.13
911 987 3.873812 GGGGGTGTAGGGATGCGG 61.874 72.222 0.00 0.00 0.00 5.69
912 988 2.204865 TTTGGGGGTGTAGGGATGCG 62.205 60.000 0.00 0.00 0.00 4.73
913 989 0.683179 GTTTGGGGGTGTAGGGATGC 60.683 60.000 0.00 0.00 0.00 3.91
914 990 0.033503 GGTTTGGGGGTGTAGGGATG 60.034 60.000 0.00 0.00 0.00 3.51
915 991 1.568118 CGGTTTGGGGGTGTAGGGAT 61.568 60.000 0.00 0.00 0.00 3.85
916 992 2.225596 CGGTTTGGGGGTGTAGGGA 61.226 63.158 0.00 0.00 0.00 4.20
917 993 2.353573 CGGTTTGGGGGTGTAGGG 59.646 66.667 0.00 0.00 0.00 3.53
918 994 2.360726 GCGGTTTGGGGGTGTAGG 60.361 66.667 0.00 0.00 0.00 3.18
919 995 1.074248 AAGCGGTTTGGGGGTGTAG 59.926 57.895 0.00 0.00 0.00 2.74
920 996 1.228306 CAAGCGGTTTGGGGGTGTA 60.228 57.895 0.00 0.00 32.95 2.90
921 997 2.520741 CAAGCGGTTTGGGGGTGT 60.521 61.111 0.00 0.00 32.95 4.16
922 998 3.989787 GCAAGCGGTTTGGGGGTG 61.990 66.667 6.71 0.00 37.26 4.61
951 1027 1.066587 CGGGAGGTGAGATTCGCTC 59.933 63.158 0.00 0.00 44.21 5.03
996 1090 1.102154 CAGACGACAGCTCCATCTCT 58.898 55.000 0.00 0.00 0.00 3.10
998 1092 0.969917 AGCAGACGACAGCTCCATCT 60.970 55.000 0.00 0.00 33.74 2.90
1029 1123 2.038813 TCCTCCATCTGCCGGACA 59.961 61.111 5.05 1.09 0.00 4.02
1311 1407 0.683504 ACTCGTAGAAGCGGTCCCAT 60.684 55.000 0.00 0.00 34.09 4.00
1386 1482 0.598562 TCTGCACTTCCTGACGAGTC 59.401 55.000 0.00 0.00 0.00 3.36
1387 1483 0.600557 CTCTGCACTTCCTGACGAGT 59.399 55.000 0.00 0.00 0.00 4.18
1650 1758 4.460505 GTCGTTTTGCTTGTACCACATAC 58.539 43.478 0.00 0.00 0.00 2.39
1740 1859 8.182227 GCCTAGAATTAACACTACATTTGTTCC 58.818 37.037 0.00 0.00 38.21 3.62
1742 1861 8.630054 TGCCTAGAATTAACACTACATTTGTT 57.370 30.769 0.00 0.00 40.34 2.83
1775 1899 7.099120 ACTCATCCATTAGTTCAAAATTTGCC 58.901 34.615 0.00 0.00 0.00 4.52
1841 1965 7.078228 GCAGACATTTAAAGTTCGTTTCATCT 58.922 34.615 0.00 0.00 0.00 2.90
1865 1991 3.515330 AAAAAGCATGTATCTGCCTGC 57.485 42.857 0.00 0.00 43.33 4.85
2000 2131 4.443457 GGGTTAGCAGTTGATCATCTAGCA 60.443 45.833 20.50 10.58 0.00 3.49
2015 2146 0.255890 GCCTCAAGGATGGGTTAGCA 59.744 55.000 0.00 0.00 37.39 3.49
2027 2158 0.321919 TAAGCTGCTGTGGCCTCAAG 60.322 55.000 9.14 5.58 37.74 3.02
2075 2206 6.699575 AAACATCTTGCTATTACACCATCC 57.300 37.500 0.00 0.00 0.00 3.51
2076 2207 7.067494 AGGAAAACATCTTGCTATTACACCATC 59.933 37.037 0.00 0.00 0.00 3.51
2077 2208 6.891908 AGGAAAACATCTTGCTATTACACCAT 59.108 34.615 0.00 0.00 0.00 3.55
2078 2209 6.245408 AGGAAAACATCTTGCTATTACACCA 58.755 36.000 0.00 0.00 0.00 4.17
2079 2210 6.759497 AGGAAAACATCTTGCTATTACACC 57.241 37.500 0.00 0.00 0.00 4.16
2080 2211 7.593825 ACAAGGAAAACATCTTGCTATTACAC 58.406 34.615 0.00 0.00 42.82 2.90
2081 2212 7.759489 ACAAGGAAAACATCTTGCTATTACA 57.241 32.000 0.00 0.00 42.82 2.41
2082 2213 7.062255 GCAACAAGGAAAACATCTTGCTATTAC 59.938 37.037 0.00 0.00 42.82 1.89
2083 2214 7.090173 GCAACAAGGAAAACATCTTGCTATTA 58.910 34.615 0.00 0.00 42.82 0.98
2084 2215 5.928264 GCAACAAGGAAAACATCTTGCTATT 59.072 36.000 0.00 0.00 42.82 1.73
2085 2216 5.010922 TGCAACAAGGAAAACATCTTGCTAT 59.989 36.000 0.00 0.00 42.82 2.97
2086 2217 4.340666 TGCAACAAGGAAAACATCTTGCTA 59.659 37.500 0.00 0.00 42.82 3.49
2087 2218 3.132646 TGCAACAAGGAAAACATCTTGCT 59.867 39.130 0.00 0.00 42.82 3.91
2088 2219 3.456280 TGCAACAAGGAAAACATCTTGC 58.544 40.909 0.00 0.00 42.82 4.01
2089 2220 5.049954 CCAATGCAACAAGGAAAACATCTTG 60.050 40.000 0.00 0.00 44.14 3.02
2100 2231 4.053295 CAAGAAGAACCAATGCAACAAGG 58.947 43.478 0.00 0.00 0.00 3.61
2157 2433 2.616376 GTTTGCAATGGGGAAAACAACC 59.384 45.455 0.00 0.00 38.63 3.77
2159 2435 2.924421 GGTTTGCAATGGGGAAAACAA 58.076 42.857 0.00 0.00 43.35 2.83
2168 2444 2.794350 GACGACTTTTGGTTTGCAATGG 59.206 45.455 0.00 0.00 0.00 3.16
2370 2647 9.185680 GAGTAAATAACCCTGGTGTAATTCATT 57.814 33.333 0.00 0.00 0.00 2.57
2473 2750 7.537715 CAATTGTCATTGTTCTACTGGCAATA 58.462 34.615 2.44 0.00 42.60 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.